| Contig-U05289-1 |
| Contig ID |
Contig-U05289-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
473 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
3042408 |
| End point |
3042881 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
5 |
| Link to clone list |
U05289 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 7.17 |
| Homology vs DNA |
Query= Contig-U05289-1 (Contig-U05289-1Q) /CSM_Contig/Contig-U05289-1Q.Seq.d
(473 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU270643) Dictyostelium discoideum vegetative cDNA clone:VS... 735 0.0 1
(AU267045) Dictyostelium discoideum vegetative cDNA clone:VS... 735 0.0 1
(AU267046) Dictyostelium discoideum vegetative cDNA clone:VS... 559 e-174 3
(AU270644) Dictyostelium discoideum vegetative cDNA clone:VS... 442 e-120 1
(AU073354) Dictyostelium discoideum slug cDNA, clone SSG764. 402 e-108 1
(BG140434) EST480876 wild tomato pollen Solanum pennellii cD... 46 2e-05 2
(BG137189) EST477631 wild tomato pollen Solanum pennellii cD... 46 2e-05 2
(CV735243) Cri2_12_J14_SP6 Ceratopteris Spore Library Cerato... 40 0.012 2
(EU496813) Nicotiana tabacum LIM domain protein 2b mRNA, com... 52 0.020 1
(ET047708) CHO_OF465xj20r1.ab1 CHO_OF Nicotiana tabacum geno... 52 0.020 1
(EA401940) Sequence 22 from patent US 7317136. 50 0.079 1
(ET044626) CHO_OF3681xf22r1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.079 1
(ET044625) CHO_OF3681xf22f1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.079 1
(ET044617) CHO_OF367xo08f1.ab1 CHO_OF Nicotiana tabacum geno... 50 0.079 1
(AM742980) Cucumis melo subsp. melo EST, clone 46d_33-G06-M13R. 50 0.079 1
(AM742608) Cucumis melo subsp. melo EST, clone 46d_30-C12-M13R. 50 0.079 1
(AM741637) Cucumis melo subsp. melo EST, clone 46d_18-C11-M13R. 50 0.079 1
(AM727518) Cucumis melo subsp. agrestis EST, clone A_30-D11-... 50 0.079 1
(AM725774) Cucumis melo subsp. melo EST, clone HS_16-C07-M13R. 50 0.079 1
(AM714947) Cucumis melo subsp. agrestis EST, clone AI_14-B01... 50 0.079 1
(FG201356) AGN_PNL231bf1_h8.trimmed.seq AGN_PNL Nicotiana ta... 50 0.079 1
(CU188051) Equus caballus GSS, BAC clone CH241-356J4, T7 end... 48 0.31 1
(BJ445702) Dictyostelium discoideum cDNA clone:ddv60i07, 3' ... 48 0.31 1
(BJ445483) Dictyostelium discoideum cDNA clone:ddv59h17, 3' ... 48 0.31 1
(BJ444200) Dictyostelium discoideum cDNA clone:ddv55h15, 3' ... 48 0.31 1
(BJ443206) Dictyostelium discoideum cDNA clone:ddv52a07, 3' ... 48 0.31 1
(BJ442719) Dictyostelium discoideum cDNA clone:ddv50c24, 3' ... 48 0.31 1
(BJ440528) Dictyostelium discoideum cDNA clone:ddv43p22, 3' ... 48 0.31 1
(BJ438782) Dictyostelium discoideum cDNA clone:ddv38p08, 3' ... 48 0.31 1
(BJ436232) Dictyostelium discoideum cDNA clone:ddv30a17, 3' ... 48 0.31 1
(BJ430714) Dictyostelium discoideum cDNA clone:ddv8n10, 3' e... 48 0.31 1
(BJ430668) Dictyostelium discoideum cDNA clone:ddv8p06, 3' e... 48 0.31 1
(FD978819) RR3G520TF RR3(NY) Raphanus raphanistrum subsp. ra... 48 0.31 1
(FD974989) RR3G520JQ RR3(NY) Raphanus raphanistrum subsp. ra... 48 0.31 1
(FD963136) RR1GB62TF RR1(CS) Raphanus raphanistrum subsp. ma... 48 0.31 1
(FD962394) RR1G303TF RR1(CS) Raphanus raphanistrum subsp. ma... 48 0.31 1
(FD959526) RR1GB62JQ RR1(CS) Raphanus raphanistrum subsp. ma... 48 0.31 1
(FD958963) RR1G303JQ RR1(CS) Raphanus raphanistrum subsp. ma... 48 0.31 1
(FD947001) RS2GH81TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 48 0.31 1
(FD943015) RS2GH81JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 48 0.31 1
(FD561789) RS1ES14TF RS1(AR) Raphanus sativus var. oleiformi... 48 0.31 1
(FD544188) RR2FT89TF RR2(MS) Raphanus raphanistrum subsp. ra... 48 0.31 1
(EX774614) RR4BR51JQ RR4(PB) Raphanus raphanistrum subsp. la... 48 0.31 1
(EX770419) RR4BR51TF RR4(PB) Raphanus raphanistrum subsp. la... 48 0.31 1
(AC172617) Bos taurus clone CH240-176O13, WORKING DRAFT SEQU... 46 1.00 3
(ER938250) AF__Bb0021G19f AF__Bb Aquilegia formosa genomic, ... 46 1.2 1
(ER363514) 1093018927020 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.2 1
(EJ400445) 1093012034062 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.2 1
(EC854997) HDE00001343 Hyperamoeba dachnaya Non-normalized (... 46 1.2 1
(EC853938) HDE00003441 Hyperamoeba dachnaya Non-normalized (... 46 1.2 1
(DR452924) CM007G09 Cotton Lambda Zap Express Library Gossyp... 46 1.2 1
(AM595542) Paracentrotus lividus EST, clone MPMGp1173A1798Q,... 46 1.2 1
(AM574225) Paracentrotus lividus EST, clone MPMGp1173H15128Q... 46 1.2 1
(AM548466) Paracentrotus lividus EST, clone MPMGp1171P14117Q... 46 1.2 1
(AM527892) Paracentrotus lividus EST, clone MPMGp1171P10205Q... 46 1.2 1
(AM221953) Paracentrotus lividus EST, clone MPMGp1174K0848Q,... 46 1.2 1
(AM221800) Paracentrotus lividus EST, clone MPMGp1174D2148Q,... 46 1.2 1
(AM208802) Paracentrotus lividus EST, clone MPMGp1174E1216Q,... 46 1.2 1
(AI729118) BNLGHi12682 Six-day Cotton fiber Gossypium hirsut... 46 1.2 1
(AI725953) BNLGHi13718 Six-day Cotton fiber Gossypium hirsut... 46 1.2 1
(BF272740) GA__Eb0015M13f Gossypium arboreum 7-10 dpa fiber ... 46 1.2 1
(EX172118) F05_F-26_044 Cotton 1-14 day post anthesis Lambda... 46 1.2 1
(ES804464) UFL_535_55 Cotton fiber 0-10 day post anthesis Go... 46 1.2 1
(CU694301) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.4 4
(CU302330) Medicago truncatula chromosome 5 clone mte1-65b11... 34 1.6 5
(AC164065) Bos taurus clone CH240-137H8, *** SEQUENCING IN P... 34 4.0 4
(AC130198) Felis catus clone RP86-609K6, WORKING DRAFT SEQUE... 38 4.2 2
(AC189360) Brassica rapa subsp. pekinensis clone KBrB045B23,... 42 4.7 3
(AC108799) Mus musculus, clone RP23-119G12, complete sequence. 44 4.9 1
(AC160227) Loxodonta africana clone VMRC15-528D5, complete s... 44 4.9 1
(AL136338) Human chromosome 14 DNA sequence BAC C-2022M23 of... 44 4.9 1
(AC156507) Bos taurus clone CH240-60D2, WORKING DRAFT SEQUEN... 44 4.9 1
(AC095920) Rattus norvegicus clone CH230-11B7, *** SEQUENCIN... 44 4.9 1
(CU463114) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.9 1
(AC177479) Strongylocentrotus purpuratus clone R3-1030E24, W... 44 4.9 1
(AC177478) Strongylocentrotus purpuratus clone R3-1030E17, W... 44 4.9 1
(AC170937) Bos taurus clone CH240-272L1, WORKING DRAFT SEQUE... 44 4.9 1
(BH530504) BOGHB12TF BOGH Brassica oleracea genomic clone BO... 44 4.9 1
(EE260329) RFAB854TH Castor bean cDNA library from flowers,8... 44 4.9 1
(EE259818) RFABI19TH Castor bean cDNA library from flowers,8... 44 4.9 1
(EE255361) RFAA772TH Castor bean cDNA library from flowers,8... 44 4.9 1
(DW532064) EST_ssal_plnb_700 plnb Salmo salar cDNA clone ssa... 44 4.9 1
(DW512310) GH_TMIRS_162_A11_F Cotton Normalized Library dT p... 44 4.9 1
(DW506371) GH_TMIRS_103_C07_F Cotton Normalized Library dT p... 44 4.9 1
(DW479058) GH_RMIRS_017_F03_021_F Cotton Normalized Library ... 44 4.9 1
(DW478879) GH_RMIRS_016_F03_R Cotton Normalized Library rand... 44 4.9 1
(DW476636) GH_RMIRS_004_B03_R Cotton Normalized Library rand... 44 4.9 1
(DW476635) GH_RMIRS_004_B03_F Cotton Normalized Library rand... 44 4.9 1
(DT047921) COT_CU_A08 Fiber and Ovule of Xu-142 Lambda Zap E... 44 4.9 1
(DR458537) CM066G09 Cotton Lambda Zap Express Library Gossyp... 44 4.9 1
(DR458136) CM062E12 Cotton Lambda Zap Express Library Gossyp... 44 4.9 1
(DR452999) CM008E12 Cotton Lambda Zap Express Library Gossyp... 44 4.9 1
(DN816958) G.hir-seedling 158 3 and 5 week old seedlings Gos... 44 4.9 1
(DN804350) G.hir-8-10 DAA bolls irrigated 150 8-10 DAA cotto... 44 4.9 1
(CU548504) Theobroma cacao, mRNA sequence (KZ0AAS3YA10FM1). 44 4.9 1
(CU531197) Theobroma cacao, mRNA sequence (KZ0AAK13YG02FM1). 44 4.9 1
(CO097908) GR__Ea21P24.r GR__Ea Gossypium raimondii cDNA clo... 44 4.9 1
(CO094613) GR__Ea16M24.r GR__Ea Gossypium raimondii cDNA clo... 44 4.9 1
(AI731610) BNLGHi10208 Six-day Cotton fiber Gossypium hirsut... 44 4.9 1
(BQ406710) GA__Ed0097H06f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BQ406508) GA__Ed0095D02f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(AI054962) coau0002K05 Cotton Boll Abscission Zone cDNA Libr... 44 4.9 1
(BM359786) GA__Ea0023M02r Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BM359147) GA__Ea0017C01r Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BG446389) GA__Eb0034G02f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BG443438) GA__Ea0020L04f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BG442372) GA__Ea0017C01f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BF272268) GA__Eb0014G12f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BF268719) GA__Eb0002K24f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(BE055835) GA__Ea0001J06f Gossypium arboreum 7-10 dpa fiber ... 44 4.9 1
(FG183325) AGN_PNL206cr1_b6.trimmed.seq AGN_PNL Nicotiana ta... 44 4.9 1
(EX166797) F01_P-28_012 Cotton 1-14 day post anthesis Lambda... 44 4.9 1
(EV962272) rpigca0_003055.y1 clu Sus scrofa cDNA 5', mRNA se... 44 4.9 1
(EV492291) 228G11 Cotton Lambda Zap Express Library Gossypiu... 44 4.9 1
(EV491755) 217C11 Cotton Lambda Zap Express Library Gossypiu... 44 4.9 1
(EV484827) 067F02 Cotton Lambda Zap Express Library Gossypiu... 44 4.9 1
(ES825098) UFL_338_42 Cotton fiber 0-10 day post anthesis Go... 44 4.9 1
(ES824219) UFL_365_40 Cotton fiber 0-10 day post anthesis Go... 44 4.9 1
(ES822993) UFL_448_76 Cotton fiber 0-10 day post anthesis Go... 44 4.9 1
(ES822606) UFL_362_22 Cotton fiber 0-10 day post anthesis Go... 44 4.9 1
(ES821497) UFL_466_38 Cotton fiber 0-10 day post anthesis Go... 44 4.9 1
(ES813394) UFL_300_16 Cotton fiber 0-10 day post anthesis Go... 44 4.9 1
(CP000553) Prochlorococcus marinus str. NATL1A, complete gen... 44 4.9 1
(AP009179) Sulfurovum sp. NBC37-1 genomic DNA, complete genome. 44 4.9 1
(CT145080) Sus scrofa genomic clone CH242-231J11, genomic su... 40 7.6 2
(AC092267) Homo sapiens chromosome 3 clone RP11-440L8, WORKI... 32 8.8 2
(AC063944) Homo sapiens 3 BAC RP11-446H18 (Roswell Park Canc... 32 8.8 2
(AC009651) Homo sapiens chromosome 3 clone RP11-417H23 map 3... 32 8.9 2
(AC107022) Homo sapiens 3 BAC RP11-417H23 (Roswell Park Canc... 32 9.1 2
(AL356430) Human DNA sequence from clone RP11-467B13 on chro... 40 9.2 3
>(AU270643) Dictyostelium discoideum vegetative cDNA clone:VSJ891,
5' end single read.
Length = 474
Score = 735 bits (371), Expect = 0.0
Identities = 371/371 (100%)
Strand = Plus / Plus
Query: 87 cctttctcgcacatataaataaactcttaaaatgtctaaatttggatcaactgaaaaatg 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 cctttctcgcacatataaataaactcttaaaatgtctaaatttggatcaactgaaaaatg 146
Query: 147 tattgtttgcactaaaactgtatacccattagaaaaattagcagctgatgaaaagattta 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 tattgtttgcactaaaactgtatacccattagaaaaattagcagctgatgaaaagattta 206
Query: 207 ccataaatcttgcttcaaatgcactgaatgtaattcaattctctctttaggaaaatatgc 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccataaatcttgcttcaaatgcactgaatgtaattcaattctctctttaggaaaatatgc 266
Query: 267 aagcaaagataatggtactctcttctgcaaagtttgcttcaaaaaattattctttagcaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagcaaagataatggtactctcttctgcaaagtttgcttcaaaaaattattctttagcaa 326
Query: 327 aggtaattactctgaaggttttggtcaactcaaaccacaacatgaattcgaaaagaagaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aggtaattactctgaaggttttggtcaactcaaaccacaacatgaattcgaaaagaagaa 386
Query: 387 aaatggtggtgaaaacaaagaagaaatcactccaagtgaagttgaagttgctgcatcttc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaatggtggtgaaaacaaagaagaaatcactccaagtgaagttgaagttgctgcatcttc 446
Query: 447 ataaacaataa 457
|||||||||||
Sbjct: 447 ataaacaataa 457
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 594,568,483
Number of extensions: 37474806
Number of successful extensions: 3255483
Number of sequences better than 10.0: 131
Length of query: 473
Length of database: 104,622,809,269
Length adjustment: 23
Effective length of query: 450
Effective length of database: 102,190,702,835
Effective search space: 45985816275750
Effective search space used: 45985816275750
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
|
| protein update |
2009. 8. 1 |
| Homology vs Protein |
Query= Contig-U05289-1 (Contig-U05289-1Q) /CSM_Contig/Contig-U05289-1Q.Seq.d
(473 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047797_1(BC047797|pid:none) Danio rerio LIM domain and actin b... 75 7e-13
EF119718_1(EF119718|pid:none) Homo sapiens xeplin variant 2 (CMY... 75 9e-13
AK122889_1(AK122889|pid:none) Homo sapiens cDNA FLJ16539 fis, cl... 75 9e-13
BC084208_1(BC084208|pid:none) Xenopus laevis hypothetical LOC495... 74 1e-12
AK031698_1(AK031698|pid:none) Mus musculus 13 days embryo male t... 74 2e-12
AK049350_1(AK049350|pid:none) Mus musculus ES cells cDNA, RIKEN ... 74 2e-12
AF307845_1(AF307845|pid:none) Mus musculus epithelial protein lo... 74 2e-12
BC031490_1(BC031490|pid:none) Mus musculus LIM domain and actin ... 74 2e-12
(Q9ERG0) RecName: Full=LIM domain and actin-binding protein 1; A... 74 2e-12
AB097518_1(AB097518|pid:none) Macaca fascicularis brain cDNA clo... 74 2e-12
BC172832_1(BC172832|pid:none) Synthetic construct Mus musculus c... 73 3e-12
BC121434_1(BC121434|pid:none) Xenopus tropicalis epithelial prot... 73 4e-12
AK000372_1(AK000372|pid:none) Homo sapiens cDNA FLJ20365 fis, cl... 72 5e-12
AF198455_1(AF198455|pid:none) Homo sapiens epithelial protein lo... 72 5e-12
AK096172_1(AK096172|pid:none) Homo sapiens cDNA FLJ38853 fis, cl... 72 5e-12
AB489164_1(AB489164|pid:none) Synthetic construct DNA, clone: pF... 72 5e-12
BC001247_1(BC001247|pid:none) Homo sapiens LIM domain and actin ... 72 6e-12
DQ364062_1(DQ364062|pid:none) Sus scrofa EPLIN-b mRNA, complete ... 72 6e-12
DQ364063_1(DQ364063|pid:none) Sus scrofa EPLIN-a mRNA, complete ... 72 6e-12
AM469183_1(AM469183|pid:none) Vitis vinifera contig VV78X221882.... 72 8e-12
AK085065_1(AK085065|pid:none) Mus musculus 13 days embryo lung c... 71 1e-11
(Q8BGB5) RecName: Full=LIM domain-containing protein 2; &AK0125... 70 2e-11
(Q4KM31) RecName: Full=LIM domain-containing protein 2; &BC0988... 70 2e-11
(Q9BT23) RecName: Full=LIM domain-containing protein 2; &AK0923... 70 3e-11
AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr... 70 3e-11
BC135680_1(BC135680|pid:none) Xenopus tropicalis epithelial prot... 69 5e-11
AJ721104_1(AJ721104|pid:none) Gallus gallus mRNA for hypothetica... 69 5e-11
EU186001_1(EU186001|pid:none) Lilium longiflorum LIM1 mRNA, comp... 68 9e-11
BT068434_1(BT068434|pid:none) Zea mays full-length cDNA clone ZM... 68 9e-11
BC088558_1(BC088558|pid:none) Xenopus tropicalis hypothetical LO... 68 1e-10
DQ213126_1(DQ213126|pid:none) Taeniopygia guttata clone 0058P002... 67 3e-10
CP001328_545(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 66 3e-10
AF187103_1(AF187103|pid:none) Helianthus annuus LIM domain prote... 66 3e-10
(P29675) RecName: Full=Pollen-specific protein SF3; &AF187104_1... 66 3e-10
EF145390_1(EF145390|pid:none) Populus trichocarpa clone WS01124_... 66 3e-10
EF035039_1(EF035039|pid:none) Populus tremula x Populus alba LIM... 66 3e-10
AM475696_4(AM475696|pid:none) Vitis vinifera contig VV78X042996.... 66 4e-10
EF035040_1(EF035040|pid:none) Populus tremula x Populus alba LIM... 65 7e-10
AB023479_1(AB023479|pid:none) Nicotiana tabacum mRNA for transcr... 65 7e-10
AC009273_19(AC009273|pid:none) Sequence of BAC T1N6 from Arabido... 65 1e-09
AB079513_1(AB079513|pid:none) Nicotiana tabacum Ntlim1 mRNA for ... 65 1e-09
AF184109_1(AF184109|pid:none) Nicotiana tabacum LIM domain prote... 65 1e-09
EF035038_1(EF035038|pid:none) Populus tremula x Populus alba LIM... 64 1e-09
AF187105_1(AF187105|pid:none) Helianthus annuus LIM domain prote... 64 1e-09
AB079511_1(AB079511|pid:none) Populus kitakamiensis Pklim1 gene ... 64 1e-09
AF116849_1(AF116849|pid:none) Helianthus annuus. 64 1e-09
AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote... 64 1e-09
EF148212_1(EF148212|pid:none) Populus trichocarpa clone WS0128_M... 64 2e-09
AF002109_4(AF002109|pid:none) Arabidopsis thaliana chromosome 2 ... 64 2e-09
EF146377_1(EF146377|pid:none) Populus trichocarpa clone WS0117_L... 64 2e-09
AB079512_1(AB079512|pid:none) Nicotiana tabacum Ntlim1 gene for ... 63 3e-09
BT053270_1(BT053270|pid:none) Medicago truncatula clone MTYFP_FQ... 63 3e-09
AF197568_1(AF197568|pid:none) Nicotiana tabacum pollen specific ... 63 3e-09
T50694(T50694) transcription factor L2 [imported] - Arabidopsis ... 63 4e-09
EU482903_1(EU482903|pid:none) Pinus taeda LIM2 transcription fac... 63 4e-09
AF049917_1(AF049917|pid:none) Petunia x hybrida PGPS/D1 (PGPS/D1... 63 4e-09
AK319026_1(AK319026|pid:none) Arabidopsis thaliana AT3G55770 mRN... 63 4e-09
AC125482_26(AC125482|pid:none) Medicago truncatula clone mth2-15... 63 4e-09
AK317129_1(AK317129|pid:none) Arabidopsis thaliana AT3G55770 mRN... 63 4e-09
BT036854_1(BT036854|pid:none) Zea mays full-length cDNA clone ZM... 62 5e-09
EF035036_1(EF035036|pid:none) Populus tremula x Populus alba str... 62 5e-09
EU957376_1(EU957376|pid:none) Zea mays clone 1590177 pollen-spec... 62 5e-09
EU496813_1(EU496813|pid:none) Nicotiana tabacum LIM domain prote... 62 5e-09
AF443117_1(AF443117|pid:none) Gossypium hirsutum LIM domain prot... 62 5e-09
EU962065_1(EU962065|pid:none) Zea mays clone 239982 pollen-speci... 62 8e-09
BT055434_1(BT055434|pid:none) Zea mays full-length cDNA clone ZM... 62 8e-09
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2... 62 8e-09
AK317367_1(AK317367|pid:none) Arabidopsis thaliana AT1G01780 mRN... 62 8e-09
AC160095_6(AC160095|pid:none) Solanum lycopersicum clone BB, com... 61 1e-08
BT062488_1(BT062488|pid:none) Zea mays full-length cDNA clone ZM... 61 1e-08
BT039056_1(BT039056|pid:none) Zea mays full-length cDNA clone ZM... 60 2e-08
BT061506_1(BT061506|pid:none) Zea mays full-length cDNA clone ZM... 60 2e-08
EF035035_1(EF035035|pid:none) Populus tremula x Populus alba str... 60 2e-08
EF147317_1(EF147317|pid:none) Populus trichocarpa clone WS0122_J... 60 2e-08
EU966603_1(EU966603|pid:none) Zea mays clone 295565 unknown mRNA. 60 3e-08
AF047353_1(AF047353|pid:none) Helianthus annuus LIM domain prote... 60 3e-08
AF116851_1(AF116851|pid:none) Nicotiana tabacum LIM domain prote... 60 3e-08
AC123899_21(AC123899|pid:none) Medicago truncatula clone mth2-33... 59 5e-08
EF082885_1(EF082885|pid:none) Picea sitchensis clone WS02728_E15... 59 5e-08
AB493659_1(AB493659|pid:none) Arabidopsis thaliana At3g61230 mRN... 59 7e-08
FN357451_41(FN357451|pid:none) Schistosoma mansoni genome sequen... 59 7e-08
AL137898_13(AL137898|pid:none) Arabidopsis thaliana DNA chromoso... 59 7e-08
AY810688_1(AY810688|pid:none) Schistosoma japonicum SJCHGC02485 ... 58 9e-08
AY810685_1(AY810685|pid:none) Schistosoma japonicum SJCHGC02486 ... 58 9e-08
AF370574_1(AF370574|pid:none) Arabidopsis thaliana transcription... 58 9e-08
EU976500_1(EU976500|pid:none) Zea mays clone 896310 unknown mRNA. 58 1e-07
AM462939_1(AM462939|pid:none) Vitis vinifera contig VV78X214253.... 58 1e-07
BT068142_1(BT068142|pid:none) Zea mays full-length cDNA clone ZM... 57 2e-07
EF035037_1(EF035037|pid:none) Populus tremula x Populus alba LIM... 57 2e-07
BC096905_1(BC096905|pid:none) Danio rerio similar to Epithelial ... 56 5e-07
(O60952) RecName: Full=LIM domain-containing protein E; AltName:... 55 6e-07
FN357691_4(FN357691|pid:none) Schistosoma mansoni genome sequenc... 55 8e-07
FN357691_3(FN357691|pid:none) Schistosoma mansoni genome sequenc... 55 8e-07
AL929264_5(AL929264|pid:none) Zebrafish DNA sequence from clone ... 54 1e-06
EU014896_1(EU014896|pid:none) Cyathostominae sp. JM-2007a LIM do... 54 1e-06
AF520715_1(AF520715|pid:none) Drosophila melanogaster MICAL long... 54 2e-06
BC090651_1(BC090651|pid:none) Mus musculus microtubule associate... 53 3e-06
AB384532_1(AB384532|pid:none) Synthetic construct DNA, clone: pF... 53 3e-06
AB463198_1(AB463198|pid:none) Synthetic construct DNA, clone: pF... 53 3e-06
(Q7RTP6) RecName: Full=Protein MICAL-3; 53 3e-06
BC085009_1(BC085009|pid:none) Homo sapiens microtubule associate... 53 3e-06
AK132669_1(AK132669|pid:none) Mus musculus adult male testis cDN... 53 3e-06
BC157876_1(BC157876|pid:none) Homo sapiens microtubule associate... 53 3e-06
BC138257_1(BC138257|pid:none) Mus musculus microtubule associate... 53 3e-06
BT078194_1(BT078194|pid:none) Lepeophtheirus salmonis Pacific fo... 53 4e-06
(Q9BIW5) RecName: Full=LIM domain-containing protein C; &AF3484... 53 4e-06
BX649444_1(BX649444|pid:none) Zebrafish DNA sequence from clone ... 52 5e-06
FN357583_5(FN357583|pid:none) Schistosoma mansoni genome sequenc... 52 7e-06
(Q8I7C3) RecName: Full=LIM and SH3 domain protein Lasp; &AE0142... 52 9e-06
AJ294538_1(AJ294538|pid:none) Drosophila melanogaster mRNA for L... 52 9e-06
FN314698_1(FN314698|pid:none) Schistosoma japonicum isolate Anhu... 52 9e-06
AE014296_2946(AE014296|pid:none) Drosophila melanogaster chromos... 52 9e-06
BT021808_1(BT021808|pid:none) Bos taurus hypothetical protein MG... 51 1e-05
(P34416) RecName: Full=LIM and SH3 domain protein F42H10.3; &L0... 51 1e-05
S44651(S44651)f42h10.4 protein - Caenorhabditis elegans 51 1e-05
BC083395_1(BC083395|pid:none) Danio rerio cysteine and glycine-r... 51 1e-05
AF121260_1(AF121260|pid:none) Homo sapiens myogenic factor LIM3 ... 50 2e-05
BC073402_1(BC073402|pid:none) Xenopus laevis MGC80860 protein, m... 50 2e-05
(P50461) RecName: Full=Cysteine and glycine-rich protein 3; ... 50 2e-05
BT056884_1(BT056884|pid:none) Salmo salar clone ssal-rgb2-651-15... 50 2e-05
AF520713_1(AF520713|pid:none) Drosophila melanogaster MICAL shor... 50 2e-05
BC121954_1(BC121954|pid:none) Xenopus tropicalis hypothetical pr... 50 2e-05
AF520714_1(AF520714|pid:none) Drosophila melanogaster MICAL medi... 50 2e-05
AB182287_1(AB182287|pid:none) Ciona intestinalis mRNA for lasp, ... 50 2e-05
AE014297_1097(AE014297|pid:none) Drosophila melanogaster chromos... 50 2e-05
DQ400409_1(DQ400409|pid:none) Oncorhynchus mykiss cysteine- and ... 50 2e-05
AE014297_1096(AE014297|pid:none) Drosophila melanogaster chromos... 50 2e-05
DQ215372_1(DQ215372|pid:none) Taeniopygia guttata clone 0058P001... 50 3e-05
DQ215368_1(DQ215368|pid:none) Taeniopygia guttata clone 0063P002... 50 3e-05
DQ215370_1(DQ215370|pid:none) Taeniopygia guttata clone 0058P002... 50 3e-05
BT046707_1(BT046707|pid:none) Salmo salar clone ssal-evd-508-234... 50 3e-05
FN314699_1(FN314699|pid:none) Schistosoma japonicum isolate Anhu... 50 3e-05
CR760512_1(CR760512|pid:none) Xenopus tropicalis finished cDNA, ... 49 4e-05
BT048524_1(BT048524|pid:none) Salmo salar clone ssal-eve-547-255... 49 4e-05
BC076911_1(BC076911|pid:none) Xenopus tropicalis cysteine and gl... 49 4e-05
Y17313_1(Y17313|pid:none) Oncorhynchus mykiss mRNA forcystein-ri... 49 4e-05
(P50463) RecName: Full=Cysteine and glycine-rich protein 3; ... 49 4e-05
AK138935_1(AK138935|pid:none) Mus musculus adult male aorta and ... 49 6e-05
BT058365_1(BT058365|pid:none) Salmo salar clone Contig4490 Cyste... 49 6e-05
(P97315) RecName: Full=Cysteine and glycine-rich protein 1; ... 49 6e-05
(P47875) RecName: Full=Cysteine and glycine-rich protein 1; ... 49 6e-05
AJ851697_1(AJ851697|pid:none) Gallus gallus mRNA for hypothetica... 49 6e-05
AK220353_1(AK220353|pid:none) Mus musculus mRNA for mKIAA0750 pr... 49 6e-05
(Q8BML1) RecName: Full=Protein MICAL-2; &AK030608_1(AK030608|pi... 49 6e-05
BT046510_1(BT046510|pid:none) Salmo salar clone ssal-eve-578-236... 49 6e-05
AF272888_1(AF272888|pid:none) Xenopus laevis LIM protein mRNA, c... 49 6e-05
Z99279_3(Z99279|pid:none) Caenorhabditis elegans YAC Y57G11A, co... 48 9e-05
BC081064_1(BC081064|pid:none) Xenopus laevis MGC81964 protein, m... 48 9e-05
BT049834_1(BT049834|pid:none) Salmo salar clone ssal-evd-530-178... 48 9e-05
(Q5RCT4) RecName: Full=Cysteine and glycine-rich protein 1; ... 48 1e-04
AK131508_1(AK131508|pid:none) Homo sapiens cDNA FLJ16726 fis, cl... 48 1e-04
(P50460) RecName: Full=Cysteine and glycine-rich protein 2; ... 48 1e-04
AK290133_1(AK290133|pid:none) Homo sapiens cDNA FLJ77815 complet... 48 1e-04
(P21291) RecName: Full=Cysteine and glycine-rich protein 1; ... 48 1e-04
AY890824_1(AY890824|pid:none) Synthetic construct Homo sapiens c... 48 1e-04
(Q05158) RecName: Full=Cysteine and glycine-rich protein 2; ... 48 1e-04
BT076027_1(BT076027|pid:none) Caligus rogercresseyi clone crog-e... 47 2e-04
AK302893_1(AK302893|pid:none) Homo sapiens cDNA FLJ58714 complet... 47 2e-04
AK302580_1(AK302580|pid:none) Homo sapiens cDNA FLJ58307 complet... 47 2e-04
AB110785_1(AB110785|pid:none) Homo sapiens MICAL2PV1 mRNA for fl... 47 2e-04
AB018293_1(AB018293|pid:none) Homo sapiens mRNA for KIAA0750 pro... 47 2e-04
AK294845_1(AK294845|pid:none) Homo sapiens cDNA FLJ61246 complet... 47 2e-04
(O94851) RecName: Full=Protein MICAL-2; &AB385380_1(AB385380|pi... 47 2e-04
(Q62908) RecName: Full=Cysteine and glycine-rich protein 2; ... 47 2e-04
(P97314) RecName: Full=Cysteine and glycine-rich protein 2; ... 47 2e-04
BC083298_1(BC083298|pid:none) Danio rerio zgc:101840, mRNA (cDNA... 47 2e-04
AB110786_1(AB110786|pid:none) Homo sapiens MICAL2PV2 mRNA for fl... 47 2e-04
AK012647_1(AK012647|pid:none) Mus musculus 10, 11 days embryo wh... 47 2e-04
BX538021_1(BX538021|pid:none) Homo sapiens mRNA; cDNA DKFZp686H2... 47 2e-04
BX641163_1(BX641163|pid:none) Homo sapiens mRNA; cDNA DKFZp686H0... 47 2e-04
(Q16527) RecName: Full=Cysteine and glycine-rich protein 2; ... 47 2e-04
AB182579_1(AB182579|pid:none) Mus musculus mRNA for JRAB, comple... 47 3e-04
AK220308_1(AK220308|pid:none) Mus musculus mRNA for mFLJ00139 pr... 47 3e-04
BC043300_1(BC043300|pid:none) Mus musculus RIKEN cDNA A930021H16... 47 3e-04
(Q9DCT8) RecName: Full=Cysteine-rich protein 2; Short=C... 46 4e-04
BC086356_1(BC086356|pid:none) Rattus norvegicus cysteine and gly... 46 4e-04
(P36201) RecName: Full=Cysteine-rich protein 2; Short=C... 46 4e-04
FJ907927_1(FJ907927|pid:none) Drosophila silvestris clone sv3E-A... 46 5e-04
AK074068_1(AK074068|pid:none) Homo sapiens mRNA for FLJ00139 pro... 45 6e-04
BC065956_1(BC065956|pid:none) Danio rerio cysteine and glycine-r... 45 6e-04
(Q8IY33) RecName: Full=MICAL-like protein 2; &BC037988_1(BC0379... 45 6e-04
EU832111_1(EU832111|pid:none) Synthetic construct Homo sapiens c... 45 6e-04
PDBN(1B8T)A MOL_ID: 1;MOL_ID: 1; MOLECULE: CRP1; MOLECULE: CRP1;... 45 6e-04
BC159242_1(BC159242|pid:none) Danio rerio cysteine-rich protein ... 45 8e-04
AK003328_1(AK003328|pid:none) Mus musculus 18-day embryo whole b... 45 8e-04
BT046266_1(BT046266|pid:none) Salmo salar clone ssal-evd-562-178... 45 8e-04
BT075050_1(BT075050|pid:none) Osmerus mordax clone omor-rgc-518-... 45 8e-04
BC044391_1(BC044391|pid:none) Danio rerio cysteine-rich protein ... 45 8e-04
BT082241_1(BT082241|pid:none) Anoplopoma fimbria clone afim-evh-... 45 0.001
AL832330_1(AL832330|pid:none) Homo sapiens mRNA; cDNA DKFZp451G1... 45 0.001
AL832025_1(AL832025|pid:none) Homo sapiens mRNA; cDNA DKFZp451J0... 45 0.001
AK056969_1(AK056969|pid:none) Homo sapiens cDNA FLJ32407 fis, cl... 45 0.001
AY177620_1(AY177620|pid:none) Homo sapiens nebulin-related ancho... 45 0.001
BC005933_1(BC005933|pid:none) Homo sapiens nebulin-related ancho... 45 0.001
AM392642_1(AM392642|pid:none) Synthetic construct Homo sapiens c... 45 0.001
BC126407_1(BC126407|pid:none) Homo sapiens nebulin-related ancho... 45 0.001
AM393795_1(AM393795|pid:none) Synthetic construct Homo sapiens c... 45 0.001
BX641052_1(BX641052|pid:none) Homo sapiens mRNA; cDNA DKFZp451M2... 45 0.001
AL831980_1(AL831980|pid:none) Homo sapiens mRNA; cDNA DKFZp451E2... 45 0.001
AY081943_1(AY081943|pid:none) Homo sapiens nebulin-related ancho... 45 0.001
BX640730_1(BX640730|pid:none) Homo sapiens mRNA; cDNA DKFZp451P1... 45 0.001
AL390197_3(AL390197|pid:none) Human DNA sequence from clone RP11... 45 0.001
(Q8TCH0) RecName: Full=Nebulin-related-anchoring protein; ... 45 0.001
BC058825_1(BC058825|pid:none) Homo sapiens nebulin-related ancho... 45 0.001
DQ213197_1(DQ213197|pid:none) Taeniopygia guttata clone 0058P005... 45 0.001
AY177621_1(AY177621|pid:none) Homo sapiens nebulin-related ancho... 45 0.001
AY223389_1(AY223389|pid:none) Schistosoma japonicum clone ZZZ288... 44 0.001
AM393530_1(AM393530|pid:none) Synthetic construct Homo sapiens c... 44 0.001
EZ000179_1(EZ000179|pid:none) TSA: Schistosoma japonicum SJCHGC0... 44 0.001
(P52943) RecName: Full=Cysteine-rich protein 2; Short=C... 44 0.001
AY891159_1(AY891159|pid:none) Synthetic construct Homo sapiens c... 44 0.001
BC084378_1(BC084378|pid:none) Xenopus laevis hypothetical LOC495... 44 0.001
DQ399457_1(DQ399457|pid:none) Ictalurus punctatus clone SND02A c... 44 0.002
BC146098_1(BC146098|pid:none) Bos taurus MICAL-like 2, mRNA (cDN... 44 0.002
(Q3B7M5) RecName: Full=LIM and SH3 domain protein 1; Sh... 44 0.002
BC077045_1(BC077045|pid:none) Xenopus tropicalis cysteine and gl... 44 0.002
AB114207_1(AB114207|pid:none) Gallus gallus lasp-2 mRNA for LIM ... 44 0.002
AK004645_1(AK004645|pid:none) Mus musculus adult male lung cDNA,... 44 0.002
AK129419_1(AK129419|pid:none) Mus musculus mRNA for mKIAA1668 pr... 44 0.002
CR942401_1(CR942401|pid:none) Xenopus tropicalis finished cDNA, ... 44 0.002
AB209311_1(AB209311|pid:none) Homo sapiens mRNA for nebulette no... 44 0.002
BC044681_1(BC044681|pid:none) Xenopus laevis LIM and SH3 protein... 44 0.002
(Q8BGT6) RecName: Full=MICAL-like protein 1; AltName: Full=Molec... 44 0.002
AJ580772_1(AJ580772|pid:none) Homo sapiens mRNA for LIM-nebulett... 44 0.002
AX885748_1(AX885748|pid:none) Sequence 1611 from Patent EP1033401. 44 0.002
(Q5R5W0) RecName: Full=LIM and SH3 domain protein 1; Sh... 44 0.002
AK302237_1(AK302237|pid:none) Homo sapiens cDNA FLJ61189 complet... 44 0.002
BC078491_1(BC078491|pid:none) Xenopus laevis MGC85263 protein, m... 44 0.002
BT049624_1(BT049624|pid:none) Salmo salar clone ssal-eve-524-233... 44 0.002
BC012460_1(BC012460|pid:none) Homo sapiens LIM and SH3 protein 1... 44 0.002
(Q14847) RecName: Full=LIM and SH3 domain protein 1; Sh... 44 0.002
(O77506) RecName: Full=LIM and SH3 domain protein 1; Sh... 44 0.002
AK296092_1(AK296092|pid:none) Homo sapiens cDNA FLJ58065 complet... 44 0.002
AK295522_1(AK295522|pid:none) Homo sapiens cDNA FLJ52195 complet... 44 0.002
AK289847_1(AK289847|pid:none) Homo sapiens cDNA FLJ76601 complet... 44 0.002
AJ851773_1(AJ851773|pid:none) Gallus gallus mRNA for hypothetica... 43 0.003
BC140607_1(BC140607|pid:none) Bos taurus nebulin-related anchori... 43 0.003
DQ157553_1(DQ157553|pid:none) Sus scrofa nebulin-related anchori... 43 0.003
BT025136_1(BT025136|pid:none) Drosophila melanogaster IP07084 fu... 43 0.003
BC117595_1(BC117595|pid:none) Danio rerio zgc:136406, mRNA (cDNA... 43 0.003
BC090913_1(BC090913|pid:none) Danio rerio zgc:103738, mRNA (cDNA... 43 0.003
(Q61792) RecName: Full=LIM and SH3 domain protein 1; Sh... 43 0.003
BC090092_1(BC090092|pid:none) Xenopus tropicalis MGC97606 protei... 43 0.003
BC052767_1(BC052767|pid:none) Danio rerio zgc:55358, mRNA (cDNA ... 43 0.004
AY177622_1(AY177622|pid:none) Mus musculus nebulin-related ancho... 43 0.004
AY177623_1(AY177623|pid:none) Mus musculus nebulin-related ancho... 43 0.004
BC129417_1(BC129417|pid:none) Danio rerio zgc:158737, mRNA (cDNA... 43 0.004
BC081239_1(BC081239|pid:none) Xenopus laevis MGC85577 protein, m... 43 0.004
BX936423_2(BX936423|pid:none) Zebrafish DNA sequence from clone ... 43 0.004
AB051455_1(AB051455|pid:none) Homo sapiens mRNA for KIAA1668 pro... 42 0.005
(Q8VDP3) RecName: Full=NEDD9-interacting protein with calponin h... 42 0.005
AL834373_1(AL834373|pid:none) Homo sapiens mRNA; cDNA DKFZp762G0... 42 0.005
AK171411_1(AK171411|pid:none) Mus musculus B6-derived CD11 +ve d... 42 0.005
AK159369_1(AK159369|pid:none) Mus musculus osteoclast-like cell ... 42 0.005
E88901(E88901) protein Y57G11A.1 [imported] - Caenorhabditis ele... 42 0.005
BC066574_1(BC066574|pid:none) Danio rerio LIM and SH3 protein 1,... 42 0.005
(Q9UH45) RecName: Full=MICAL-like protein 1; AltName: Full=Molec... 42 0.005
AL022311_5(AL022311|pid:none) Human DNA sequence from clone RP5-... 42 0.005
DQ167188_1(DQ167188|pid:none) Brassica rapa putative transcripti... 42 0.007
BT078787_1(BT078787|pid:none) Esox lucius clone eluc-evq-530-347... 42 0.007
AB209756_1(AB209756|pid:none) Homo sapiens mRNA for cysteine and... 42 0.007
AK296284_1(AK296284|pid:none) Homo sapiens cDNA FLJ56489 complet... 42 0.007
(Q8TDZ2) RecName: Full=NEDD9-interacting protein with calponin h... 42 0.007
CS300554_1(CS300554|pid:none) Sequence 62 from Patent EP1661986. 42 0.007
AK160384_1(AK160384|pid:none) Homo sapiens mRNA for FLJ00407 pro... 42 0.007
(Q0VFX8) RecName: Full=Cysteine-rich protein 2; &BC118323_1(BC1... 42 0.007
BC052983_1(BC052983|pid:none) Homo sapiens microtubule associate... 42 0.007
U80955_3(U80955|pid:none) Caenorhabditis elegans cosmid T04C9, c... 42 0.007
AK021999_1(AK021999|pid:none) Homo sapiens cDNA FLJ11937 fis, cl... 42 0.007
AL122098_1(AL122098|pid:none) Homo sapiens mRNA; cDNA DKFZp434B1... 42 0.007
AK025392_1(AK025392|pid:none) Homo sapiens cDNA: FLJ21739 fis, c... 42 0.007
BT082231_1(BT082231|pid:none) Anoplopoma fimbria clone afim-evh-... 42 0.009
AE014296_2365(AE014296|pid:none) Drosophila melanogaster chromos... 42 0.009
AY156993_1(AY156993|pid:none) Hirudo medicinalis cysteine-rich i... 42 0.009
T23237(T23237)hypothetical protein K02C4.4 - Caenorhabditis eleg... 41 0.012
FN317474_1(FN317474|pid:none) Schistosoma japonicum isolate Anhu... 41 0.012
AF489839_1(AF489839|pid:none) Caenorhabditis elegans lim and tra... 41 0.012
AY223359_1(AY223359|pid:none) Schistosoma japonicum SJCHGC00739 ... 41 0.012
BT081075_1(BT081075|pid:none) Caligus clemensi clone ccle-evs-50... 41 0.015
AL954848_4(AL954848|pid:none) Zebrafish DNA sequence from clone ... 40 0.026
(Q9YH16) RecName: Full=LIM domain only protein 3; Short... 40 0.026
BC079734_1(BC079734|pid:none) Xenopus laevis transcription facto... 40 0.026
(Q503U0) RecName: Full=LIM domain only protein 3; &AL954848_5(A... 40 0.026
AY813079_1(AY813079|pid:none) Schistosoma japonicum SJCHGC07563 ... 40 0.026
CR388093_5(CR388093|pid:none) Zebrafish DNA sequence from clone ... 40 0.026
AM393284_1(AM393284|pid:none) Synthetic construct Homo sapiens c... 40 0.034
CS300582_1(CS300582|pid:none) Sequence 90 from Patent EP1661986. 40 0.034
(Q924W9) RecName: Full=Rhombotin-1; AltName: Full=LIM domain onl... 40 0.034
(Q3B8H4) RecName: Full=Rhombotin-1; AltName: Full=LIM domain onl... 40 0.034
DQ413174_1(DQ413174|pid:none) Homo sapiens actin-binding LIM pro... 40 0.034
AK173040_1(AK173040|pid:none) Mus musculus mRNA for mKIAA0843 pr... 40 0.034
(Q68EY3) RecName: Full=LIM/homeobox protein Lhx9; Short... 40 0.034
AM393524_1(AM393524|pid:none) Synthetic construct Homo sapiens c... 40 0.034
BC039512_1(BC039512|pid:none) Homo sapiens, LIM domain only 1 (r... 40 0.034
AM392844_1(AM392844|pid:none) Synthetic construct Mus musculus c... 40 0.034
AM392595_1(AM392595|pid:none) Synthetic construct Homo sapiens c... 40 0.034
BT056551_1(BT056551|pid:none) Salmo salar clone ssal-rgb2-595-23... 40 0.034
AM393563_1(AM393563|pid:none) Synthetic construct Homo sapiens c... 40 0.034
(O94929) RecName: Full=Actin-binding LIM protein 3; AltName: Ful... 40 0.034
AM392963_1(AM392963|pid:none) Synthetic construct Homo sapiens c... 40 0.034
(P25800) RecName: Full=Rhombotin-1; AltName: Full=LIM domain onl... 40 0.034
CR860826_1(CR860826|pid:none) Pongo abelii mRNA; cDNA DKFZp469A2... 40 0.034
BC078530_1(BC078530|pid:none) Xenopus laevis MGC85360 protein, m... 40 0.034
AM393655_1(AM393655|pid:none) Synthetic construct Homo sapiens c... 40 0.034
(Q90881) RecName: Full=LIM/homeobox protein Lhx9; Short... 40 0.034
AM393559_1(AM393559|pid:none) Synthetic construct Homo sapiens c... 40 0.034
AM393554_1(AM393554|pid:none) Synthetic construct Homo sapiens c... 40 0.034
FJ438942_1(FJ438942|pid:none) Xenopus laevis LHX9 mRNA, complete... 40 0.034
AF459643_1(AF459643|pid:none) Homo sapiens filamin-binding LIM p... 40 0.034
AM393116_1(AM393116|pid:none) Synthetic construct Homo sapiens c... 40 0.034
JC5658(JC5658) LIM domain-containing homeodomain LH-2B - chicken... 40 0.034
AM393820_1(AM393820|pid:none) Synthetic construct Homo sapiens c... 40 0.034
AM393099_1(AM393099|pid:none) Synthetic construct Homo sapiens c... 40 0.034
BC142519_1(BC142519|pid:none) Bos taurus actin binding LIM prote... 40 0.034
DQ458799_1(DQ458799|pid:none) Trachemys scripta putative LIM hom... 40 0.034
AM392930_1(AM392930|pid:none) Synthetic construct Homo sapiens c... 40 0.034
AM393722_1(AM393722|pid:none) Synthetic construct Homo sapiens c... 40 0.034
DQ399420_1(DQ399420|pid:none) Ictalurus punctatus clone SPC01 cy... 40 0.034
AM393401_1(AM393401|pid:none) Synthetic construct Homo sapiens c... 40 0.034
AM392998_1(AM392998|pid:none) Synthetic construct Homo sapiens c... 40 0.034
DQ214007_1(DQ214007|pid:none) Taeniopygia guttata clone 0064P001... 40 0.034
DQ178131_1(DQ178131|pid:none) Protaetia brevitarsis Lim protein ... 39 0.044
AK300092_1(AK300092|pid:none) Homo sapiens cDNA FLJ56946 complet... 39 0.044
(Q56K04) RecName: Full=Cysteine-rich protein 1; &AY911323_1(AY9... 39 0.044
AJ311711_1(AJ311711|pid:none) Xenopus laevis partial mRNA for Lh... 39 0.044
BT081168_1(BT081168|pid:none) Caligus clemensi clone ccle-evs-51... 39 0.044
AB044745_1(AB044745|pid:none) Homo sapiens Nbla03267 mRNA, compl... 39 0.057
AB269883_1(AB269883|pid:none) Rana rugosa Lhx9 beta mRNA for LIM... 39 0.057
AK294474_1(AK294474|pid:none) Homo sapiens cDNA FLJ55199 complet... 39 0.057
AB269886_1(AB269886|pid:none) Rana rugosa Lhx9 epsilon mRNA for ... 39 0.057
AK095595_1(AK095595|pid:none) Homo sapiens cDNA FLJ38276 fis, cl... 39 0.057
AK294909_1(AK294909|pid:none) Homo sapiens cDNA FLJ50511 complet... 39 0.057
(A2PZF9) RecName: Full=LIM/homeobox protein Lhx9; Short... 39 0.057
AB269884_1(AB269884|pid:none) Rana rugosa Lhx9 gamma mRNA for LI... 39 0.057
BT075945_1(BT075945|pid:none) Caligus rogercresseyi clone crog-e... 39 0.057
JC2431(JC2431) cysteine-rich protein 1 - human &U09770_1(U09770... 39 0.057
AB269885_1(AB269885|pid:none) Rana rugosa Lhx9 delta mRNA for LI... 39 0.057
BC034128_1(BC034128|pid:none) Mus musculus LIM domain only 3, mR... 39 0.057
AY703482_1(AY703482|pid:none) Apriona germari muscle LIM protein... 39 0.057
AJ420132_1(AJ420132|pid:none) Cupiennius salei partial mRNA for ... 39 0.075
(P63254) RecName: Full=Cysteine-rich protein 1; AltName: Full=Cy... 39 0.075
AE014297_1029(AE014297|pid:none) Drosophila melanogaster chromos... 39 0.075
(Q5REN1) RecName: Full=Filamin-binding LIM protein 1; S... 39 0.075
AC114263_25(AC114263|pid:none) Dictyostelium discoideum chromoso... 39 0.075
BC064074_1(BC064074|pid:none) Mus musculus cysteine-rich protein... 39 0.075
(Q1LWV4) RecName: Full=LIM/homeobox protein Lhx9; Short... 39 0.075
BC093258_1(BC093258|pid:none) Danio rerio LIM homeobox 9, mRNA (... 39 0.075
AE013599_3230(AE013599|pid:none) Drosophila melanogaster chromos... 39 0.075
AF005862_1(AF005862|pid:none) Drosophila yakuba LIM domain prote... 39 0.075
AK088267_1(AK088267|pid:none) Mus musculus 2 days neonate thymus... 39 0.075
DQ311371_1(DQ311371|pid:none) Bombyx mori beadex/dLMO protein mR... 38 0.098
AB463553_1(AB463553|pid:none) Synthetic construct DNA, clone: pF... 38 0.098
AE014297_1030(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.098
AY555741_1(AY555741|pid:none) Homo sapiens LIM-only isoform A mR... 38 0.098
U14530_1(U14530|pid:none) Onchocerca volvulus Ovl3-1 mRNA, parti... 38 0.098
T20634(T20634) hypothetical protein F09B9.2 - Caenorhabditis ele... 38 0.098
AE014297_1031(AE014297|pid:none) Drosophila melanogaster chromos... 38 0.098
S61522(S61522) LMO protein - fruit fly (Drosophila sp.) &X83012... 38 0.098
AE014298_2865(AE014298|pid:none) Drosophila melanogaster chromos... 38 0.098
AF005654_1(AF005654|pid:none) Homo sapiens actin-binding double-... 38 0.13
AK093471_1(AK093471|pid:none) Homo sapiens cDNA FLJ36152 fis, cl... 38 0.13
CR858106_1(CR858106|pid:none) Pongo abelii mRNA; cDNA DKFZp468F1... 38 0.13
AF316038_1(AF316038|pid:none) Mus musculus actin-binding double ... 38 0.13
AB462929_1(AB462929|pid:none) Synthetic construct DNA, clone: pF... 38 0.13
BT076252_1(BT076252|pid:none) Caligus rogercresseyi clone crog-e... 38 0.13
AL133384_4(AL133384|pid:none) Human DNA sequence from clone RP11... 38 0.13
D31883_1(D31883|pid:none) Homo sapiens KIAA0059 mRNA, partial cds. 38 0.13
AK122196_1(AK122196|pid:none) Mus musculus mRNA for mKIAA0059 pr... 38 0.13
AL133384_7(AL133384|pid:none) Human DNA sequence from clone RP11... 38 0.13
(Q8WUP2) RecName: Full=Filamin-binding LIM protein 1; S... 38 0.13
FN357301_2(FN357301|pid:none) Schistosoma mansoni genome sequenc... 38 0.13
AK122891_1(AK122891|pid:none) Homo sapiens cDNA FLJ16546 fis, cl... 38 0.13
AL133384_8(AL133384|pid:none) Human DNA sequence from clone RP11... 38 0.13
AK171860_1(AK171860|pid:none) Mus musculus activated spleen cDNA... 38 0.13
T27937(T27937)hypothetical protein ZK622.2 - Caenorhabditis eleg... 37 0.17
AY815967_1(AY815967|pid:none) Schistosoma japonicum SJCHGC02224 ... 37 0.17
BC155652_1(BC155652|pid:none) Danio rerio zgc:172321, mRNA (cDNA... 37 0.17
EU247119_1(EU247119|pid:none) Lycosa singoriensis cysteine and g... 37 0.17
AY915415_1(AY915415|pid:none) Schistosoma japonicum SJCHGC06247 ... 37 0.17
BT048479_1(BT048479|pid:none) Salmo salar clone ssal-evd-567-121... 37 0.17
AB057733_1(AB057733|pid:none) Ciona savignyi Cs-LHX3 mRNA, compl... 37 0.17
FN357690_8(FN357690|pid:none) Schistosoma mansoni genome sequenc... 37 0.17
BX957309_6(BX957309|pid:none) Zebrafish DNA sequence from clone ... 37 0.17
AB005882_1(AB005882|pid:none) Gallus gallus mRNA for LIM homeodo... 37 0.17
U39998_7(U39998|pid:none) Caenorhabditis elegans cosmid ZK622, c... 37 0.17
BC091932_1(BC091932|pid:none) Danio rerio zgc:112954, mRNA (cDNA... 37 0.22
BT001714_1(BT001714|pid:none) Drosophila melanogaster RE67887 fu... 37 0.22
(A2I8Z7) RecName: Full=LIM/homeobox protein Lhx9; Short... 37 0.22
AY118632_1(AY118632|pid:none) Drosophila melanogaster RE73965 fu... 37 0.22
AY829796_1(AY829796|pid:none) Lonomia obliqua LIM protein 1 mRNA... 37 0.22
AE014135_212(AE014135|pid:none) Drosophila melanogaster chromoso... 37 0.22
FN357317_34(FN357317|pid:none) Schistosoma mansoni genome sequen... 37 0.22
AY461436_1(AY461436|pid:none) Bombyx mori Lim protein mRNA, comp... 37 0.22
DQ445509_1(DQ445509|pid:none) Graphocephala atropunctata isolate... 37 0.28
CR933519_5(CR933519|pid:none) Zebrafish DNA sequence from clone ... 37 0.28
(Q55GV9) RecName: Full=Calponin homology and LIM domain-containi... 37 0.28
BT075435_1(BT075435|pid:none) Osmerus mordax clone omor-rgc-510-... 37 0.28
AY534647_1(AY534647|pid:none) Oryzias latipes lhx9 mRNA, partial... 37 0.28
EF084222_1(EF084222|pid:none) Picea sitchensis clone WS02712_A01... 37 0.28
DQ431040_1(DQ431040|pid:none) Saccoglossus kowalevskii lim domai... 36 0.37
BC079524_1(BC079524|pid:none) Danio rerio zgc:92375, mRNA (cDNA ... 36 0.37
S29392(S29392)estradiol-stimulated protein ESP1 - rat 36 0.37
(Q1JQB5) RecName: Full=Filamin-binding LIM protein 1; S... 36 0.37
CR936426_1(CR936426|pid:none) Zebrafish DNA sequence from clone ... 36 0.37
DQ118097_1(DQ118097|pid:none) Danio rerio four and half LIM doma... 36 0.37
FN357301_36(FN357301|pid:none) Schistosoma mansoni genome sequen... 36 0.49
BC160411_1(BC160411|pid:none) Xenopus tropicalis hypothetical pr... 36 0.49
(P53669) RecName: Full=LIM domain kinase 1; Short=LIMK-... 36 0.49
U52003_8(U52003|pid:none) Caenorhabditis elegans cosmid ZK381, c... 36 0.49
(P50458) RecName: Full=LIM/homeobox protein Lhx2; Short... 35 0.63
A47179(A47179)homeotic protein LH-2 - rat 35 0.63
BC150043_1(BC150043|pid:none) Bos taurus LIM homeobox 5, mRNA (c... 35 0.63
AP009124_1(AP009124|pid:none) Sus scrofa genomic DNA, chromosome... 35 0.63
(P09088) RecName: Full=Mechanosensory protein 3; &L02877_1(L028... 35 0.63
EU112836_1(EU112836|pid:none) Helianthus annuus genotype ha61 LI... 35 0.63
(P29674) RecName: Full=LIM/homeobox protein Lhx1; Short... 35 0.63
AF329827_1(AF329827|pid:none) Rattus norvegicus zyxin mRNA, part... 35 0.63
AF013242_1(AF013242|pid:none) Xenopus laevis homeobox protein Li... 35 0.63
AL929566_1(AL929566|pid:none) Zebrafish DNA sequence from clone ... 35 0.63
(Q96IF1) RecName: Full=Protein ajuba; &AX429447_1(AX429447|pid:... 35 0.63
EU112849_1(EU112849|pid:none) Helianthus annuus genotype rha274 ... 35 0.63
(Q9Z0S2) RecName: Full=LIM/homeobox protein Lhx2; Short... 35 0.63
BC162549_1(BC162549|pid:none) Danio rerio LIM homeobox 2, mRNA (... 35 0.63
AY141037_1(AY141037|pid:none) Xenopus laevis LIM homeobox protei... 35 0.63
U11701_1(U11701|pid:none) Human LIM-homeobox domain protein (hLH... 35 0.63
AL929566_2(AL929566|pid:none) Zebrafish DNA sequence from clone ... 35 0.63
DQ146407_1(DQ146407|pid:none) Danio rerio lim homeobox transcrip... 35 0.63
(Q91XC0) RecName: Full=Protein ajuba; &BC011035_1(BC011035|pid:... 35 0.63
(Q9H2C1) RecName: Full=LIM/homeobox protein Lhx5; Short... 35 0.63
AK027597_1(AK027597|pid:none) Homo sapiens cDNA FLJ14691 fis, cl... 35 0.63
(Q5M8V8) RecName: Full=Rhombotin-2; AltName: Full=LIM domain onl... 35 0.63
AB188255_1(AB188255|pid:none) Danio rerio lhx2 mRNA for LIM home... 35 0.63
AF124735_1(AF124735|pid:none) Homo sapiens LIM-homeodomain prote... 35 0.63
BC127381_1(BC127381|pid:none) Danio rerio LIM homeobox 2, mRNA (... 35 0.63
AY892978_1(AY892978|pid:none) Synthetic construct Homo sapiens c... 35 0.63
AK094511_1(AK094511|pid:none) Homo sapiens cDNA FLJ37192 fis, cl... 35 0.63
U79776_1(U79776|pid:none) Mus musculus ajuba (Ajuba) mRNA, compl... 35 0.63
(P61375) RecName: Full=LIM/homeobox protein Lhx5; Short... 35 0.63
BC128722_1(BC128722|pid:none) Rattus norvegicus cDNA clone MGC:1... 35 0.83
AL590115_6(AL590115|pid:none) Human DNA sequence from clone RP11... 35 0.83
DQ118096_1(DQ118096|pid:none) Danio rerio four and half LIM doma... 35 0.83
BT046814_1(BT046814|pid:none) Salmo salar clone ssal-evd-532-212... 35 0.83
AJ243851_1(AJ243851|pid:none) Mus musculus mRNA for putative LIM... 35 0.83
BT045068_1(BT045068|pid:none) Salmo salar clone ssal-rgf-511-052... 35 0.83
BT073006_1(BT073006|pid:none) Oncorhynchus mykiss clone omyk-evn... 35 0.83
BT079168_1(BT079168|pid:none) Esox lucius clone eluc-evq-509-105... 35 0.83
BX640578_9(BX640578|pid:none) Mouse DNA sequence from clone RP23... 35 0.83
JG0164(JG0164)LIM protein, FHL4 - mouse 35 0.83
AJ243852_2(AJ243852|pid:none) Mus musculus Lhx9 gene, partial ex... 35 0.83
(Q90476) RecName: Full=LIM/homeobox protein Lhx1; Short... 35 0.83
BT075353_1(BT075353|pid:none) Osmerus mordax clone omor-rgc-504-... 35 0.83
AL590115_3(AL590115|pid:none) Human DNA sequence from clone RP11... 35 0.83
BX640578_13(BX640578|pid:none) Mouse DNA sequence from clone RP2... 35 0.83
AF257211_1(AF257211|pid:none) Homo sapiens LMO2b splice variant ... 35 0.83
(A0JNI8) RecName: Full=LIM/homeobox protein Lhx9; Short... 35 0.83
BT021834_1(BT021834|pid:none) Bos taurus LIM homeobox 9 (LHX9), ... 35 0.83
(P25791) RecName: Full=Rhombotin-2; AltName: Full=LIM domain onl... 35 0.83
AF527619_1(AF527619|pid:none) Rattus norvegicus LIM-homeodomain ... 35 0.83
AK342987_1(AK342987|pid:none) Acyrthosiphon pisum ACYPI006302 mR... 35 0.83
AJ243852_1(AJ243852|pid:none) Mus musculus Lhx9 gene, partial ex... 35 0.83
(Q9NQ69) RecName: Full=LIM/homeobox protein Lhx9; Short... 35 0.83
(Q1LZ94) RecName: Full=Rhombotin-2; AltName: Full=LIM domain onl... 35 0.83
AJ277915_1(AJ277915|pid:none) Homo sapiens partial mRNA for LIM-... 35 0.83
(P34765) RecName: Full=Mechanosensory protein 3; &A39479(A39479... 35 0.83
DQ225183_1(DQ225183|pid:none) Sparus aurata four and a half LIM ... 35 1.1
BC083393_1(BC083393|pid:none) Danio rerio zgc:103466, mRNA (cDNA... 35 1.1
AK141086_1(AK141086|pid:none) Mus musculus 0 day neonate cerebel... 35 1.1
(P53411) RecName: Full=LIM/homeobox protein Lhx1; Short... 35 1.1
AY650378_1(AY650378|pid:none) Macaca fascicularis LIM homeobox p... 35 1.1
BC020470_1(BC020470|pid:none) Homo sapiens LIM homeobox 1, mRNA ... 35 1.1
(P63006) RecName: Full=LIM/homeobox protein Lhx1; Short... 35 1.1
FN357876_6(FN357876|pid:none) Schistosoma mansoni genome sequenc... 35 1.1
AK298253_1(AK298253|pid:none) Homo sapiens cDNA FLJ58086 complet... 35 1.1
AY575212_1(AY575212|pid:none) Oryctolagus cuniculus Lim1 mRNA, p... 35 1.1
(P48742) RecName: Full=LIM/homeobox protein Lhx1; Short... 35 1.1
AJ420133_1(AJ420133|pid:none) Cupiennius salei partial mRNA for ... 35 1.1
AY217780_1(AY217780|pid:none) Scyliorhinus canicula ScLim1 mRNA,... 34 1.4
DQ266432_1(DQ266432|pid:none) Homo sapiens FHL2 isoform 5 mRNA, ... 34 1.4
G01507(G01507) LIM domain transcription factor LIM-1 - human &U... 34 1.4
AF053486_1(AF053486|pid:none) Mus musculus LIM-protein FHL4 (Fhl... 34 1.4
BC124831_1(BC124831|pid:none) Danio rerio zgc:154176, mRNA (cDNA... 34 1.4
AY892743_1(AY892743|pid:none) Synthetic construct Homo sapiens c... 34 1.4
BC093136_1(BC093136|pid:none) Danio rerio LIM domain only 2, mRN... 34 1.4
CU652212_3(CU652212|pid:none) Zebrafish DNA sequence from clone ... 34 1.4
(Q4R7A4) RecName: Full=Four and a half LIM domains protein 5; ... 34 1.4
BC061148_1(BC061148|pid:none) Mus musculus four and a half LIM d... 34 1.4
DQ307067_1(DQ307067|pid:none) Homo sapiens bone marrow four and ... 34 1.4
FN392319_159(FN392319|pid:none) Pichia pastoris GS115 chromosome... 34 1.4
BT059646_1(BT059646|pid:none) Salmo salar clone ssal-rgf-502-137... 34 1.4
AY113460_1(AY113460|pid:none) Drosophila melanogaster RE37250 fu... 34 1.8
U83086_1(U83086|pid:none) Dictyostelium discoideum LimA (limA) m... 34 1.8
BC171171_1(BC171171|pid:none) Xenopus tropicalis cDNA clone MGC:... 34 1.8
BC082347_1(BC082347|pid:none) Xenopus tropicalis fhl3 protein, m... 34 1.8
AE014296_2990(AE014296|pid:none) Drosophila melanogaster chromos... 34 1.8
BC021468_1(BC021468|pid:none) Mus musculus four and a half LIM d... 34 1.8
T27637(T27637)hypothetical protein ZC64.4 - Caenorhabditis elegans 34 1.8
AE014296_2988(AE014296|pid:none) Drosophila melanogaster chromos... 34 1.8
BC157176_1(BC157176|pid:none) Xenopus tropicalis hypothetical pr... 34 1.8
(Q54QR1) RecName: Full=LIM domain-containing protein A; 34 1.8
BC073254_1(BC073254|pid:none) Xenopus laevis MGC80605 protein, m... 34 1.8
>BC047797_1(BC047797|pid:none) Danio rerio LIM domain and actin
binding 1, mRNA (cDNA clone MGC:55222 IMAGE:3819889),
complete cds. &BC164794_1(BC164794|pid:none)
Length = 629
Score = 75.1 bits (183), Expect = 7e-13
Identities = 39/87 (44%), Positives = 48/87 (55%)
Frame = +1
Query: 112 LKMSKFGSTEKCIVCTKTVYPLEKLAADEKIYHKSCFKCTECNSILSLGKYASKDNGTXX 291
+KM E C+ C KTVYPLEKL A+++IYH +CF+C CN+ LSL YAS N
Sbjct: 275 VKMFPLPVRETCVTCLKTVYPLEKLVANQQIYHNTCFRCAYCNTKLSLVNYASLHNNV-Y 333
Query: 292 XXXXXXXXXXXXGNYSEGFGQLKPQHE 372
GNY EGFG +P E
Sbjct: 334 CKPHYCQLFKAKGNYDEGFGH-RPHKE 359
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 512,524,743
Number of extensions: 7737787
Number of successful extensions: 16988
Number of sequences better than 10.0: 673
Number of HSP's gapped: 16914
Number of HSP's successfully gapped: 833
Length of query: 157
Length of database: 1,061,185,681
Length adjustment: 118
Effective length of query: 39
Effective length of database: 675,508,817
Effective search space: 26344843863
Effective search space used: 26344843863
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
2 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |