>Contig-U05290-1 (Contig-U05290-1Q) /CSM_Contig/Contig-U05290-1Q.Seq.d
TTTTTTTTTAAAATTTAATTTTANTTAANTTTATTTTGANAATTANAATT
AAGNTTAAAAATGAATNTAAGATTAATTATTTTTTTTTAAANTTCTTAAN
TTTTTTTTTTTTCTTCTTTTTTTCTTTTGTTCATTTATTTATTAAATAAT
TTAAGTTGAACCAAAAACATATTCACTAACTTTTGAAAAGAATGATGGTC
TTGAGGGTGTTCCTAATGCATTATTATTTGAAAATGATTGTGGGTCATAA
TCTGATCTTGCTGGATGATATTTCTTTTCAATTGTTTTCAAAGAGTGATC
ACCAAGTTGTGATGGTTGTGCTTTAATTGGATCTGATTCATTTCTAATTT
TTTCTTTACAAGGTACAATACCAATCATACAATTTCCTAAAATTAAACCA
TTCTTTTTTAATAAATCGATTGAAGAATGGTTTAATTTTAGGAAATTGTA
TGATTGGTATTGTACCTTGTAAAGAAAAAATTAGAAATGAATCAGATCCA
ATTAAAGCACAACCATCACAACTTGGTGATCACTCTTTGAAAACAATTGA
AAAGAAATATCATCCAGCAAGATCAGATTATGACCCACAATCATTTTCAA
ATAATAATGCATTAGGAACACCCTCAAGACCATCATTCTTTTCAAAAGTT
AGTGAATATGTTTTTGGTTCAACTTAAATTATTTAATAAATAAATGAACA
AAAGAAA

est1=VSG616F,1,484
est2=SSG790E,367,709

ff*nlilxxfilxixikxknexkinyfflxflxfffffffsfvhlfik*fklnqkhih*l
lkrmmvlrvflmhyylkmivghnlillddisfqlfsksdhqvvmvvl*ldlihf*FFLYK
VQYQSYNFLKLNHSFLINRLKNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHSLK
TIEKKYHPARSDYDPQSFSNNNALGTPSRPSFFSKVSEYVFGST*ii**ineqkk

Frame A:
fffki*fxlxlf*xlxlxlkmnxrliiff*xs*xfffssffllfiyllnnls*tkniftn
f*ke*ws*gcs*ciii*k*lwvii*scwmiflfncfqrvitkl*wlcfnwi*fisnffft
ryntnhtis*n*tilf**id*rmv*f*eiv*lvlylvkkklemnqiqlkhnhhnlvitl*
kqlkrniiqqdqimthnhfqiimh*ehpqdhhsfqklvnmflvqlklfnk*mnkr


Frame B:
fflkfnfx*xyfxnxn*x*k*x*d*lfffkxlxffffllfffcsfiy*ii*vepktyslt
fekndglegvpnallfendcgs*sdlag*yffsivfke*spscdgcaligsdsflifslq
gtipiiqfpkikpfffnksieewfnfrklydwyctl*rkn*k*irsn*sttittw*slfe
nn*keissskirl*ptiifk**cirntlktiilfks**icfwfnlnylink*tke


Frame C:
ff*nlilxxfilxixikxknexkinyfflxflxfffffffsfvhlfik*fklnqkhih*l
lkrmmvlrvflmhyylkmivghnlillddisfqlfsksdhqvvmvvl*ldlihf*FFLYK
VQYQSYNFLKLNHSFLINRLKNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHSLK
TIEKKYHPARSDYDPQSFSNNNALGTPSRPSFFSKVSEYVFGST*ii**ineqkk

Query= Contig-U05290-1 (Contig-U05290-1Q)
/CSM_Contig/Contig-U05290-1Q.Seq.d
         (707 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U05290-1 (Contig-U05290-1Q) /CSM_Contig/Conti...  1148  0.0
Contig-U13968-1 (Contig-U13968-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U13048-1 (Contig-U13048-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U09715-1 (Contig-U09715-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U11808-1 (Contig-U11808-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U10675-1 (Contig-U10675-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U05497-1 (Contig-U05497-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U05003-1 (Contig-U05003-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U03199-1 (Contig-U03199-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U14334-1 (Contig-U14334-1Q) /CSM_Contig/Conti...    34  0.20

>Contig-U05290-1 (Contig-U05290-1Q) /CSM_Contig/Contig-U05290-1Q.Seq.d
          Length = 707

 Score = 1148 bits (579), Expect = 0.0
 Identities = 579/579 (100%)
 Strand = Plus / Plus

                                                                       
Query: 129 gttcatttatttattaaataatttaagttgaaccaaaaacatattcactaacttttgaaa 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gttcatttatttattaaataatttaagttgaaccaaaaacatattcactaacttttgaaa 188

                                                                       
Query: 189 agaatgatggtcttgagggtgttcctaatgcattattatttgaaaatgattgtgggtcat 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agaatgatggtcttgagggtgttcctaatgcattattatttgaaaatgattgtgggtcat 248

                                                                       
Query: 249 aatctgatcttgctggatgatatttcttttcaattgttttcaaagagtgatcaccaagtt 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aatctgatcttgctggatgatatttcttttcaattgttttcaaagagtgatcaccaagtt 308

                                                                       
Query: 309 gtgatggttgtgctttaattggatctgattcatttctaattttttctttacaaggtacaa 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gtgatggttgtgctttaattggatctgattcatttctaattttttctttacaaggtacaa 368

                                                                       
Query: 369 taccaatcatacaatttcctaaaattaaaccattcttttttaataaatcgattgaagaat 428
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 taccaatcatacaatttcctaaaattaaaccattcttttttaataaatcgattgaagaat 428

                                                                       
Query: 429 ggtttaattttaggaaattgtatgattggtattgtaccttgtaaagaaaaaattagaaat 488
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ggtttaattttaggaaattgtatgattggtattgtaccttgtaaagaaaaaattagaaat 488

                                                                       
Query: 489 gaatcagatccaattaaagcacaaccatcacaacttggtgatcactctttgaaaacaatt 548
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gaatcagatccaattaaagcacaaccatcacaacttggtgatcactctttgaaaacaatt 548

                                                                       
Query: 549 gaaaagaaatatcatccagcaagatcagattatgacccacaatcattttcaaataataat 608
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gaaaagaaatatcatccagcaagatcagattatgacccacaatcattttcaaataataat 608

                                                                       
Query: 609 gcattaggaacaccctcaagaccatcattcttttcaaaagttagtgaatatgtttttggt 668
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcattaggaacaccctcaagaccatcattcttttcaaaagttagtgaatatgtttttggt 668

                                                  
Query: 669 tcaacttaaattatttaataaataaatgaacaaaagaaa 707
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tcaacttaaattatttaataaataaatgaacaaaagaaa 707


 Score =  565 bits (285), Expect = e-161
 Identities = 285/285 (100%)
 Strand = Plus / Minus

                                                                       
Query: 423 aagaatggtttaattttaggaaattgtatgattggtattgtaccttgtaaagaaaaaatt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aagaatggtttaattttaggaaattgtatgattggtattgtaccttgtaaagaaaaaatt 346

                                                                       
Query: 483 agaaatgaatcagatccaattaaagcacaaccatcacaacttggtgatcactctttgaaa 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 agaaatgaatcagatccaattaaagcacaaccatcacaacttggtgatcactctttgaaa 286

                                                                       
Query: 543 acaattgaaaagaaatatcatccagcaagatcagattatgacccacaatcattttcaaat 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acaattgaaaagaaatatcatccagcaagatcagattatgacccacaatcattttcaaat 226

                                                                       
Query: 603 aataatgcattaggaacaccctcaagaccatcattcttttcaaaagttagtgaatatgtt 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aataatgcattaggaacaccctcaagaccatcattcttttcaaaagttagtgaatatgtt 166

                                                        
Query: 663 tttggttcaacttaaattatttaataaataaatgaacaaaagaaa 707
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tttggttcaacttaaattatttaataaataaatgaacaaaagaaa 121


 Score =  549 bits (277), Expect = e-156
 Identities = 277/277 (100%)
 Strand = Plus / Minus

                                                                       
Query: 129 gttcatttatttattaaataatttaagttgaaccaaaaacatattcactaacttttgaaa 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gttcatttatttattaaataatttaagttgaaccaaaaacatattcactaacttttgaaa 640

                                                                       
Query: 189 agaatgatggtcttgagggtgttcctaatgcattattatttgaaaatgattgtgggtcat 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agaatgatggtcttgagggtgttcctaatgcattattatttgaaaatgattgtgggtcat 580

                                                                       
Query: 249 aatctgatcttgctggatgatatttcttttcaattgttttcaaagagtgatcaccaagtt 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aatctgatcttgctggatgatatttcttttcaattgttttcaaagagtgatcaccaagtt 520

                                                                       
Query: 309 gtgatggttgtgctttaattggatctgattcatttctaattttttctttacaaggtacaa 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gtgatggttgtgctttaattggatctgattcatttctaattttttctttacaaggtacaa 460

                                                
Query: 369 taccaatcatacaatttcctaaaattaaaccattctt 405
           |||||||||||||||||||||||||||||||||||||
Sbjct: 459 taccaatcatacaatttcctaaaattaaaccattctt 423


 Score = 30.2 bits (15), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 62 tgaatntaagattaatta 79
          ||||||||||||||||||
Sbjct: 62 tgaatntaagattaatta 79


>Contig-U13968-1 (Contig-U13968-1Q) /CSM_Contig/Contig-U13968-1Q.Seq.d
          Length = 1749

 Score = 38.2 bits (19), Expect = 0.013
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 134  tttatttattaaataattt 152
            |||||||||||||||||||
Sbjct: 1724 tttatttattaaataattt 1706


 Score = 38.2 bits (19), Expect = 0.013
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 676  aaattatttaataaataaa 694
            |||||||||||||||||||
Sbjct: 1706 aaattatttaataaataaa 1724


>Contig-U13048-1 (Contig-U13048-1Q) /CSM_Contig/Contig-U13048-1Q.Seq.d
          Length = 592

 Score = 38.2 bits (19), Expect = 0.013
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 265 atgatatttcttttcaatt 283
           |||||||||||||||||||
Sbjct: 189 atgatatttcttttcaatt 171


 Score = 38.2 bits (19), Expect = 0.013
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 545 aattgaaaagaaatatcat 563
           |||||||||||||||||||
Sbjct: 171 aattgaaaagaaatatcat 189


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,450
Number of Sequences: 6905
Number of extensions: 20450
Number of successful extensions: 2493
Number of sequences better than 10.0: 173
length of query: 707
length of database: 5,674,871
effective HSP length: 16
effective length of query: 691
effective length of database: 5,564,391
effective search space: 3844994181
effective search space used: 3844994181
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U05290-1 (Contig-U05290-1Q) /CSM_Contig/Contig-U05290-1Q.Seq.d
         (707 letters)

Database: ddbj_B
           105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C84852) Dictyostelium discoideum slug cDNA, clone SSG790.        660   0.0    1
(AU266662) Dictyostelium discoideum vegetative cDNA clone:VS...   595   e-166  2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...   446   e-151  9
(AU073362) Dictyostelium discoideum slug cDNA, clone SSG790.      440   e-119  1
(CL555638) OB__Ba0006E12.r OB__Ba Oryza brachyantha genomic ...    42   3e-04  2
(CL550910) OB__Ba0091A10.f OB__Ba Oryza brachyantha genomic ...    40   0.001  2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    32   0.002  16
(AL844503) Plasmodium falciparum 3D7 chromosome 4.                 38   0.003  13
(AL844505) Plasmodium falciparum 3D7 chromosome 6.                 36   0.006  12
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete...    36   0.010  12
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    42   0.013  15
(CG721744) 1119068G10.x1 1119 - RescueMu Grid AA Zea mays ge...    34   0.017  3
(AF269226) Cloning vector pTIKL, complete sequence.                40   0.018  3
(AF269225) Cloning vector pLITTLE, complete sequence.              40   0.018  3
(CG721514) 1119067F03.x1 1119 - RescueMu Grid AA Zea mays ge...    40   0.018  2
(AF269238) Cloning vector pTX-FLAG, complete sequence.             40   0.019  3
(AF269237) Cloning vector pTX-GFP, complete sequence.              40   0.021  3
(AF270470) Cloning vector pBIG, complete sequence.                 40   0.022  3
(CX585641) TTE00034892 Amplicon Express - Conjugative Form T...    36   0.028  3
(CL561134) OB__Ba0019G17.f OB__Ba Oryza brachyantha genomic ...    40   0.058  2
(FJ478173) Cephus cinctus mitochondrion, complete genome.          36   0.073  5
(AP010434) Lotus japonicus genomic DNA, chromosome 5, clone:...    36   0.077  7
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    36   0.096  6
(CU074307) S.lycopersicum DNA sequence from clone LE_HBa-203...    38   0.12   7
(AL772263) Zebrafish DNA sequence from clone CH211-160D11 in...    50   0.12   1
(CT030735) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    50   0.12   1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    34   0.12   11
(AC162657) Bos taurus clone CH240-121I19, WORKING DRAFT SEQU...    42   0.14   5
(AC156223) Bos taurus clone CH240-49B24, WORKING DRAFT SEQUE...    38   0.14   6
(EU908847) Expression vector pDM360, complete sequence.            38   0.15   3
(EU908845) Expression vector pDM310, complete sequence.            38   0.17   3
(EU908848) Expression vector pDM309, complete sequence.            38   0.17   3
(EU908846) Expression vector pDM359, complete sequence.            38   0.17   3
(CG723690) 1119077F05.x1 1119 - RescueMu Grid AA Zea mays ge...    38   0.18   2
(CG721742) 1119068G09.x1 1119 - RescueMu Grid AA Zea mays ge...    38   0.18   2
(CG804135) 1118048A06.x1 1118 - RescueMu Grid S Zea mays gen...    38   0.19   2
(AC196748) Citrus sinensis clone CSRBBa-013G11, WORKING DRAF...    36   0.22   7
(AC190870) Zea mays chromosome 2 clone ZMMBBb-105H18; ZMMBBb...    42   0.22   2
(CG727121) 1119093C08.y1 1119 - RescueMu Grid AA Zea mays ge...    38   0.23   2
(BX649390) Zebrafish DNA sequence from clone DKEY-261L2 in l...    36   0.28   7
(FI725612) BOT01-64N12TR BOT01 Brassica oleracea genomic clo...    42   0.30   2
(EJ556739) 1092959507711 Global-Ocean-Sampling_GS-29-01-01-1...    42   0.31   2
(FI731633) BOT01-78K12TR BOT01 Brassica oleracea genomic clo...    42   0.32   2
(CG730984) 1119131H08.y1 1119 - RescueMu Grid AA Zea mays ge...    36   0.32   3
(FI718654) BOT01-58J14TF BOT01 Brassica oleracea genomic clo...    42   0.32   2
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.34   14
(AC224573) Bos taurus clone CH240-481D11, WORKING DRAFT SEQU...    42   0.36   5
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8...    38   0.37   7
(BX005096) Zebrafish DNA sequence from clone CH211-132F13 in...    42   0.38   6
(DV848863) GH_LSL04A05.f GH_LSL Gossypium hirsutum cDNA clon...    42   0.38   2
(AC152518) Bos taurus clone CH240-12B5, WORKING DRAFT SEQUEN...    42   0.41   5
(CR545474) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    42   0.45   4
(AC176213) Strongylocentrotus purpuratus clone R3-3063M10, W...    48   0.46   5
(CR339048) Zebrafish DNA sequence from clone DKEY-27L15 in l...    48   0.47   1
(AL672178) Mouse DNA sequence from clone RP23-328O2 on chrom...    48   0.47   1
(AC189587) Brassica rapa subsp. pekinensis clone KBrH012K23,...    48   0.47   1
(AC189544) Brassica rapa subsp. pekinensis clone KBrH004I05,...    48   0.47   1
(AC129121) Rattus norvegicus clone CH230-320N10, WORKING DRA...    48   0.47   1
(AC098376) Rattus norvegicus clone CH230-2E4, WORKING DRAFT ...    48   0.47   1
(CU138534) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.47   1
(CR848701) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.47   1
(AC178765) Strongylocentrotus purpuratus clone R3-19G10, WOR...    48   0.47   1
(AK051572) Mus musculus 12 days embryo spinal ganglion cDNA,...    48   0.47   1
(FI262409) CccaBb041-C8JR CccABb Cajanus cajan genomic clone...    48   0.47   1
(BB656037) Mus musculus 12 days embryo spinal ganglion cDNA,...    48   0.47   1
(AC115584) Dictyostelium discoideum chromosome 2 map complem...    36   0.64   4
(CU467615) Zebrafish DNA sequence from clone CH211-125L3 in ...    38   0.66   4
(AC201727) Atelerix albiventris clone LB4-366M3, WORKING DRA...    38   0.69   3
(CU861944) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   0.70   4
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         34   0.80   7
(CR381644) Zebrafish DNA sequence from clone CH211-80A15 in ...    36   0.82   5
(AL662993) Oryza sativa genomic DNA, chromosome 4, BAC clone...    34   0.91   5
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    38   0.93   6
(BX571732) Zebrafish DNA sequence from clone DKEY-49H7 in li...    42   0.94   5
(AC124134) Mus musculus chromosome 12, clone RP23-235G12, co...    32   0.98   2
(AC125041) Mus musculus BAC clone RP23-337J19 from chromosom...    32   0.98   2
(CG722671) 1119073A06.x1 1119 - RescueMu Grid AA Zea mays ge...    34   1.0    2
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    34   1.2    8
(EA687373) Sequence 66252 from patent US 7365185.                  34   1.2    3
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    32   1.2    15
(AC099993) Mus musculus clone RP23-25L13, LOW-PASS SEQUENCE ...    38   1.2    2
(AP001680) Homo sapiens genomic DNA, chromosome 21q, section...    34   1.5    7
(DX552147) GH_MBb0022H15r GH_MBb Gossypium hirsutum genomic ...    42   1.5    2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    30   1.6    11
(AC176079) Strongylocentrotus purpuratus clone R3-1L23, WORK...    36   1.6    6
(AZ531707) ENTBO17TR Entamoeba histolytica Sheared DNA Entam...    36   1.7    3
(AM486242) Vitis vinifera contig VV79X011641.4, whole genome...    38   1.8    4
(AC153791) Mus musculus chromosome 15, clone RP24-269A21, co...    42   1.8    3
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    32   1.8    14
(CU074421) Zebrafish DNA sequence from clone DKEY-172O7 in l...    46   1.9    1
(AC187576) Pongo abelii BAC clone CH276-16H12 from chromosom...    46   1.9    1
(GM694809) Sequence 48 from Patent WO2008087040.                   46   1.9    1
(AC235816) Felis catus BAC clone FCAB-53H12 from chromosome ...    46   1.9    1
(AC204965) Homo sapiens FOSMID clone ABC10-45545200J11 from ...    46   1.9    1
(AC073881) Homo sapiens chromosome 15 clone CTD-2169K18 map ...    46   1.9    1
(AC068723) Homo sapiens chromosome 15 clone RP11-126E3 map 1...    46   1.9    1
(AC115320) Rattus norvegicus clone CH230-184J1, *** SEQUENCI...    46   1.9    1
(AC107561) Rattus norvegicus clone CH230-101L15, *** SEQUENC...    46   1.9    1
(AC084119) Homo sapiens chromosome 15 clone RP11-126E3 map 1...    46   1.9    1
(AC026628) Homo sapiens chromosome 16 clone RP11-778H15 map ...    46   1.9    1
(AC224516) Bos taurus clone CH240-483E20, WORKING DRAFT SEQU...    46   1.9    1
(AC170428) Bos taurus clone CH240-255N18, WORKING DRAFT SEQU...    46   1.9    1
(AC164221) Bos taurus clone CH240-148H5, *** SEQUENCING IN P...    46   1.9    1
(ET395281) S0171O04_SP6 CHORI-214 Salmo salar genomic clone ...    46   1.9    1
(ET311932) S0022E08_T7 CHORI-214 Salmo salar genomic clone S...    46   1.9    1
(ET279956) S0242K06_SP6 CHORI-214 Salmo salar genomic clone ...    46   1.9    1
(ER359660) 1092400805562 Global-Ocean-Sampling_GS-34-01-01-1...    46   1.9    1
(EK361275) 1095469001842 Global-Ocean-Sampling_GS-31-01-01-1...    46   1.9    1
(EK146139) 1095456022999 Global-Ocean-Sampling_GS-31-01-01-1...    46   1.9    1
(AM601373) Entamoeba invadens IP1 GSS, clone inv007f02.p1k.        46   1.9    1
(EI205571) MUGQ_CH252P205E07T7_CN324_028 CHORI-252 Vervet Mo...    46   1.9    1
(DX570981) MUGQ_CH252P049G02T7_AV1010_057 CHORI-252 Vervet M...    46   1.9    1
(DE418254) Bombyx mori genomic DNA, BAC clone:18E3D.               46   1.9    1
(EX275531) 1456513_5_D07_030 PY06 Carica papaya cDNA, mRNA s...    46   1.9    1
(EV490867) 195C02 Cotton Lambda Zap Express Library Gossypiu...    46   1.9    1
(AL929566) Zebrafish DNA sequence from clone CH211-159C13 in...    40   1.9    4
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    32   1.9    10
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    36   2.0    12
(AC174325) Medicago truncatula chromosome 8 clone mth2-16p19...    32   2.0    8
(CP001047) Mycoplasma arthritidis 158L3-1, complete genome.        34   2.0    10
(AM452666) Vitis vinifera contig VV78X253716.2, whole genome...    36   2.1    3
(ER542178) 1093016074493 Global-Ocean-Sampling_GS-35-01-01-1...    34   2.1    3
(AM446344) Vitis vinifera contig VV79X005414.2, whole genome...    40   2.1    2
(EU556754) Tetranychus urticae strain BR-VL mitochondrion, c...    36   2.2    5
(EU345430) Tetranychus urticae mitochondrion, complete genome.     36   2.2    5
(CG729104) 1119107G05.y1 1119 - RescueMu Grid AA Zea mays ge...    34   2.2    2
(AP007847) Lotus japonicus genomic DNA, chromosome 6, clone:...    36   2.3    3
(BP052912) Lotus japonicus cDNA, clone:SPDL015b09_f, 3' end.       38   2.4    2
(CZ907227) 4011006A05.y2 4011 - RescueMu Grid J Zea mays gen...    34   2.5    2
(AC080019) Genomic sequence for Oryza sativa, Nipponbare str...    34   2.5    6
(AC174281) Medicago truncatula clone mth2-12a20, WORKING DRA...    32   2.6    5
(CU207413) Pig DNA sequence from clone CH242-507C8 on chromo...    34   2.6    6
(CT030143) Zebrafish DNA sequence from clone CH73-68F17 in l...    40   2.6    3
(GC699333) Sequence 14578 from patent US 6812339.                  36   2.6    9
(GC699332) Sequence 14577 from patent US 6812339.                  36   2.6    9
(AC112734) Rattus norvegicus clone CH230-52J2, WORKING DRAFT...    34   2.6    8
(AC027133) Oryza sativa (japonica cultivar-group) chromosome...    34   2.7    4
(CU694935) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.7    7
(AC232850) Medicago truncatula chromosome 2 clone FOS169m21,...    36   2.7    4
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    32   2.8    6
(AL844509) Plasmodium falciparum 3D7 chromosome 13.                38   2.8    9
(BS000066) Pan troglodytes chromosome 22 clone:CH251-126A17,...    36   2.8    6
(CU694554) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   2.8    5
(BX465200) Zebrafish DNA sequence from clone DKEYP-24H12 in ...    34   2.9    6
(CS468878) Sequence 69 from Patent EP1748080.                      36   2.9    10
(CS468877) Sequence 68 from Patent EP1748080.                      36   2.9    10
(CS419355) Sequence 69 from Patent WO2006094836.                   36   2.9    10
(CS419354) Sequence 68 from Patent WO2006094836.                   36   2.9    10
(AC189465) Brassica rapa subsp. pekinensis clone KBrB076B03,...    38   2.9    4
(AC152516) Bos taurus clone CH240-15I6, WORKING DRAFT SEQUEN...    36   2.9    6
(CG730970) 1119131F03.y1 1119 - RescueMu Grid AA Zea mays ge...    34   2.9    3
(CZ907342) 4011006E10.y2 4011 - RescueMu Grid J Zea mays gen...    42   3.0    2
(AX346498) Sequence 1569 from Patent WO0200928.                    38   3.1    3
(CU019563) Zebrafish DNA sequence from clone DKEYP-87A6 in l...    32   3.2    8
(AC113390) Homo sapiens chromosome 5 clone RP11-360C3, compl...    34   3.3    7
(CZ907101) 4011005C08.y2 4011 - RescueMu Grid J Zea mays gen...    34   3.4    2
(AC006442) Homo sapiens, clone hRPK.7_A_1, complete sequence.      36   3.4    7
(AC125329) Mus musculus BAC clone RP23-198F7 from 10, comple...    40   3.5    3
(AC232553) Brassica rapa subsp. pekinensis clone KBrH013F17,...    38   3.6    4
(BH154209) ENTSL02TF Entamoeba histolytica Sheared DNA Entam...    34   3.6    2
(DC227453) Plasmodium berghei strain ANKA cDNA clone:SG00897...    36   3.7    2
(EK365438) 1095469395195 Global-Ocean-Sampling_GS-31-01-01-1...    42   3.8    2
(FJ402941) Shuttle vector NgoMIV, complete sequence.               38   4.1    2
(AL671861) Mouse DNA sequence from clone RP23-160B4 on chrom...    34   4.1    5
(BX914196) Zebrafish DNA sequence from clone DKEYP-71E8 in l...    34   4.2    8
(CR450815) Zebrafish DNA sequence from clone CH211-39F2 in l...    34   4.3    6
(CS730441) Sequence 371 from Patent WO2007095469.                  34   4.4    2
(CT523923) A BAC library has been constructed from cultivar ...    38   4.4    2
(EI000020) MUGQ_CH252P170A01T7_CN218_015 CHORI-252 Vervet Mo...    36   4.5    2
(EJ228972) 1092402551029 Global-Ocean-Sampling_GS-27-01-01-1...    34   4.5    2
(AE017308) Mycoplasma mobile 163K complete genome.                 32   4.5    15
(BX005359) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    40   4.6    7
(AC178597) Strongylocentrotus purpuratus clone R3-3021P24, W...    34   4.6    4
(FP325294) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   4.6    7
(AM460914) Vitis vinifera contig VV78X247504.29, whole genom...    40   4.7    3
(DU944764) 375836 Tomato EcoRI BAC Library Solanum lycopersi...    42   4.7    2
(DX557989) GH_MBb0089D09f GH_MBb Gossypium hirsutum genomic ...    32   4.7    2
(ER409763) 1095368013982 Global-Ocean-Sampling_GS-34-01-01-1...    34   4.8    2
(FI242748) CccaBb003-O13JR CccABb Cajanus cajan genomic clon...    42   4.8    2
(CU570852) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   4.9    6
(ER463334) 1092963907808 Global-Ocean-Sampling_GS-35-01-01-1...    40   5.2    2
(CR394556) Zebrafish DNA sequence from clone DKEY-79P17 in l...    44   5.7    3
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571...    32   5.7    5
(AM474275) Vitis vinifera contig VV78X093556.4, whole genome...    38   5.8    4
(CU457598) Pig DNA sequence from clone CH242-113C22 on chrom...    38   5.9    7
(AC117080) Dictyostelium discoideum chromosome 2 map complem...    32   5.9    7
(AM439864) Vitis vinifera, whole genome shotgun sequence, co...    36   6.1    4
(BX511250) Zebrafish DNA sequence from clone CH211-57K11 in ...    34   6.2    6
(AC116607) Homo sapiens chromosome 18, clone RP11-323P22, co...    38   6.4    7
(AM475222) Vitis vinifera contig VV78X060246.1, whole genome...    38   6.4    2
(BH146567) ENTPW70TF Entamoeba histolytica Sheared DNA Entam...    36   6.5    3
(AC233392) Solanum tuberosum chromosome 1 clone RH046O24, **...    34   6.5    5
(AP003666) Mus musculus genomic DNA, chromosome 16q clone:RP...    32   6.5    7
(AL713974) Mouse DNA sequence from clone RP23-135I10 on chro...    34   6.5    6
(BM598667) 17000687620110 A.Gam.ad.cDNA.blood1 Anopheles gam...    26   6.5    4
(CR392328) Zebrafish DNA sequence from clone DKEYP-108C1 in ...    34   6.6    8
(AP001138) Homo sapiens genomic DNA, chromosome 21q21.1-q21....    36   6.9    5
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255...    34   6.9    6
(AM428380) Vitis vinifera contig VV78X053551.5, whole genome...    36   6.9    3
(AC160074) Bos taurus clone CH240-83D19, WORKING DRAFT SEQUE...    38   6.9    4
(AC018432) Homo sapiens clone RP11-21P13, WORKING DRAFT SEQU...    36   7.0    4
(BM656709) 17000687389147 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   7.1    4
(BM654802) 17000687385176 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   7.1    4
(BM635719) 17000687559926 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   7.2    4
(CR759891) Zebrafish DNA sequence from clone DKEY-261I18 in ...    44   7.4    1
(CR388373) Zebrafish DNA sequence from clone DKEY-178O8 in l...    44   7.4    1
(CR376769) Zebrafish DNA sequence from clone CH211-120K3 in ...    44   7.4    1
(BX284673) Zebrafish DNA sequence from clone DKEY-71P21 in l...    44   7.4    1
(BX004836) Zebrafish DNA sequence from clone CH211-176O3 in ...    44   7.4    1
(CT010475) Mouse DNA sequence from clone RP23-386L14 on chro...    44   7.4    1
(AL928882) Mouse DNA sequence from clone RP23-281I20 on chro...    44   7.4    1
(AC159191) Mus musculus BAC clone RP24-158G12 from chromosom...    44   7.4    1
(BS000080) Pan troglodytes chromosome 22 clone:PTB-090L14, m...    44   7.4    1
(AM462248) Vitis vinifera contig VV78X235829.7, whole genome...    44   7.4    1
(GC698148) Sequence 13393 from patent US 6812339.                  44   7.4    1
(GC696856) Sequence 12101 from patent US 6812339.                  44   7.4    1
(AP001685) Homo sapiens genomic DNA, chromosome 21q, section...    44   7.4    1
(AP000959) Homo sapiens genomic DNA, chromosome 21 clone:RP1...    44   7.4    1
(AC117505) Homo sapiens 12 BAC RP11-162D11 (Roswell Park Can...    44   7.4    1
(AC111005) Homo sapiens BAC clone RP11-719L3 from 4, complet...    44   7.4    1
(AC068944) Homo sapiens BAC clone RP11-769N22 from 4, comple...    44   7.4    1
(AC112546) Rattus norvegicus clone CH230-231G5, *** SEQUENCI...    44   7.4    1
(AC112544) Rattus norvegicus clone CH230-230P7, *** SEQUENCI...    44   7.4    1
(FP325100) Brassica rapa subsp. pekinensis clone KBrB059F05,...    44   7.4    1
(AC073854) Homo sapiens chromosome 21 clone RP11-797G14, WOR...    44   7.4    1
(AC073833) Homo sapiens chromosome 12 clone RP11-162D11, WOR...    44   7.4    1
(AC055824) Homo sapiens clone RP11-24E17, WORKING DRAFT SEQU...    44   7.4    1
(CT030731) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   7.4    1
(BX004848) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    44   7.4    1
(AP010192) Lotus japonicus genomic DNA, clone: LjT12A09, TM1...    44   7.4    1
(AP009899) Lotus japonicus genomic DNA, clone: LjT30J19, TM2...    44   7.4    1
(AP008027) Lotus japonicus genomic DNA, chromosome 4, clone:...    44   7.4    1
(AC232000) Solanum tuberosum chromosome 1 clone RH019G04, **...    44   7.4    1
(AC224484) Bos taurus clone CH240-484A12, WORKING DRAFT SEQU...    44   7.4    1
(AC220097) Bos taurus clone CH240-362I15, WORKING DRAFT SEQU...    44   7.4    1
(AC204969) Homo sapiens chromosome UNK clone ABC9-46220000I1...    44   7.4    1
(AC189205) Brassica rapa subsp. pekinensis clone KBrB006O19,...    44   7.4    1
(AZ284843) RPCI-23-155D22.TJ RPCI-23 Mus musculus genomic cl...    44   7.4    1
(FI814157) SIR-65C19JR Sisymbrium irio BAC library SIR Sisym...    44   7.4    1
(FH747948) CHO_OF5016xp21r1.ab1 CHO_OF5 Nicotiana tabacum ge...    44   7.4    1
(FH577411) CHO_OF4246xl04f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   7.4    1
(FH406501) CHO_OF4842xg23f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   7.4    1
(ET983354) CHO_OF699xa06r1.ab1 CHO_OF Nicotiana tabacum geno...    44   7.4    1
(ER821907) POTKG25TR Solanum tuberosum RHPOTKEY BAC ends Sol...    44   7.4    1
(ER474211) 1092963983558 Global-Ocean-Sampling_GS-35-01-01-1...    44   7.4    1
(EK088600) 1092961185701 Global-Ocean-Sampling_GS-31-01-01-1...    44   7.4    1
(AQ000425) CIT-HSP-2288L16.TR CIT-HSP Homo sapiens genomic c...    44   7.4    1
(EJ127981) 1092343402506 Global-Ocean-Sampling_GS-27-01-01-1...    44   7.4    1
(EJ010578) 1095403678278 Global-Ocean-Sampling_GS-26-01-01-1...    44   7.4    1
(EI343162) GM_WBc0087N06.r GM_WBc Glycine max genomic clone ...    44   7.4    1
(ED866501) OA_CBa0014A01.r OA_CBa Oryza australiensis genomi...    44   7.4    1
(DX987742) CHORI103-7K19.TJ CHORI103 Schistosoma mansoni gen...    44   7.4    1
(DX095834) AU_BAC008A2H11_T7 CHORI212 Ictalurus punctatus ge...    44   7.4    1
(DU947283) 403323 Tomato EcoRI BAC Library Solanum lycopersi...    44   7.4    1
(DU673762) Bst006304 lambda03 Boechera stricta genomic clone...    44   7.4    1
(DU457323) 1098415974370 CHORI-243 Ovis aries genomic clone ...    44   7.4    1
(AL440836) T3 end of clone BD0AA015B04 of library BD0AA from...    44   7.4    1
(CZ913253) 4013001G06.2EL_x1 4013 - RescueMu Grid O Zea mays...    44   7.4    1
(CT502902) A BAC library has been constructed from cultivar ...    44   7.4    1
(CR811126) GR0AAA34DE03FM1 INRA BAC Bos taurus genomic clone...    44   7.4    1
(CR803898) GR0AAA24DE10RM1 INRA BAC Bos taurus genomic clone...    44   7.4    1
(CG732308) 1119147D08.y1 1119 - RescueMu Grid AA Zea mays ge...    44   7.4    1
(CE525063) tigr-gss-dog-17000365745280 Dog Library Canis lup...    44   7.4    1
(AG227748) Lotus japonicus DNA, clone:LjB15a06_r.                  44   7.4    1
(EB616528) AGENCOURT_54965253 D. mojavensis EST Drosophila m...    44   7.4    1
(AC150633) Bos taurus clone CH240-440P5, WORKING DRAFT SEQUE...    42   7.4    3
(DI124614) Glycosylphosphatidylinositol Containing Polypepti...    38   7.4    2
(DD146211) Glycosylphosphatidylinositol Containing Polypepti...    38   7.4    2
(AX771242) Sequence 5 from Patent WO03034275.                      38   7.4    2
(GP062347) Sequence 5 from patent US 7485713.                      38   7.4    2
(AC188106) Pongo abelii chromosome UNK clone CH276-57H12, co...    38   7.5    6
(BM619484) 17000687440450 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   7.5    4
(EU912541) Expression vector pDM326, complete sequence.            38   7.6    2
(AC197746) MACACA MULATTA BAC clone CH250-341I18 from chromo...    34   7.6    5
(AC102769) Mus musculus chromosome 17, clone RP23-89A3, comp...    38   7.6    3
(AC146341) Medicago truncatula chromosome 8 clone mth2-10g1,...    34   7.7    7
(BX663508) Zebrafish DNA sequence from clone CH211-144B6 in ...    36   7.8    5
(BX936380) Zebrafish DNA sequence from clone CH211-203K17 in...    36   7.8    6
(AC107808) Mus musculus chromosome 9, clone RP23-61B14, comp...    32   7.8    8
(EF028663) Cloning vector EXP4(+), complete sequence.              38   7.9    2
(AC229695) Medicago truncatula clone mth2-53l24, WORKING DRA...    38   7.9    6
(EF028664) Cloning vector EXP5(+), complete sequence.              38   7.9    2
(EU912539) Expression vector pDM304, complete sequence.            38   8.0    2
(EU698120) HIV-1 isolate 20478SASA3884XXxxxxxiDDDD1pcHS59XXX...    38   8.0    2
(EU912540) Expression vector pDM320, complete sequence.            38   8.0    2
(BD460422) Diagnosis of Diseases Associated with Cell Cycle.       30   8.0    5
(BD452344) Diagnosis of Diseases Associated with Cell Cycle.       30   8.0    5
(AX349007) Sequence 465 from Patent WO0202807.                     30   8.0    5
(AX251958) Sequence 219 from Patent WO0168911.                     30   8.0    5
(AC173823) Bos taurus clone CH240-90D13, WORKING DRAFT SEQUE...    38   8.1    6
(CU655855) Zebrafish DNA sequence from clone CH1073-121F8.         34   8.1    4
(CL573771) OB__Ba0019G17.r OB__Ba Oryza brachyantha genomic ...    34   8.2    2
(EU912542) Expression vector pDM358, complete sequence.            38   8.2    2
(AM462441) Vitis vinifera contig VV78X138874.7, whole genome...    34   8.2    3
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ...    36   8.3    15
(EF028666) Cloning vector pDV-NTAP, complete sequence.             38   8.5    2
(EF028669) Cloning vector pDV-CTAP, complete sequence.             38   8.5    2
(GN009420) Sequence 1861 from Patent EP2014669.                    38   8.5    5
(BM576520) 17000687162559 A.Gam.ad.cDNA.blood1 Anopheles gam...    26   8.5    4
(BM618663) 17000687439338 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   8.5    4
(EF028668) Cloning vector pDV-CYFP, complete sequence.             38   8.7    2
(EF028667) Cloning vector pDV-CGFP, complete sequence.             38   8.7    2
(EF028665) Cloning vector pDV-NYFP, complete sequence.             38   8.7    2
(BM644621) 17000687315084 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   8.7    4
(BM638543) 17000687566786 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   8.7    4
(AL161899) Human DNA sequence from clone RP11-418I10 on chro...    36   8.8    4
(BM639280) 17000687569869 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   8.9    4
(BM639769) 17000687573995 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   8.9    4
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    32   9.0    12
(CR352236) Zebrafish DNA sequence from clone DKEYP-123E12 in...    34   9.0    5
(BM649980) 17000687370212 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   9.1    4
(AL583802) Human DNA sequence from clone RP11-11J1 on chromo...    32   9.2    4
(EF028675) Cloning vector pDV-NTAP-CYFP, complete sequence.        38   9.2    2
(EF028674) Cloning vector pDV-NTAP-CGFP, complete sequence.        38   9.2    2
(EF028670) Cloning vector pDV-NTAP-NYFP, complete sequence.        38   9.2    2
(EF028673) Cloning vector pDV-CYFP-CTAP, complete sequence.        38   9.2    2
(EF028672) Cloning vector pDV-CGFP-CTAP, complete sequence.        38   9.2    2
(EF028671) Cloning vector pDV-NYFP-CTAP, complete sequence.        38   9.2    2
(AL713965) Human DNA sequence from clone RP4-681L3 on chromo...    38   9.4    3
(BM652745) 17000687376903 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   9.5    4
(BM649961) 17000687370186 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   9.5    4
(BM576554) 17000687162599 A.Gam.ad.cDNA.blood1 Anopheles gam...    26   9.5    4
(AM444398) Vitis vinifera contig VV78X151589.8, whole genome...    36   9.6    3
(AC180740) Strongylocentrotus purpuratus clone R3-3082L24, W...    36   9.6    4
(BM633387) 17000687507115 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   9.7    4
(AM462491) Vitis vinifera contig VV78X271965.7, whole genome...    38   9.7    3
(CG731076) 1119133B11.y1 1119 - RescueMu Grid AA Zea mays ge...    34   9.9    2
(BM641845) 17000687308801 A.Gam.ad.cDNA1 Anopheles gambiae c...    26   9.9    4
(BM589102) 17000687372213 A.Gam.ad.cDNA.blood1 Anopheles gam...    26   9.9    4
(AM475844) Vitis vinifera contig VV78X015325.8, whole genome...    34   9.9    4
(AC232504) Brassica rapa subsp. pekinensis clone KBrB057N22,...    34   10.0   5

>(C84852) Dictyostelium discoideum slug cDNA, clone SSG790.
          Length = 343

 Score =  660 bits (333), Expect = 0.0
 Identities = 333/333 (100%)
 Strand = Plus / Plus


Query: 375 tcatacaatttcctaaaattaaaccattcttttttaataaatcgattgaagaatggttta 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  tcatacaatttcctaaaattaaaccattcttttttaataaatcgattgaagaatggttta 69


Query: 435 attttaggaaattgtatgattggtattgtaccttgtaaagaaaaaattagaaatgaatca 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  attttaggaaattgtatgattggtattgtaccttgtaaagaaaaaattagaaatgaatca 129


Query: 495 gatccaattaaagcacaaccatcacaacttggtgatcactctttgaaaacaattgaaaag 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gatccaattaaagcacaaccatcacaacttggtgatcactctttgaaaacaattgaaaag 189


Query: 555 aaatatcatccagcaagatcagattatgacccacaatcattttcaaataataatgcatta 614
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaatatcatccagcaagatcagattatgacccacaatcattttcaaataataatgcatta 249


Query: 615 ggaacaccctcaagaccatcattcttttcaaaagttagtgaatatgtttttggttcaact 674
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ggaacaccctcaagaccatcattcttttcaaaagttagtgaatatgtttttggttcaact 309


Query: 675 taaattatttaataaataaatgaacaaaagaaa 707
           |||||||||||||||||||||||||||||||||
Sbjct: 310 taaattatttaataaataaatgaacaaaagaaa 342

 Score =  549 bits (277), Expect(2) = e-164
 Identities = 277/277 (100%)
 Strand = Plus / Minus


Query: 129 gttcatttatttattaaataatttaagttgaaccaaaaacatattcactaacttttgaaa 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gttcatttatttattaaataatttaagttgaaccaaaaacatattcactaacttttgaaa 275


Query: 189 agaatgatggtcttgagggtgttcctaatgcattattatttgaaaatgattgtgggtcat 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 agaatgatggtcttgagggtgttcctaatgcattattatttgaaaatgattgtgggtcat 215


Query: 249 aatctgatcttgctggatgatatttcttttcaattgttttcaaagagtgatcaccaagtt 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatctgatcttgctggatgatatttcttttcaattgttttcaaagagtgatcaccaagtt 155


Query: 309 gtgatggttgtgctttaattggatctgattcatttctaattttttctttacaaggtacaa 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gtgatggttgtgctttaattggatctgattcatttctaattttttctttacaaggtacaa 95


Query: 369 taccaatcatacaatttcctaaaattaaaccattctt 405
           |||||||||||||||||||||||||||||||||||||
Sbjct: 94  taccaatcatacaatttcctaaaattaaaccattctt 58

 Score = 61.9 bits (31), Expect(2) = e-164
 Identities = 31/31 (100%)
 Strand = Plus / Minus


Query: 423 aagaatggtttaattttaggaaattgtatga 453
           |||||||||||||||||||||||||||||||
Sbjct: 40  aagaatggtttaattttaggaaattgtatga 10

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 1,073,508,283
Number of extensions: 81085259
Number of successful extensions: 7082699
Number of sequences better than 10.0: 335
Length of query: 707
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 683
Effective length of database: 102,084,959,077
Effective search space: 69724027049591
Effective search space used: 69724027049591
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U05290-1 (Contig-U05290-1Q) /CSM_Contig/Contig-U05290-1Q.Seq.d
         (707 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116979_82(AC116979|pid:none) Dictyostelium discoideum chromoso...   189   9e-47

>AC116979_82(AC116979|pid:none) Dictyostelium discoideum chromosome
           2 map 6445720-6776760 strain AX4, complete sequence.
          Length = 522

 Score =  189 bits (479), Expect = 9e-47
 Identities = 91/92 (98%), Positives = 92/92 (100%)
 Frame = -3

Query: 429 HSSIDLLKKNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHSLKTIEKKYHPARSD 250
           +SSIDLLKKNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHSLKTIEKKYHPARSD
Sbjct: 431 YSSIDLLKKNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHSLKTIEKKYHPARSD 490

Query: 249 YDPQSFSNNNALGTPSRPSFFSKVSEYVFGST 154
           YDPQSFSNNNALGTPSRPSFFSKVSEYVFGST
Sbjct: 491 YDPQSFSNNNALGTPSRPSFFSKVSEYVFGST 522

 Score =  177 bits (449), Expect = 3e-43
 Identities = 88/106 (83%), Positives = 92/106 (86%)
 Frame = +3

Query: 357 YKVQYQSYNFLKLNHSFLINRLKNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHS 536
           ++ +Y S + LK          KNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHS
Sbjct: 427 FESEYSSIDLLK----------KNGLILGNCMIGIVPCKEKIRNESDPIKAQPSQLGDHS 476

Query: 537 LKTIEKKYHPARSDYDPQSFSNNNALGTPSRPSFFSKVSEYVFGST 674
           LKTIEKKYHPARSDYDPQSFSNNNALGTPSRPSFFSKVSEYVFGST
Sbjct: 477 LKTIEKKYHPARSDYDPQSFSNNNALGTPSRPSFFSKVSEYVFGST 522

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 893,402,520
Number of extensions: 16152037
Number of successful extensions: 42271
Number of sequences better than 10.0: 1
Number of HSP's gapped: 42263
Number of HSP's successfully gapped: 2
Length of query: 235
Length of database: 1,061,185,681
Length adjustment: 125
Effective length of query: 110
Effective length of database: 652,629,681
Effective search space: 71789264910
Effective search space used: 71789264910
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

 psg: 0.68  gvh: 0.48  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 36.0 %: nuclear
	 20.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for Contig-U05290-1 is cyt