| Contig-U05251-1 |
| Contig ID |
Contig-U05251-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
664 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
2009688 |
| End point |
2010352 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
3 |
| Number of EST |
3 |
| Link to clone list |
U05251 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 7.16 |
| Homology vs DNA |
Query= Contig-U05251-1 (Contig-U05251-1Q) /CSM_Contig/Contig-U05251-1Q.Seq.d
(664 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU264880) Dictyostelium discoideum vegetative cDNA clone:VS... 509 0.0 3
(AU073262) Dictyostelium discoideum slug cDNA, clone SSG521. 369 e-119 2
(AU261844) Dictyostelium discoideum vegetative cDNA clone:VS... 200 5e-47 1
(FC635540) CAXT9840.fwd CAXT Lottia gigantea from mantle Lot... 52 4e-09 4
(FK724738) av02079k03r1.1 Symbiotic sea anemone (Anemonia vi... 40 5e-08 3
(FK753021) av02111m08r1.1 Symbiotic sea anemone (Anemonia vi... 40 5e-08 3
(FF613254) G825P5172RA5.T0 Acorn worm normalized gastrula pE... 66 2e-06 1
(AE017263) Mesoplasma florum L1 complete genome. 36 3e-04 13
(CT320179) Sus scrofa genomic clone CH242-321F1, genomic sur... 54 0.007 1
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699... 42 0.008 14
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 38 0.026 16
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 42 0.036 15
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 42 0.036 15
(AP000946) Homo sapiens genomic DNA, chromosome 21q21.1-q21.... 40 0.15 7
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 36 0.27 17
(AC226643) Microcebus murinus clone CH257-317O3, WORKING DRA... 40 0.27 4
(AY730723) Campylobacter jejuni strain CG8023 plasmid Cjp29-... 38 0.32 2
(AY730722) Campylobacter jejuni strain CG8087 plasmid Cjp29-... 38 0.32 2
(EX178060) gmnbmd_0001h22.pDNRm13r Gadus morhua digestive ti... 34 0.33 2
(EY117187) HA_MX1_83g12_SP6 Lobster Multiple Tissues, Normal... 34 0.33 2
(FD483525) HA_MX2_38a10_SP6 Lobster Multiple Tissues, Normal... 34 0.33 2
(EX827352) HA_MX1_74e07_SP6 Lobster Multiple Tissues, Normal... 34 0.33 2
(EX827351) HA_MX1_74e06_SP6 Lobster Multiple Tissues, Normal... 34 0.33 2
(AC020604) Homo sapiens BAC clone RP11-536C12 from 2, comple... 40 0.37 3
(AM446997) Vitis vinifera, whole genome shotgun sequence, co... 48 0.44 1
(CT545847) A BAC library has been constructed from cultivar ... 48 0.44 1
(BI501633) rm03a06.y1 Meloidogyne arenaria egg pAMP1 v1 Chia... 48 0.44 1
(AC192823) Gallus gallus BAC clone TAM32-69P18 from chromoso... 38 0.44 5
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 34 0.50 10
(AC219125) Microcebus murinus clone CH257-465P20, WORKING DR... 40 0.52 4
(DQ077553) Uncultured bacterium MedeBAC35C06 clone MedeBAC35... 38 0.56 3
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 38 0.61 15
(CP000025) Campylobacter jejuni RM1221, complete genome. 36 0.62 16
(AK042943) Mus musculus 7 days neonate cerebellum cDNA, RIKE... 38 0.74 2
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 44 0.86 14
(AE017308) Mycoplasma mobile 163K complete genome. 36 0.91 15
(AC098470) Rattus norvegicus clone CH230-2D23, *** SEQUENCIN... 40 0.97 7
(EK477142) 1095469490568 Global-Ocean-Sampling_GS-32-01-01-1... 30 1.0 3
(FG293513) 1108770672498 New World Screwworm Larvae 9387 EST... 36 1.1 2
(AL766853) Streptococcus agalactiae NEM316 complete genome, ... 36 1.2 3
(EY661807) CS00-C1-101-037-C02-CT.F Sweet orange leaf, infec... 36 1.2 2
(GC699486) Sequence 14731 from patent US 6812339. 40 1.2 4
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 36 1.3 9
(AC146711) Medicago truncatula clone mth2-114d1, complete se... 38 1.3 6
(BC151171) Mus musculus RIKEN cDNA 3222402P14 gene, mRNA (cD... 38 1.5 2
(BC151170) Mus musculus RIKEN cDNA 3222402P14 gene, mRNA (cD... 38 1.5 2
(DN569272) 91565765 Sea Urchin primary mesenchyme cell cDNA ... 32 1.6 3
(AM052955) Entodinium caudatum EST, clone Entodinium41H. 42 1.7 2
(AC214272) MACACA MULATTA BAC clone CH250-398H8 from chromos... 46 1.7 1
(AC012328) Arabidopsis thaliana chromosome III BAC T17B22 ge... 46 1.7 1
(AC215207) Macaca mulatta chromosome UNKNOWN clone CH250-187... 46 1.7 1
(AZ669893) ENTFX06TR Entamoeba histolytica Sheared DNA Entam... 46 1.7 1
(AZ550009) ENTGC72TF Entamoeba histolytica Sheared DNA Entam... 46 1.7 1
(EJ206862) 1092344361402 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.7 1
(CP000885) Clostridium phytofermentans ISDg, complete genome. 46 1.7 1
(AC111640) Rattus norvegicus clone CH230-100J21, *** SEQUENC... 34 1.9 6
(AC169759) Bos taurus clone CH240-216J20, WORKING DRAFT SEQU... 34 1.9 5
(AC102375) Mus musculus chromosome 3, clone RP23-281M6, comp... 36 2.0 7
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 34 2.0 17
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 34 2.1 17
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 36 2.2 8
(AC212533) Chlorocebus aethiops clone CH252-337F11, WORKING ... 38 2.2 2
(AC022219) Homo sapiens chromosome 1 clone RP11-784D3, WORKI... 36 2.4 7
(EC822300) SME00009010 esmbsro2 Sawyeria marylandensis cDNA,... 32 2.5 3
(EC822653) SME00008922 esmbsro2 Sawyeria marylandensis cDNA,... 32 2.7 3
(EC823926) SME00007649 esmbsro2 Sawyeria marylandensis cDNA,... 32 2.8 3
(BM169711) EST572234 PyBS Plasmodium yoelii yoelii cDNA clon... 42 2.9 2
(AM655467) Entamoeba moshkovskii FIC GSS, clone mosh025c01.q1k. 34 3.0 2
(AC013394) Homo sapiens chromosome 15, clone RP11-437B10, co... 40 3.0 4
(BX571976) Zebrafish DNA sequence from clone DKEY-174I19 in ... 44 3.0 4
(CP001057) Clostridium botulinum B str. Eklund 17B plasmid p... 34 3.3 5
(AC159829) Mus musculus 10 BAC RP23-269H11 (Roswell Park Can... 32 3.4 2
(EJ811621) 1093017492382 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.6 2
(ED771287) GM_WBb0146F11.r GM_WBb Glycine max genomic clone ... 36 3.8 2
(ER285192) 1092343563076 Global-Ocean-Sampling_GS-34-01-01-1... 42 3.9 2
(EJ611410) 1092962048156 Global-Ocean-Sampling_GS-29-01-01-1... 42 3.9 2
(AP006716) Staphylococcus haemolyticus JCSC1435 DNA, complet... 34 3.9 22
(DT768256) EST1202105 Aquilegia cDNA library Aquilegia formo... 42 4.0 2
(EJ895507) 1093018465338 Global-Ocean-Sampling_GS-30-02-01-1... 34 4.0 2
(AC141113) Medicago truncatula clone mth2-7h7, complete sequ... 36 4.1 6
(EK460737) 1095469265024 Global-Ocean-Sampling_GS-32-01-01-1... 42 4.1 2
(BH133019) ENTON81TF Entamoeba histolytica Sheared DNA Entam... 34 4.2 2
(AZ688591) ENTFV23TF Entamoeba histolytica Sheared DNA Entam... 34 4.2 2
(EJ607521) 1092962018811 Global-Ocean-Sampling_GS-29-01-01-1... 42 4.3 2
(EJ812023) 1093017495040 Global-Ocean-Sampling_GS-30-02-01-1... 30 4.3 3
(AC152185) Medicago truncatula chromosome 2 clone mth2-97e5,... 38 4.5 4
(ES623447) NGPP991TR NGPP Nasonia giraulti cDNA, mRNA sequence. 32 4.5 2
(ES635001) NVPB150TR NVPA Nasonia vitripennis cDNA, mRNA seq... 32 4.5 2
(FE252350) CAPH3966.fwd CAPH Naegleria gruberi amoeba stage ... 32 4.5 2
(ES648187) NVPSD18TR NVPP Nasonia vitripennis cDNA, mRNA seq... 32 4.5 2
(GE426039) 294516129 Nasonia vitripennis Adult Male Nasonia ... 32 4.5 2
(FE252349) CAPH3966.rev CAPH Naegleria gruberi amoeba stage ... 32 4.5 2
(GE447561) 294581024 Nasonia vitripennis Adult Female Nasoni... 32 4.6 2
(GE464499) 294760306 Nasonia vitripennis Adult Female Nasoni... 32 4.6 2
(CU956462) Brassica napus GSS, clone JBnB182F02, end read, p... 32 4.6 2
(EJ902473) 1093018495644 Global-Ocean-Sampling_GS-30-02-01-1... 30 4.6 3
(AM180355) Clostridium difficile 630 complete genome. 38 5.0 17
(AC164043) Bos taurus clone CH240-138A20, WORKING DRAFT SEQU... 40 5.3 4
(EA481464) Sequence 1 from patent US 7344888. 38 5.7 3
(AC206160) Zea mays chromosome 4 clone CH201-311G22; ZMMBBc0... 38 5.7 3
(AF404509) Blueberry red ringspot virus, complete genome. 38 5.8 3
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont... 36 6.2 9
(AX356445) Sequence 79 from Patent WO0181622. 38 6.3 3
(CP001407) Bacillus cereus 03BB102, complete genome. 36 6.6 19
(FP101860) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 6.9 5
(CU468236) Zebrafish DNA sequence from clone CH73-62B13 in l... 44 6.9 1
(EF137484) Anthoxanthum odoratum voucher Chase19298 K matura... 44 6.9 1
(DQ786884) Anthoxanthum odoratum maturase K (matK) gene, com... 44 6.9 1
(AM234541) Anthoxanthum odoratum chloroplast matK gene for m... 44 6.9 1
(AF060753) Cardwellia sublimis chloroplast atpB-rbcL interge... 44 6.9 1
(AF060748) Gevuina bleasdalei chloroplast atpB-rbcL intergen... 44 6.9 1
(AF060745) Euplassa inaequalis chloroplast atpB-rbcL interge... 44 6.9 1
(AC189397) Brassica rapa subsp. pekinensis clone KBrB056C05,... 44 6.9 1
(DQ090774) Pterochthonius angelus heat shock protein 82 (hsp... 44 6.9 1
(EF444992) Homo sapiens laminin alpha-3 chain precursor (LAM... 44 6.9 1
(DQ498623) Homo sapiens clone EIAV 369 genomic sequence. 44 6.9 1
(AL137800) Human DNA sequence from clone RP1-127C7 on chromo... 44 6.9 1
(AC090366) Homo sapiens chromosome 18, clone RP11-666O22, co... 44 6.9 1
(AC087348) Homo sapiens chromosome 8, clone RP11-333H13, com... 44 6.9 1
(AC009800) Homo sapiens chromosome 8, clone RP11-182E14, com... 44 6.9 1
(AC152714) Bos taurus clone CH240-7C19, WORKING DRAFT SEQUEN... 44 6.9 1
(AC078987) Homo sapiens chromosome 3 clone RP11-322C16, WORK... 44 6.9 1
(AP001173) Homo sapiens genomic DNA, chromosome 18p11.2 clon... 44 6.9 1
(AC233243) Choloepus hoffmanni clone CH281-674L9, WORKING DR... 44 6.9 1
(AC231700) Choloepus hoffmanni clone CH281-417D20, WORKING D... 44 6.9 1
(AC198552) Saimiri boliviensis boliviensis clone CH254-69K7,... 44 6.9 1
(AC187933) Aotus nancymaae clone CH258-244M7, WORKING DRAFT ... 44 6.9 1
(AC179173) Strongylocentrotus purpuratus clone R3-4016J6, WO... 44 6.9 1
(AC023126) Homo sapiens chromosome 8 clone RP11-333H13, WORK... 44 6.9 1
(AQ515510) HS_5228_A1_D05_T7A RPCI-11 Human Male BAC Library... 44 6.9 1
(FH296466) CHO_OF4224xm24r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 6.9 1
(EK182026) 1095458127078 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.9 1
(EK153172) 1095456062348 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.9 1
(EJ692482) 1092956007644 Global-Ocean-Sampling_GS-30-02-01-1... 44 6.9 1
(EJ663266) 1092955032674 Global-Ocean-Sampling_GS-30-02-01-1... 44 6.9 1
(DU788291) APKH2551.b2 HF770_12-21-03 uncultured marine micr... 44 6.9 1
(CC097626) CSU-K34.104I11.T7 CSU-K34 Aedes aegypti genomic c... 44 6.9 1
(EH115934) EST0451 Torpedo californica electric organ Torped... 44 6.9 1
(EE888880) Sa_rcgd_15A15_M13R-29 Spiny dogfish shark rectal ... 44 6.9 1
(DW510955) GH_TMIRS_148_F02_R Cotton Normalized Library dT p... 44 6.9 1
(DV498335) Sa_em0_08i07_5prime Dogfish Shark Embryo-derived ... 44 6.9 1
(DT045122) Le_lv0_27e03_SP6 Little Skate Liver, Normalized L... 44 6.9 1
(DR784277) Le_lv0_26g10_SP6 Little Skate Liver, Normalized L... 44 6.9 1
(DR783715) Le_lv0_20e12_SP6 Little Skate Liver, Normalized L... 44 6.9 1
(CN854318) Ha_mx0_23f05_SP6 Lobster Multiple Tissues, Normal... 44 6.9 1
(CN573893) rc44g01.x1 Meloidogyne hapla egg pAMP1 v1 Meloido... 44 6.9 1
(BW230799) Ciona intestinalis cDNA, clone:cilv087h07, 5' end... 44 6.9 1
(AI133614) HA2235 Human fetal liver cDNA library Homo sapien... 44 6.9 1
(BE663457) 147236 MARC 4BOV Bos taurus cDNA 5', mRNA sequence. 44 6.9 1
(BE237310) 146456 MARC 4BOV Bos taurus cDNA 5', mRNA sequence. 44 6.9 1
(BE237305) 146449 MARC 4BOV Bos taurus cDNA 5', mRNA sequence. 44 6.9 1
(FE659912) HA_MX2_95d02_SP6 Lobster Multiple Tissues, Normal... 44 6.9 1
(FD769588) Zfi02b_67_A05_C017.b1 cDNA library derived from f... 44 6.9 1
(FD769445) Zfi02b_65_A05_C017.b1 cDNA library derived from f... 44 6.9 1
(EX162435) MW_DP0415 Dermatophagoides pteronyssinus cDNA lib... 44 6.9 1
(EW692852) Q2_Javad_1EPTO_75_E16_245.F_008 Torpedo californi... 44 6.9 1
(EW692591) Q2_Javad_1EPTO_70_G02_023.F_004 Torpedo californi... 44 6.9 1
(CP001146) Dictyoglomus thermophilum H-6-12, complete genome. 44 6.9 1
(CP000312) Clostridium perfringens SM101, complete genome. 44 6.9 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 44 6.9 1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 44 6.9 1
(AP010656) Candidatus Azobacteroides pseudotrichonymphae gen... 44 6.9 1
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)... 44 6.9 1
(CE020976) tigr-gss-dog-17000322023470 Dog Library Canis lup... 40 7.3 2
(AC189190) Brassica rapa subsp. pekinensis clone KBrB002G19,... 34 7.6 6
(Z71255) S.cerevisiae chromosome XVI 165536 bp sequence, cen... 36 7.6 4
(CU929724) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 7.7 5
(AC222620) Bos taurus clone CH240-444G5, WORKING DRAFT SEQUE... 34 8.5 5
(AC122638) Rattus norvegicus clone CH230-155N20, *** SEQUENC... 38 8.7 6
(EA266464) Sequence 685 from patent US 7241867. 36 8.8 9
(DD419616) GENES OF AN OTITIS MEDIA ISOLATE OF NONTYPEABLE H... 36 8.8 9
(CQ873072) Sequence 685 from Patent WO2004078949. 36 8.8 9
(AE017243) Mycoplasma hyopneumoniae J, complete genome. 32 8.8 15
(AP001677) Homo sapiens genomic DNA, chromosome 21q, section... 40 8.9 7
(AC021173) Homo sapiens chromosome 6 clone RP11-681P9, WORKI... 38 8.9 4
(AC207321) Zea mays chromosome 3 clone CH201-435P12; ZMMBBc0... 40 9.2 2
(AL591977) Listeria monocytogenes strain EGD, complete genom... 34 9.3 7
(CC550608) CH240_435D3.TARBAC13P2 CHORI-240 Bos taurus genom... 34 9.3 2
>(AU264880) Dictyostelium discoideum vegetative cDNA clone:VSF216,
5' end single read.
Length = 530
Score = 509 bits (257), Expect(3) = 0.0
Identities = 257/257 (100%)
Strand = Plus / Plus
Query: 274 tgatgtctggtgatatgacattagtatcagaattgggtggtgttcaattagcaattcaag 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgatgtctggtgatatgacattagtatcagaattgggtggtgttcaattagcaattcaag 333
Query: 334 cagcagtttcacaagcattcaaaacaccagaagttatcaaattatttgcaaagaaagatc 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cagcagtttcacaagcattcaaaacaccagaagttatcaaattatttgcaaagaaagatc 393
Query: 394 aaaattcattaagaactaaattaggtaacattcaaaggagatgttcaattaggtaaaatt 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aaaattcattaagaactaaattaggtaacattcaaaggagatgttcaattaggtaaaatt 453
Query: 454 tcaaaagatgcttatattgatcaatctgttgaaattttagctgctttaaagaaattagat 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tcaaaagatgcttatattgatcaatctgttgaaattttagctgctttaaagaaattagat 513
Query: 514 tttgttttatcaccaga 530
|||||||||||||||||
Sbjct: 514 tttgttttatcaccaga 530
Score = 375 bits (189), Expect(3) = 0.0
Identities = 189/189 (100%)
Strand = Plus / Plus
Query: 77 tccaataataatggcatcaagaggtaaaacagaaactaataaattaaaagttaatattga 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tccaataataatggcatcaagaggtaaaacagaaactaataaattaaaagttaatattga 136
Query: 137 agagcaattaaatagattattagcacaattacaagatattgaagaattaaaagaagatat 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agagcaattaaatagattattagcacaattacaagatattgaagaattaaaagaagatat 196
Query: 197 cacacaagaagaatatgatgaaactaaaaaagatacacttgaacaaatgaaagaatttga 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 cacacaagaagaatatgatgaaactaaaaaagatacacttgaacaaatgaaagaatttga 256
Query: 257 acaatcatt 265
|||||||||
Sbjct: 257 acaatcatt 265
Score = 50.1 bits (25), Expect(3) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cacaatcaagatcttctcaattttt 25
|||||||||||||||||||||||||
Sbjct: 1 cacaatcaagatcttctcaattttt 25
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 997,726,612
Number of extensions: 65115301
Number of successful extensions: 5410695
Number of sequences better than 10.0: 180
Length of query: 664
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 640
Effective length of database: 102,084,959,077
Effective search space: 65334373809280
Effective search space used: 65334373809280
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 8. 1 |
| Homology vs Protein |
Query= Contig-U05251-1 (Contig-U05251-1Q) /CSM_Contig/Contig-U05251-1Q.Seq.d
(664 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54ID4) RecName: Full=Protein LZIC; AltName: Full=Leucine zippe... 220 1e-93
BT079000_1(BT079000|pid:none) Esox lucius clone eluc-evq-514-298... 164 9e-53
DQ058007_1(DQ058007|pid:none) Danio rerio leucine zipper and ICA... 165 1e-51
(Q6DHH7) RecName: Full=Protein LZIC; AltName: Full=Leucine zippe... 164 2e-51
AK304348_1(AK304348|pid:none) Homo sapiens cDNA FLJ55829 complet... 161 6e-51
(Q8WZA0) RecName: Full=Protein LZIC; AltName: Full=Leucine zippe... 161 6e-51
(Q5PQN7) RecName: Full=Protein LZIC; AltName: Full=Leucine zippe... 160 2e-50
(Q8K3C3) RecName: Full=Protein LZIC; AltName: Full=Leucine zippe... 161 7e-50
BT046259_1(BT046259|pid:none) Salmo salar clone ssal-eve-569-130... 162 9e-50
(Q5ZKW2) RecName: Full=Protein LZIC; AltName: Full=Leucine zippe... 157 2e-49
AJ784432_1(AJ784432|pid:none) Suberites domuncula mRNA for leuci... 149 3e-49
CS300634_1(CS300634|pid:none) Sequence 142 from Patent EP1661986. 161 6e-49
BC103024_1(BC103024|pid:none) Bos taurus leucine zipper and CTNN... 156 2e-48
CP000584_386(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 94 1e-23
CR548612_220(CR548612|pid:none) Paramecium tetraurelia macronucl... 79 9e-14
BC151733_1(BC151733|pid:none) Bos taurus leucine zipper and CTNN... 70 4e-11
(Q2KIQ2) RecName: Full=Meiosis-specific nuclear structural prote... 42 0.016
AB046866_1(AB046866|pid:none) Danio rerio ICAT mRNA for beta-cat... 42 0.021
(P12844) RecName: Full=Myosin-3; AltName: Full=Myosin heavy chai... 40 0.080
S02771(T23622;S02771)myosin heavy chain A [similarity] - Caenorh... 40 0.080
AK057542_1(AK057542|pid:none) Homo sapiens cDNA FLJ32980 fis, cl... 39 0.11
BC031046_1(BC031046|pid:none) Homo sapiens meiosis-specific nucl... 39 0.11
BC107721_1(BC107721|pid:none) Homo sapiens centrosomal protein 1... 39 0.11
BC034991_1(BC034991|pid:none) Homo sapiens meiosis-specific nucl... 39 0.11
(Q8NEH6) RecName: Full=Meiosis-specific nuclear structural prote... 39 0.11
AB020719_1(AB020719|pid:none) Homo sapiens KIAA0912 mRNA for KIA... 39 0.11
EU176292_1(EU176292|pid:none) Synthetic construct Homo sapiens c... 39 0.11
(O94986) RecName: Full=Centrosomal protein of 152 kDa; ... 39 0.11
CP000771_697(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 39 0.14
(O67622) RecName: Full=2',3'-cyclic-nucleotide 2'-phosphodiester... 39 0.18
CP000261_1151(CP000261|pid:none) Streptococcus pyogenes MGAS2096... 39 0.18
CP001291_4282(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 39 0.18
AE017341_78(AE017341|pid:none) Cryptococcus neoformans var. neof... 38 0.23
CP000724_3821(CP000724|pid:none) Alkaliphilus metalliredigens QY... 38 0.23
AB168724_1(AB168724|pid:none) Macaca fascicularis testis cDNA, c... 38 0.23
(Q4R7T8) RecName: Full=Meiosis-specific nuclear structural prote... 38 0.23
CP001407_472(CP001407|pid:none) Bacillus cereus 03BB102, complet... 38 0.23
AF116523_1(AF116523|pid:none) Mus musculus periplakin (ppl) gene... 37 0.40
CP000903_464(CP000903|pid:none) Bacillus weihenstephanensis KBAB... 37 0.40
CP001283_541(CP001283|pid:none) Bacillus cereus AH820, complete ... 37 0.40
FM992692_166(FM992692|pid:none) Candida dubliniensis CD36 chromo... 37 0.52
CT005272_620(CT005272|pid:none) Leishmania major strain Friedlin... 37 0.68
(Q9R269) RecName: Full=Periplakin; &AF126834_1(AF126834|pid:non... 37 0.68
(Q86Z98) RecName: Full=Kinesin heavy chain; &AY230438_1(AY23043... 36 0.89
(P46872) RecName: Full=Kinesin-II 85 kDa subunit; AltName: Full=... 36 0.89
CP001245_15(CP001245|pid:none) Borrelia afzelii ACA-1 plasmid lp... 36 1.2
AY318871_160(AY318871|pid:none) Canarypox virus strain ATCC VR-1... 35 1.5
CT010477_1(CT010477|pid:none) Mouse DNA sequence from clone RP23... 35 1.5
AM494957_121(AM494957|pid:none) Leishmania braziliensis chromoso... 35 1.5
AM502237_74(AM502237|pid:none) Leishmania infantum chromosome 19. 35 1.5
(Q5IR70) RecName: Full=Cancer-associated gene 1 protein homolog;... 35 1.5
CR382124_680(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 35 1.5
CP001279_657(CP001279|pid:none) Nautilia profundicola AmH, compl... 35 2.0
AF533700_1(AF533700|pid:none) Plasmodium falciparum 3D7 normocyt... 35 2.6
CP001034_1506(CP001034|pid:none) Natranaerobius thermophilus JW/... 35 2.6
BA000001_577(BA000001|pid:none) Pyrococcus horikoshii OT3 DNA, c... 35 2.6
AF411932_1(AF411932|pid:none) Plasmodium falciparum strain Malay... 35 2.6
AF411929_1(AF411929|pid:none) Plasmodium falciparum strain FVO n... 35 2.6
AL844503_21(AL844503|pid:none) Plasmodium falciparum 3D7 chromos... 35 2.6
CP001047_113(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 35 2.6
CP001311_11(CP001311|pid:none) Borrelia garinii PBr plasmid PBr_... 35 2.6
CP001047_167(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, ... 34 3.4
CP000890_1321(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 34 3.4
BC167970_1(BC167970|pid:none) Danio rerio wu:fc88b11, mRNA (cDNA... 34 3.4
JH0381(JH0381;S16455)phosphoenolpyruvate carboxylase (EC 4.1.1.3... 34 3.4
CP000847_49(CP000847|pid:none) Rickettsia akari str. Hartford, c... 34 3.4
(Q5XHF3) RecName: Full=Phosphatase and actin regulator 4-B; &BC... 34 3.4
T51932(T51932) kinesin [imported] - Haematonectria haematococca ... 34 3.4
CP001019_582(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 34 3.4
X72090_1(X72090|pid:none) S.pyogenes emm55 gene for M-protein. 34 3.4
AB220160_1(AB220160|pid:none) Tetrahymena thermophila BNI1 mRNA ... 34 4.4
AL162272_2(AL162272|pid:none) Human DNA sequence from clone RP11... 34 4.4
(A3DIM5) RecName: Full=ATP synthase subunit b; AltName: Full=ATP... 34 4.4
AK032912_1(AK032912|pid:none) Mus musculus 12 days embryo male w... 34 4.4
(Q9UPS8) RecName: Full=Ankyrin repeat domain-containing protein ... 34 4.4
CP001291_2728(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 34 4.4
CP000685_4583(CP000685|pid:none) Flavobacterium johnsoniae UW101... 34 4.4
DQ522174_1(DQ522174|pid:none) Streptococcus pyogenes isolate SI0... 34 4.4
AM910983_16(AM910983|pid:none) Plasmodium knowlesi strain H chro... 34 4.4
(P61584) RecName: Full=Rho-associated protein kinase 1; ... 34 4.4
AE000511_318(AE000511|pid:none) Helicobacter pylori 26695, compl... 34 4.4
BC113114_1(BC113114|pid:none) Homo sapiens Rho-associated, coile... 34 4.4
DQ219988_1(DQ219988|pid:none) Lactobacillus reuteri putative pha... 34 4.4
BC130453_1(BC130453|pid:none) Homo sapiens ankyrin repeat domain... 34 4.4
CT005258_99(CT005258|pid:none) Leishmania major strain Friedlin,... 34 4.4
(Q7M6Z4) RecName: Full=Kinesin-like protein KIF27; 34 4.4
AM502254_652(AM502254|pid:none) Leishmania infantum chromosome 36. 34 4.4
(Q13464) RecName: Full=Rho-associated protein kinase 1; ... 34 4.4
AY954964_6(AY954964|pid:none) Bacteriophage 29, complete genome.... 34 4.4
AE001362_157(AE001362|pid:none) Plasmodium falciparum 3D7 chromo... 33 5.8
CP000141_1345(CP000141|pid:none) Carboxydothermus hydrogenoforma... 33 5.8
(Q01241) RecName: Full=70 kDa neurofilament protein; AltName: Fu... 33 5.8
T21174(T21174;T25113)hypothetical protein F20G4.3 - Caenorhabdit... 33 5.8
AL021811_17(AL021811|pid:none) Arabidopsis thaliana DNA chromoso... 33 5.8
CP001132_2240(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 33 5.8
AY297781_14(AY297781|pid:none) Alcaligenes faecalis strain NCIB ... 33 5.8
(Q8IIG7) RecName: Full=Uncharacterized protein PF11_0207; &AE01... 33 5.8
CP001081_150(CP001081|pid:none) Clostridium botulinum Ba4 str. 6... 33 5.8
BA000028_2491(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 33 5.8
(Q8N8E3) RecName: Full=Coiled-coil domain-containing protein 46; 33 5.8
(Q5HZA1) RecName: Full=Phosphatase and actin regulator 4-A; &BC... 33 5.8
E71606(E71606)hypothetical protein PFB0765w - malaria parasite (... 33 5.8
AY544194_4(AY544194|pid:none) Mycoplasma arthritidis strain 158p... 33 5.8
U49263_1(U49263|pid:none) Caenorhabditis elegans non-muscle myos... 33 5.8
Z75538_4(Z75538|pid:none) Caenorhabditis elegans Cosmid F20G4, c... 33 5.8
AY150465_1(AY150465|pid:none) Arabidopsis thaliana unknown prote... 33 5.8
AY811047_1(AY811047|pid:none) Schistosoma japonicum SJCHGC04415 ... 33 7.5
L40358_1(L40358|pid:none) Arabidopsis thaliana calmodulin-bindin... 33 7.5
CP000879_1305(CP000879|pid:none) Petrotoga mobilis SJ95, complet... 33 7.5
AY544195_5(AY544195|pid:none) Mycoplasma arthritidis strain 1412... 33 7.5
(Q8BTT6) RecName: Full=Digestive organ expansion factor homolog; 33 7.5
BC047248_1(BC047248|pid:none) Xenopus laevis middle molecular we... 33 7.5
AB171284_1(AB171284|pid:none) Macaca fascicularis brain cDNA clo... 33 7.5
AB168737_1(AB168737|pid:none) Macaca fascicularis testis cDNA, c... 33 7.5
(P19600) RecName: Full=Heterogeneous nuclear ribonucleoprotein C... 33 7.5
U52064_1(U52064|pid:none) Kaposi's sarcoma-associated herpes-lik... 33 7.5
AF002678_1(AF002678|pid:none) Arabidopsis thaliana kinesin-like ... 33 7.5
CP000703_337(CP000703|pid:none) Staphylococcus aureus subsp. aur... 33 7.5
BA000026_344(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, c... 33 7.5
CP000568_659(CP000568|pid:none) Clostridium thermocellum ATCC 27... 33 7.5
CP000612_2747(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 33 7.5
U85969_1(U85969|pid:none) Xenopus laevis middle molecular weight... 33 7.5
CP001634_581(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, co... 33 7.5
BX842681_19(BX842681|pid:none) Neurospora crassa DNA linkage gro... 33 7.5
CP001146_1236(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 33 7.5
CP000866_647(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c... 33 7.5
AP009484_1036(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 33 7.5
AB170702_1(AB170702|pid:none) Macaca fascicularis brain cDNA clo... 33 7.5
AY063811_1(AY063811|pid:none) Arabidopsis thaliana putative kine... 33 7.5
AK088756_1(AK088756|pid:none) Mus musculus 2 days neonate thymus... 33 7.5
AB018108_10(AB018108|pid:none) Arabidopsis thaliana genomic DNA,... 33 7.5
BC074454_1(BC074454|pid:none) Xenopus laevis middle molecular we... 33 7.5
AY954966_7(AY954966|pid:none) Bacteriophage 88, complete genome.... 33 7.5
CP001261_4(CP001261|pid:none) Borrelia burgdorferi 156a plasmid ... 33 7.5
CP000439_460(CP000439|pid:none) Francisella tularensis subsp. no... 33 9.8
CP001146_1900(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 33 9.8
(Q802R9) RecName: Full=Structural maintenance of chromosomes pro... 33 9.8
CP000507_379(CP000507|pid:none) Shewanella amazonensis SB2B, com... 33 9.8
AL138650_3(AL138650|pid:none) Arabidopsis thaliana DNA chromosom... 33 9.8
AY567966_1(AY567966|pid:none) Arabidopsis thaliana structural ma... 33 9.8
CP001034_1917(CP001034|pid:none) Natranaerobius thermophilus JW/... 33 9.8
A57013(A57013;S44243) early endosome antigen 1 - human &L40157_... 33 9.8
AY237537_1(AY237537|pid:none) Homo sapiens KIF27B mRNA, complete... 33 9.8
AM778854_2(AM778854|pid:none) Microcystis aeruginosa PCC 7806 ge... 33 9.8
AM180355_3022(AM180355|pid:none) Clostridium difficile 630 compl... 33 9.8
AJ851728_1(AJ851728|pid:none) Gallus gallus mRNA for hypothetica... 33 9.8
AE016830_589(AE016830|pid:none) Enterococcus faecalis V583, comp... 33 9.8
(Q86VH2) RecName: Full=Kinesin-like protein KIF27; &AL354733_3(... 33 9.8
DQ119137_1(DQ119137|pid:none) Aplysia californica nonmuscle myos... 33 9.8
(Q15075) RecName: Full=Early endosome antigen 1; AltName: Full=E... 33 9.8
AL133654_1(AL133654|pid:none) Homo sapiens mRNA; cDNA DKFZp434D0... 33 9.8
CP000932_55(CP000932|pid:none) Campylobacter lari RM2100, comple... 33 9.8
(A0Q556) RecName: Full=Methionyl-tRNA synthetase; EC=6.... 33 9.8
CP000806_3293(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 33 9.8
(Q759G7) RecName: Full=Helicase SWR1; EC=3.6.1.-; &AE0... 33 9.8
CP000932_581(CP000932|pid:none) Campylobacter lari RM2100, compl... 33 9.8
>(Q54ID4) RecName: Full=Protein LZIC; AltName: Full=Leucine zipper
and ICAT homologous domain-containing protein; AltName:
Full=Leucine zipper and CTNNBIP1 domain-containing
protein;
Length = 192
Score = 220 bits (560), Expect(2) = 1e-93
Identities = 115/115 (100%), Positives = 115/115 (100%)
Frame = +3
Query: 87 MASRGKTETNKLKVNIEEQLNRLLAQLQDIEELKEDITQEEYDETKKDTLEQMKEFEQSL 266
MASRGKTETNKLKVNIEEQLNRLLAQLQDIEELKEDITQEEYDETKKDTLEQMKEFEQSL
Sbjct: 1 MASRGKTETNKLKVNIEEQLNRLLAQLQDIEELKEDITQEEYDETKKDTLEQMKEFEQSL 60
Query: 267 KKMMSGDMTLVSELGGVQLAIQAAVSQAFKTPEVIKLFAKKDQNSLRTKLGNIQR 431
KKMMSGDMTLVSELGGVQLAIQAAVSQAFKTPEVIKLFAKKDQNSLRTKLGNIQR
Sbjct: 61 KKMMSGDMTLVSELGGVQLAIQAAVSQAFKTPEVIKLFAKKDQNSLRTKLGNIQR 115
Score = 146 bits (369), Expect(2) = 1e-93
Identities = 77/77 (100%), Positives = 77/77 (100%)
Frame = +1
Query: 433 DVQLGKISKDAYIDQSVEILAALKKLDFVLSPEEEAFLEKHKSRSMSEFEKVSSNIGQGT 612
DVQLGKISKDAYIDQSVEILAALKKLDFVLSPEEEAFLEKHKSRSMSEFEKVSSNIGQGT
Sbjct: 116 DVQLGKISKDAYIDQSVEILAALKKLDFVLSPEEEAFLEKHKSRSMSEFEKVSSNIGQGT 175
Query: 613 KENILSSAASQIKNASK 663
KENILSSAASQIKNASK
Sbjct: 176 KENILSSAASQIKNASK 192
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 672,959,687
Number of extensions: 10709429
Number of successful extensions: 54502
Number of sequences better than 10.0: 156
Number of HSP's gapped: 54105
Number of HSP's successfully gapped: 178
Length of query: 221
Length of database: 1,061,185,681
Length adjustment: 124
Effective length of query: 97
Effective length of database: 655,898,129
Effective search space: 63622118513
Effective search space used: 63622118513
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
2 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |