Contig-U05351-1
Contig ID Contig-U05351-1
Contig update 2001. 8.29
Contig sequence
>Contig-U05351-1 (Contig-U05351-1Q) /CSM_Contig/Contig-U05351-1Q.Seq.d
AGAGAATTAAAAAAGCACTAAGCGATTTAGATAATGCTACAGTATTAAAT
CAATTACCAATTTTAAGTAATGATTTAACAACTACTTGTGGTAGTAGTAG
CGGTAGTAGTAGTAATGATAATAATAATAATAATAATAAAAATAACAATC
AATATTCAACTCTTAATTTAATAGATGAATCAAATAATAGCACATCCAAT
TCTACAACATCACCATCACTATTAATTACAAGTTATAGACCATGGAGTAA
TACAGATTATTATAATAGAGTTAGAACATATACAATCTCAAATTG

Gap no gap
Contig length 295
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1877602
End point 1877897
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U05351
List of clone(s)

est1=SSH404F,1,296
Translated Amino Acid sequence
RIKKALSDLDNATVLNQLPILSNDLTTTCGSSSGSSSNDNNNNNNKNNNQYSTLNLIDES
NNSTSNSTTSPSLLITSYRPWSNTDYYNRVRTYTISN


Translated Amino Acid sequence (All Frames)
Frame A:
relkkh*ai*imlqy*inyqf*vmi*qllvvvvavvvvmiiiiiiikitiniqlli**mn
qiiahpilqhhhhy*lqvidhgviqiiiielehiqsqi


Frame B:
en*kstkrfr*cysiksitnfk**fnnylw***r************k*qsifns*fnr*i
k**hiqfynititinykl*tme*yrll**s*niynlkl


Frame C:
RIKKALSDLDNATVLNQLPILSNDLTTTCGSSSGSSSNDNNNNNNKNNNQYSTLNLIDES
NNSTSNSTTSPSLLITSYRPWSNTDYYNRVRTYTISN


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05351-1 (Contig-U05351-1Q)
/CSM_Contig/Contig-U05351-1Q.Seq.d
(295 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05351-1 (Contig-U05351-1Q) /CSM_Contig/Conti... 210 6e-55
Contig-U14516-1 (Contig-U14516-1Q) /CSM_Contig/Conti... 40 0.001
Contig-U14063-1 (Contig-U14063-1Q) /CSM_Contig/Conti... 36 0.020
Contig-U13845-1 (Contig-U13845-1Q) /CSM_Contig/Conti... 36 0.020
Contig-U12054-1 (Contig-U12054-1Q) /CSM_Contig/Conti... 36 0.020
Contig-U05407-1 (Contig-U05407-1Q) /CSM_Contig/Conti... 34 0.079
Contig-U14447-1 (Contig-U14447-1Q) /CSM_Contig/Conti... 32 0.31
Contig-U14180-1 (Contig-U14180-1Q) /CSM_Contig/Conti... 32 0.31
Contig-U11843-1 (Contig-U11843-1Q) /CSM_Contig/Conti... 32 0.31
Contig-U11054-1 (Contig-U11054-1Q) /CSM_Contig/Conti... 32 0.31

>Contig-U05351-1 (Contig-U05351-1Q) /CSM_Contig/Contig-U05351-1Q.Seq.d
Length = 295

Score = 210 bits (106), Expect = 6e-55
Identities = 106/106 (100%)
Strand = Plus / Plus


Query: 190 gcacatccaattctacaacatcaccatcactattaattacaagttatagaccatggagta 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcacatccaattctacaacatcaccatcactattaattacaagttatagaccatggagta 249


Query: 250 atacagattattataatagagttagaacatatacaatctcaaattg 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atacagattattataatagagttagaacatatacaatctcaaattg 295


Score = 176 bits (89), Expect = 9e-45
Identities = 89/89 (100%)
Strand = Plus / Plus


Query: 1 agagaattaaaaaagcactaagcgatttagataatgctacagtattaaatcaattaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagaattaaaaaagcactaagcgatttagataatgctacagtattaaatcaattaccaa 60


Query: 61 ttttaagtaatgatttaacaactacttgt 89
|||||||||||||||||||||||||||||
Sbjct: 61 ttttaagtaatgatttaacaactacttgt 89


>Contig-U14516-1 (Contig-U14516-1Q) /CSM_Contig/Contig-U14516-1Q.Seq.d
Length = 642

Score = 40.1 bits (20), Expect = 0.001
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 43 tattaaatcaattaccaatt 62
||||||||||||||||||||
Sbjct: 552 tattaaatcaattaccaatt 571


>Contig-U14063-1 (Contig-U14063-1Q) /CSM_Contig/Contig-U14063-1Q.Seq.d
Length = 567

Score = 36.2 bits (18), Expect = 0.020
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 260 ttataatagagttagaacatat 281
||||||||||||||||| ||||
Sbjct: 228 ttataatagagttagaaaatat 249


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3557
Number of Sequences: 6905
Number of extensions: 3557
Number of successful extensions: 1114
Number of sequences better than 10.0: 133
length of query: 295
length of database: 5,674,871
effective HSP length: 15
effective length of query: 280
effective length of database: 5,571,296
effective search space: 1559962880
effective search space used: 1559962880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 7.19
Homology vs DNA
Query= Contig-U05351-1 (Contig-U05351-1Q) /CSM_Contig/Contig-U05351-1Q.Seq.d
(295 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU073507) Dictyostelium discoideum slug cDNA, clone SSH404. 232 2e-80 2
(EY371907) CAXA13715.rev CAXA Helobdella robusta Subtracted ... 54 0.003 1
(AC113755) Rattus norvegicus clone CH230-193C1, *** SEQUENCI... 52 0.012 1
(AC095303) Rattus norvegicus clone CH230-36O20, WORKING DRAF... 52 0.012 1
(EY347440) CAWZ15618.rev CAWZ Helobdella robusta Primary Lat... 52 0.012 1
(AC109982) Rattus norvegicus clone CH230-80I18, WORKING DRAF... 48 0.015 2
(AC177514) Strongylocentrotus purpuratus clone R3-1027I05, W... 34 0.031 2
(CU459192) Zebrafish DNA sequence from clone CH73-187L10 in ... 50 0.048 1
(AC114113) Rattus norvegicus clone CH230-186O3, WORKING DRAF... 50 0.048 1
(AC112556) Rattus norvegicus clone CH230-9M1, WORKING DRAFT ... 50 0.048 1
(AC112456) Rattus norvegicus clone CH230-110N23, *** SEQUENC... 50 0.048 1
(CU655894) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.048 1
(CU582777) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.048 1
(AC202150) Zea mays chromosome 1 clone ZMMBBb-320G12; ZMMBBb... 50 0.048 1
(AC200947) Strongylocentrotus purpuratus clone R3-1039N19, W... 50 0.048 1
(AC181804) Strongylocentrotus purpuratus clone R3-1026N22, W... 50 0.048 1
(AC181566) Strongylocentrotus purpuratus clone R3-1109I22, W... 50 0.048 1
(AC175925) Strongylocentrotus purpuratus clone R3-3043K20, W... 50 0.048 1
(EH084205) PMEA304TO Perkinsus marinus large insert cDNA lib... 50 0.048 1
(EX152655) cs_GA0063.A08 Coho salmon perinucleolus and corti... 50 0.048 1
(EX152607) cs_GA0063.D01 Coho salmon perinucleolus and corti... 50 0.048 1
(AC149996) Strongylocentrotus purpuratus clone R3-60F3, WORK... 48 0.13 2
(AC181032) Strongylocentrotus purpuratus clone R3-3051A12, W... 48 0.14 2
(CU138544) Zebrafish DNA sequence from clone CH211-180P3 in ... 48 0.19 1
(CR854987) Zebrafish DNA sequence from clone CH211-185J22 in... 48 0.19 1
(DL109151) Diagnosis of existing illnesses or that praedispo... 48 0.19 1
(DL109150) Diagnosis of existing illnesses or that praedispo... 48 0.19 1
(DL032516) Diagnosis of existing illnesses or that praedispo... 48 0.19 1
(DL032515) Diagnosis of existing illnesses or that praedispo... 48 0.19 1
(GM644980) Sequence 23502 from Patent EP1942197. 48 0.19 1
(GM644979) Sequence 23501 from Patent EP1942197. 48 0.19 1
(FN357360) Schistosoma mansoni genome sequence supercontig S... 48 0.19 1
(AC109874) Rattus norvegicus clone CH230-306H13, *** SEQUENC... 48 0.19 1
(AC105484) Rattus norvegicus clone CH230-57H3, *** SEQUENCIN... 48 0.19 1
(AC098211) Rattus norvegicus clone CH230-208L16, WORKING DRA... 48 0.19 1
(AC212755) Zea mays chromosome 4 clone CH201-149O13; ZMMBBc0... 48 0.19 1
(AC201355) Strongylocentrotus purpuratus clone R3-17B10, WOR... 48 0.19 1
(AC184114) Zea mays chromosome 4 clone ZMMBBb-623M16; ZMMBBb... 48 0.19 1
(AC181422) Strongylocentrotus purpuratus clone R3-1112C5, WO... 48 0.19 1
(AC181418) Strongylocentrotus purpuratus clone R3-50C13, WOR... 48 0.19 1
(AC180344) Strongylocentrotus purpuratus clone R3-3116G4, WO... 48 0.19 1
(AC179908) Strongylocentrotus purpuratus clone R3-1003I5, WO... 48 0.19 1
(AC179072) Strongylocentrotus purpuratus clone R3-4009F23, W... 48 0.19 1
(AC178730) Strongylocentrotus purpuratus clone R3-13D8, WORK... 48 0.19 1
(AC178710) Strongylocentrotus purpuratus clone R3-3006E16, W... 48 0.19 1
(AC178028) Strongylocentrotus purpuratus clone R3-3055I6, WO... 48 0.19 1
(AC177634) Strongylocentrotus purpuratus clone R3-1020G3, WO... 48 0.19 1
(AC177545) Strongylocentrotus purpuratus clone R3-1026N2, WO... 48 0.19 1
(AC177151) Strongylocentrotus purpuratus clone R3-4015A11, W... 48 0.19 1
(AC177095) Strongylocentrotus purpuratus clone R3-4012I16, W... 48 0.19 1
(AC177051) Strongylocentrotus purpuratus clone R3-4004A2, WO... 48 0.19 1
(AC176835) Strongylocentrotus purpuratus clone R3-3112A23, W... 48 0.19 1
(AC176734) Strongylocentrotus purpuratus clone R3-3096O20, W... 48 0.19 1
(AC176681) Strongylocentrotus purpuratus clone R3-3088B04, W... 48 0.19 1
(AC176510) Strongylocentrotus purpuratus clone R3-3072O6, WO... 48 0.19 1
(AC176117) Strongylocentrotus purpuratus clone R3-3023E5, WO... 48 0.19 1
(AC176105) Strongylocentrotus purpuratus clone R3-3023I16, W... 48 0.19 1
(AC174224) Strongylocentrotus purpuratus clone R3-53C20, WOR... 48 0.19 1
(AC168777) Strongylocentrotus purpuratus clone R3-13M22, WOR... 48 0.19 1
(AC168767) Strongylocentrotus purpuratus clone R3-13P3, WORK... 48 0.19 1
(ER557649) 1093015723964 Global-Ocean-Sampling_GS-36-01-01-2... 48 0.19 1
(ER323089) 1092344191039 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.19 1
(ER260241) 1095527042189 Global-Ocean-Sampling_GS-33-01-01-1... 48 0.19 1
(EK770327) 1093017112688 Global-Ocean-Sampling_GS-33-01-01-1... 48 0.19 1
(DX940243) CHORI105-28J17.TR CHORI105.pEpiFOS5 Trypanosoma c... 48 0.19 1
(DH507228) Monosiga ovata DNA, fosmid clone: MOF-079H20, gen... 48 0.19 1
(DE879943) Macropus eugenii DNA, BAC clone: MEB1-052M16_R, 3... 48 0.19 1
(EG683936) RCRAQ58TO Castor bean cDNA library from roots, 1.... 48 0.19 1
(EG606919) KIDNEYF098375K4 POSSUM_01-POSSUM-KIDNEY-2KB Trich... 48 0.19 1
(EC350133) LIVERF089515K10 POSSUM_01-POSSUM-LIVER-2KB Tricho... 48 0.19 1
(EC349106) LIVERF091695M17 POSSUM_01-POSSUM-LIVER-2KB Tricho... 48 0.19 1
(EC338026) KIDNEYF089472D19 POSSUM_01-POSSUM-KIDNEY-2KB Tric... 48 0.19 1
(EC319940) EMBRYOF088886F18 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 48 0.19 1
(DY604302) LIVERF046768K18 POSSUM_01-POSSUM-LIVER-2KB Tricho... 48 0.19 1
(DV313304) NABOY69TRB Aedes aegypti infected with Brugia Mal... 48 0.19 1
(DV313303) NABOY69TF Aedes aegypti infected with Brugia Mala... 48 0.19 1
(DV295232) NABNS81TRB Aedes aegypti infected with Brugia Mal... 48 0.19 1
(DV295230) NABNS81TF Aedes aegypti infected with Brugia Mala... 48 0.19 1
(DV266773) AEDBI61TO Aedes re-sequencing Aedes aegypti cDNA ... 48 0.19 1
(DV266772) AEDBI61TF Aedes re-sequencing Aedes aegypti cDNA ... 48 0.19 1
(BM655800) 17000687386947 A.Gam.ad.cDNA1 Anopheles gambiae c... 48 0.19 1
(BM633240) 17000687506913 A.Gam.ad.cDNA1 Anopheles gambiae c... 48 0.19 1
(EY348268) CAWZ1640.fwd CAWZ Helobdella robusta Primary Late... 48 0.19 1
(EY343498) CAWZ12531.fwd CAWZ Helobdella robusta Primary Lat... 48 0.19 1
(EY343497) CAWZ12531.rev CAWZ Helobdella robusta Primary Lat... 48 0.19 1
(EY326280) CAWY1149.rev CAWY Helobdella robusta Subtracted E... 48 0.19 1
(AC214101) Populus trichocarpa clone POP114-A12, complete se... 44 0.26 2
(BX571880) Zebrafish DNA sequence from clone DKEY-29L4 in li... 36 0.41 2
(CR847561) Zebrafish DNA sequence from clone DKEY-35P16 in l... 46 0.51 2
(AC179323) Strongylocentrotus purpuratus clone R3-1102N20, W... 40 0.65 2
(DQ481664) Takifugu rubripes HoxAb gene cluster, complete se... 46 0.74 1
(CU928045) Zebrafish DNA sequence from clone CH73-244B10 in ... 46 0.74 1
(CR385061) Zebrafish DNA sequence from clone BUSM1-20K6. 46 0.74 1
(BX908797) Zebrafish DNA sequence from clone DKEY-43P13 in l... 46 0.74 1
(BX663517) Zebrafish DNA sequence from clone CH211-145E12 in... 46 0.74 1
(BX537304) Zebrafish DNA sequence from clone CH211-283H6 in ... 46 0.74 1
(BX470087) Zebrafish DNA sequence from clone CH211-202A10 in... 46 0.74 1
(BX323858) Zebrafish DNA sequence from clone DKEY-102F10 in ... 46 0.74 1
(AL592077) Zebrafish DNA sequence from clone XX-DZ35C18. 46 0.74 1
(CT009717) Mouse DNA sequence from clone RP23-216H9 on chrom... 46 0.74 1
(AL683845) Mouse DNA sequence from clone RP23-423B1 on chrom... 46 0.74 1
(AJ421479) Mus musculus X-inactivation center region; segmen... 46 0.74 1
(AC159820) Mus musculus BAC clone RP23-158K20 from chromosom... 46 0.74 1
(AC154248) Mus musculus BAC clone RP24-182I14 from chromosom... 46 0.74 1
(AC153978) Mus musculus 10 BAC RP24-217I1 (Roswell Park Canc... 46 0.74 1
(AC141377) Rattus norvegicus NOVECTOR CH230-259J22 (Childre... 46 0.74 1
(AC115013) Mus musculus chromosome 10, clone RP24-193P19, co... 46 0.74 1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 46 0.74 1
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s... 46 0.74 1
(AY112746) Pfiesteria piscicida small subunit ribosomal RNA ... 46 0.74 1
(FB571369) Sequence 236 from Patent EP1865317. 46 0.74 1
(FB571313) Sequence 180 from Patent EP1865317. 46 0.74 1
(FB571266) Sequence 133 from Patent EP1865317. 46 0.74 1
(GN009090) Sequence 1531 from Patent EP2014669. 46 0.74 1
(EU339633) Neovison vison microsatellite Mvi6028 sequence. 46 0.74 1
(U26721) Drosophila virilis sodium channel protein (para) ge... 46 0.74 1
(FN371438) Schistosoma mansoni genome sequence supercontig S... 46 0.74 1
(FN360806) Schistosoma mansoni genome sequence supercontig S... 46 0.74 1
(FN357725) Schistosoma mansoni genome sequence supercontig S... 46 0.74 1
(EU119383) Achatinella sowerbyana clone AS46 microsatellite ... 46 0.74 1
(AY764183) Aplysia californica syntaxin mRNA, complete cds. 46 0.74 1
(AM910995) Plasmodium knowlesi strain H chromosome 13, compl... 46 0.74 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 46 0.74 1
(AP006309) Homo sapiens genomic DNA, chromosome 3 clone:RP11... 46 0.74 1
(AC150631) Zea mays clone ZMMBBc0109E01, *** SEQUENCING IN P... 46 0.74 1
(AC149911) Strongylocentrotus purpuratus clone R3-12A16, WOR... 46 0.74 1
(AC146997) Arbacia punctulata clone BAP-144G2, WORKING DRAFT... 46 0.74 1
(AC135039) Rattus norvegicus clone CH230-178I12, WORKING DRA... 46 0.74 1
(AC130505) Rattus norvegicus clone CH230-169D16, WORKING DRA... 46 0.74 1
(AC129359) Rattus norvegicus clone CH230-406D8, WORKING DRAF... 46 0.74 1
(AC128823) Rattus norvegicus clone CH230-492P4, *** SEQUENCI... 46 0.74 1
(AC123959) Rattus norvegicus clone CH230-406B7, *** SEQUENCI... 46 0.74 1
(AC123110) Rattus norvegicus clone CH230-208F13, *** SEQUENC... 46 0.74 1
(AC117852) Rattus norvegicus clone CH230-149B22, *** SEQUENC... 46 0.74 1
(AC117054) Rattus norvegicus clone CH230-83N1, WORKING DRAFT... 46 0.74 1
(AC116294) Rattus norvegicus clone CH230-287P4, *** SEQUENCI... 46 0.74 1
(AC111583) Rattus norvegicus clone CH230-81I13, *** SEQUENCI... 46 0.74 1
(AC111403) Rattus norvegicus clone CH230-95P17, WORKING DRAF... 46 0.74 1
(AC110987) Rattus norvegicus clone CH230-190O18, *** SEQUENC... 46 0.74 1
(AC107599) Rattus norvegicus clone CH230-92G12, *** SEQUENCI... 46 0.74 1
(AC105864) Rattus norvegicus clone CH230-100C23, *** SEQUENC... 46 0.74 1
(AC105547) Rattus norvegicus clone CH230-201N9, WORKING DRAF... 46 0.74 1
(AC096453) Rattus norvegicus clone CH230-41P1, WORKING DRAFT... 46 0.74 1
(FJ423034) Salmo salar clone BAC 494J15, *** SEQUENCING IN P... 46 0.74 1
(CU207244) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.74 1
(AC207784) Zea mays chromosome 1 clone CH201-120E24; ZMMBBc0... 46 0.74 1
(AC201523) Strongylocentrotus purpuratus clone R3-3090A13, W... 46 0.74 1
(AC201177) Strongylocentrotus purpuratus clone R3-14M6, WORK... 46 0.74 1
(AC196090) Zea mays chromosome 9 clone CH201-345I17; ZMMBBc0... 46 0.74 1
(AC191593) Zea mays chromosome 9 clone CH201-109E1; ZMMBBc01... 46 0.74 1
(AC186898) Zea mays chromosome 6 clone CH201-37I9; ZMMBBc003... 46 0.74 1
(AC184507) Strongylocentrotus purpuratus clone R3-28M19, WOR... 46 0.74 1
(AC184188) Strongylocentrotus purpuratus clone R3-4015O13, W... 46 0.74 1
(AC183653) Aplysia californica clone XX-8158B7, *** SEQUENCI... 46 0.74 1
(AC181836) Strongylocentrotus purpuratus clone R3-1022L20, W... 46 0.74 1
(AC181045) Strongylocentrotus purpuratus clone R3-3050I12, W... 46 0.74 1
(AC180219) Strongylocentrotus purpuratus clone R3-38A2, WORK... 46 0.74 1
(AC179952) Strongylocentrotus purpuratus clone R3-20P10, WOR... 46 0.74 1
(AC179853) Strongylocentrotus purpuratus clone R3-1007J16, W... 46 0.74 1
(AC179823) Strongylocentrotus purpuratus clone R3-1012M2, WO... 46 0.74 1
(AC179748) Strongylocentrotus purpuratus clone R3-1018E11, W... 46 0.74 1
(AC179678) Strongylocentrotus purpuratus clone R3-60A5, WORK... 46 0.74 1
(AC178810) Strongylocentrotus purpuratus clone R3-22H02, WOR... 46 0.74 1
(AC178236) Strongylocentrotus purpuratus clone R3-3086B24, W... 46 0.74 1
(AC177989) Strongylocentrotus purpuratus clone R3-3051J10, W... 46 0.74 1
(AC177681) Strongylocentrotus purpuratus clone R3-1014B2, WO... 46 0.74 1
(AC177395) Strongylocentrotus purpuratus clone R3-53G21, WOR... 46 0.74 1
(AC177284) Strongylocentrotus purpuratus clone R3-1033H21, W... 46 0.74 1
(AC176693) Strongylocentrotus purpuratus clone R3-3088G04, W... 46 0.74 1
(AC176682) Strongylocentrotus purpuratus clone R3-3088B12, W... 46 0.74 1
(AC176650) Strongylocentrotus purpuratus clone R3-112N12, WO... 46 0.74 1
(AC176416) Strongylocentrotus purpuratus clone R3-12I3, WORK... 46 0.74 1
(AC176360) Strongylocentrotus purpuratus clone R3-3053I23, W... 46 0.74 1
(AC176318) Strongylocentrotus purpuratus clone R3-3054G14, W... 46 0.74 1
(AC176270) Strongylocentrotus purpuratus clone R3-3060A13, W... 46 0.74 1
(AC175914) Strongylocentrotus purpuratus clone R3-12O17, WOR... 46 0.74 1
(AC172421) Strongylocentrotus purpuratus clone R3-14J17, WOR... 46 0.74 1
(BH371981) AG-ND-165P4.TF ND-TAM Anopheles gambiae genomic c... 46 0.74 1
(AQ855080) CpG1955A CpIOWAgDNA1 Cryptosporidium parvum genom... 46 0.74 1
(FH696510) CHO_OF5133xn18f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 0.74 1
(FH695689) CHO_OF5128xh08r1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 0.74 1
(ET816817) CHO_OF776xf20f1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.74 1
(ET017547) MUGQ_CH252P323C01T7_CP604_013 CHORI-252 Vervet Mo... 46 0.74 1
(ER184967) 1095522257749 Global-Ocean-Sampling_GS-33-01-01-1... 46 0.74 1
(EK598898) 1092344271396 Global-Ocean-Sampling_GS-33-01-01-1... 46 0.74 1
(EK541789) 1095516062371 Global-Ocean-Sampling_GS-32-01-01-1... 46 0.74 1
(EJ944189) 1093018903947 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.74 1
(DX951885) CHORI105-45N11.TR CHORI105.pEpiFOS5 Trypanosoma c... 46 0.74 1
(DH490459) Monosiga ovata DNA, fosmid clone: MOF-050H10, gen... 46 0.74 1
(DH489037) Monosiga ovata DNA, fosmid clone: MOF-048A19, gen... 46 0.74 1
(DH488467) Monosiga ovata DNA, fosmid clone: MOF-047A19, gen... 46 0.74 1
(DH474263) Monosiga ovata DNA, fosmid clone: MOF-022H11, gen... 46 0.74 1
(DH434106) Macropus eugenii DNA with T3 primer, fosmid clone... 46 0.74 1
(DE585678) Bombyx mori genomic DNA, Fosmid clone:GBMFno237_g... 46 0.74 1
(DE363852) Bombyx mori genomic DNA, BAC clone:BET_608_P01. 46 0.74 1
(CR499057) mth2-175P17RM1 BAC end, cultivar Jemalong A17 of ... 46 0.74 1
(AG529743) Mus musculus molossinus DNA, clone:MSMg01-439F24.... 46 0.74 1
(CE612574) tigr-gss-dog-17000313547715 Dog Library Canis lup... 46 0.74 1
(CC998001) ZUAAW33TV ZM_3.0_4.0_KB Zea mays genomic clone ZM... 46 0.74 1
(CC037692) 3591_1_89_1_E07.2EL_x_1 3591 - RescueMu Grid P Ze... 46 0.74 1
(BZ278262) CH230-343N5.TV CHORI-230 Segment 2 Rattus norvegi... 46 0.74 1
(BX157011) Danio rerio genomic clone DKEY-152N9, genomic sur... 46 0.74 1
(EH256759) JGI_ACAC2870.rev ACAC Phakopsora pachyrhizi TW72-... 46 0.74 1
(DW628065) CLJ353-I08.y1d-s SHGC-CLJ2 Gasterosteus aculeatus... 46 0.74 1
(DW628064) CLJ353-I08.x1d-t SHGC-CLJ2 Gasterosteus aculeatus... 46 0.74 1
(DW620574) CLJ317-D03.x1d-t SHGC-CLJ2 Gasterosteus aculeatus... 46 0.74 1
(DT987805) CLJ233-E02.y1d-s SHGC-CLJ Gasterosteus aculeatus ... 46 0.74 1
(DT987804) CLJ233-E02.x1d-t SHGC-CLJ Gasterosteus aculeatus ... 46 0.74 1
(DN710792) CLJ91-D02.y1d-s SHGC-CLJ Gasterosteus aculeatus c... 46 0.74 1
(DN710791) CLJ91-D02.x1d-t SHGC-CLJ Gasterosteus aculeatus c... 46 0.74 1
(AU060735) Dictyostelium discoideum slug cDNA, clone SLB284. 46 0.74 1
(AM803040) Nicotiana tabacum EST, clone nt005211018. 46 0.74 1
(AJ282448) Anopheles gambiae EST 4A3A-AAY-B-01-R. 46 0.74 1
(AJ281775) Anopheles gambiae EST 4A3A-AAK-F-11-R. 46 0.74 1
(CD192977) MS1-0075U-A258-G03-U.B MS1-0075 Schistosoma manso... 46 0.74 1
(CD182898) MS1-0036T-D126-F05-U.G MS1-0036 Schistosoma manso... 46 0.74 1
(CD182815) MS1-0036T-D125-B02-U.G MS1-0036 Schistosoma manso... 46 0.74 1
(CD182736) MS1-0036T-D123-D03-U.G MS1-0036 Schistosoma manso... 46 0.74 1
(CD182729) MS1-0036T-D123-B10-U.G MS1-0036 Schistosoma manso... 46 0.74 1
(CD139935) MG1-0065T-D212-H09-U.G MG1-0065 Schistosoma manso... 46 0.74 1
(CD139019) MG1-0057T-L348-B06-U.B MG1-0057 Schistosoma manso... 46 0.74 1
(CD114060) ME1-0032P-A116-F03-U.G ME1-0032 Schistosoma manso... 46 0.74 1
(FG357414) RM_G_00090 Eriocheir sinensis hepatopancreas cDNA... 46 0.74 1
(FD716759) CAAA2408.fwd CAAA Petromyzon marinus Petromyzon m... 46 0.74 1
(EY389572) CAXA7919.fwd CAXA Helobdella robusta Subtracted L... 46 0.74 1
(EY384922) CAXA5415.rev CAXA Helobdella robusta Subtracted L... 46 0.74 1
(EY356956) CAWZ4640.fwd CAWZ Helobdella robusta Primary Late... 46 0.74 1
(EY352169) CAWZ18568.fwd CAWZ Helobdella robusta Primary Lat... 46 0.74 1
(EY346411) CAWZ15042.fwd CAWZ Helobdella robusta Primary Lat... 46 0.74 1
(EY326865) CAWY11875.rev CAWY Helobdella robusta Subtracted ... 46 0.74 1
(EY292029) CAWX10329.fwd CAWX Helobdella robusta Primary Ear... 46 0.74 1
(EX494059) NC_EG200151e05.esd.z EG2 Schistosoma mansoni cDNA... 46 0.74 1
(BJ333964) Dictyostelium discoideum cDNA clone:dda44k18, 5' ... 32 0.79 3
(AC168791) Strongylocentrotus purpuratus clone R3-13J6, WORK... 40 0.86 3
(BJ392616) Dictyostelium discoideum cDNA clone:dds28f12, 5' ... 32 0.88 3
(BJ397099) Dictyostelium discoideum cDNA clone:dds45e06, 5' ... 32 1.00 3
(AC181160) Strongylocentrotus purpuratus clone R3-3038A22, W... 40 1.2 3
(FJ423037) Salmo salar clone BAC 39E15, *** SEQUENCING IN PR... 34 1.5 2
(FJ423033) Salmo salar clone BAC 493L23, *** SEQUENCING IN P... 34 1.5 2
(AC177047) Strongylocentrotus purpuratus clone R3-38P16, WOR... 34 1.5 2
(FP312669) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 1.5 2
(AC184552) Strongylocentrotus purpuratus clone R3-8B7, WORKI... 40 1.5 2
(AC181894) Strongylocentrotus purpuratus clone R3-1016J06, W... 44 1.6 3
(CR936846) Zebrafish DNA sequence from clone DKEY-20N3 in li... 32 1.6 2
(AC201298) Strongylocentrotus purpuratus clone R3-16H4, WORK... 36 1.6 3
(AC184536) Strongylocentrotus purpuratus clone R3-4017B7, WO... 44 1.7 2
(FE427676) CAOP1824.fwd CAOP Selaginella moellendorffii mixe... 36 1.9 2
(GE419603) 294504754 Nasonia vitripennis Adult Male Nasonia ... 32 2.0 2
(GE365956) 292292730 Nasonia vitripennis Male Pupae Nasonia ... 32 2.0 2
(AC176223) Strongylocentrotus purpuratus clone R3-3062J14, W... 40 2.2 2
(FE438107) CAOP7846.rev CAOP Selaginella moellendorffii mixe... 36 2.2 2
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 44 2.2 4
(ET312139) S0139F13_SP6 CHORI-214 Salmo salar genomic clone ... 38 2.2 2
(ET364387) S0086H13_SP6 CHORI-214 Salmo salar genomic clone ... 38 2.3 2
(FE427485) CAOP1715.rev CAOP Selaginella moellendorffii mixe... 36 2.4 2
(AC181183) Strongylocentrotus purpuratus clone R3-14O6, WORK... 40 2.4 3
(FE475521) CAOS5486.rev CAOS Selaginella moellendorffii mixe... 36 2.4 2
(FN357905) Schistosoma mansoni genome sequence supercontig S... 40 2.7 3
(CU634008) Zebrafish DNA sequence from clone CH1073-382C16 i... 44 2.9 1
(CT573294) Zebrafish DNA sequence from clone DKEY-206F22 in ... 44 2.9 1
(CR931801) Zebrafish DNA sequence from clone DKEY-232F4 in l... 44 2.9 1
(CR407546) Zebrafish DNA sequence from clone CH211-276E3 in ... 44 2.9 1
(CR381647) Zebrafish DNA sequence from clone CH211-248G18 in... 44 2.9 1
(CR376733) Zebrafish DNA sequence from clone DKEY-189O24 in ... 44 2.9 1
(CR361549) Zebrafish DNA sequence from clone CH211-241I6 in ... 44 2.9 1
(BX530066) Zebrafish DNA sequence from clone DKEY-48C13 in l... 44 2.9 1
(BX322617) Zebrafish DNA sequence from clone DKEY-33D4. 44 2.9 1
(BX072535) Zebrafish DNA sequence from clone CH211-128E5. 44 2.9 1
(BX005453) Zebrafish DNA sequence from clone CH211-160E19 in... 44 2.9 1
(AB072914) Expression vector pMFXU4 DNA, complete sequence. 44 2.9 1
(BV218229) S233P6147FD4.T0 LabradorRetriever Canis familiari... 44 2.9 1
(AL845160) Mouse DNA sequence from clone RP23-303O15 on chro... 44 2.9 1
(AC154832) Mus musculus BAC clone RP24-568D4 from chromosome... 44 2.9 1
(AC149068) Mus musculus BAC clone RP23-7G19 from 18, complet... 44 2.9 1
(AC135409) Rattus norvegicus 8 BAC CH230-416D7 (Children's H... 44 2.9 1
(AC134536) Mus musculus BAC clone RP24-386B19 from 7, comple... 44 2.9 1
(AC131975) Mus musculus chromosome 17, clone RP24-146B4, com... 44 2.9 1
(AC122180) Mus musculus chromosome 7, clone RP24-296E5, comp... 44 2.9 1
(AC119655) Rattus norvegicus BAC CH230-259N5 (Children's Ho... 44 2.9 1
(AM989984) Zygosaccharomyces rouxii strain CBS 732 Contig5. 44 2.9 1
(AM454160) Vitis vinifera contig VV78X004189.11, whole genom... 44 2.9 1
(AB035095) Candida boidinii FDH1 gene, promoter region. 44 2.9 1
(E22865) DNA sequence increasing promoter activity. 44 2.9 1
(DL105339) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL105338) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL093407) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL093406) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL028704) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL028703) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL016772) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(DL016771) Diagnosis of existing illnesses or that praedispo... 44 2.9 1
(BD460344) Diagnosis of Diseases Associated with Cell Cycle. 44 2.9 1
(BD452266) Diagnosis of Diseases Associated with Cell Cycle. 44 2.9 1
(AX345734) Sequence 805 from Patent WO0200928. 44 2.9 1
(AX251880) Sequence 141 from Patent WO0168911. 44 2.9 1
(GM641168) Sequence 19690 from Patent EP1942197. 44 2.9 1
(GM641167) Sequence 19689 from Patent EP1942197. 44 2.9 1
(GM629236) Sequence 7758 from Patent EP1942197. 44 2.9 1
(GM629235) Sequence 7757 from Patent EP1942197. 44 2.9 1
(AR164926) Sequence 2 from patent US 6274340. 44 2.9 1
(AR093946) Sequence 50 from patent US 6001590. 44 2.9 1
(AR093945) Sequence 49 from patent US 6001590. 44 2.9 1
(AR093915) Sequence 19 from patent US 6001590. 44 2.9 1
(AR093911) Sequence 1 from patent US 6001590. 44 2.9 1
(AC151756) Ornithorhynchus anatinus chromosome UNK clone OAB... 44 2.9 1
(M16230) Strongylocentrotus purpuratus spicule matrix protei... 44 2.9 1
(FN373912) Schistosoma mansoni genome sequence supercontig S... 44 2.9 1
(FN366421) Schistosoma mansoni genome sequence supercontig S... 44 2.9 1
(FN357875) Schistosoma mansoni genome sequence supercontig S... 44 2.9 1
(AC171128) Helobdella robusta clone CH306-1A10, complete seq... 44 2.9 1
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 44 2.9 1
(AL445669) Human DNA sequence from clone RP11-163G10 on chro... 44 2.9 1
(AC023078) Homo sapiens chromosome 11, clone RP11-583F24, co... 44 2.9 1
(AC160379) Bos taurus clone CH240-91C14, WORKING DRAFT SEQUE... 44 2.9 1
(AC157968) Strongylocentrotus purpuratus clone R3-4002N23, W... 44 2.9 1
(AC149937) Strongylocentrotus purpuratus clone R3-12N21, WOR... 44 2.9 1
(AC149929) Strongylocentrotus purpuratus clone R3-12L22, WOR... 44 2.9 1
(AC142476) Rattus norvegicus clone CH230-70H24, WORKING DRAF... 44 2.9 1
(AC141766) Apis mellifera clone CH224-60D6, WORKING DRAFT SE... 44 2.9 1
(AC139482) Homo sapiens chromosome 5 clone RP11-583F24, WORK... 44 2.9 1
(AC137335) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 2.9 1
(AC135767) Rattus norvegicus clone CH230-79K20, *** SEQUENCI... 44 2.9 1
(AC134726) Rattus norvegicus clone CH230-452A17, *** SEQUENC... 44 2.9 1
(AC134637) Rattus norvegicus clone CH230-460L1, *** SEQUENCI... 44 2.9 1
(AC133987) Rattus norvegicus clone CH230-2F5, WORKING DRAFT ... 44 2.9 1
(AC132496) Rattus norvegicus clone CH230-374P21, *** SEQUENC... 44 2.9 1
(AC130015) Rattus norvegicus clone CH230-12K23, *** SEQUENCI... 44 2.9 1
(AC129743) Rattus norvegicus clone CH230-31G7, WORKING DRAFT... 44 2.9 1
(AC129705) Rattus norvegicus clone CH230-8J12, WORKING DRAFT... 44 2.9 1
(AC129051) Rattus norvegicus clone CH230-89P7, *** SEQUENCIN... 44 2.9 1
(AC126649) Rattus norvegicus clone CH230-134G15, WORKING DRA... 44 2.9 1
(AC123140) Rattus norvegicus clone CH230-189F23, *** SEQUENC... 44 2.9 1
(AC123101) Rattus norvegicus clone CH230-32O20, *** SEQUENCI... 44 2.9 1
(AC120842) Mus musculus clone RP23-365N19, WORKING DRAFT SEQ... 44 2.9 1
(AC119353) Rattus norvegicus clone CH230-413H6, *** SEQUENCI... 44 2.9 1
(AC117974) Rattus norvegicus clone CH230-423J24, *** SEQUENC... 44 2.9 1
(AC117305) Rattus norvegicus clone CH230-207C20, *** SEQUENC... 44 2.9 1
(AC116056) Rattus norvegicus clone CH230-174F7, *** SEQUENCI... 44 2.9 1
(AC115146) Rattus norvegicus clone CH230-278L16, WORKING DRA... 44 2.9 1
(AC114251) Rattus norvegicus clone CH230-343K20, WORKING DRA... 44 2.9 1
(AC114103) Rattus norvegicus clone CH230-18K5, *** SEQUENCIN... 44 2.9 1
(AC109969) Rattus norvegicus clone CH230-332B7, *** SEQUENCI... 44 2.9 1
(AC108980) Rattus norvegicus clone CH230-168E13, *** SEQUENC... 44 2.9 1
(AC107476) Rattus norvegicus clone CH230-222M4, WORKING DRAF... 44 2.9 1
(AC106513) Rattus norvegicus clone CH230-201M14, WORKING DRA... 44 2.9 1
(AC102962) Rattus norvegicus clone CH230-170B17, *** SEQUENC... 44 2.9 1
(AC099153) Rattus norvegicus clone CH230-66I18, *** SEQUENCI... 44 2.9 1
(AC098042) Rattus norvegicus clone CH230-60N19, WORKING DRAF... 44 2.9 1
(AC097207) Rattus norvegicus clone CH230-42K23, *** SEQUENCI... 44 2.9 1
(AC097095) Rattus norvegicus clone CH230-208L9, WORKING DRAF... 44 2.9 1
(AC095714) Rattus norvegicus clone CH230-5M16, WORKING DRAFT... 44 2.9 1
(FP340261) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.9 1
(FP236738) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.9 1
(FP102921) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.9 1
(FP102773) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.9 1
(FP016013) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.9 1
(CU929553) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.9 1
(CU914621) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.9 1
(CU694753) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 2.9 1
(AC094468) Rattus norvegicus clone CH230-4A9, WORKING DRAFT ... 44 2.9 1
(AC093984) Rattus norvegicus clone CH230-18C8, WORKING DRAFT... 44 2.9 1
(CR940353) Theileria annulata genomic DNA chromosome 4. 44 2.9 1
(AL355801) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 2.9 1
(AC222273) Bos taurus clone CH240-413N10, WORKING DRAFT SEQU... 44 2.9 1
(AC201614) Strongylocentrotus purpuratus clone R3-63M22, WOR... 44 2.9 1
(AC201481) Strongylocentrotus purpuratus clone R3-3056F05, W... 44 2.9 1
(AC201467) Strongylocentrotus purpuratus clone R3-3045M7, WO... 44 2.9 1
(AC201151) Strongylocentrotus purpuratus clone R3-14E9, WORK... 44 2.9 1
(AC201111) Strongylocentrotus purpuratus clone R3-13K3, WORK... 44 2.9 1
(AC194232) Zea mays chromosome unknown clone CH201-8J13; ZMM... 44 2.9 1
(AC184660) Strongylocentrotus purpuratus clone R3-1103E18, W... 44 2.9 1
(AC184528) Strongylocentrotus purpuratus clone R3-3110F15, W... 44 2.9 1
(AC184425) Strongylocentrotus purpuratus clone R3-3077M13, W... 44 2.9 1
(AC184341) Strongylocentrotus purpuratus clone R3-3072I14, W... 44 2.9 1
(AC184331) Strongylocentrotus purpuratus clone R3-3037M7, WO... 44 2.9 1
(AC181749) Strongylocentrotus purpuratus clone R3-1036P18, W... 44 2.9 1
(AC181700) Strongylocentrotus purpuratus clone R3-3102I11, W... 44 2.9 1
(AC181661) Strongylocentrotus purpuratus clone R3-10E9, WORK... 44 2.9 1
(AC181622) Strongylocentrotus purpuratus clone R3-1105L13, W... 44 2.9 1
(AC181344) Strongylocentrotus purpuratus clone R3-115C15, WO... 44 2.9 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 44 2.9 1
(AC180837) Strongylocentrotus purpuratus clone R3-3069N16, W... 44 2.9 1
(AC180655) Strongylocentrotus purpuratus clone R3-3019L21, W... 44 2.9 1
(AC180480) Strongylocentrotus purpuratus clone R3-3100M17, W... 44 2.9 1
(AC180437) Strongylocentrotus purpuratus clone R3-3009O14, W... 44 2.9 1
(AC180417) Strongylocentrotus purpuratus clone R3-3105C06, W... 44 2.9 1
(AC180096) Strongylocentrotus purpuratus clone R3-4007O21, W... 44 2.9 1
(AC179950) Strongylocentrotus purpuratus clone R3-3033I20, W... 44 2.9 1
(AC179811) Strongylocentrotus purpuratus clone R3-1013K2, WO... 44 2.9 1
(AC179797) Strongylocentrotus purpuratus clone R3-1014I12, W... 44 2.9 1
(AC179789) Strongylocentrotus purpuratus clone R3-1014P24, W... 44 2.9 1
(AC179606) Strongylocentrotus purpuratus clone R3-1028P05, W... 44 2.9 1
(AC179546) Strongylocentrotus purpuratus clone R3-6M2, WORKI... 44 2.9 1
(AC179283) Strongylocentrotus purpuratus clone R3-1105H23, W... 44 2.9 1
(AC179252) Strongylocentrotus purpuratus clone R3-42L7, WORK... 44 2.9 1
(AC179169) Strongylocentrotus purpuratus clone R3-4016G2, WO... 44 2.9 1
(AC178815) Strongylocentrotus purpuratus clone R3-29I4, WORK... 44 2.9 1
(AC178476) Strongylocentrotus purpuratus clone R3-3039C18, W... 44 2.9 1
(AC178223) Strongylocentrotus purpuratus clone R3-3085M04, W... 44 2.9 1
(AC178135) Strongylocentrotus purpuratus clone R3-3078G13, W... 44 2.9 1
(AC178124) Strongylocentrotus purpuratus clone R3-3074P13, W... 44 2.9 1
(AC178048) Strongylocentrotus purpuratus clone R3-1117F11, W... 44 2.9 1
(AC177233) Strongylocentrotus purpuratus clone R3-1034H06, W... 44 2.9 1
(AC177118) Strongylocentrotus purpuratus clone R3-4014D4, WO... 44 2.9 1
(AC176814) Strongylocentrotus purpuratus clone R3-3111B06, W... 44 2.9 1
(AC176801) Strongylocentrotus purpuratus clone R3-1110K24, W... 44 2.9 1
(AC176337) Strongylocentrotus purpuratus clone R3-3053N1, WO... 44 2.9 1
(AC172488) Strongylocentrotus purpuratus clone R3-14F15, WOR... 44 2.9 1
(AC168792) Strongylocentrotus purpuratus clone R3-13J7, WORK... 44 2.9 1
(AC168790) Strongylocentrotus purpuratus clone R3-13K10, WOR... 44 2.9 1
(AC168706) Strongylocentrotus purpuratus clone R3-3011L19, W... 44 2.9 1
(AC168510) Strongylocentrotus purpuratus clone R3-3108N12, W... 44 2.9 1
(AC168391) Strongylocentrotus purpuratus clone R3-4002N23, W... 44 2.9 1
(AC165492) Bos taurus clone CH240-172E10, WORKING DRAFT SEQU... 44 2.9 1
(AZ976604) 2M0252O02F Mouse 10kb plasmid UUGC2M library Mus ... 44 2.9 1
(AZ698265) RPCI-23-224G5.TV RPCI-23 Mus musculus genomic clo... 44 2.9 1
(FH558665) CHO_OF4477xh09r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 2.9 1
(ET969068) CHO_OF640xn10r1.ab1 CHO_OF Nicotiana tabacum geno... 44 2.9 1
(ET818841) CHO_OF729xp14r1.ab1 CHO_OF Nicotiana tabacum geno... 44 2.9 1
(ER121564) 1095522041568 Global-Ocean-Sampling_GS-33-01-01-1... 44 2.9 1
(EK748706) 1093017013044 Global-Ocean-Sampling_GS-33-01-01-1... 44 2.9 1
(EJ763302) 1092963155815 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.9 1
(EJ184170) 1092344142749 Global-Ocean-Sampling_GS-27-01-01-1... 44 2.9 1
(DH723805) Rattus norvegicus DNA, BAC clone: RNB1-292B03, 3'... 44 2.9 1
(DH619379) Rattus norvegicus DNA, BAC clone: RNB1-151K03, 3'... 44 2.9 1
(DH507579) Monosiga ovata DNA, fosmid clone: MOF-080A10, gen... 44 2.9 1
(DH492582) Monosiga ovata DNA, fosmid clone: MOF-054E01, gen... 44 2.9 1
(DH482273) Monosiga ovata DNA, fosmid clone: MOF-036H15, gen... 44 2.9 1
(DH472535) Monosiga ovata DNA, fosmid clone: MOF-019H04, gen... 44 2.9 1
(DE980261) Macropus eugenii DNA, BAC clone: MEB1-188L15_F, 5... 44 2.9 1
(CL606724) CH240_160C11.TJ CHORI-240 Bos taurus genomic clon... 44 2.9 1
(CE158227) tigr-gss-dog-17000371399044 Dog Library Canis lup... 44 2.9 1
(B93200) CIT-HSP-2166K18.TR CIT-HSP Homo sapiens genomic clo... 44 2.9 1
(BZ153649) CH230-395P2.TV CHORI-230 Segment 2 Rattus norvegi... 44 2.9 1
(BX219628) Danio rerio genomic clone DKEY-273D9, genomic sur... 44 2.9 1
(AG072369) Pan troglodytes DNA, clone: PTB-063N13.F. 44 2.9 1
(EL758431) AD0105050 Taenia solium UNAM-cd1_adult Taenia sol... 44 2.9 1
(EL758269) AD0103013 Taenia solium UNAM-cd1_adult Taenia sol... 44 2.9 1
(EL757990) AD0099002 Taenia solium UNAM-cd1_adult Taenia sol... 44 2.9 1
(EG629938) EMBRYOF088217M13 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 44 2.9 1
(EG618660) REPROTRACTF101157M17 POSSUM_01-POSSUM-C-REPROTRAC... 44 2.9 1
(EG600826) EMBRYOF101114P12 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr... 44 2.9 1
(EE605463) BI_362 Diapausing queen of the bumblebee, Bombus ... 44 2.9 1
(EC287738) BRAINF089528D6 POSSUM_01-POSSUM-C-BRAIN-2KB Trich... 44 2.9 1
(CV673797) RET7SJ_22H12.T7 Schistosoma japonicum reverse cDN... 44 2.9 1
(BX610991) Anopheles gambiae EST, clone AGAA139TR. 44 2.9 1
(BU770272) SJECUB12 SJE Schistosoma japonicum cDNA, mRNA seq... 44 2.9 1
(BM632429) 17000687504269 A.Gam.ad.cDNA1 Anopheles gambiae c... 44 2.9 1
(BM631242) 17000687502538 A.Gam.ad.cDNA1 Anopheles gambiae c... 44 2.9 1
(BM622647) 17000659338513 A.Gam.ad.cDNA1 Anopheles gambiae c... 44 2.9 1
(BM617479) 17000687157468 A.Gam.ad.cDNA.blood1 Anopheles gam... 44 2.9 1
(BJ442251) Dictyostelium discoideum cDNA clone:ddv49f08, 3' ... 44 2.9 1
(BJ436804) Dictyostelium discoideum cDNA clone:ddv32d11, 3' ... 44 2.9 1
(BJ386439) Dictyostelium discoideum cDNA clone:ddc58b09, 3' ... 44 2.9 1
(BJ385415) Dictyostelium discoideum cDNA clone:ddc54j20, 3' ... 44 2.9 1
(BJ382069) Dictyostelium discoideum cDNA clone:ddc43e21, 3' ... 44 2.9 1
(BJ380927) Dictyostelium discoideum cDNA clone:ddc39c21, 3' ... 44 2.9 1
(BJ380588) Dictyostelium discoideum cDNA clone:ddc38m13, 3' ... 44 2.9 1
(BJ380461) Dictyostelium discoideum cDNA clone:ddc38a10, 3' ... 44 2.9 1
(BJ378992) Dictyostelium discoideum cDNA clone:ddc33o12, 3' ... 44 2.9 1
(BJ373948) Dictyostelium discoideum cDNA clone:ddc5e17, 3' e... 44 2.9 1
(BJ372362) Dictyostelium discoideum cDNA clone:ddc12e09, 3' ... 44 2.9 1
(BF422994) Hc_d11_20G03_SKPL Haemonchus contortus d11 mixed ... 44 2.9 1
(GE521528) CCFU553.b1_B19.ab1 CCF(STU) sunflower Helianthus ... 44 2.9 1
(FM978920) Glossina morsitans morsitans EST, clone GMsg171f0... 44 2.9 1
(FE746155) CAYC3492.b1 CAYC Petrolisthes cinctipes heart, ne... 44 2.9 1
(FE583622) CAXG15624.rev Amphioxus Branchiostoma floridae un... 44 2.9 1
(FC562395) CAWF4388.rev CAWF Lottia gigantea from mantle (H)... 44 2.9 1
(EY347585) CAWZ15697.rev CAWZ Helobdella robusta Primary Lat... 44 2.9 1
(EY332229) CAWY4726.rev CAWY Helobdella robusta Subtracted E... 44 2.9 1
(EX551357) AIAE-aab21h06.g1 Ancylostoma_caninum_EST_Female_p... 44 2.9 1
(AB246700) Uncultured crenarchaeote 31-F-01 DNA, partial gen... 44 2.9 1
(EC439106) 165391458 Sea Urchin Radial Nerve cDNA Library St... 40 3.2 2
(AC180804) Strongylocentrotus purpuratus clone R3-3071H05, W... 38 3.2 5
(AC178848) Strongylocentrotus purpuratus clone R3-29A23, WOR... 38 3.5 3
(AC105329) Rattus norvegicus clone CH230-136F16, *** SEQUENC... 40 3.7 3
(CU694532) Zebrafish DNA sequence from clone CH73-376G11 in ... 40 4.0 2
(AC180129) Strongylocentrotus purpuratus clone R3-4007B13, W... 40 4.5 3
(BX664701) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 42 4.7 2
(AX346043) Sequence 1114 from Patent WO0200928. 40 4.8 2
(AC177655) Strongylocentrotus purpuratus clone R3-1018A08, W... 40 4.9 2
(AC184382) Strongylocentrotus purpuratus clone R3-1033D1, WO... 40 5.4 2
(AC141543) Rattus norvegicus clone CH230-493H4, WORKING DRAF... 42 5.7 2
(CU633611) Zebrafish DNA sequence from clone CH211-128J1 in ... 30 5.8 2
(AC179647) Strongylocentrotus purpuratus clone R3-1024K12, W... 40 5.9 3
(AC176453) Strongylocentrotus purpuratus clone R3-114O03, WO... 42 5.9 2
(AC177276) Strongylocentrotus purpuratus clone R3-44D23, WOR... 40 6.0 2
(AC179363) Strongylocentrotus purpuratus clone R3-1102B2, WO... 40 6.0 2
(AC174251) Strongylocentrotus purpuratus clone R3-3059M9, WO... 40 6.0 2
(AC180041) Strongylocentrotus purpuratus clone R3-24A22, WOR... 40 6.1 2
(AC177117) Strongylocentrotus purpuratus clone R3-4014D20, W... 40 6.3 3
(AC168480) Strongylocentrotus purpuratus clone R3-3117N3, WO... 40 6.4 2
(AC120826) Rattus norvegicus clone CH230-495G14, *** SEQUENC... 36 6.4 2
(AC149470) Rhinolophus ferrumequinum clone VMRC7-216G17, WOR... 42 6.5 2
(AC179955) Strongylocentrotus purpuratus clone R3-20O19, WOR... 40 6.7 2
(AC130209) Mus musculus BAC clone RP24-369J19 from chromosom... 40 6.9 3
(AC176741) Strongylocentrotus purpuratus clone R3-3097B19, W... 38 7.1 2
(ER100365) 1095521895052 Global-Ocean-Sampling_GS-33-01-01-1... 30 7.5 2
(AC079175) Homo sapiens Xp BAC RP11-122N14 (Roswell Park Can... 42 7.5 3
(AC184211) Strongylocentrotus purpuratus clone R3-28G1, WORK... 40 7.7 3

>(AU073507) Dictyostelium discoideum slug cDNA, clone SSH404.
Length = 240

Score = 232 bits (117), Expect(2) = 2e-80
Identities = 117/117 (100%)
Strand = Plus / Plus


Query: 1 agagaattaaaaaagcactaagcgatttagataatgctacagtattaaatcaattaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagaattaaaaaagcactaagcgatttagataatgctacagtattaaatcaattaccaa 60


Query: 61 ttttaagtaatgatttaacaactacttgtggtagtagtagcggtagtagtagtaatg 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttaagtaatgatttaacaactacttgtggtagtagtagcggtagtagtagtaatg 117

Score = 101 bits (51), Expect(2) = 2e-80
Identities = 51/51 (100%)
Strand = Plus / Plus


Query: 190 gcacatccaattctacaacatcaccatcactattaattacaagttatagac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gcacatccaattctacaacatcaccatcactattaattacaagttatagac 240

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 249,354,774
Number of extensions: 14847593
Number of successful extensions: 1438771
Number of sequences better than 10.0: 510
Length of query: 295
Length of database: 104,622,809,269
Length adjustment: 23
Effective length of query: 272
Effective length of database: 102,190,702,835
Effective search space: 27795871171120
Effective search space used: 27795871171120
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 8. 1
Homology vs Protein
Query= Contig-U05351-1 (Contig-U05351-1Q) /CSM_Contig/Contig-U05351-1Q.Seq.d
(295 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 238,260,436
Number of extensions: 2352568
Number of successful extensions: 3814
Number of sequences better than 10.0: 0
Number of HSP's gapped: 3814
Number of HSP's successfully gapped: 0
Length of query: 98
Length of database: 1,061,185,681
Length adjustment: 67
Effective length of query: 31
Effective length of database: 842,199,665
Effective search space: 26108189615
Effective search space used: 26108189615
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)

PSORT

psg: 0.81 gvh: 0.62 alm: 0.50 top: 0.53 tms: 0.00 mit: 0.29 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
32.0 %: nuclear
12.0 %: cytoskeletal
12.0 %: mitochondrial
4.0 %: Golgi
4.0 %: vacuolar

>> prediction for Contig-U05351-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0