Contig-U05501-1
Contig ID Contig-U05501-1
Contig update 2001. 8.30
Contig sequence
>Contig-U05501-1 (Contig-U05501-1Q) /CSM_Contig/Contig-U05501-1Q.Seq.d
AATAAATAACATAATATACTTAATAGCAACTTTTAGAAAAATGAGTAGGG
TTACTAATGTTTCTATAAATCCAAAATTAGATGAATTTTTAAAAGGTGCC
CAAGTAATTATAAATTTTGGAGCTGAATGGTGTGGTGCTTGCAAAGTTTT
GGAGCCAATTTTTAACAAATTAAGCACTCAATACCCTTTGGTAACATTTT
TAAAAGTTGAAATTGATAAAATAAATGTACATGAATCAACAAAATCAATA
ACAAGTATTCCAACAATTATGTTATACCAAAAGGGAAAAAAAACAAAAGA
AATTGTTTCACCAAACGAAACTCAACTTAGAAAAATTCTTGATTCAATGA
AATAAAATCAGAAATAAAAAGTTGTAGAGAACAATTAAAAAAAAAAAAAA
AACTAAAA

Gap no gap
Contig length 408
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 818879
End point 818469
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U05501
List of clone(s)

est1=SSJ134E,1,409
Translated Amino Acid sequence
INNIIYLIATFRKMSRVTNVSINPKLDEFLKGAQVIINFGAEWCGACKVLEPIFNKLSTQ
YPLVTFLKVEIDKINVHESTKSITSIPTIMLYQKGKKTKEIVSPNETQLRKILDSMK*nq
k*kvvenn*kkkkn*


Translated Amino Acid sequence (All Frames)
Frame A:
nk*hnilnsnf*kne*gy*cfykskir*ifkrcpsnykfws*mvwclqsfganf*qikhs
ipfgnifks*n**nkct*inkinnkysnnyvipkgkknkrncftkrnst*kns*fneiks
eikscreqlkkkkklk


Frame B:
INNIIYLIATFRKMSRVTNVSINPKLDEFLKGAQVIINFGAEWCGACKVLEPIFNKLSTQ
YPLVTFLKVEIDKINVHESTKSITSIPTIMLYQKGKKTKEIVSPNETQLRKILDSMK*nq
k*kvvenn*kkkkn*


Frame C:
*it*yt**qllek*vgllmfl*iqn*mnf*kvpk*l*ilelngvvlakfwsqfltn*aln
tlw*hf*klklik*mymnqqnq*qvfqqlcytkrekkqkklfhqtklnlekfliq*nkir
nkkl*rtikkkkktk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05501-1 (Contig-U05501-1Q)
/CSM_Contig/Contig-U05501-1Q.Seq.d
(408 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05501-1 (Contig-U05501-1Q) /CSM_Contig/Conti... 718 0.0
Contig-U11859-1 (Contig-U11859-1Q) /CSM_Contig/Conti... 38 0.007
Contig-U12998-1 (Contig-U12998-1Q) /CSM_Contig/Conti... 36 0.028
Contig-U05670-1 (Contig-U05670-1Q) /CSM_Contig/Conti... 36 0.028
Contig-U12457-1 (Contig-U12457-1Q) /CSM_Contig/Conti... 34 0.11
Contig-U11514-1 (Contig-U11514-1Q) /CSM_Contig/Conti... 34 0.11
Contig-U11348-1 (Contig-U11348-1Q) /CSM_Contig/Conti... 34 0.11
Contig-U10656-1 (Contig-U10656-1Q) /CSM_Contig/Conti... 34 0.11
Contig-U09578-1 (Contig-U09578-1Q) /CSM_Contig/Conti... 34 0.11
Contig-U12248-1 (Contig-U12248-1Q) /CSM_Contig/Conti... 28 6.9

>Contig-U05501-1 (Contig-U05501-1Q) /CSM_Contig/Contig-U05501-1Q.Seq.d
Length = 408

Score = 718 bits (362), Expect = 0.0
Identities = 378/386 (97%)
Strand = Plus / Plus


Query: 1 aataaataacataatatacttaatagcaacttttagaaaaatgagtagggttactaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataaataacataatatacttaatagcaacttttagaaaaatgagtagggttactaatgt 60


Query: 61 ttctataaatccaaaattagatgaatttttaaaaggtgcccaagtaattataaattttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctataaatccaaaattagatgaatttttaaaaggtgcccaagtaattataaattttgg 120


Query: 121 agctgaatggtgtggtgcttgcaaagttttggagccaatttttaacaaattaagcactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgaatggtgtggtgcttgcaaagttttggagccaatttttaacaaattaagcactca 180


Query: 181 ataccctttggtaacatttttaaaagttgaaattgataaaataaatgtacatgaatcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataccctttggtaacatttttaaaagttgaaattgataaaataaatgtacatgaatcaac 240


Query: 241 aaaatcaataacaagtattccaacaattatgttataccaaaagggnnnnnnnncaaaaga 300
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241 aaaatcaataacaagtattccaacaattatgttataccaaaagggaaaaaaaacaaaaga 300


Query: 301 aattgtttcaccaaacgaaactcaacttagaaaaattcttgattcaatgaaataaaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aattgtttcaccaaacgaaactcaacttagaaaaattcttgattcaatgaaataaaatca 360


Query: 361 gaaataaaaagttgtagagaacaatt 386
||||||||||||||||||||||||||
Sbjct: 361 gaaataaaaagttgtagagaacaatt 386


>Contig-U11859-1 (Contig-U11859-1Q) /CSM_Contig/Contig-U11859-1Q.Seq.d
Length = 828

Score = 38.2 bits (19), Expect = 0.007
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 1 aataaataacataatatac 19
|||||||||||||||||||
Sbjct: 790 aataaataacataatatac 772


>Contig-U12998-1 (Contig-U12998-1Q) /CSM_Contig/Contig-U12998-1Q.Seq.d
Length = 318

Score = 36.2 bits (18), Expect = 0.028
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 102 aagtaattataaattttg 119
||||||||||||||||||
Sbjct: 77 aagtaattataaattttg 94


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7256
Number of Sequences: 6905
Number of extensions: 7256
Number of successful extensions: 729
Number of sequences better than 10.0: 258
length of query: 408
length of database: 5,674,871
effective HSP length: 16
effective length of query: 392
effective length of database: 5,564,391
effective search space: 2181241272
effective search space used: 2181241272
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 7.28
Homology vs DNA
Query= Contig-U05501-1 (Contig-U05501-1Q) /CSM_Contig/Contig-U05501-1Q.Seq.d
(408 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C90776) Dictyostelium discoideum slug cDNA, clone SSJ134. 565 e-171 2
(AC104462) Homo sapiens chromosome 1 clone RP11-522M21, comp... 40 0.042 2
(AC068686) Homo sapiens chromosome 15 clone RP11-264F21 map ... 40 0.043 2
(EJ161292) 1092344048931 Global-Ocean-Sampling_GS-27-01-01-1... 34 0.053 2
(FJ497008) Latimeria menadoensis HoxD gene cluster, complete... 50 0.067 1
(AC216835) Populus trichocarpa clone ACSB1097-H13, complete ... 48 0.27 1
(AC213080) Populus trichocarpa clone ACSB1141-J20, complete ... 48 0.27 1
(EK415920) 1095515463780 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.27 1
(FK160977) XABT186811.g1 Gateway compatible cien cDNA librar... 48 0.27 1
(FK105877) XABT152704.g1 Gateway compatible cien cDNA librar... 48 0.27 1
(FF723446) XABT39722.rev Gateway compatible cien cDNA librar... 48 0.27 1
(FF689271) XABT102483.rev Gateway compatible cien cDNA libra... 48 0.27 1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 0.31 7
(BH353892) CH230-106I8.TV CHORI-230 Segment 1 Rattus norvegi... 34 0.32 3
(ER393736) 1095339007709 Global-Ocean-Sampling_GS-34-01-01-1... 44 0.36 2
(AC206804) Pan troglodytes clone CH251-207L13, WORKING DRAFT... 46 0.85 2
(AF311104) Homo sapiens chromosome 8 clone RP11-89A4 map 8p1... 46 0.87 2
(AC087533) Homo sapiens, clone RP11-89A4, complete sequence. 46 0.88 2
(AC197925) Zea mays chromosome 4 clone CH201-114M24; ZMMBBc0... 40 1.0 2
(GC696613) Sequence 11857 from patent US 6812339. 46 1.1 1
(AL357127) Human DNA sequence from clone RP11-282I1 on chrom... 46 1.1 1
(AL133372) Human chromosome 14 DNA sequence BAC R-269C4 of l... 46 1.1 1
(AC151062) Bos taurus clone CH240-503N8, WORKING DRAFT SEQUE... 46 1.1 1
(AC149724) Bos taurus clone CH240-219D7, WORKING DRAFT SEQUE... 46 1.1 1
(AC066588) Homo sapiens chromosome 3 clone RP11-277O23 map 3... 46 1.1 1
(AL359386) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 1.1 1
(AC207824) Macaca mulatta clone CH250-200E20, WORKING DRAFT ... 46 1.1 1
(AC207136) Macaca mulatta clone CH250-95I18, WORKING DRAFT S... 46 1.1 1
(AC203122) Colobus guereza clone CH272-193G9, WORKING DRAFT ... 46 1.1 1
(AC201720) Nomascus leucogenys leucogenys clone CH271-84N22,... 46 1.1 1
(AC201700) Chlorocebus aethiops clone CH252-372P9, WORKING D... 46 1.1 1
(AC011721) Homo sapiens chromosome 4 clone RP11-221C11 map 4... 46 1.1 1
(ER535423) 1093015832678 Global-Ocean-Sampling_GS-35-01-01-1... 46 1.1 1
(CC920275) t033c04ba.f1 TAMBT Bos taurus genomic clone t033c... 46 1.1 1
(AC011749) Homo sapiens BAC clone RP11-455E3 from Y, complet... 34 1.3 5
(CU464189) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 1.8 3
(AC168848) Strongylocentrotus purpuratus clone R3-13A10, WOR... 40 1.9 3
(AC172617) Bos taurus clone CH240-176O13, WORKING DRAFT SEQU... 42 2.0 4
(AY422724) Thermoanaerobacterium thermosaccharolyticum strai... 34 2.1 3
(AP004491) Lotus japonicus genomic DNA, chromosome 1, clone:... 38 2.1 3
(AC016919) Homo sapiens 3 BAC RP11-220J13 (Roswell Park Canc... 34 2.1 2
(FP312791) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 2.5 3
(CU466296) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 2.6 3
(AC230399) Bos taurus clone CH240-510B21, WORKING DRAFT SEQU... 42 2.6 5
(CU019587) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 2.8 3
(CE525073) tigr-gss-dog-17000365745351 Dog Library Canis lup... 34 2.9 2
(CT354698) Sus scrofa genomic clone CH242-380K19, genomic su... 32 4.0 3
(DN291056) PL030005B20F06 cDNA from sexually mature hermapho... 36 4.1 2
(CU207218) Zebrafish DNA sequence from clone CH211-77N17. 44 4.2 1
(BX537268) Zebrafish DNA sequence from clone DKEY-48A12 in l... 44 4.2 1
(BX511009) Zebrafish DNA sequence from clone DKEYP-86F6 in l... 44 4.2 1
(CT010495) Mouse DNA sequence from clone RP23-226G14 on chro... 44 4.2 1
(BC062097) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(BC036720) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(BC031404) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(BC029688) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(BC029058) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(BC024826) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(BC016898) Mus musculus cold shock domain containing E1, RNA... 44 4.2 1
(AK122393) Mus musculus mRNA for mKIAA0885 protein. 44 4.2 1
(AC168306) Mus musculus chromosome 18, clone RP23-225N9, com... 44 4.2 1
(AC163297) Mus musculus BAC clone RP23-106G24 from chromosom... 44 4.2 1
(AC154423) Mus musculus BAC clone RP24-221B7 from 17, comple... 44 4.2 1
(AC150894) Mus musculus BAC clone RP24-409D4 from chromosome... 44 4.2 1
(AC107776) Mus musculus chromosome 17, clone RP23-92G2, comp... 44 4.2 1
(AC102616) Mus musculus chromosome 18, clone RP23-425L21, co... 44 4.2 1
(AP008215) Oryza sativa (japonica cultivar-group) genomic DN... 44 4.2 1
(AP006756) Oryza sativa Japonica Group genomic DNA, chromoso... 44 4.2 1
(AM920436) Penicillium chrysogenum Wisconsin 54-1255 complet... 44 4.2 1
(AC137594) Oryza sativa (japonica cultivar-group) chromosome... 44 4.2 1
(EA690864) Sequence 69743 from patent US 7365185. 44 4.2 1
(EA625507) Sequence 4386 from patent US 7365185. 44 4.2 1
(CQ578216) Sequence 5974 from Patent WO0171042. 44 4.2 1
(CU302415) Wallaby DNA sequence from clone MEKBa-282L16. 44 4.2 1
(AE013599) Drosophila melanogaster chromosome 2R, complete s... 44 4.2 1
(AC012167) Drosophila melanogaster, chromosome 2R, region 60... 44 4.2 1
(AC004642) Drosophila melanogaster DNA sequence (P1s DS00543... 44 4.2 1
(AC130643) Rattus norvegicus clone CH230-498D19, WORKING DRA... 44 4.2 1
(AC129284) Rattus norvegicus clone CH230-6I22, *** SEQUENCIN... 44 4.2 1
(AC119001) Rattus norvegicus clone CH230-304G18, WORKING DRA... 44 4.2 1
(AC118821) Rattus norvegicus clone CH230-429D19, *** SEQUENC... 44 4.2 1
(AC109651) Rattus norvegicus clone CH230-97H5, WORKING DRAFT... 44 4.2 1
(AC107558) Rattus norvegicus clone CH230-99N19, *** SEQUENCI... 44 4.2 1
(AP004138) Oryza sativa Japonica Group genomic DNA, chromoso... 44 4.2 1
(AC203993) Zea mays chromosome 7 clone CH201-279G21; ZMMBBc0... 44 4.2 1
(AC020509) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 4.2 1
(BC055072) Mus musculus cDNA clone IMAGE:30033604, **** WARN... 44 4.2 1
(AK195712) Mus musculus cDNA, clone:Y1G0119G06, strand:plus,... 44 4.2 1
(AK187290) Mus musculus cDNA, clone:Y0G0141A17, strand:plus,... 44 4.2 1
(AK159863) Mus musculus osteoclast-like cell cDNA, RIKEN ful... 44 4.2 1
(AK159258) Mus musculus osteoclast-like cell cDNA, RIKEN ful... 44 4.2 1
(AK155751) Mus musculus B6-derived CD11 +ve dendritic cells ... 44 4.2 1
(AK153263) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK153196) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK152777) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK152531) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK151970) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK151723) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK151638) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK150882) Mus musculus bone marrow macrophage cDNA, RIKEN f... 44 4.2 1
(AK147012) Mus musculus 17 days pregnant adult female amnion... 44 4.2 1
(AK146706) Mus musculus 17 days embryo kidney cDNA, RIKEN fu... 44 4.2 1
(AK145932) Mus musculus 14 days embryo liver cDNA, RIKEN ful... 44 4.2 1
(AK145428) Mus musculus morula whole body morula cDNA, RIKEN... 44 4.2 1
(AK145351) Mus musculus morula whole body morula cDNA, RIKEN... 44 4.2 1
(AK144097) Mus musculus CRL-2116 JC cDNA, RIKEN full-length ... 44 4.2 1
(BH374007) AG-ND-135A12.TF ND-TAM Anopheles gambiae genomic ... 44 4.2 1
(BH267954) CH230-215I4.TJ CHORI-230 Segment 1 Rattus norvegi... 44 4.2 1
(EK405160) 1095500036281 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.2 1
(EK395223) 1095469518564 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.2 1
(EJ998161) 1093025003006 Global-Ocean-Sampling_GS-30-02-01-1... 44 4.2 1
(EJ602030) 1092961199950 Global-Ocean-Sampling_GS-29-01-01-1... 44 4.2 1
(EJ597490) 1092961104253 Global-Ocean-Sampling_GS-29-01-01-1... 44 4.2 1
(EJ262341) 1095349049675 Global-Ocean-Sampling_GS-27-01-01-1... 44 4.2 1
(EJ112101) 1092343158678 Global-Ocean-Sampling_GS-27-01-01-1... 44 4.2 1
(EJ042827) 1095454101230 Global-Ocean-Sampling_GS-26-01-01-1... 44 4.2 1
(CU014830) Equus caballus GSS, BAC clone CH241-88N18, SP6 en... 44 4.2 1
(CU008646) Equus caballus GSS, BAC clone CH241-79C3, SP6 end... 44 4.2 1
(AG832439) Oryza sativa Indica Group genomic DNA, BAC end se... 44 4.2 1
(AV571029) Mus musculus cDNA, Abe mouse ES cell cDNA library... 44 4.2 1
(EB443872) KR2B.101N01F.060128T7 KR2B Nicotiana tabacum cDNA... 44 4.2 1
(EB438895) KN6B.102A08F.051230T7 KN6B Nicotiana tabacum cDNA... 44 4.2 1
(DY249522) CSTFP1D0064A_319_499 CST-ProHSC Mus musculus cDNA... 44 4.2 1
(DY247394) CSTCB1D0101A_526_706 CST-QuHSC Mus musculus cDNA,... 44 4.2 1
(DV659223) DS176D_B03 Eppig Hampl Solter fully-grown mouse o... 44 4.2 1
(DV657767) DS157A_H10 Eppig Hampl Solter fully-grown mouse o... 44 4.2 1
(DT916182) S26-20542 Hematopoietic stem cells Mus musculus c... 44 4.2 1
(DT913925) S3R03.706 Hematopoietic stem cells Mus musculus c... 44 4.2 1
(CX732201) oc27f05.y1 No3 mouse (cataract/retinal degenerati... 44 4.2 1
(CX563786) UI-M-IB0-cue-n-09-0-UI.r1 NIH_BMAP_IB0 Mus muscul... 44 4.2 1
(CX206199) MNS10335 Mouse Neurosphere Normalized cDNA librar... 44 4.2 1
(CV861337) gonad_EST08813 Embryonic gonad cDNA Library Gallu... 44 4.2 1
(CN718290) E0762D04-5 NIA Mouse four-cell-Embryo cDNA librar... 44 4.2 1
(CN687296) E0239H11-5 NIA Mouse Embryonic Stem (ES) cell (Li... 44 4.2 1
(CN671211) A0903B07-5 NIA Mouse Embryonic Stem (ES) cell (Li... 44 4.2 1
(CK796037) AGENCOURT_19090925 NIH_MGC_189 Mus musculus cDNA ... 44 4.2 1
(CK622153) mi01c08.y1 Mouse RPE/choroid, unamplified: mi/mj ... 44 4.2 1
(CF982062) maj77b11.y1 McCarrey Eddy 18 day preleptotene spe... 44 4.2 1
(CF904137) A0418E10-5 NIA Mouse Osteoblast cDNA Library (Lon... 44 4.2 1
(CF903784) A0413G04-5 NIA Mouse Osteoblast cDNA Library (Lon... 44 4.2 1
(CF750763) UI-M-HJ0-cmo-f-07-0-UI.r1 NIH_BMAP_HJ0 Mus muscul... 44 4.2 1
(CF553927) AGENCOURT_15614125 Organ of Corti Mus musculus cD... 44 4.2 1
(CF104926) maj01g06.y1 McCarrey Eddy 6 day primitive type A ... 44 4.2 1
(CD805591) UI-M-GW0-cik-e-12-0-UI.r1 NIH_BMAP_GW0 Mus muscul... 44 4.2 1
(CD804751) UI-M-GW0-cig-e-12-0-UI.r1 NIH_BMAP_GW0 Mus muscul... 44 4.2 1
(CD773360) AGENCOURT_14713589 NIH_MGC_190 Mus musculus cDNA ... 44 4.2 1
(CD770307) AGENCOURT_14727190 NIH_MGC_190 Mus musculus cDNA ... 44 4.2 1
(CD563117) B0459A05-5 NIA Mouse E6.5 Whole Embryo cDNA Libra... 44 4.2 1
(CB596241) AGENCOURT_12785951 NIH_MGC_178 Mus musculus cDNA ... 44 4.2 1
(CB571136) AGENCOURT_12994032 NIH_MGC_165 Mus musculus cDNA ... 44 4.2 1
(CB272722) mai61h06.y1 McCarrey Eddy spermatocytes Mus muscu... 44 4.2 1
(CB235821) AGENCOURT_11482708 NIH_MGC_166 Mus musculus cDNA ... 44 4.2 1
(CB228066) AGENCOURT_11427545 NIH_MGC_164 Mus musculus cDNA ... 44 4.2 1
(CA951770) in78f10.y1 Kaestner ngn3 wt Mus musculus cDNA 5' ... 44 4.2 1
(CA532125) C0329B07-5N NIA Mouse Undifferentiated ES Cell cD... 44 4.2 1
(CA528147) 8063-38 Mouse E14.5 retina lambda ZAP II Library ... 44 4.2 1
(CA322604) UI-M-FX0-cch-o-06-0-UI.r1 NIH_BMAP_FX0 Mus muscul... 44 4.2 1
(BY105321) Mus musculus cDNA, RIKEN full-length enriched lib... 44 4.2 1
(BU923026) 7043-36 Mouse E14.5 retina lambda ZAP II Library ... 44 4.2 1
(BU058809) UI-M-FR0-cak-p-05-0-UI.r1 NIH_BMAP_FR0 Mus muscul... 44 4.2 1
(BQ940748) AGENCOURT_8806791 NIH_MGC_129 Mus musculus cDNA c... 44 4.2 1
(BQ126911) ii20f11.y1 Melton Amplified Mouse E16 5 Pancreas ... 44 4.2 1
(AI132041) vg82h11.r1 Barstead MPLRB1 Mus musculus cDNA clon... 44 4.2 1
(AI120095) uc27d02.r1 Soares_mammary_gland_NbMMG Mus musculu... 44 4.2 1
(AI020099) ub14d10.r1 Stratagene mouse macrophage (#937306) ... 44 4.2 1
(BI991346) 4093-91 Mouse E14.5 retina lambda ZAP II Library ... 44 4.2 1
(BI686350) 603313294F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 44 4.2 1
(BI665067) 603287544F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 44 4.2 1
(BI110758) 602895383F1 NCI_CGAP_Mam5 Mus musculus cDNA clone... 44 4.2 1
(BG802940) 0192-92 Mouse E14.5 retina lambda ZAP II Library ... 44 4.2 1
(BG246172) 602355162F1 NCI_CGAP_Mam1 Mus musculus cDNA clone... 44 4.2 1
(AA919598) vz22b11.r1 Stratagene mouse heart (#937316) Mus m... 44 4.2 1
(AA637347) vr31h07.r1 Barstead mouse myotubes MPLRB5 Mus mus... 44 4.2 1
(BE652603) UI-M-AO0-ach-h-10-0-UI.r1 NIH_BMAP_MPG Mus muscul... 44 4.2 1
(BE308098) 601096401F1 NCI_CGAP_Mam5 Mus musculus cDNA clone... 44 4.2 1
(AW912865) uf46a01.y1 Soares_mammary_gland_NMLMG Mus musculu... 44 4.2 1
(FG623604) TOBESTR027H07 TOBEST cDNA library 1 Nicotiana tab... 44 4.2 1
(AW475693) un70f06.y1 Sugano mouse kidney mkia Mus musculus ... 44 4.2 1
(AA164144) mq84c12.r1 Stratagene mouse melanoma (#937312) Mu... 44 4.2 1
(CP000510) Psychromonas ingrahamii 37, complete genome. 44 4.2 1
(AC175406) Bos taurus clone CH240-448G10, WORKING DRAFT SEQU... 36 4.5 3
(AP002372) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 38 4.6 3
(AC090196) Homo sapiens chromosome 8, clone RP11-766A10, com... 36 5.0 4
(AG748026) Macaca fuscata fuscata DNA, clone: MSB2-211O14_R,... 38 5.0 2
(FP085496) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 5.1 6
(AP003383) Homo sapiens genomic DNA, chromosome 11q clone:RP... 38 5.3 3
(AC015500) Homo sapiens clone RP11-21G19, WORKING DRAFT SEQU... 38 5.4 3
(AC162727) Loxodonta africana clone VMRC15-151N14, WORKING D... 40 5.4 3
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 36 5.4 9
(CU302409) Wallaby DNA sequence from clone MEKBa-280H20. 40 5.4 3
(CR388004) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 5.5 3
(EK250802) 1095460279398 Global-Ocean-Sampling_GS-31-01-01-1... 36 5.7 2
(AM484629) Vitis vinifera, whole genome shotgun sequence, co... 36 6.3 2
(CU914694) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 6.8 3
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 34 7.0 5
(CR356244) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 7.2 3
(EU025719) Salmo salar lunapark (Lnp) and even-skipped homeo... 32 7.5 2
(AL672081) Mouse DNA sequence from clone RP23-319D17 on chro... 32 7.6 2
(AL161616) Human DNA sequence from clone RP11-326L9 on chrom... 32 8.0 2
(CU467585) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 8.5 3
(AC126848) Rattus norvegicus clone CH230-12D24, WORKING DRAF... 34 9.0 6
(AL663018) Oryza sativa genomic DNA, chromosome 4, BAC clone... 36 9.1 4
(AC235886) Glycine max strain Williams 82 clone GM_WBc0028K1... 30 9.4 6
(GC700442) Sequence 15687 from patent US 6812339. 38 9.5 3
(AC226709) Oryza minuta clone OM__Ba0187D06, *** SEQUENCING ... 36 9.7 2

>(C90776) Dictyostelium discoideum slug cDNA, clone SSJ134.
Length = 409

Score = 565 bits (285), Expect(2) = e-171
Identities = 285/285 (100%)
Strand = Plus / Plus


Query: 1 aataaataacataatatacttaatagcaacttttagaaaaatgagtagggttactaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aataaataacataatatacttaatagcaacttttagaaaaatgagtagggttactaatgt 60


Query: 61 ttctataaatccaaaattagatgaatttttaaaaggtgcccaagtaattataaattttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttctataaatccaaaattagatgaatttttaaaaggtgcccaagtaattataaattttgg 120


Query: 121 agctgaatggtgtggtgcttgcaaagttttggagccaatttttaacaaattaagcactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgaatggtgtggtgcttgcaaagttttggagccaatttttaacaaattaagcactca 180


Query: 181 ataccctttggtaacatttttaaaagttgaaattgataaaataaatgtacatgaatcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataccctttggtaacatttttaaaagttgaaattgataaaataaatgtacatgaatcaac 240


Query: 241 aaaatcaataacaagtattccaacaattatgttataccaaaaggg 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaatcaataacaagtattccaacaattatgttataccaaaaggg 285

Score = 69.9 bits (35), Expect(2) = e-171
Identities = 35/35 (100%)
Strand = Plus / Plus


Query: 294 caaaagaaattgtttcaccaaacgaaactcaactt 328
|||||||||||||||||||||||||||||||||||
Sbjct: 294 caaaagaaattgtttcaccaaacgaaactcaactt 328

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 529,903,532
Number of extensions: 34666128
Number of successful extensions: 2923938
Number of sequences better than 10.0: 205
Length of query: 408
Length of database: 104,622,809,269
Length adjustment: 23
Effective length of query: 385
Effective length of database: 102,190,702,835
Effective search space: 39343420591475
Effective search space used: 39343420591475
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 8. 1
Homology vs Protein
Query= Contig-U05501-1 (Contig-U05501-1Q) /CSM_Contig/Contig-U05501-1Q.Seq.d
(408 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(P29447) RecName: Full=Thioredoxin-3; Short=Trx-3; 100 1e-20
C46264(C46264) thioredoxin 3 - slime mold (Dictyostelium discoid... 100 2e-20
(P29446) RecName: Full=Thioredoxin-2; Short=Trx-2; Flag... 88 1e-16
AM910994_488(AM910994|pid:none) Plasmodium knowlesi strain H chr... 70 2e-11
AB478083_1(AB478083|pid:none) Pichia pastoris TRX2 gene for thio... 70 2e-11
CR382131_1301(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 70 2e-11
FM992695_901(FM992695|pid:none) Candida dubliniensis CD36 chromo... 69 5e-11
AF202664_1(AF202664|pid:none) Plasmodium falciparum thioredoxin ... 69 5e-11
AY838902_1(AY838902|pid:none) Antrodia camphorata thioredoxin mR... 69 7e-11
AF435815_1(AF435815|pid:none) Hordeum vulgare thioredoxin h-like... 68 9e-11
AY204511_1(AY204511|pid:none) Leymus chinensis thioredoxin h gen... 68 9e-11
AP003628_18(AP003628|pid:none) Oryza sativa Japonica Group genom... 68 9e-11
L35043_32(L35043|pid:none) Mycoplasma gallisepticum strain A5969... 68 9e-11
AE015450_633(AE015450|pid:none) Mycoplasma gallisepticum strain ... 67 2e-10
AK241734_1(AK241734|pid:none) Oryza sativa Japonica Group cDNA, ... 67 2e-10
CP000590_133(CP000590|pid:none) Ostreococcus lucimarinus CCE9901... 67 2e-10
EF086787_1(EF086787|pid:none) Picea sitchensis clone WS02750_E16... 67 2e-10
AF159386_1(AF159386|pid:none) Secale cereale thioredoxin-like pr... 67 3e-10
L35043_18(L35043|pid:none) Mycoplasma gallisepticum strain A5969... 67 3e-10
S49352(S49352)protein S1 - Phalaris coerulescens 67 3e-10
S49353(S49353;S49350)protein S2 - Phalaris coerulescens 67 3e-10
AF159388_1(AF159388|pid:none) Phalaris coerulescens thioredoxin-... 67 3e-10
(Q9Z7P5) RecName: Full=Thioredoxin; Short=Trx; &AE0013... 67 3e-10
AF438359_1(AF438359|pid:none) Triticum aestivum thioredoxin mRNA... 67 3e-10
AF159385_1(AF159385|pid:none) Hordeum bulbosum thioredoxin-like ... 66 3e-10
AM235208_1(AM235208|pid:none) Pisum sativum mitochondrial mRNA f... 66 3e-10
BT051300_1(BT051300|pid:none) Medicago truncatula clone MTYF1_F2... 66 3e-10
EU956315_1(EU956315|pid:none) Zea mays clone 1560680 thioredoxin... 66 3e-10
FM872308_551(FM872308|pid:none) Chlamydia trachomatis JALI20 ser... 66 4e-10
BT009704_1(BT009704|pid:none) Arabidopsis thaliana At3g17880 gen... 66 4e-10
AF435816_1(AF435816|pid:none) Zea mays thioredoxin h-like protei... 66 4e-10
BC166957_1(BC166957|pid:none) Xenopus tropicalis hypothetical pr... 66 4e-10
(O84544) RecName: Full=Thioredoxin; Short=Trx; &AE0012... 66 4e-10
BC126781_1(BC126781|pid:none) Bos taurus thioredoxin domain cont... 66 4e-10
AB019230_10(AB019230|pid:none) Arabidopsis thaliana genomic DNA,... 66 4e-10
(P82460) RecName: Full=Thioredoxin; Short=Trx; &AF3828... 65 6e-10
EF147512_1(EF147512|pid:none) Populus trichocarpa clone WS0123_A... 65 6e-10
AY891764_1(AY891764|pid:none) Synthetic construct Homo sapiens c... 65 8e-10
FJ384985_1(FJ384985|pid:none) Bombina orientalis thioredoxin mRN... 65 8e-10
DQ215312_1(DQ215312|pid:none) Taeniopygia guttata clone 0058P004... 65 8e-10
AF159387_1(AF159387|pid:none) Lolium perenne thioredoxin-like pr... 65 8e-10
(P50413) RecName: Full=Thioredoxin; Short=Trx; &Z25864... 65 8e-10
BC129794_1(BC129794|pid:none) Xenopus laevis hypothetical protei... 65 1e-09
EF087703_1(EF087703|pid:none) Picea sitchensis clone WS02736_F02... 65 1e-09
CU928166_43(CU928166|pid:none) Kluyveromyces thermotolerans stra... 65 1e-09
NRL(3TRX) thioredoxin (reduced) - human &NRL(4TRX) 64 1e-09
AJ844023_1(AJ844023|pid:none) Plantago major mRNA for thioredoxi... 64 1e-09
(P80028) RecName: Full=Thioredoxin H-type; Short=Trx-H;... 64 1e-09
(Q9C9Y6) RecName: Full=Thioredoxin H-type 9; Short=Trx-... 64 1e-09
AY673828_1(AY673828|pid:none) Schistosoma mansoni thioredoxin 2 ... 64 1e-09
AC004238_23(AC004238|pid:none) Arabidopsis thaliana chromosome 2... 64 1e-09
AF186240_1(AF186240|pid:none) Secale cereale thioredoxin-like pr... 64 1e-09
AY242060_1(AY242060|pid:none) Melopsittacus undulatus thioredoxi... 64 2e-09
AY084415_1(AY084415|pid:none) Arabidopsis thaliana clone 107806 ... 64 2e-09
AY036906_1(AY036906|pid:none) Vitis labrusca Hsp70 interacting p... 64 2e-09
(O97508) RecName: Full=Thioredoxin; Short=Trx; &AB0224... 64 2e-09
AC024827_2(AC024827|pid:none) Caenorhabditis elegans cosmid Y55F... 64 2e-09
AC024810_17(AC024810|pid:none) Caenorhabditis elegans cosmid Y54... 64 2e-09
BC072884_1(BC072884|pid:none) Xenopus laevis MGC80314 protein, m... 64 2e-09
EU144128_1(EU144128|pid:none) Glycine max thioredoxin h2 mRNA, c... 64 2e-09
EU959293_1(EU959293|pid:none) Zea mays clone 214479 thioredoxin ... 64 2e-09
CP000596_169(CP000596|pid:none) Ostreococcus lucimarinus CCE9901... 64 2e-09
EU954106_1(EU954106|pid:none) Zea mays clone 1455829 thioredoxin... 64 2e-09
AY184798_1(AY184798|pid:none) Chlamydomonas reinhardtii thioredo... 64 2e-09
CP000509_4633(CP000509|pid:none) Nocardioides sp. JS614, complet... 63 3e-09
AY575954_1(AY575954|pid:none) Glycine max thioredoxin mRNA, comp... 63 3e-09
AM460488_1(AM460488|pid:none) Vitis vinifera contig VV78X042595.... 63 3e-09
AC151524_17(AC151524|pid:none) Medicago truncatula chromosome 7 ... 63 3e-09
AK340367_1(AK340367|pid:none) Acyrthosiphon pisum ACYPI008005 mR... 63 4e-09
CR380957_28(CR380957|pid:none) Candida glabrata strain CBS138 ch... 63 4e-09
AK007790_1(AK007790|pid:none) Mus musculus 10 day old male pancr... 63 4e-09
AM920433_354(AM920433|pid:none) Penicillium chrysogenum Wisconsi... 63 4e-09
(Q9PJK3) RecName: Full=Thioredoxin; Short=Trx; &AE0021... 63 4e-09
(P11232) RecName: Full=Thioredoxin; Short=Trx; &AF3110... 63 4e-09
AM989985_13(AM989985|pid:none) Zygosaccharomyces rouxii strain C... 63 4e-09
AY184797_1(AY184797|pid:none) Chlamydomonas reinhardtii cytosoli... 63 4e-09
S77780(S77780;S46921) thioredoxin - Mycoplasma capricolum (fragm... 62 5e-09
EF144427_1(EF144427|pid:none) Populus trichocarpa clone PX0019_G... 62 5e-09
(P08629) RecName: Full=Thioredoxin; Short=Trx; &A30006... 62 5e-09
AY815296_1(AY815296|pid:none) Schistosoma japonicum SJCHGC03599 ... 62 5e-09
CP000563_3862(CP000563|pid:none) Shewanella baltica OS155, compl... 62 5e-09
(Q43636) RecName: Full=Thioredoxin H-type; Short=Trx-H;... 62 6e-09
BX293980_71(BX293980|pid:none) Mycoplasma mycoides subsp. mycoid... 62 6e-09
AF435818_1(AF435818|pid:none) Nicotiana tabacum thioredoxin h-li... 62 6e-09
CR954217_167(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 62 8e-09
EF083929_1(EF083929|pid:none) Picea sitchensis clone WS0272_C12 ... 62 8e-09
AY525378_1(AY525378|pid:none) Paxillus involutus thioredoxin mRN... 62 8e-09
CR382135_217(CR382135|pid:none) Debaryomyces hansenii strain CBS... 62 8e-09
AF483265_1(AF483265|pid:none) Populus tremula x Populus tremuloi... 62 8e-09
AF473536_1(AF473536|pid:none) Schistosoma mansoni thioredoxin mR... 61 1e-08
U42760_1(U42760|pid:none) Naegleria fowleri thioredoxin homolog ... 61 1e-08
CP000503_504(CP000503|pid:none) Shewanella sp. W3-18-1, complete... 61 1e-08
(Q07090) RecName: Full=Thioredoxin H-type 2; Short=Trx-... 61 1e-08
EF085642_1(EF085642|pid:none) Picea sitchensis clone WS02919_K03... 61 1e-08
(P08628) RecName: Full=Thioredoxin; Short=Trx; 61 1e-08
AM270051_9(AM270051|pid:none) Aspergillus niger contig An03c0100... 61 1e-08
CP000821_4101(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 61 1e-08
AM931300_12(AM931300|pid:none) Enterococcus faecium pVEF3 plasmid. 61 1e-08
EU239366_1(EU239366|pid:none) Brassica juncea thioredoxin mRNA, ... 61 1e-08
DQ490238_1(DQ490238|pid:none) Tetrahymena thermophila dynein lig... 61 1e-08
AE014296_1058(AE014296|pid:none) Drosophila melanogaster chromos... 61 1e-08
AE017263_179(AE017263|pid:none) Mesoplasma florum L1 complete ge... 61 1e-08
DQ227992_1(DQ227992|pid:none) Eucalyptus grandis thioredoxin h m... 61 1e-08
AF143404_1(AF143404|pid:none) Drosophila melanogaster thioredoxi... 61 1e-08
AY170651_1(AY170651|pid:none) Pisum sativum clone 4 thioredoxin ... 61 1e-08
AC144502_16(AC144502|pid:none) Medicago truncatula clone mth2-5p... 61 1e-08
DQ121443_1(DQ121443|pid:none) Medicago truncatula thioredoxin h2... 61 1e-08
(Q98TX1) RecName: Full=Thioredoxin; Short=Trx; &AF3217... 60 2e-08
(Q5R9M3) RecName: Full=Thioredoxin; Short=Trx; &CR8593... 60 2e-08
AL844508_254(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 60 2e-08
EU959440_1(EU959440|pid:none) Zea mays clone 218170 thioredoxin ... 60 2e-08
CP000931_3857(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 60 2e-08
AY245454_1(AY245454|pid:none) Hordeum vulgare subsp. vulgare thi... 60 2e-08
BC084527_1(BC084527|pid:none) Xenopus tropicalis hypothetical LO... 60 2e-08
AF286593_1(AF286593|pid:none) Triticum aestivum cultivar Soisson... 60 2e-08
AY271308_1(AY271308|pid:none) Citrus x paradisi thioredoxin H mR... 60 2e-08
(Q5WNE3) RecName: Full=Peptide-N(4)-(N-acetyl-beta-glucosaminyl)... 60 2e-08
A48516_1(A48516|pid:none) Sequence 4 from Patent WO9603505. &AF... 60 2e-08
AY088552_1(AY088552|pid:none) Arabidopsis thaliana clone 7791 mR... 60 2e-08
U35826_1(U35826|pid:none) Arabidopsis thaliana thioredoxin h (TR... 60 2e-08
EU951839_1(EU951839|pid:none) Zea mays clone 1061422 unknown mRNA. 60 2e-08
AJ937744_1(AJ937744|pid:none) Aspergillus fumigatus mRNA for thi... 60 2e-08
(Q38879) RecName: Full=Thioredoxin H-type 2; Short=Trx-... 60 2e-08
AJ319808_1(AJ319808|pid:none) Pisum sativum mRNA for thioredoxin... 60 2e-08
BT062603_1(BT062603|pid:none) Zea mays full-length cDNA clone ZM... 60 3e-08
AF508130_1(AF508130|pid:none) Plasmodium falciparum 3D7 thioredo... 60 3e-08
EF070462_1(EF070462|pid:none) Maconellicoccus hirsutus clone WHM... 60 3e-08
CP000447_459(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 60 3e-08
FJ041113_1(FJ041113|pid:none) Hevea brasiliensis isolate HaiKen ... 60 3e-08
(O94504) RecName: Full=Thioredoxin-2, mitochondrial; Sh... 60 3e-08
AX461034_1(AX461034|pid:none) Sequence 24 from Patent WO0222823. 60 3e-08
EF172446_1(EF172446|pid:none) Brassica juncea thioredoxin mRNA, ... 59 4e-08
(Q6XHI1) RecName: Full=Thioredoxin-2; Short=Trx-2; &AY... 59 4e-08
AJ937745_1(AJ937745|pid:none) Aspergillus fumigatus mRNA for thi... 59 4e-08
AY072771_1(AY072771|pid:none) Triticum aestivum cultivar Soisson... 59 4e-08
EZ000056_1(EZ000056|pid:none) TSA: Schistosoma japonicum SJCHGC0... 59 5e-08
AY245455_1(AY245455|pid:none) Hordeum vulgare subsp. vulgare thi... 59 5e-08
CP000323_2285(CP000323|pid:none) Psychrobacter cryohalolentis K5... 59 5e-08
EU280164_1(EU280164|pid:none) Vitis vinifera thioredoxin h (Trx)... 59 5e-08
AP009247_874(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 59 5e-08
(Q96419) RecName: Full=Thioredoxin H-type; Short=Trx-H;... 59 5e-08
CP000302_443(CP000302|pid:none) Shewanella denitrificans OS217, ... 59 5e-08
AJ235270_2(AJ235270|pid:none) Rickettsia prowazekii strain Madri... 59 5e-08
AM285319_31(AM285319|pid:none) Spiroplasma citri GII3-3X chromos... 59 5e-08
CR382125_708(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 59 5e-08
EU016632_9(EU016632|pid:none) Uncultured Group I marine crenarch... 59 7e-08
BC084818_1(BC084818|pid:none) Xenopus laevis hypothetical LOC495... 59 7e-08
CP001056_2460(CP001056|pid:none) Clostridium botulinum B str. Ek... 58 9e-08
AB061204_1(AB061204|pid:none) Cucurbita maxima mRNA for thioredo... 58 9e-08
AK063980_1(AK063980|pid:none) Oryza sativa Japonica Group cDNA c... 58 9e-08
CP000439_833(CP000439|pid:none) Francisella tularensis subsp. no... 58 9e-08
EU957319_1(EU957319|pid:none) Zea mays clone 1588464 thioredoxin... 58 9e-08
BA000016_2355(BA000016|pid:none) Clostridium perfringens str. 13... 58 9e-08
EU706448_1(EU706448|pid:none) Triticum aestivum cultivar Soisson... 58 9e-08
DQ905963_1(DQ905963|pid:none) Lactobacillus sanfranciscensis put... 58 9e-08
(P47370) RecName: Full=Thioredoxin; Short=Trx; &CP0009... 58 9e-08
AK340283_1(AK340283|pid:none) Acyrthosiphon pisum ACYPI009665 mR... 58 9e-08
AY816131_1(AY816131|pid:none) Schistosoma japonicum SJCHGC06363 ... 58 1e-07
CP001339_350(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 58 1e-07
FN315650_1(FN315650|pid:none) Schistosoma japonicum isolate Anhu... 58 1e-07
AC008007_20(AC008007|pid:none) Genomic sequence for Arabidopsis ... 58 1e-07
CP001213_565(CP001213|pid:none) Bifidobacterium animalis subsp. ... 58 1e-07
AL929358_8(AL929358|pid:none) Plasmodium falciparum strain 3D7, ... 58 1e-07
AP007151_915(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 58 1e-07
BT077794_1(BT077794|pid:none) Lepeophtheirus salmonis Pacific fo... 58 1e-07
CP001279_1095(CP001279|pid:none) Nautilia profundicola AmH, comp... 57 2e-07
BC049031_1(BC049031|pid:none) Danio rerio zgc:56493, mRNA (cDNA ... 57 2e-07
CP001511_800(CP001511|pid:none) Methylobacterium extorquens AM1 ... 57 2e-07
GQ121962_1(GQ121962|pid:none) Sonneratia alba clone Sa465_sanya ... 57 2e-07
BC049564_1(BC049564|pid:none) Mus musculus thioredoxin domain co... 57 2e-07
AP007281_525(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 57 2e-07
CP000750_844(CP000750|pid:none) Kineococcus radiotolerans SRS302... 57 2e-07
AK015240_1(AK015240|pid:none) Mus musculus adult male testis cDN... 57 2e-07
AM942444_1974(AM942444|pid:none) Corynebacterium urealyticum DSM... 57 2e-07
(Q8TFM8) RecName: Full=Thioredoxin-like protein; AltName: Allerg... 57 2e-07
(Q69AB2) RecName: Full=Thioredoxin domain-containing protein 8; ... 57 2e-07
AJ605826_1(AJ605826|pid:none) Mesobuthus gibbosus partial trxt g... 57 2e-07
CP000507_3206(CP000507|pid:none) Shewanella amazonensis SB2B, co... 57 2e-07
(Q9DGI3) RecName: Full=Thioredoxin; Short=Trx; &AF2936... 57 2e-07
BT081170_1(BT081170|pid:none) Caligus clemensi clone ccle-evs-51... 57 2e-07
CP000462_89(CP000462|pid:none) Aeromonas hydrophila subsp. hydro... 57 2e-07
AM942759_3283(AM942759|pid:none) Proteus mirabilis strain HI4320... 57 2e-07
AM269955_58(AM269955|pid:none) Aspergillus niger contig An01c008... 57 2e-07
CP000077_1699(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 57 2e-07
BT036432_1(BT036432|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-07
AC104321_8(AC104321|pid:none) Oryza sativa chromosome 3 BAC OSJN... 57 2e-07
CT573072_936(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 57 2e-07
CP000644_4001(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 57 2e-07
CP001620_1971(CP001620|pid:none) Corynebacterium kroppenstedtii ... 57 3e-07
EF145486_1(EF145486|pid:none) Populus trichocarpa clone WS01125_... 57 3e-07
EU958748_1(EU958748|pid:none) Zea mays clone 207751 thioredoxin ... 57 3e-07
AJ605859_1(AJ605859|pid:none) Mesobuthus gibbosus partial trxt g... 57 3e-07
(Q9V429) RecName: Full=Thioredoxin-2; Short=DmTrx-2; &... 57 3e-07
AE014134_1740(AE014134|pid:none) Drosophila melanogaster chromos... 57 3e-07
AP007154_97(AP007154|pid:none) Aspergillus oryzae RIB40 genomic ... 57 3e-07
GM961231_1(GM961231|pid:none) Sequence 8185 from Patent WO200814... 57 3e-07
AJ605817_1(AJ605817|pid:none) Mesobuthus gibbosus partial trxt g... 57 3e-07
AC130601_4(AC130601|pid:none) Oryza sativa (japonica cultivar-gr... 57 3e-07
AJ605847_1(AJ605847|pid:none) Mesobuthus gibbosus partial trxt g... 57 3e-07
AJ605827_1(AJ605827|pid:none) Mesobuthus gibbosus partial trxt g... 57 3e-07
CP000082_1989(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 57 3e-07
CP000510_3007(CP000510|pid:none) Psychromonas ingrahamii 37, com... 57 3e-07
CR931997_2056(CR931997|pid:none) Corynebacterium jeikeium K411 c... 57 3e-07
CP000233_1456(CP000233|pid:none) Lactobacillus salivarius UCC118... 56 4e-07
EU959205_1(EU959205|pid:none) Zea mays clone 212031 thioredoxin ... 56 4e-07
FN318998_1(FN318998|pid:none) Schistosoma japonicum isolate Anhu... 56 4e-07
CP000555_1283(CP000555|pid:none) Methylibium petroleiphilum PM1,... 56 4e-07
AM180088_1576(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 56 4e-07
CU458896_4906(CU458896|pid:none) Mycobacterium abscessus chromos... 56 4e-07
(O17486) RecName: Full=Thioredoxin; Short=Trx; &AF0346... 56 4e-07
CR378674_138(CR378674|pid:none) Photobacterium profundum SS9; se... 56 4e-07
(Q9TW67) RecName: Full=Peptide-N(4)-(N-acetyl-beta-glucosaminyl)... 56 4e-07
CP001600_86(CP001600|pid:none) Edwardsiella ictaluri 93-146, com... 56 4e-07
DQ443142_1(DQ443142|pid:none) Bombyx mori thioredoxin mRNA, comp... 56 4e-07
AM412317_3440(AM412317|pid:none) Clostridium botulinum A str. AT... 56 5e-07
(Q7M1B9) RecName: Full=Thioredoxin; Short=Trx; &CP0009... 56 5e-07
AY344229_1(AY344229|pid:none) Ipomoea batatas thioredoxin H1 mRN... 56 5e-07
AY596298_230(AY596298|pid:none) Haloarcula marismortui ATCC 4304... 56 5e-07
CP000960_98(CP000960|pid:none) Burkholderia cenocepacia MC0-3 ch... 56 5e-07
CR382132_59(CR382132|pid:none) Yarrowia lipolytica strain CLIB12... 56 5e-07
EU972241_1(EU972241|pid:none) Zea mays clone 378310 thioredoxin ... 56 5e-07
CP001083_3575(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 56 5e-07
AY376435_1(AY376435|pid:none) Paracoccidioides brasiliensis thio... 56 5e-07
AJ605819_1(AJ605819|pid:none) Mesobuthus gibbosus partial trxt g... 56 5e-07
CP001037_5730(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 56 5e-07
AE016853_5117(AE016853|pid:none) Pseudomonas syringae pv. tomato... 56 5e-07
AE016820_142(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 55 6e-07
DQ986206_1(DQ986206|pid:none) Borrelia garinii strain FAR01 thio... 55 6e-07
DQ986213_1(DQ986213|pid:none) Borrelia garinii strain 387 thiore... 55 6e-07
DQ986205_1(DQ986205|pid:none) Borrelia garinii strain 935T thior... 55 6e-07
AY652616_1(AY652616|pid:none) Chlamys farreri thioredoxin mRNA, ... 55 6e-07
CP001280_1391(CP001280|pid:none) Methylocella silvestris BL2, co... 55 6e-07
(Q9ZEE0) RecName: Full=Thioredoxin; Short=Trx; 55 6e-07
AJ605810_1(AJ605810|pid:none) Mesobuthus cyprius partial trxt ge... 55 6e-07
AP007165_8(AP007165|pid:none) Aspergillus oryzae RIB40 genomic D... 55 6e-07
(O51088) RecName: Full=Thioredoxin; Short=Trx; &AE0007... 55 6e-07
CP000453_364(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1... 55 6e-07
CP001601_2523(CP001601|pid:none) Corynebacterium aurimucosum ATC... 55 6e-07
DQ986209_1(DQ986209|pid:none) Borrelia garinii strain G25 thiore... 55 6e-07
DQ986217_1(DQ986217|pid:none) Borrelia garinii strain NT29 thior... 55 6e-07
BC050132_1(BC050132|pid:none) Homo sapiens thioredoxin domain co... 55 8e-07
CP000454_3046(CP000454|pid:none) Arthrobacter sp. FB24, complete... 55 8e-07
CP000048_57(CP000048|pid:none) Borrelia hermsii DAH, complete ge... 55 8e-07
CP000352_2127(CP000352|pid:none) Ralstonia metallidurans CH34, c... 55 8e-07
AC010675_9(AC010675|pid:none) Arabidopsis thaliana chromosome 1 ... 55 8e-07
AF080095_1(AF080095|pid:none) Homo sapiens sperm-specific thiore... 55 8e-07
CP000448_438(CP000448|pid:none) Syntrophomonas wolfei subsp. wol... 55 8e-07
DQ986202_1(DQ986202|pid:none) Borrelia valaisiana VS116 thioredo... 55 8e-07
(Q92JR5) RecName: Full=Thioredoxin; Short=Trx; &AE0069... 55 8e-07
CU695238_15(CU695238|pid:none) Ralstonia solanacearum strain Mol... 55 8e-07
BX897700_24(BX897700|pid:none) Bartonella quintana str. Toulouse... 55 8e-07
(Q86VQ3) RecName: Full=Thioredoxin domain-containing protein 2; ... 55 8e-07
CP000409_2(CP000409|pid:none) Rickettsia canadensis str. McKiel,... 55 8e-07
AL646052_1189(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 55 1e-06
CP001341_3878(CP001341|pid:none) Arthrobacter chlorophenolicus A... 55 1e-06
AM167904_2376(AM167904|pid:none) Bordetella avium 197N complete ... 55 1e-06
EU499301_1(EU499301|pid:none) Litopenaeus vannamei thioredoxin 1... 55 1e-06
CP001205_58(CP001205|pid:none) Borrelia burgdorferi ZS7, complet... 55 1e-06
(Q4UNK3) RecName: Full=Thioredoxin; Short=Trx; 55 1e-06
BA000016_739(BA000016|pid:none) Clostridium perfringens str. 13 ... 55 1e-06
AE001437_3036(AE001437|pid:none) Clostridium acetobutylicum ATCC... 55 1e-06
CP000511_5969(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 55 1e-06
EF082902_1(EF082902|pid:none) Picea sitchensis clone WS02728_H05... 55 1e-06
CP000680_307(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 55 1e-06
CP000089_2968(CP000089|pid:none) Dechloromonas aromatica RCB, co... 55 1e-06
CR767821_778(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 55 1e-06
CP000053_2(CP000053|pid:none) Rickettsia felis URRWXCal2, comple... 55 1e-06
CR954201_67(CR954201|pid:none) Ostreococcus tauri strain OTTH059... 55 1e-06
CP000896_783(CP000896|pid:none) Acholeplasma laidlawii PG-8A, co... 55 1e-06
AM420293_7186(AM420293|pid:none) Saccharopolyspora erythraea NRR... 55 1e-06
CP000141_539(CP000141|pid:none) Carboxydothermus hydrogenoforman... 55 1e-06
AL606687_5(AL606687|pid:none) Oryza sativa genomic DNA, chromoso... 54 1e-06
CP000915_779(CP000915|pid:none) Francisella tularensis subsp. me... 54 1e-06
CP000325_1221(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 54 1e-06
AP008210_1557(AP008210|pid:none) Oryza sativa (japonica cultivar... 54 1e-06
CP001393_1553(CP001393|pid:none) Anaerocellum thermophilum DSM 6... 54 1e-06
DQ986207_1(DQ986207|pid:none) Borrelia garinii strain HP3 thiore... 54 1e-06
(P29429) RecName: Full=Thioredoxin; Short=Trx; 54 1e-06
BA000026_172(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 54 1e-06
CP000395_59(CP000395|pid:none) Borrelia afzelii PKo, complete ge... 54 1e-06
AE000782_1267(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 54 1e-06
AE009951_686(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 54 1e-06
CP000356_2644(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 54 1e-06
S27053(S27053)thioredoxin - Emericella nidulans 54 1e-06
GQ227681_1(GQ227681|pid:none) Beauveria bassiana thioredoxin gen... 54 1e-06
CP001357_2587(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 54 1e-06
AM260525_26(AM260525|pid:none) Bartonella tribocorum CIP 105476 ... 54 2e-06
FN357896_1(FN357896|pid:none) Schistosoma mansoni genome sequenc... 54 2e-06
DQ986218_1(DQ986218|pid:none) Borrelia afzelii strain A26S thior... 54 2e-06
AB169251_1(AB169251|pid:none) Macaca fascicularis testis cDNA, c... 54 2e-06
AE017245_649(AE017245|pid:none) Mycoplasma synoviae 53, complete... 54 2e-06
CP000679_1649(CP000679|pid:none) Caldicellulosiruptor saccharoly... 54 2e-06
DQ986220_1(DQ986220|pid:none) Borrelia afzelii ACA-1 strain ACA1... 54 2e-06
BT052063_1(BT052063|pid:none) Medicago truncatula clone MTYF9_FA... 54 2e-06
AP008937_1690(AP008937|pid:none) Lactobacillus fermentum IFO 395... 54 2e-06
AJ310990_1(AJ310990|pid:none) Pisum sativum mRNA for thioredoxin... 54 2e-06
CP001102_608(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 54 2e-06
AP009384_715(AP009384|pid:none) Azorhizobium caulinodans ORS 571... 54 2e-06
FN357896_2(FN357896|pid:none) Schistosoma mansoni genome sequenc... 54 2e-06
(Q9USR1) RecName: Full=Thioredoxin-like protein 1; AltName: Full... 54 2e-06
BA000037_3182(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 54 2e-06
AY084496_1(AY084496|pid:none) Arabidopsis thaliana clone 10950 m... 54 2e-06
CP001173_1350(CP001173|pid:none) Helicobacter pylori G27, comple... 54 2e-06
AE016795_890(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 54 2e-06
AF483266_1(AF483266|pid:none) Populus tremula x Populus tremuloi... 54 2e-06
CU466930_780(CU466930|pid:none) Candidatus Cloacamonas acidamino... 54 2e-06
BX571874_205(BX571874|pid:none) Photorhabdus luminescens subsp. ... 54 2e-06
BX640416_67(BX640416|pid:none) Bordetella pertussis strain Toham... 54 2e-06
CP001341_2732(CP001341|pid:none) Arthrobacter chlorophenolicus A... 54 2e-06
CP000140_437(CP000140|pid:none) Parabacteroides distasonis ATCC ... 54 2e-06
DQ490239_1(DQ490239|pid:none) Tetrahymena thermophila dynein lig... 54 2e-06
CP001340_3651(CP001340|pid:none) Caulobacter crescentus NA1000, ... 54 2e-06
AE017198_492(AE017198|pid:none) Lactobacillus johnsonii NCC 533,... 54 2e-06
CP000937_1762(CP000937|pid:none) Francisella philomiragia subsp.... 54 2e-06
CP000713_2289(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 54 2e-06
AP009178_176(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 54 2e-06
CP001620_2007(CP001620|pid:none) Corynebacterium kroppenstedtii ... 54 2e-06
BT035938_1(BT035938|pid:none) Zea mays full-length cDNA clone ZM... 54 2e-06
BX640446_79(BX640446|pid:none) Bordetella bronchiseptica strain ... 54 2e-06
FM178379_147(FM178379|pid:none) Aliivibrio salmonicida LFI1238 c... 53 3e-06
CP000139_2298(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 53 3e-06
AJ937746_1(AJ937746|pid:none) Malassezia sympodialis partial mRN... 53 3e-06
AE015928_677(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 53 3e-06
CP000127_2482(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 53 3e-06
AP006627_2763(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 53 3e-06
(P37395) RecName: Full=Thioredoxin; Short=Trx; &AF0221... 53 3e-06
BT053967_1(BT053967|pid:none) Zea mays full-length cDNA clone ZM... 53 3e-06
AY688958_1(AY688958|pid:none) Trypanosoma cruzi strain Tulahuen ... 53 3e-06
A55124(A55124)thioredoxin - Chloroflexus aurantiacus 53 3e-06
BT065894_1(BT065894|pid:none) Zea mays full-length cDNA clone ZM... 53 3e-06
AF095750_1(AF095750|pid:none) Arabidopsis thaliana thioredoxin m... 53 3e-06
CP000789_298(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 53 3e-06
FM954972_2873(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 53 3e-06
CP000498_688(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 53 3e-06
BA000031_3001(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 53 3e-06
AL732334_6(AL732334|pid:none) Oryza sativa genomic DNA, chromoso... 53 3e-06
CP000076_5889(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 53 4e-06
CP001055_484(CP001055|pid:none) Elusimicrobium minutum Pei191, c... 53 4e-06
EF585960_1(EF585960|pid:none) Sonneratia caseolaris isolate Sonn... 53 4e-06
CP000688_623(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 53 4e-06
CP000514_468(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 53 4e-06
CP001106_56(CP001106|pid:none) Eubacterium eligens ATCC 27750 pl... 53 4e-06
AJ965256_538(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 53 4e-06
CP000511_1803(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 53 4e-06
CP000240_190(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 53 4e-06
CP001230_1222(CP001230|pid:none) Persephonella marina EX-H1, com... 53 4e-06
CR382136_647(CR382136|pid:none) Debaryomyces hansenii strain CBS... 53 4e-06
EF148317_1(EF148317|pid:none) Populus trichocarpa x Populus delt... 53 4e-06
CP000157_2302(CP000157|pid:none) Erythrobacter litoralis HTCC259... 53 4e-06
(Q9ZP20) RecName: Full=Thioredoxin M-type, chloroplastic; ... 53 4e-06
CP001087_1222(CP001087|pid:none) Desulfobacterium autotrophicum ... 53 4e-06
CP000239_735(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp... 53 4e-06
EF585961_1(EF585961|pid:none) Sonneratia ovata isolate Sonnbu_75... 53 4e-06
CP000993_59(CP000993|pid:none) Borrelia recurrentis A1, complete... 53 4e-06
AK099517_1(AK099517|pid:none) Oryza sativa Japonica Group cDNA c... 53 4e-06
CP000976_61(CP000976|pid:none) Borrelia duttonii Ly, complete ge... 53 4e-06
EU952268_1(EU952268|pid:none) Zea mays clone 1273737 thioredoxin... 53 4e-06
BX640432_140(BX640432|pid:none) Bordetella parapertussis strain ... 53 4e-06
CP000232_903(CP000232|pid:none) Moorella thermoacetica ATCC 3907... 53 4e-06
EF148248_1(EF148248|pid:none) Populus trichocarpa x Populus delt... 53 4e-06
CP000124_2346(CP000124|pid:none) Burkholderia pseudomallei 1710b... 53 4e-06
CP001132_794(CP001132|pid:none) Acidithiobacillus ferrooxidans A... 53 4e-06
AM270402_20(AM270402|pid:none) Aspergillus niger contig An18c010... 53 4e-06
EU038260_1(EU038260|pid:none) Lactobacillus reuteri thioredoxin ... 53 4e-06
EU972958_1(EU972958|pid:none) Zea mays clone 390735 unknown mRNA. 53 4e-06
AP007281_1708(AP007281|pid:none) Lactobacillus reuteri JCM 1112 ... 52 5e-06
CS008397_1(CS008397|pid:none) Sequence 23 from Patent WO20050071... 52 5e-06
DQ401032_1(DQ401032|pid:none) Pseudomonas chlororaphis strain O6... 52 5e-06
CP001324_489(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 52 5e-06
BT003919_1(BT003919|pid:none) Arabidopsis thaliana clone RAFL15-... 52 5e-06
EU056813_1(EU056813|pid:none) Limonium bicolor thioredoxin mRNA,... 52 5e-06
(P0AA25) RecName: Full=Thioredoxin-1; Short=Trx-1; &(P... 52 5e-06
CP000822_118(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,... 52 5e-06
U16857_2(U16857|pid:none) Fusion cloning vector pTRXFUS, complet... 52 5e-06
EU953886_1(EU953886|pid:none) Zea mays clone 1448533 thioredoxin... 52 5e-06
BX640446_284(BX640446|pid:none) Bordetella bronchiseptica strain... 52 5e-06
AE014298_746(AE014298|pid:none) Drosophila melanogaster chromoso... 52 5e-06
AP009044_3043(AP009044|pid:none) Corynebacterium glutamicum R DN... 52 5e-06
M54881_1(M54881|pid:none) Escherichia coli thioredoxin (trxA) ge... 52 5e-06
AE017220_3821(AE017220|pid:none) Salmonella enterica subsp. ente... 52 5e-06
EU976156_1(EU976156|pid:none) Zea mays clone 679165 thioredoxin ... 52 5e-06
GM711552_1(GM711552|pid:none) Sequence 47 from Patent WO20080949... 52 5e-06
AE003852_302(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 52 5e-06
AX763726_1(AX763726|pid:none) Sequence 33 from Patent WO03040180... 52 5e-06
AP009510_11(AP009510|pid:none) Uncultured Termite group 1 bacter... 52 5e-06
CP001029_4856(CP001029|pid:none) Methylobacterium populi BJ001, ... 52 5e-06
CT573326_4954(CT573326|pid:none) Pseudomonas entomophila str. L4... 52 5e-06
EU970059_1(EU970059|pid:none) Zea mays clone 339213 thioredoxin ... 52 5e-06
AL646052_779(AL646052|pid:none) Ralstonia solanacearum GMI1000 c... 52 5e-06
CP001358_1183(CP001358|pid:none) Desulfovibrio desulfuricans sub... 52 5e-06
BX908798_379(BX908798|pid:none) Parachlamydia-related symbiont U... 52 5e-06
CP000828_5313(CP000828|pid:none) Acaryochloris marina MBIC11017,... 52 5e-06
AM286415_161(AM286415|pid:none) Yersinia enterocolitica subsp. e... 52 5e-06
AY456696_18(AY456696|pid:none) Arthrobacter aurescens strain TC1... 52 5e-06
CP000653_3969(CP000653|pid:none) Enterobacter sp. 638, complete ... 52 5e-06
CS008405_1(CS008405|pid:none) Sequence 31 from Patent WO20050071... 52 5e-06
AC007258_5(AC007258|pid:none) Arabidopsis thaliana chromosome I ... 52 5e-06
AP009552_279(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 52 5e-06
AE016958_1196(AE016958|pid:none) Mycobacterium avium subsp. para... 52 5e-06
AC007915_21(AC007915|pid:none) Genomic sequence for Arabidopsis ... 52 5e-06
CP000884_4887(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 52 5e-06
AE005174_4741(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 52 5e-06
(P12243) RecName: Full=Thioredoxin-1; Short=Trx-1; AltN... 52 7e-06
BX640414_260(BX640414|pid:none) Bordetella pertussis strain Toha... 52 7e-06
AK072821_1(AK072821|pid:none) Oryza sativa Japonica Group cDNA c... 52 7e-06
BT049711_1(BT049711|pid:none) Salmo salar clone ssal-evf-541-161... 52 7e-06
CP000393_2507(CP000393|pid:none) Trichodesmium erythraeum IMS101... 52 7e-06
AP008981_31(AP008981|pid:none) Orientia tsutsugamushi str. Ikeda... 52 7e-06
CP000084_481(CP000084|pid:none) Candidatus Pelagibacter ubique H... 52 7e-06
AJ970585_2(AJ970585|pid:none) Candidatus Phytoplasma solani ORF ... 52 7e-06
CP000103_2069(CP000103|pid:none) Nitrosospira multiformis ATCC 2... 52 7e-06
EF147316_1(EF147316|pid:none) Populus trichocarpa clone WS0122_J... 52 7e-06
CP001056_2729(CP001056|pid:none) Clostridium botulinum B str. Ek... 52 7e-06
(Q9ZP21) RecName: Full=Thioredoxin M-type, chloroplastic; ... 52 7e-06
CP000517_361(CP000517|pid:none) Lactobacillus helveticus DPC 457... 52 7e-06
CP000511_3947(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 52 7e-06
AC007087_14(AC007087|pid:none) Arabidopsis thaliana chromosome 2... 52 7e-06
CP000316_2221(CP000316|pid:none) Polaromonas sp. JS666, complete... 52 7e-06
AC144737_18(AC144737|pid:none) Oryza sativa (japonica cultivar-g... 52 7e-06
CP001601_2424(CP001601|pid:none) Corynebacterium aurimucosum ATC... 52 7e-06
CP000140_1864(CP000140|pid:none) Parabacteroides distasonis ATCC... 52 7e-06
EU016608_46(EU016608|pid:none) Uncultured marine microorganism H... 52 7e-06
BT049355_1(BT049355|pid:none) Salmo salar clone ssal-eve-504-203... 52 7e-06
EF083995_1(EF083995|pid:none) Picea sitchensis clone WS02713_G05... 52 7e-06
CU861906_784(CU861906|pid:none) Ralstonia solanacearum strain Mo... 52 7e-06
CP000908_4381(CP000908|pid:none) Methylobacterium extorquens PA1... 52 7e-06
CP000235_72(CP000235|pid:none) Anaplasma phagocytophilum HZ, com... 52 7e-06
CP000656_974(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, co... 52 7e-06
CP000113_6679(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 52 7e-06
BT079175_1(BT079175|pid:none) Esox lucius clone eluc-evq-530-028... 52 7e-06
CP000386_988(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 52 7e-06
CP001298_4701(CP001298|pid:none) Methylobacterium chloromethanic... 52 7e-06
CQ785710_1(CQ785710|pid:none) Sequence 23 from Patent WO20040186... 52 7e-06
CP001001_3329(CP001001|pid:none) Methylobacterium radiotolerans ... 52 7e-06
BT073907_1(BT073907|pid:none) Oncorhynchus mykiss clone omyk-evo... 52 9e-06
CP000580_5639(CP000580|pid:none) Mycobacterium sp. JLS, complete... 52 9e-06
CP000580_2452(CP000580|pid:none) Mycobacterium sp. JLS, complete... 52 9e-06
CP000386_2244(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 52 9e-06
CP000282_1329(CP000282|pid:none) Saccharophagus degradans 2-40, ... 52 9e-06
CP001349_1563(CP001349|pid:none) Methylobacterium nodulans ORS 2... 52 9e-06
CP000270_2070(CP000270|pid:none) Burkholderia xenovorans LB400 c... 52 9e-06
AJ239128_1(AJ239128|pid:none) Trypanosoma brucei brucei mRNA for... 52 9e-06
CP000155_1204(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 52 9e-06
CP000673_2331(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 52 9e-06
AM902716_1980(AM902716|pid:none) Bordetella petrii strain DSM 12... 52 9e-06
CP000668_3413(CP000668|pid:none) Yersinia pestis Pestoides F, co... 52 9e-06
CP000431_981(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 52 9e-06
(P23400) RecName: Full=Thioredoxin M-type, chloroplastic; ... 52 9e-06
AP009049_2100(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 52 9e-06
CP000086_2179(CP000086|pid:none) Burkholderia thailandensis E264... 52 9e-06
CP000524_1266(CP000524|pid:none) Bartonella bacilliformis KC583,... 52 9e-06
CP000030_61(CP000030|pid:none) Anaplasma marginale str. St. Mari... 52 9e-06
AP011115_718(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 52 9e-06
CP000142_3276(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 52 9e-06
CP000115_51(CP000115|pid:none) Nitrobacter winogradskyi Nb-255, ... 52 9e-06
CR555306_2681(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 52 9e-06
CP000804_3998(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 52 9e-06
CP000492_1660(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 52 9e-06
AE016823_1917(AE016823|pid:none) Leptospira interrogans serovar ... 52 9e-06
(P0A0K4) RecName: Full=Thioredoxin; Short=Trx; &(P0A0K... 52 9e-06
BT082484_1(BT082484|pid:none) Anoplopoma fimbria clone afim-evh-... 51 1e-05
(P0A616) RecName: Full=Thioredoxin; Short=Trx; AltName:... 51 1e-05
CP000828_4723(CP000828|pid:none) Acaryochloris marina MBIC11017,... 51 1e-05
CP000416_323(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 51 1e-05
AE017333_3005(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 51 1e-05
CP001348_2165(CP001348|pid:none) Clostridium cellulolyticum H10,... 51 1e-05
(P52231) RecName: Full=Thioredoxin; Short=Trx; &BA0000... 51 1e-05
AM902716_2565(AM902716|pid:none) Bordetella petrii strain DSM 12... 51 1e-05
CP001079_60(CP001079|pid:none) Anaplasma marginale str. Florida,... 51 1e-05
CP000087_2(CP000087|pid:none) Rickettsia bellii RML369-C, comple... 51 1e-05
DQ869238_1(DQ869238|pid:none) Acetobacter aceti thioredoxin (trx... 51 1e-05
CP000628_26(CP000628|pid:none) Agrobacterium radiobacter K84 chr... 51 1e-05
CP000828_1797(CP000828|pid:none) Acaryochloris marina MBIC11017,... 51 1e-05
BT056690_1(BT056690|pid:none) Salmo salar clone ssal-eve-542-050... 51 1e-05
AP006841_2179(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 51 1e-05
BA000039_810(BA000039|pid:none) Thermosynechococcus elongatus BP... 51 1e-05
EF585959_1(EF585959|pid:none) Sonneratia alba isolate Sonnbu_75_... 51 1e-05
CP000647_4230(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 51 1e-05
AP006725_130(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 51 1e-05
CP000783_3659(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 51 1e-05
CP001217_1425(CP001217|pid:none) Helicobacter pylori P12, comple... 51 1e-05
EF146784_1(EF146784|pid:none) Populus trichocarpa clone WS01213_... 51 1e-05
CP000583_70(CP000583|pid:none) Ostreococcus lucimarinus CCE9901 ... 51 1e-05
CU234118_83(CU234118|pid:none) Bradyrhizobium sp. ORS278,complet... 51 1e-05
(Q4L5F0) RecName: Full=Thioredoxin; Short=Trx; &AP0067... 51 1e-05
AE000511_1437(AE000511|pid:none) Helicobacter pylori 26695, comp... 51 1e-05
(P52228) RecName: Full=Thioredoxin C-3; &S70356(S70356) &U43655... 51 1e-05
A71817(A71817) probable thioredoxin - Helicobacter pylori (strai... 51 1e-05
AY596296_121(AY596296|pid:none) Haloarcula marismortui ATCC 4304... 51 1e-05
(Q5UR29) RecName: Full=Thioredoxin-like protein R548; &AY653733... 51 1e-05
EF165535_4(EF165535|pid:none) Rhizobium leguminosarum bv. trifol... 51 1e-05
CP000232_1634(CP000232|pid:none) Moorella thermoacetica ATCC 390... 51 1e-05
CU468135_195(CU468135|pid:none) Erwinia tasmaniensis strain ET1/... 51 1e-05
CP000239_2659(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 51 1e-05
BC166975_1(BC166975|pid:none) Xenopus tropicalis hypothetical pr... 51 1e-05
CP001114_2052(CP001114|pid:none) Deinococcus deserti VCD115, com... 51 1e-05
CP000393_3000(CP000393|pid:none) Trichodesmium erythraeum IMS101... 51 1e-05
BT053469_1(BT053469|pid:none) Medicago truncatula clone MTYFP_FQ... 51 1e-05
CP001344_150(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 51 1e-05
CP000542_1513(CP000542|pid:none) Verminephrobacter eiseniae EF01... 51 1e-05

>(P29447) RecName: Full=Thioredoxin-3; Short=Trx-3;
Length = 104

Score = 100 bits (250), Expect = 1e-20
Identities = 43/102 (42%), Positives = 66/102 (64%)
Frame = +2

Query: 41 MSRVTNVSINPKLDEFLKGAQVIINFGAEWCGACKVLEPIFNKLSTQYPLVTFLKVEIDK 220
MS+V +V+ N +LD++L+ +V+++F AEWCG C+ + P+F+KLS ++ TF+ V+IDK
Sbjct: 1 MSKVIHVTSNEELDKYLQHQRVVVDFSAEWCGPCRAIAPVFDKLSNEFTTFTFVHVDIDK 60

Query: 221 INVHESTKSITSIPTIMLYQKGKKTKEIVSPNETQLRKILDS 346
+N H K I S+PT Y G K E NE LR L++
Sbjct: 61 VNTHPIVKEIRSVPTFYFYVNGAKVSEFSGANEATLRSTLEA 102

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 569,514,723
Number of extensions: 10231061
Number of successful extensions: 31120
Number of sequences better than 10.0: 2244
Number of HSP's gapped: 30502
Number of HSP's successfully gapped: 2469
Length of query: 136
Length of database: 1,061,185,681
Length adjustment: 100
Effective length of query: 36
Effective length of database: 734,340,881
Effective search space: 26436271716
Effective search space used: 26436271716
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.94 gvh: 0.38 alm: 0.45 top: 0.73 tms: 0.00 mit: 0.41 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

56.0 %: mitochondrial
28.0 %: cytoplasmic
8.0 %: cytoskeletal
8.0 %: nuclear

>> prediction for Contig-U05501-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0