Contig-U05425-1
Contig ID Contig-U05425-1
Contig update 2001. 8.29
Contig sequence
>Contig-U05425-1 (Contig-U05425-1Q) /CSM_Contig/Contig-U05425-1Q.Seq.d
CTTATCAACCACCACAACCATCCCAACAACAACAACAACCATCCCAACAA
CAATCTTACCAACAATCATCTTCAACTGAATTCCCAAAATACCAAGAACC
ATATCAAGGTAACCTTTAAATAATTTTTTATTTATTTAAAAATCAAGACC
AAATGAAAATAA

Gap no gap
Contig length 162
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1253638
End point 1253800
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U05425
List of clone(s)

est1=SSI285F,1,163
Translated Amino Acid sequence
LINHHNHPNNNNNHPNNNLTNNHLQLNSQNTKNHIKVTFK*ffiylkiktk*k*


Translated Amino Acid sequence (All Frames)
Frame A:
LINHHNHPNNNNNHPNNNLTNNHLQLNSQNTKNHIKVTFK*ffiylkiktk*k*


Frame B:
lsttttiptttttipttilptiifn*ipkiprtisr*plnnflfi*ksrpnen


Frame C:
yqppqpsqqqqqpsqqqsyqqssstefpkyqepyqgnl*iifylfknqdqmki


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05425-1 (Contig-U05425-1Q)
/CSM_Contig/Contig-U05425-1Q.Seq.d
(162 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05425-1 (Contig-U05425-1Q) /CSM_Contig/Conti... 194 2e-50
Contig-U12702-1 (Contig-U12702-1Q) /CSM_Contig/Conti... 42 2e-04
Contig-U14360-1 (Contig-U14360-1Q) /CSM_Contig/Conti... 40 7e-04
Contig-U06416-1 (Contig-U06416-1Q) /CSM_Contig/Conti... 40 7e-04
Contig-U11859-1 (Contig-U11859-1Q) /CSM_Contig/Conti... 38 0.003
Contig-U11283-1 (Contig-U11283-1Q) /CSM_Contig/Conti... 38 0.003
Contig-U10513-1 (Contig-U10513-1Q) /CSM_Contig/Conti... 38 0.003
Contig-U10114-1 (Contig-U10114-1Q) /CSM_Contig/Conti... 38 0.003
Contig-U10064-1 (Contig-U10064-1Q) /CSM_Contig/Conti... 38 0.003
Contig-U10004-1 (Contig-U10004-1Q) /CSM_Contig/Conti... 38 0.003

>Contig-U05425-1 (Contig-U05425-1Q) /CSM_Contig/Contig-U05425-1Q.Seq.d
Length = 162

Score = 194 bits (98), Expect = 2e-50
Identities = 98/98 (100%)
Strand = Plus / Plus


Query: 65 atcatcttcaactgaattcccaaaataccaagaaccatatcaaggtaacctttaaataat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 atcatcttcaactgaattcccaaaataccaagaaccatatcaaggtaacctttaaataat 124


Query: 125 tttttatttatttaaaaatcaagaccaaatgaaaataa 162
||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tttttatttatttaaaaatcaagaccaaatgaaaataa 162


>Contig-U12702-1 (Contig-U12702-1Q) /CSM_Contig/Contig-U12702-1Q.Seq.d
Length = 901

Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 122 aattttttatttatttaaaaa 142
|||||||||||||||||||||
Sbjct: 901 aattttttatttatttaaaaa 881


>Contig-U14360-1 (Contig-U14360-1Q) /CSM_Contig/Contig-U14360-1Q.Seq.d
Length = 297

Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 124 ttttttatttatttaaaaat 143
||||||||||||||||||||
Sbjct: 272 ttttttatttatttaaaaat 253


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8739
Number of Sequences: 6905
Number of extensions: 8739
Number of successful extensions: 4660
Number of sequences better than 10.0: 817
length of query: 162
length of database: 5,674,871
effective HSP length: 15
effective length of query: 147
effective length of database: 5,571,296
effective search space: 818980512
effective search space used: 818980512
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 7.20
Homology vs DNA
Query= Contig-U05425-1 (Contig-U05425-1Q) /CSM_Contig/Contig-U05425-1Q.Seq.d
(162 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU073755) Dictyostelium discoideum slug cDNA, clone SSI285. 170 1e-38 1
(CR376789) Zebrafish DNA sequence from clone DKEYP-87A2 in l... 52 0.006 1
(BX950870) Zebrafish DNA sequence from clone DKEY-242M17 in ... 52 0.006 1
(CR734573) Tetraodon nigroviridis full-length cDNA. 52 0.006 1
(BH694882) BOHWW76TR BO_2_3_KB Brassica oleracea genomic clo... 52 0.006 1
(ES324088) SA_MX1_50a01_SP6 Dogfish Shark Multiple Tissues, ... 52 0.006 1
(AM439337) Vitis vinifera, whole genome shotgun sequence, co... 50 0.025 1
(AM429924) Vitis vinifera contig VV78X254909.21, whole genom... 50 0.025 1
(AY202424) AY202424 Arabidopsis thaliana Landsberg DNA Arabi... 50 0.025 1
(ET096770) QM0AAA24CG02FM1 CCL1 Citrus clementina genomic cl... 50 0.025 1
(ET096622) QM0AAA24BG02FM1 CCL1 Citrus clementina genomic cl... 50 0.025 1
(EK219679) 1095460136838 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.025 1
(CC066893) CSU-K33r.38G14.T7 CSU-K33r Aedes aegypti genomic ... 50 0.025 1
(CA756503) OA01A09_SK.ab1 OA Oryza sativa Japonica Group cDN... 50 0.025 1
(BP504794) Hydra magnipapillata cDNA, clone:hm_02264. 50 0.025 1
(AM456635) Vitis vinifera, whole genome shotgun sequence, co... 40 0.034 4
(BX928758) Zebrafish DNA sequence from clone DKEY-206M15 in ... 36 0.060 2
(CR387984) Zebrafish DNA sequence from clone DKEY-230E6 in l... 36 0.060 2
(FH519160) CHO_OF4807xh06r1.ab1 CHO_OF4 Nicotiana tabacum ge... 38 0.076 2
(GO070083) PmTwI43B01.scf PmTwI Penaeus monodon cDNA 3', mRN... 38 0.078 2
(BX664603) Zebrafish DNA sequence from clone CH211-127L8 in ... 48 0.097 1
(AC153133) Mus musculus BAC clone RP24-389O11 from chromosom... 48 0.097 1
(AC122886) Mus musculus BAC clone RP23-91G21 from 13, comple... 48 0.097 1
(CU302335) Medicago truncatula chromosome 5 clone mth2-155g2... 48 0.097 1
(AP010383) Lotus japonicus genomic DNA, chromosome 3, clone:... 48 0.097 1
(AP009791) Lotus japonicus genomic DNA, clone: LjT37I20, TM2... 48 0.097 1
(AM467922) Vitis vinifera contig VV78X048846.12, whole genom... 48 0.097 1
(AM459669) Vitis vinifera contig VV78X079096.6, whole genome... 48 0.097 1
(FP245495) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.097 1
(AC201357) Strongylocentrotus purpuratus clone R3-17B15, WOR... 48 0.097 1
(AC173097) Bos taurus clone CH240-269M11, WORKING DRAFT SEQU... 48 0.097 1
(AC165719) Bos taurus clone CH240-128D12, WORKING DRAFT SEQU... 48 0.097 1
(CE795726) tigr-gss-dog-17000317544499 Dog Library Canis lup... 48 0.097 1
(FI855659) UFG0093 Unfiltered ginseng genomic library (UFG) ... 44 0.19 2
(AC156338) Bos taurus clone CH240-48C12, WORKING DRAFT SEQUE... 38 0.22 2
(AG595634) Mus musculus molossinus DNA, clone:MSMg01-525O14.... 38 0.22 2
(AM476140) Vitis vinifera, whole genome shotgun sequence, co... 34 0.22 4
(CT010504) M.truncatula DNA sequence from clone MTH2-28A3 on... 34 0.23 2
(EJ362496) 1092963692167 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.28 2
(FH114198) CHO_OF3182xi04r1.ab1 CHO_OF3 Nicotiana tabacum ge... 36 0.28 2
(GO069676) PmTwI38E10.scf PmTwI Penaeus monodon cDNA 3', mRN... 36 0.29 2
(AC212922) Populus trichocarpa clone POP006-E02, complete se... 38 0.38 2
(CR384061) Zebrafish DNA sequence from clone CH211-182E10 in... 46 0.38 1
(AL954188) Zebrafish DNA sequence from clone DKEY-27J17. 46 0.38 1
(BV353370) S230P6141RA7.T0 Rottweiler Canis familiaris STS g... 46 0.38 1
(DQ162868) Phytophthora pseudosyringae strain IMI390500 cyto... 46 0.38 1
(CR932039) Medicago truncatula chromosome 5 clone mth2-6h11,... 46 0.38 1
(AY534691) Phytophthora pseudosyringae strain PSEU16 cytochr... 46 0.38 1
(AM486633) Vitis vinifera contig VV78X235844.5, whole genome... 46 0.38 1
(AM437452) Vitis vinifera contig VV78X156220.9, whole genome... 46 0.38 1
(AC216412) Populus trichocarpa clone POP035-I15, complete se... 46 0.38 1
(AC184089) Populus trichocarpa clone Pop1-58K16, complete se... 46 0.38 1
(AC182698) Populus trichocarpa clone Pop1-72E16, complete se... 46 0.38 1
(BD452780) Diagnosis of Diseases Associated with tumor suppr... 46 0.38 1
(AX251259) Sequence 227 from Patent WO0168912. 46 0.38 1
(AY456187) Argulus americanus mitochondrion, complete genome. 46 0.38 1
(AY308983) Neozeleboria femoratus 16S ribosomal RNA gene, pa... 46 0.38 1
(AY230977) Theridula opulenta 16S ribosomal RNA gene, partia... 46 0.38 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 0.38 1
(AC118444) Rattus norvegicus clone CH230-328O2, WORKING DRAF... 46 0.38 1
(AC106101) Rattus norvegicus clone CH230-142E20, WORKING DRA... 46 0.38 1
(CR848044) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.38 1
(AC231013) Bos taurus clone CH240-493O22, WORKING DRAFT SEQU... 46 0.38 1
(AC164861) Bos taurus clone CH240-151F15, *** SEQUENCING IN ... 46 0.38 1
(FT195893) Rattus norvegicus DNA, BAC clone: RNB2-407F10, 5'... 46 0.38 1
(FI760024) BOT01-119F13TR BOT01 Brassica oleracea genomic cl... 46 0.38 1
(ER586732) 1093015879133 Global-Ocean-Sampling_GS-36-01-01-2... 46 0.38 1
(ER439562) 1092963808304 Global-Ocean-Sampling_GS-35-01-01-1... 46 0.38 1
(EI882593) CAH1-62M4TV CAA1Ba Cicer arietinum genomic clone ... 46 0.38 1
(EI860088) CAH1-19E24TR CAA1Ba Cicer arietinum genomic clone... 46 0.38 1
(ED803734) MG__Bb0059N05f MG__Bb Mimulus guttatus genomic, g... 46 0.38 1
(DX485441) Cpl27173 Papaya Genomic DNA BAC Library Carica pa... 46 0.38 1
(DE384737) Bombyx mori genomic DNA, BAC clone:6K3B. 46 0.38 1
(CZ544327) SRAA-aad55c06.g1 Strongyloides ratti whole genome... 46 0.38 1
(BZ051267) jnr61g06.b1 B.oleracea001 Brassica oleracea genom... 46 0.38 1
(BX184891) Danio rerio genomic clone DKEY-190O5, genomic sur... 46 0.38 1
(BH980570) odd82e08.b1 B.oleracea002 Brassica oleracea genom... 46 0.38 1
(AG246246) Lotus japonicus DNA, clone:LjT18i10_not. 46 0.38 1
(DR511599) WS02730.CR_L07 SS-IL-A-FL-14 Picea sitchensis cDN... 46 0.38 1
(DN890492) nag34f06.x1 Rabbit eye minus lens and cornea. Unn... 46 0.38 1
(DC438275) Bombyx mori cDNA, clone:E_FL_epM-_23A14_F_0, 5' e... 46 0.38 1
(CU556798) Spc_21YK04 cDNA clone of Developmental Stages Lib... 46 0.38 1
(FM978249) Glossina morsitans morsitans EST, clone GMsg92h06... 46 0.38 1
(FD111398) CBZB14493.b1 CBZB: Normalized channel catfish cDN... 46 0.38 1
(FC996714) CBNG2934.b1 CBNG: Normalized channel catfish cDNA... 46 0.38 1
(EY391999) CAXA9578.fwd CAXA Helobdella robusta Subtracted L... 46 0.38 1
(AC233668) Medicago truncatula, pooled multiple clones, *** ... 40 0.63 3
(AM465520) Vitis vinifera contig VV78X198349.8, whole genome... 40 0.64 2
(CT525613) A BAC library has been constructed from cultivar ... 42 0.64 2
(EX612964) 255383392 Pea aphid whole body normalized full le... 36 0.68 2
(EJ907142) 1093018519054 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.72 2
(EJ527357) 1092955195445 Global-Ocean-Sampling_GS-29-01-01-1... 34 0.75 2
(EK002941) 1093030522483 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.79 2
(AC165994) Bos taurus clone CH240-165I10, WORKING DRAFT SEQU... 34 0.80 2
(EJ827000) 1093017565202 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.80 2
(BX537286) Zebrafish DNA sequence from clone DKEY-28J4 in li... 32 0.81 2
(AC011572) Homo sapiens clone RP11-12F16, WORKING DRAFT SEQU... 32 0.82 2
(EJ015605) 1095433016246 Global-Ocean-Sampling_GS-26-01-01-1... 34 0.82 2
(AC093767) Homo sapiens BAC clone RP11-107E21 from 4, comple... 32 0.82 2
(AC213420) Populus trichocarpa clone POP033-D24, complete se... 34 0.82 2
(AC219213) Solanum lycopersicum chromosome 6 clone C06HBa014... 32 0.83 2
(AC232800) Choloepus hoffmanni clone CH281-649O12, WORKING D... 32 0.83 2
(EJ356030) 1092963639615 Global-Ocean-Sampling_GS-28-01-01-1... 34 0.88 2
(AF044863) Pontia protodice large subunit ribosomal RNA gene... 34 1.0 2
(DT801052) 126472124 TL1 Tribolium castaneum cDNA clone 33E7... 32 1.1 2
(ES491916) HP00624 Biomphalaria glabrata resistant snail (BS... 34 1.1 2
(ES574832) FPS012.C7_I15 LSG10-01 Lymnaea stagnalis cDNA clo... 32 1.1 2
(FH099321) CHO_OF3039xm19r1.ab1 CHO_OF3 Nicotiana tabacum ge... 34 1.1 2
(ES575202) FPS012.CR_I15 LSG10-01 Lymnaea stagnalis cDNA clo... 32 1.1 2
(CX638513) UCRPT02_35D07_g Poncirus trifoliata Roots with Ir... 34 1.1 2
(CX638512) UCRPT02_35D07_b Poncirus trifoliata Roots with Ir... 34 1.1 2
(EI379151) POTD026TR Solanum tuberosum RHPOTKEY BAC ends Sol... 32 1.1 2
(AU284855) Dictyostelium discoideum gamete cDNA clone:FC-BN1... 32 1.1 2
(CZ821470) OC__Ba0200A21.r OC__Ba Oryza coarctata genomic cl... 36 1.1 2
(GO069924) PmTwI41D04.scf PmTwI Penaeus monodon cDNA 3', mRN... 36 1.1 2
(GO077161) PmTwN28H08.scf PmTwN Penaeus monodon cDNA 3', mRN... 36 1.1 2
(AC146994) Lytechinus variegatus clone BLV-41E13, WORKING DR... 38 1.1 3
(BM595408) 17000687448381 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 1.4 2
(CR854912) Zebrafish DNA sequence from clone DKEY-39O12 in l... 44 1.5 1
(CR774199) Zebrafish DNA sequence from clone CH211-42H24 in ... 44 1.5 1
(CR387926) Zebrafish DNA sequence from clone CH211-247J4 in ... 44 1.5 1
(BX649356) Zebrafish DNA sequence from clone CH211-209H5 in ... 44 1.5 1
(BX469934) Zebrafish DNA sequence from clone CH211-209P5 in ... 44 1.5 1
(BX323799) Zebrafish DNA sequence from clone CH211-159B19 in... 44 1.5 1
(AL672240) Mouse DNA sequence from clone RP23-27I16 on chrom... 44 1.5 1
(AC153356) Mus musculus BAC clone RP24-477I13 from chromosom... 44 1.5 1
(AC122825) Mus musculus BAC clone RP23-209E13 from 10, compl... 44 1.5 1
(EU082781) Cunninghamella blakesleeana internal transcribed ... 44 1.5 1
(EF650650) Solanum bulbocastanum clone BAC UW117J16 chromoso... 44 1.5 1
(EF197846) Arabidopsis halleri miR319a microRNA locus, genom... 44 1.5 1
(CR955009) Medicago truncatula chromosome 5 clone mth2-38i20... 44 1.5 1
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 44 1.5 1
(AM468374) Vitis vinifera contig VV78X026377.9, whole genome... 44 1.5 1
(AM456705) Vitis vinifera, whole genome shotgun sequence, co... 44 1.5 1
(AC208999) Populus trichocarpa clone POP021-B12, complete se... 44 1.5 1
(AC189498) Brassica rapa subsp. pekinensis clone KBrB086L12,... 44 1.5 1
(AC182654) Populus trichocarpa clone Pop1-121D13, complete s... 44 1.5 1
(AC135793) Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 44 1.5 1
(AC122726) Medicago truncatula chromosome 8 clone mth2-23o24... 44 1.5 1
(CS605016) Sequence 4002 from Patent WO2007039234. 44 1.5 1
(CS603368) Sequence 2354 from Patent WO2007039234. 44 1.5 1
(BD452854) Diagnosis of Diseases Associated with tumor suppr... 44 1.5 1
(BD428942) Method and nucleic acids for pharmacogenomic meth... 44 1.5 1
(AX348421) Sequence 116 from Patent WO0202806. 44 1.5 1
(AX346738) Sequence 1809 from Patent WO0200928. 44 1.5 1
(AX346531) Sequence 1602 from Patent WO0200928. 44 1.5 1
(AX345462) Sequence 533 from Patent WO0200928. 44 1.5 1
(AX251333) Sequence 301 from Patent WO0168912. 44 1.5 1
(GP416969) Sequence 63701 from patent US 7511127. 44 1.5 1
(GP130144) Sequence 63701 from patent US 7468248. 44 1.5 1
(AC208499) Canis familiaris, clone XX-89O2, complete sequence. 44 1.5 1
(AC188657) Canis familiaris chromosome X, clone XX-465H1, co... 44 1.5 1
(Z82071) Caenorhabditis elegans Cosmid W05B5. 44 1.5 1
(Y00145) Dictyostelium discoideum UDP glucose pyrophosphoryl... 44 1.5 1
(FJ710598) Bactrocera dorsalis clone gt.bactrocera_dorsalis.... 44 1.5 1
(EU443429) Ixodes pacificus isolate IpacCA2 16S ribosomal RN... 44 1.5 1
(AL844509) Plasmodium falciparum 3D7 chromosome 13. 44 1.5 1
(AJ005426) Lysiphlebus fabarum mitochondrial DNA for tRNA-Va... 44 1.5 1
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete... 44 1.5 1
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 44 1.5 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 44 1.5 1
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 44 1.5 1
(AC159914) Gorilla gorilla gorilla clone CH255-116D16, WORKI... 44 1.5 1
(AC159692) Bos taurus clone CH240-70M17, WORKING DRAFT SEQUE... 44 1.5 1
(AC131415) Rattus norvegicus clone CH230-203A7, *** SEQUENCI... 44 1.5 1
(AC123707) Mus musculus clone RP23-362I8, WORKING DRAFT SEQU... 44 1.5 1
(AC122113) Atelerix albiventris clone LB4-348O17, WORKING DR... 44 1.5 1
(AC120827) Rattus norvegicus clone CH230-247K11, *** SEQUENC... 44 1.5 1
(CU972398) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.5 1
(CR974446) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 1.5 1
(CR854901) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 1.5 1
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 44 1.5 1
(AC235813) Biomphalaria glabrata chromosome UNK clone BG_BBa... 44 1.5 1
(AC216662) Solanum lycopersicum chromosome 6 clone C06SLm004... 44 1.5 1
(AC183555) Canis lupus familiaris chromosome X clone XX-491M... 44 1.5 1
(AC181953) Strongylocentrotus purpuratus clone R3-1005C19, W... 44 1.5 1
(AC178677) Strongylocentrotus purpuratus clone R3-3007E13, W... 44 1.5 1
(AC177765) Strongylocentrotus purpuratus clone R3-1005H15, W... 44 1.5 1
(AC171394) Medicago truncatula clone mth2-38p7, WORKING DRAF... 44 1.5 1
(AC164247) Bos taurus clone CH240-134O4, *** SEQUENCING IN P... 44 1.5 1
(AC163487) Mus musculus chromosome 1 clone RP23-209D19 map 1... 44 1.5 1
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49... 44 1.5 1
(AK042044) Mus musculus 3 days neonate thymus cDNA, RIKEN fu... 44 1.5 1
(FH646180) CHO_OF4983xj08f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 1.5 1
(FH282899) CHO_OF4189xn15f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 1.5 1
(FH223056) CHO_OF3384xn21f1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 1.5 1
(ET947232) CHO_OF471xh24f1.ab1 CHO_OF Nicotiana tabacum geno... 44 1.5 1
(ET912135) CHO_OF201xe17r1.ab1 CHO_OF Nicotiana tabacum geno... 44 1.5 1
(ET718940) CHO_OF118xi15r1.ab1 CHO_OF Nicotiana tabacum geno... 44 1.5 1
(ET718857) CHO_OF118xi15f1.ab1 CHO_OF Nicotiana tabacum geno... 44 1.5 1
(ER431051) 1092963778070 Global-Ocean-Sampling_GS-35-01-01-1... 44 1.5 1
(ER321760) 1092344183400 Global-Ocean-Sampling_GS-34-01-01-1... 44 1.5 1
(EK338371) 1095467050829 Global-Ocean-Sampling_GS-31-01-01-1... 44 1.5 1
(EJ895560) 1093018465492 Global-Ocean-Sampling_GS-30-02-01-1... 44 1.5 1
(EJ718238) 1092959436134 Global-Ocean-Sampling_GS-30-02-01-1... 44 1.5 1
(EJ717907) 1092959434022 Global-Ocean-Sampling_GS-30-02-01-1... 44 1.5 1
(EJ646990) 1092344026677 Global-Ocean-Sampling_GS-30-02-01-1... 44 1.5 1
(EJ389565) 1092963896529 Global-Ocean-Sampling_GS-28-01-01-1... 44 1.5 1
(EI871624) CAH1-40E23TV CAA1Ba Cicer arietinum genomic clone... 44 1.5 1
(EI868588) CAH1-38N12TV CAA1Ba Cicer arietinum genomic clone... 44 1.5 1
(DU118680) KBrH102K10F Brassica rapa BAC library KBrH Brassi... 44 1.5 1
(CZ962821) 160752 Tomato MboI BAC Library Solanum lycopersic... 44 1.5 1
(CZ868462) OC__Ba0265M02.f OC__Ba Oryza coarctata genomic cl... 44 1.5 1
(CZ539704) SRAA-aad27c08.b1 Strongyloides ratti whole genome... 44 1.5 1
(CZ529784) SRAA-aac63b03.b1 Strongyloides ratti whole genome... 44 1.5 1
(CZ510847) GMW2-50J17a.b1 GMW2 Glycine max genomic, genomic ... 44 1.5 1
(CL871231) abe73g10.y1 Soybean methylation filtered genomic ... 44 1.5 1
(CE774124) tigr-gss-dog-17000315924915 Dog Library Canis lup... 44 1.5 1
(CE220009) tigr-gss-dog-17000326879649 Dog Library Canis lup... 44 1.5 1
(BZ387268) EINAT36TF EI_10_12_KB Entamoeba invadens genomic ... 44 1.5 1
(BZ060695) lkf22c02.g1 B.oleracea002 Brassica oleracea genom... 44 1.5 1
(BX214099) Danio rerio genomic clone DKEY-256E13, genomic su... 44 1.5 1
(AG321450) Mus musculus molossinus DNA, clone:MSMg01-107N06.... 44 1.5 1
(EG602887) EMBRYOF101124L12 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 44 1.5 1
(EC825194) SME00007478 esmbsro2 Sawyeria marylandensis cDNA,... 44 1.5 1
(EC823989) SME00009452 esmbsro2 Sawyeria marylandensis cDNA,... 44 1.5 1
(EC819944) SME00000128 esmbsro2 Sawyeria marylandensis cDNA,... 44 1.5 1
(EC819577) SME00007690 esmbsro2 Sawyeria marylandensis cDNA,... 44 1.5 1
(EC818994) SME00002054 esmbsro2 Sawyeria marylandensis cDNA,... 44 1.5 1
(EC324427) REPROTRACTF089704D20 POSSUM_01-POSSUM-C-REPROTRAC... 44 1.5 1
(EC291005) BRAINF089532F3 POSSUM_01-POSSUM-C-BRAIN-2KB Trich... 44 1.5 1
(EB581531) AGENCOURT_51486754 D. ananassae EST Drosophila an... 44 1.5 1
(DY594958) KIDNEYF074982A24 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 44 1.5 1
(CV126118) Hm_pupb_02G01_pBACe3.6_t7 Heliconius melpomene pu... 44 1.5 1
(CN557482) tae50e02.y1 Hydra EST Darmstadt I Hydra magnipapi... 44 1.5 1
(CK545540) rswhb0_016417.y1 swh Bombyx mori cDNA, mRNA seque... 44 1.5 1
(BM643601) 17000687312569 A.Gam.ad.cDNA1 Anopheles gambiae c... 44 1.5 1
(BJ379800) Dictyostelium discoideum cDNA clone:ddc36d01, 3' ... 44 1.5 1
(BG849031) 1024023F12.x2 C. reinhardtii CC-1690, normalized,... 44 1.5 1
(BB640501) Mus musculus 7 days neonate cerebellum cDNA, RIKE... 44 1.5 1
(FM938348) Brachionus plicatilis EST 5' end, clone sb104P004... 44 1.5 1
(FM914145) Brachionus plicatilis EST 5' end, clone sb102P001... 44 1.5 1
(FG006090) CBWU95081.g1 Yutaka Satou unpublished cDNA librar... 44 1.5 1
(EV417716) 210767686 NGP Nasonia giraulti cDNA clone 177C21 ... 44 1.5 1
(EV416811) 210761645 NGP Nasonia giraulti cDNA clone 177C21 ... 44 1.5 1
(ES630274) NGPSS87TR NGPP Nasonia giraulti cDNA, mRNA sequence. 44 1.5 1
(AE017245) Mycoplasma synoviae 53, complete genome. 44 1.5 1
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 44 1.5 1
(AE008384) Methanosarcina mazei strain Goe1, complete genome. 44 1.5 1
(AC198567) Spermophilus tridecemlineatus clone VMRC20-211M6,... 40 1.5 2
(BM594415) 17000668645149 A.Gam.ad.cDNA.blood1 Anopheles gam... 34 1.6 2
(AC157618) Atelerix albiventris clone LB4-417P13, WORKING DR... 40 1.6 2
(AC167030) Bos taurus clone CH240-188B6, WORKING DRAFT SEQUE... 40 1.7 3
(AC147886) Xenopus (Silurana) tropicalis clone CH216-134O16,... 36 1.7 2
(DX481991) Cpl23655 Papaya Genomic DNA BAC Library Carica pa... 40 1.8 2
(AF136752) Dictyostelium discoideum MybC (mybC) gene, promot... 40 1.8 2
(BM640657) 17000687283889 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 1.8 2
(BM593461) 17000687442952 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 1.8 2
(BM653419) 17000687378437 A.Gam.ad.cDNA1 Anopheles gambiae c... 34 1.9 2
(AM427291) Vitis vinifera contig VV78X052099.29, whole genom... 38 1.9 4
(BM636888) 17000687563029 A.Gam.ad.cDNA1 Anopheles gambiae c... 34 2.0 2
(BM623508) 17000687478845 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.0 2
(AX346787) Sequence 1858 from Patent WO0200928. 40 2.1 2
(BM637998) 17000687565386 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.1 2
(BM654957) 17000687385375 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.1 2
(BM603769) 17000659084100 A.Gam.ad.cDNA.blood1 Anopheles gam... 34 2.1 2
(BM645136) 17000687315724 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.2 2
(BM639717) 17000687573922 A.Gam.ad.cDNA1 Anopheles gambiae c... 34 2.2 2
(BM620663) 17000687445299 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.3 2
(BM586397) 17000687314685 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 2.3 2
(DQ150070) Pieris rapae voucher PRE1 16S ribosomal RNA gene,... 40 2.3 2
(BM595048) 17000687446232 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 2.3 2
(FP236133) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 2.4 4
(BM610376) 17000687110678 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 2.4 2
(BM636286) 17000668938423 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.4 2
(DD010735) Diagnosis of known genetic Parameters within the ... 30 2.4 2
(BM589063) 17000687370863 A.Gam.ad.cDNA.blood1 Anopheles gam... 34 2.4 2
(BM631921) 17000687503459 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.5 2
(BM624793) 17000659340072 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.5 2
(BM647730) 17000687324266 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.6 2
(BM612731) 17000687137008 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 2.6 2
(AC105880) Rattus norvegicus clone CH230-22H5, *** SEQUENCIN... 40 2.6 2
(BM649807) 17000687369887 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.6 2
(BM639282) 17000687569871 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.7 2
(BM608354) 17000687086335 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 2.7 2
(EG571973) AGENCOURT_89040316 NIH_ZGC_27 Danio rerio cDNA cl... 36 2.7 2
(BM650744) 17000687372491 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.7 2
(BM657629) 17000687437393 A.Gam.ad.cDNA1 Anopheles gambiae c... 34 2.8 2
(DE947267) Macropus eugenii DNA, BAC clone: MEB1-143P06_R, 3... 40 2.8 2
(BM647868) 17000687324473 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.8 2
(BM656314) 17000687387738 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 2.8 2
(AC230181) Bos taurus clone CH240-519C1, WORKING DRAFT SEQUE... 34 2.8 2
(BM600434) 17000687054155 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 2.8 2
(AC183498) Brassica oleracea, *** SEQUENCING IN PROGRESS ***. 30 2.8 2
(AX344561) Sequence 12 from Patent WO0200932. 30 2.8 2
(AC131165) Rattus norvegicus clone CH230-13C15, *** SEQUENCI... 34 2.8 2
(AC149710) Bos taurus clone CH240-519C1, WORKING DRAFT SEQUE... 34 2.9 2
(AC212786) Macaca mulatta BAC CH250-227D19 (Children's Hosp... 32 3.0 2
(BM623608) 17000687478978 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.0 2
(CT737272) Pig DNA sequence from clone CH242-71K23 on chromo... 34 3.0 2
(AC159481) Bos taurus clone CH240-71O20, WORKING DRAFT SEQUE... 36 3.0 3
(AC117959) Rattus norvegicus clone CH230-364H6, WORKING DRAF... 34 3.0 2
(AM438729) Vitis vinifera contig VV78X079238.3, whole genome... 40 3.0 2
(AC175090) Medicago truncatula clone mth2-156c19, complete s... 30 3.0 2
(CR937051) Rattus norvegicus chromosome 1 BAC CH230-394C12. 34 3.0 2
(AC149577) Medicago truncatula chromosome 2 BAC clone mth2-1... 30 3.0 2
(BX610027) Anopheles gambiae EST, clone AGAC244TR. 32 3.0 2
(AC167329) Medicago truncatula chromosome 7 BAC clone mte1-4... 30 3.0 2
(AC176796) Strongylocentrotus purpuratus clone R3-3106P6, WO... 30 3.0 2
(CT030031) Zebrafish DNA sequence from clone DKEY-247K7 in l... 32 3.0 2
(AC226074) Oryza minuta clone OM__Ba0065D05, *** SEQUENCING ... 30 3.1 2
(BM590280) 17000687380531 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.1 2
(DJ386652) Diagnosis of Diseases Associated with Metastasis. 40 3.1 2
(AX346145) Sequence 1216 from Patent WO0200928. 40 3.1 2
(AX281448) Sequence 112 from Patent WO0177376. 40 3.1 2
(BM592899) 17000687440999 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.1 2
(AX344562) Sequence 13 from Patent WO0200932. 30 3.1 2
(BM635720) 17000687559927 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.2 2
(CZ498555) GMW2-9G18a.g1 GMW2 Glycine max genomic, genomic s... 32 3.2 2
(BM622230) 17000687476005 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.2 2
(Z79754) Caenorhabditis elegans Cosmid F25H2. 34 3.2 2
(AM434804) Vitis vinifera contig VV78X033615.9, whole genome... 34 3.2 2
(BM619785) 17000687440892 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.2 2
(AM432362) Vitis vinifera contig VV78X003278.41, whole genom... 32 3.3 2
(CR536159) Anopheles gambiae EST, clone AGAFB93TR. 32 3.3 2
(BM636262) 17000668938279 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.3 2
(AM442837) Vitis vinifera contig VV78X107769.5, whole genome... 34 3.4 2
(BM576877) 17000687163028 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.4 2
(BM657049) 17000687436402 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.4 2
(BM608899) 17000687086867 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.4 2
(CR534620) Anopheles gambiae EST, clone AGAF158TR. 32 3.4 2
(BM637487) 17000687564483 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.4 2
(BM650458) 17000687371318 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.5 2
(AM485814) Vitis vinifera contig VV78X092304.5, whole genome... 32 3.5 2
(AC213959) Pteropus vampyrus clone CH279-293A11, WORKING DRA... 38 3.6 3
(AM471852) Vitis vinifera contig VV78X240006.4, whole genome... 34 3.6 2
(CU367848) Zebrafish DNA sequence from clone CH73-20H24 in l... 42 3.6 2
(BX606927) Anopheles gambiae EST, clone AGCBW89TR. 32 3.7 2
(BM615937) 17000687147533 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.7 2
(BX608256) Anopheles gambiae EST, clone AGABB79TR. 32 3.7 2
(BM628539) 17000687498700 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.7 2
(AM457001) Vitis vinifera contig VV78X244739.2, whole genome... 30 3.7 2
(BM651035) 17000687373177 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.7 2
(BM641085) 17000687307009 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.7 2
(AX346237) Sequence 1308 from Patent WO0200928. 34 3.8 2
(BM592314) 17000687437648 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.8 2
(BX618174) Anopheles gambiae EST, clone AGAE259TR. 32 3.8 2
(BX603994) Anopheles gambiae EST, clone AGCAV57TR. 32 3.8 2
(BX614419) Anopheles gambiae EST, clone AGACL90TR. 32 3.9 2
(BM629264) 17000687499876 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 3.9 2
(AC216765) Populus trichocarpa clone POP021-F16, complete se... 40 3.9 3
(BM582037) 17000687275319 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.9 2
(BM578584) 17000687165821 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.9 2
(BM589755) 17000668440353 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 3.9 2
(CL866974) Gma_01_B22_T7 Soybean Genome Shotgun Sequences Gl... 32 3.9 2
(FH374790) CHO_OF4266xe09r1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 3.9 2
(BH510222) BOGRM18TF BOGR Brassica oleracea genomic clone BO... 30 3.9 2
(CT541806) A BAC library has been constructed from cultivar ... 30 3.9 2
(FH391225) CHO_OF4778xe16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 3.9 2
(FI017079) CHO_OF6921xg20f1.ab1 CHO_OF6 Nicotiana tabacum ge... 32 3.9 2
(BZ058598) lky34d08.b1 B.oleracea002 Brassica oleracea genom... 30 4.0 2
(BX615404) Anopheles gambiae EST, clone AGAD613TR. 32 4.0 2
(EY326594) CAWY11703.rev CAWY Helobdella robusta Subtracted ... 34 4.0 2
(DX813043) MUGQ_CH252P058K23T7_GL455_086 CHORI-252 Vervet Mo... 34 4.0 2
(BM637110) 17000687563544 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.0 2
(EY326765) CAWY11817.rev CAWY Helobdella robusta Subtracted ... 34 4.0 2
(BH928610) odh96f02.b1 B.oleracea002 Brassica oleracea genom... 30 4.0 2
(CE349599) tigr-gss-dog-17000334164167 Dog Library Canis lup... 32 4.0 2
(BJ410506) Dictyostelium discoideum cDNA clone:ddv12e22, 5' ... 32 4.0 2
(AL672121) Mouse DNA sequence from clone RP23-256H2 on chrom... 42 4.0 3
(EL924424) NY4Th2_127_G03.b1_A039 NY4 theronts Ichthyophthir... 30 4.0 2
(BX606682) Anopheles gambiae EST, clone AGCBQ39TR. 32 4.0 2
(AC025016) Homo sapiens chromosome 11, clone RP11-302E22, co... 42 4.0 3
(BX611861) Anopheles gambiae EST, clone AGAAC84TR. 32 4.0 2
(FH507094) CHO_OF4700xf16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 4.0 2
(BM609975) 17000687108227 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.0 2
(CT518240) A BAC library has been constructed from cultivar ... 30 4.1 2
(BX611142) Anopheles gambiae EST, clone AGAA337TR. 32 4.1 2
(DN341514) LIB3550-005-P1-K1-G11 LIB3550 Canis lupus familia... 30 4.1 2
(BM599484) 17000687043256 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.1 2
(BZ465801) BONCP87TF BO_1.6_2_KB_tot Brassica oleracea genom... 32 4.2 2
(AM447003) Vitis vinifera contig VV78X106747.11, whole genom... 40 4.2 3
(BM646083) 17000687317867 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.2 2
(BM609598) 17000687105918 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.2 2
(BM621781) 17000687447704 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.2 2
(BM640029) 17000687629096 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.3 2
(BM590662) 17000687384091 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.3 2
(BM616978) 17000687150445 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.3 2
(BM644452) 17000687314264 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.3 2
(BM609154) 17000687087711 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.4 2
(BM641316) 17000687307626 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.4 2
(BM578105) 17000687164438 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.4 2
(BM641928) 17000687309016 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.4 2
(BM622263) 17000687476050 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.4 2
(BM637786) 17000687565093 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.4 2
(BM583432) 17000687278746 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.5 2
(BM637581) 17000687564726 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.5 2
(BM641752) 17000687308680 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.5 2
(BM600961) 17000687067143 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.5 2
(BM653538) 17000687378505 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.5 2
(BM591632) 17000687387506 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.5 2
(BM580049) 17000659322893 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.6 2
(BM630722) 17000687501832 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.6 2
(BM619720) 17000687440797 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.6 2
(BM586494) 17000687314976 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.6 2
(BM614028) 17000687140815 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.6 2
(BX768162) Anopheles gambiae EST, clone AGCDH50TR. 32 4.6 2
(BM617044) 17000687150529 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.6 2
(BM586351) 17000687312186 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.6 2
(AC217589) Populus trichocarpa clone POP062-G01, complete se... 42 4.6 2
(BX615355) Anopheles gambiae EST, clone AGAD555TR. 32 4.7 2
(BX609500) Anopheles gambiae EST, clone AGABR37TR. 32 4.7 2
(BM617723) 17000687159899 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.7 2
(BM584119) 17000687279899 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.7 2
(BX618605) Anopheles gambiae EST, clone AGAE788TR. 32 4.7 2
(BM625208) 17000687492515 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.7 2
(BM651230) 17000659183775 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.7 2
(BM593390) 17000687442323 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.8 2
(BX610875) Anopheles gambiae EST, clone AGACC55TRB. 32 4.8 2
(BM591195) 17000687385012 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.8 2
(BM606297) 17000687083170 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.8 2
(BM620038) 17000687442005 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.8 2
(BM652683) 17000687376817 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.9 2
(BM579474) 17000687238555 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 4.9 2
(AM452467) Vitis vinifera contig VV78X055900.5, whole genome... 38 4.9 2
(BM647649) 17000687324161 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 4.9 2
(AC216594) Populus trichocarpa clone POP017-A13, complete se... 38 4.9 2
(AC232500) Brassica rapa subsp. pekinensis clone KBrB055E21,... 40 4.9 2
(CR535997) Anopheles gambiae EST, clone AGAER36TR. 32 4.9 2
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI... 40 5.0 4
(BM646788) 17000687322911 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.0 2
(BM639698) 17000687573899 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.0 2
(BM633565) 17000687507437 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.1 2
(BM614453) 17000687142001 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.1 2
(BM582272) 17000687275629 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.1 2
(BX614171) Anopheles gambiae EST, clone AGACF64TR. 32 5.2 2
(AC181343) Strongylocentrotus purpuratus clone R3-115B12, WO... 38 5.2 3
(BM636489) 17000687561829 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.2 2
(BM575051) 17000658919672 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.2 2
(BX611148) Anopheles gambiae EST, clone AGAA344TR. 32 5.2 2
(CR536442) Anopheles gambiae EST, clone AGAFC85TR. 32 5.3 2
(BX617760) Anopheles gambiae EST, clone AGADW88TR. 32 5.3 2
(BX610574) Anopheles gambiae EST, clone AGACA75TRB. 32 5.3 2
(BM645454) 17000687316593 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.3 2
(BM631115) 17000687502368 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.3 2
(BX614381) Anopheles gambiae EST, clone AGACK88TR. 32 5.3 2
(CU929148) Zebrafish DNA sequence from clone CH73-202O5 in l... 38 5.3 3
(BM657610) 17000687437369 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.3 2
(BM641821) 17000687308773 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.3 2
(BM626726) 17000687495876 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.3 2
(BM605045) 17000687075518 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.3 2
(BX767163) Anopheles gambiae EST, clone AGCCL58TR. 32 5.3 2
(BM639685) 17000687573877 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.3 2
(AE014185) Plasmodium falciparum 3D7 chromosome 10, complete... 42 5.3 3
(BM649181) 17000687368281 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.4 2
(BM580516) 17000687242805 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.4 2
(BX767993) Anopheles gambiae EST, clone AGCDB91TR. 32 5.4 2
(BX617248) Anopheles gambiae EST, clone AGADR28TR. 32 5.4 2
(BX618888) Anopheles gambiae EST, clone AGAEB73TR. 32 5.4 2
(CR534652) Anopheles gambiae EST, clone AGAF206TR. 32 5.4 2
(BM590907) 17000687384428 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.4 2
(BM581089) 17000687243910 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.5 2
(BX610547) Anopheles gambiae EST, clone AGACA53TRB. 32 5.5 2
(BM637683) 17000687564966 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.5 2
(BM637536) 17000687564548 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.5 2
(BM584269) 17000687280089 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.5 2
(BM641770) 17000687308705 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.5 2
(BM583728) 17000687279176 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.5 2
(BX618106) Anopheles gambiae EST, clone AGAE159TR. 32 5.6 2
(BM576496) 17000687162524 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.6 2
(AC188644) Canis lupus familiaris chromosome X clone XX-375K... 36 5.6 4
(BX612976) Anopheles gambiae EST, clone AGAAR81TR. 32 5.6 2
(BM606074) 17000687081891 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.6 2
(BX603311) Anopheles gambiae EST, clone AGCAL75TR. 32 5.6 2
(BM654086) 17000687379934 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.6 2
(BM586456) 17000687314827 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.6 2
(AX345239) Sequence 310 from Patent WO0200928. 34 5.6 2
(BM628112) 17000687497879 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.6 2
(BX603514) Anopheles gambiae EST, clone AGCAO08TR. 32 5.6 2
(BM609848) 17000687107449 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.6 2
(BM605426) 17000687076323 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.6 2
(BM631111) 17000687502363 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.7 2
(BM637642) 17000687564912 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.7 2
(BM580764) 17000687243181 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.7 2
(BX767578) Anopheles gambiae EST, clone AGCDA41TR. 32 5.7 2
(BX614549) Anopheles gambiae EST, clone AGACQ57TR. 32 5.7 2
(BM654568) 17000687384654 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.7 2
(BM630545) 17000687501593 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.7 2
(BM648180) 17000687324893 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.8 2
(BM652681) 17000687376815 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.8 2
(BM638541) 17000687566784 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.8 2
(BM631583) 17000687503297 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.8 2
(BM640294) 17000687688858 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.8 2
(BM636909) 17000687563057 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.9 2
(BM611566) 17000687116105 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.9 2
(BM577622) 17000659322425 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.9 2
(BX769029) Anopheles gambiae EST, clone AGCDK83TR. 32 5.9 2
(BM630152) 17000687500966 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.9 2
(BX612702) Anopheles gambiae EST, clone AGAAO60TR. 32 5.9 2
(BM654725) 17000687385073 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 5.9 2
(BM602773) 17000687071691 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 5.9 2
(BX608028) Anopheles gambiae EST, clone AGAB846TR. 32 6.0 2
(BM634896) 17000687556198 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 6.0 2
(BM619124) 17000687439978 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 6.0 2
(BM600998) 17000687067187 A.Gam.ad.cDNA.blood1 Anopheles gam... 32 6.0 2
(BM637511) 17000687564518 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 6.0 2
(BM625165) 17000687492456 A.Gam.ad.cDNA1 Anopheles gambiae c... 32 6.0 2
(FP015958) Zebrafish DNA sequence from clone CH73-204P13 in ... 42 6.0 1
(EF594315) Astatotilapia burtoni clone BAC 32B18 Hoxda gene ... 42 6.0 1
(BV602306) S216P6355RF1.T0 Masuku Pan troglodytes troglodyte... 42 6.0 1

>(AU073755) Dictyostelium discoideum slug cDNA, clone SSI285.
Length = 163

Score = 170 bits (86), Expect = 1e-38
Identities = 86/86 (100%)
Strand = Plus / Plus


Query: 77 tgaattcccaaaataccaagaaccatatcaaggtaacctttaaataattttttatttatt 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tgaattcccaaaataccaagaaccatatcaaggtaacctttaaataattttttatttatt 136


Query: 137 taaaaatcaagaccaaatgaaaataa 162
||||||||||||||||||||||||||
Sbjct: 137 taaaaatcaagaccaaatgaaaataa 162

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 204,192,629
Number of extensions: 23184502
Number of successful extensions: 9806231
Number of sequences better than 10.0: 8528
Length of query: 162
Length of database: 104,622,809,269
Length adjustment: 22
Effective length of query: 140
Effective length of database: 102,296,446,593
Effective search space: 14321502523020
Effective search space used: 14321502523020
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 8. 1
Homology vs Protein
Query= Contig-U05425-1 (Contig-U05425-1Q) /CSM_Contig/Contig-U05425-1Q.Seq.d
(162 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 158,509,009
Number of extensions: 1975125
Number of successful extensions: 1501
Number of sequences better than 10.0: 0
Number of HSP's gapped: 1501
Number of HSP's successfully gapped: 0
Length of query: 54
Length of database: 1,061,185,681
Length adjustment: 27
Effective length of query: 27
Effective length of database: 972,937,585
Effective search space: 26269314795
Effective search space used: 26269314795
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 26 (14.6 bits)

PSORT

psg: 0.68 gvh: 0.15 alm: 0.74 top: 0.53 tms: 0.00 mit: 0.39 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
20.0 %: cytoplasmic
16.0 %: cytoskeletal
16.0 %: mitochondrial

>> prediction for Contig-U05425-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0