Contig-U05205-1
Contig ID Contig-U05205-1
Contig update 2002. 9.13
Contig sequence
>Contig-U05205-1 (Contig-U05205-1Q) /CSM_Contig/Contig-U05205-1Q.Seq.d
AAAAAAAAAAAAAATTTTTATATAACCTTAGTACTATTTTTGTATAATAT
AATAACTATTATACACACCTGTAAATAATAAATCATAAATAATAAATAGT
AAATAAATAATAAAATAATAAAATAATATTAATAATAATAATAATAAATA
AAACTTTTTCATATATATATTAAAAGAAATTAAAAAATGTTTTTATTTGG
TAAACAAAAAACTCCAAAGGAGGTATTAAGAGAAAATCAAAGAAACTTAA
ATAAATCAATGAGAGAAATTGATCGTGAAAGAGTAGCTCTTCAGAATCAA
GAAAAAAAAATTATATTAGATATTAAGAAAATGGCTAAACAAGGTCAAAT
GAACTCTGCAAAAATTATGGCAAAAGATTTAGTTAGAACCAGATATCATA
TACAAAAGTTTTATGAAATGAAAACACAATTACAAGCTGTTAGTCTTAGA
ATCCAAACATTACAATCAACACAAGCAATGGCAGAAGCAATGAAAGGTGT
TACAAAAGCAATGATTACAATGAATAGACAAATGAATTTACCACAATTTA
CAAAGATTATGATGGAATTTGAACAACAATCAGATAAATAAAATGGATAT
GAAAGAGGAAATGATGAATGACACAATGGATCAAGTTATGGAACAAGATG
GTGAGGAAGAACAATCACAAGAAATTTTAAATCAAGTTTTGGATGAAATT
GGTATTGATTTGGCTTCACAATTAGTAGATGCACCAACTACTGTTGGTAC
CTCTGTAGCCTCAAAACATCAAGTTAATTCTGGTTAAATTTTTTTTTTTT
TTTTTTTGTATTATATTAGATATAAATTATTTATAAAAAAAAAAAAAAAC
TAAATTATATAAAAAAAAA

Gap no gap
Contig length 869
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 1543754
End point 1542885
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U05205
List of clone(s)

est1=SSK357F,1,523
est2=SSG236E,3,870
Translated Amino Acid sequence
kkkknfyitlvlflyniitiihtck**iinnk**innkiik*y******iklfhiyikrn
*KMFLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSA
KIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNL
PQFTKIMMEFEQQSDK*ngyergnde*hngssygtrw*grtitrnfkssfg*nwy*fgft
isrctnycwylcslktss*fwlnffffffvly*i*iiykkkkklnyikk


Translated Amino Acid sequence (All Frames)
Frame A:
kkkknfyitlvlflyniitiihtck**iinnk**innkiik*y******iklfhiyikrn
*KMFLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSA
KIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNL
PQFTKIMMEFEQQSDK*ngyergnde*hngssygtrw*grtitrnfkssfg*nwy*fgft
isrctnycwylcslktss*fwlnffffffvly*i*iiykkkkklnyikk


Frame B:
kkkkifi*p*yyfcii**llytpvnnks*iinsk*iik**nninnnnnk*nffiyilkei
kkcfylvnkklqrry*ekiket*inq*eklivke*lfrikkkkly*ilrkwlnkvk*tlq
klwqki*lepdiiyksfmk*khnykllvleskhynqhkqwqkq*kvlqkq*lq*idk*iy
hnlqrl*wnlnnnqinkmdmkeemmndtmdqvmeqdgeeeqsqeilnqvldeigidlasq
lvdapttvgtsvaskhqvnsg*iffffflyyiryklfikkkkn*ii*kk


Frame C:
kkkkflynlstifv*ynnyythl*iinhk**ivnk**nnkiiliiiiinktfsyiy*kkl
knvfiw*tknskggikrkskklk*inern*s*kssssesrkknyiry*eng*trsnelck
nygkrfs*nqisytkvl*nentitsc*s*npnitintsngrsnercyksndyne*tneft
tiykdydgi*ttir*ikwi*krk**mtqwiklwnkmvrknnhkkf*ikfwmklvliwlhn
**mhqlllvpl*pqniklilvkffffffciildinyl*kkkktklykkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05205-1 (Contig-U05205-1Q)
/CSM_Contig/Contig-U05205-1Q.Seq.d
(869 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05205-1 (Contig-U05205-1Q) /CSM_Contig/Conti... 1104 0.0
Contig-U10817-1 (Contig-U10817-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U12803-1 (Contig-U12803-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U10974-1 (Contig-U10974-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U13032-1 (Contig-U13032-1Q) /CSM_Contig/Conti... 36 0.061
Contig-U04536-1 (Contig-U04536-1Q) /CSM_Contig/Conti... 36 0.061
Contig-U01494-1 (Contig-U01494-1Q) /CSM_Contig/Conti... 36 0.061
Contig-U13411-1 (Contig-U13411-1Q) /CSM_Contig/Conti... 34 0.24
Contig-U12801-1 (Contig-U12801-1Q) /CSM_Contig/Conti... 34 0.24
Contig-U12715-1 (Contig-U12715-1Q) /CSM_Contig/Conti... 34 0.24

>Contig-U05205-1 (Contig-U05205-1Q) /CSM_Contig/Contig-U05205-1Q.Seq.d
Length = 869

Score = 1104 bits (557), Expect = 0.0
Identities = 575/584 (98%)
Strand = Plus / Plus


Query: 205 caaaaaactccaaaggaggtattaagagaaaatcaaagaaacttaaataaatcaatgaga 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 caaaaaactccaaaggaggtattaagagaaaatcaaagaaacttaaataaatcaatgaga 264


Query: 265 gaaattgatcgtgaaagagtagctcttcagaatcaagnnnnnnnnnttatattagatatt 324
||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 265 gaaattgatcgtgaaagagtagctcttcagaatcaagaaaaaaaaattatattagatatt 324


Query: 325 aagaaaatggctaaacaaggtcaaatgaactctgcaaaaattatggcaaaagatttagtt 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagaaaatggctaaacaaggtcaaatgaactctgcaaaaattatggcaaaagatttagtt 384


Query: 385 agaaccagatatcatatacaaaagttttatgaaatgaaaacacaattacaagctgttagt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agaaccagatatcatatacaaaagttttatgaaatgaaaacacaattacaagctgttagt 444


Query: 445 cttagaatccaaacattacaatcaacacaagcaatggcagaagcaatgaaaggtgttaca 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttagaatccaaacattacaatcaacacaagcaatggcagaagcaatgaaaggtgttaca 504


Query: 505 aaagcaatgattacaatgaatagacaaatgaatttaccacaatttacaaagattatgatg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagcaatgattacaatgaatagacaaatgaatttaccacaatttacaaagattatgatg 564


Query: 565 gaatttgaacaacaatcagataaataaaatggatatgaaagaggaaatgatgaatgacac 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaatttgaacaacaatcagataaataaaatggatatgaaagaggaaatgatgaatgacac 624


Query: 625 aatggatcaagttatggaacaagatggtgaggaagaacaatcacaagaaattttaaatca 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatggatcaagttatggaacaagatggtgaggaagaacaatcacaagaaattttaaatca 684


Query: 685 agttttggatgaaattggtattgatttggcttcacaattagtagatgcaccaactactgt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agttttggatgaaattggtattgatttggcttcacaattagtagatgcaccaactactgt 744


Query: 745 tggtacctctgtagcctcaaaacatcaagttaattctggttaaa 788
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tggtacctctgtagcctcaaaacatcaagttaattctggttaaa 788


Score = 61.9 bits (31), Expect = 1e-09
Identities = 31/31 (100%)
Strand = Plus / Plus


Query: 15 tttttatataaccttagtactatttttgtat 45
|||||||||||||||||||||||||||||||
Sbjct: 15 tttttatataaccttagtactatttttgtat 45


Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 808 gtattatattagatataaattatttat 834
|||||||||||||||||||||||||||
Sbjct: 808 gtattatattagatataaattatttat 834


>Contig-U10817-1 (Contig-U10817-1Q) /CSM_Contig/Contig-U10817-1Q.Seq.d
Length = 1969

Score = 40.1 bits (20), Expect = 0.004
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 641 gaacaagatggtgaggaagaacaa 664
|||||||||||||| |||||||||
Sbjct: 334 gaacaagatggtgaagaagaacaa 357


>Contig-U12803-1 (Contig-U12803-1Q) /CSM_Contig/Contig-U12803-1Q.Seq.d
Length = 2242

Score = 38.2 bits (19), Expect = 0.015
Identities = 28/31 (90%)
Strand = Plus / Plus


Query: 644 caagatggtgaggaagaacaatcacaagaaa 674
||||||| |||||||||||| |||||||||
Sbjct: 1075 caagatgaagaggaagaacaaccacaagaaa 1105


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8606
Number of Sequences: 6905
Number of extensions: 8606
Number of successful extensions: 837
Number of sequences better than 10.0: 82
length of query: 869
length of database: 5,674,871
effective HSP length: 16
effective length of query: 853
effective length of database: 5,564,391
effective search space: 4746425523
effective search space used: 4746425523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 7.13
Homology vs DNA
Query= Contig-U05205-1 (Contig-U05205-1Q) /CSM_Contig/Contig-U05205-1Q.Seq.d
(869 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C84820) Dictyostelium discoideum slug cDNA, clone SSG236. 496 0.0 3
(BW638978) Dugesia ryukyuensis mRNA, clone: Dr_sW_013_E17, 5... 82 2e-25 5
(BW640551) Dugesia ryukyuensis mRNA, clone: Dr_sW_018_J01, 5... 78 1e-22 4
(BQ087159) Cri_10_G17_SP6 Ceratopteris Spore Library Ceratop... 66 1e-21 3
(GO097206) CAFZ1076.fwd CAFZ Alvinella pompejana Incyte regu... 52 1e-17 3
(GO118280) CAGA18455.fwd CAGA Alvinella pompejana Normalized... 52 1e-17 3
(GO168905) CAGA43054.fwd CAGA Alvinella pompejana Normalized... 52 1e-17 3
(GO097205) CAFZ1076.rev CAFZ Alvinella pompejana Incyte regu... 52 1e-17 3
(GO107196) CAFZ7404.fwd CAFZ Alvinella pompejana Incyte regu... 52 1e-17 3
(GO118279) CAGA18455.rev CAGA Alvinella pompejana Normalized... 52 1e-17 3
(GO168904) CAGA43054.rev CAGA Alvinella pompejana Normalized... 52 1e-17 3
(EX924822) lb22e05.g1 Cycas ovule - normalized (NYBG) Cycas ... 80 2e-17 2
(CB091656) he94h09.g1 Cycad Leaf Library (NYBG) Cycas rumphi... 80 2e-17 2
(GO107195) CAFZ7404.rev CAFZ Alvinella pompejana Incyte regu... 52 2e-15 3
(BE238875) MD0531 Meloidogyne incognita J2 (#MD99-1) Meloido... 46 3e-15 4
(AU073137) Dictyostelium discoideum slug cDNA, clone SSG236. 62 6e-15 2
(CN777839) tad84h09.y2 Hydra EST Darmstadt I Hydra magnipapi... 56 7e-15 3
(FC579649) CAXP14083.fwd CAXP Lottia gigantea from head, foo... 46 9e-15 3
(FC674536) CAXX10074.fwd CAXX Lottia gigantea from male gona... 46 9e-15 3
(FC759819) CBBN11687.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 46 9e-15 3
(FC730452) CBBG6002.fwd CBBG Lottia gigantea 12,15,18h embry... 46 9e-15 3
(FC577986) CAXP1316.fwd CAXP Lottia gigantea from head, foot... 46 9e-15 3
(ES831143) UFL_328_01 Cotton fiber 0-10 day post anthesis Go... 84 2e-14 2
(DW511682) GH_TMIRS_155_H01_F Cotton Normalized Library dT p... 84 2e-14 2
(DN804295) G.hir-8-10 DAA bolls irrigated 95 8-10 DAA cotton... 84 2e-14 2
(FC688687) CAXX20215.fwd CAXX Lottia gigantea from male gona... 46 3e-14 3
(GH241306) EST_eluc_evq_1018728 elucevq mixed_tissue Esox lu... 46 5e-13 3
(DW092882) CLPY4161.b1_B10.ab1 CLP(XYZ) lettuce perennis Lac... 64 1e-12 3
(FE266223) CAZO4984.rev CAZO Naegleria gruberi Flagellate St... 44 9e-12 4
(DV849317) GH_LSL09F07.f GH_LSL Gossypium hirsutum cDNA clon... 84 1e-11 1
(DR461887) CM102B08 Cotton Lambda Zap Express Library Gossyp... 84 1e-11 1
(BQ412372) GA__Ed0057C02r Gossypium arboreum 7-10 dpa fiber ... 84 1e-11 1
(BP957567) Euphorbia tirucalli mRNA, clone: ETC097F12, 5' end. 84 1e-11 1
(BF278249) GA__Eb0032D06f Gossypium arboreum 7-10 dpa fiber ... 84 1e-11 1
(ES844251) UFL_108_72 Cotton fiber 0-10 day post anthesis Go... 84 1e-11 1
(FE266224) CAZO4984.fwd CAZO Naegleria gruberi Flagellate St... 44 1e-11 4
(FE265268) CAZO4379.rev CAZO Naegleria gruberi Flagellate St... 44 1e-11 4
(FE265269) CAZO4379.fwd CAZO Naegleria gruberi Flagellate St... 44 1e-11 4
(DC062441) Xenopus laevis NBRP cDNA clone:xlk154l15ex, 5' end. 50 4e-11 3
(CU430275) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 42 8e-11 4
(BJ031018) Xenopus laevis cDNA clone:XL005n07, 5' end, singl... 48 1e-10 3
(BX843534) RZPD Xenopus laevis cDNA clone IMAGp998F1010938 =... 48 1e-10 3
(BJ617204) Xenopus laevis cDNA clone:XL179n03, 5' end. 48 1e-10 3
(DY565931) AGENCOURT_69684144 NICHD_XGC_Emb10 Xenopus laevis... 48 2e-10 3
(BG409904) S10-5-F4 Stage 10+ Gastrula Library Xenopus laevi... 48 2e-10 3
(EG805445) EST_ssal_evd_53125 ssalevd thymus Salmo salar cDN... 44 2e-10 3
(DY556788) AGENCOURT_69632065 NICHD_XGC_Ov1 Xenopus laevis c... 48 2e-10 3
(DT055103) AGENCOURT_55716484 NICHD_XGC_FaBN Xenopus laevis ... 48 2e-10 3
(ES832573) UFL_376_37 Cotton fiber 0-10 day post anthesis Go... 80 2e-10 1
(DT080724) AGENCOURT_55788435 NICHD_XGC_FaBN Xenopus laevis ... 48 2e-10 3
(EG805456) EST_ssal_evd_53126 ssalevd thymus Salmo salar cDN... 44 2e-10 3
(GE791260) EST_ssal_rgf_866419 ssalrgf mixed_tissue full-len... 44 2e-10 3
(CD254282) AGENCOURT_14216040 NICHD_XGC_Eye1 Xenopus laevis ... 48 2e-10 3
(AM766594) Zostera marina EST, 5'-end sequence, meristematic... 74 2e-10 2
(BU901318) AGENCOURT_10184162 NICHD_XGC_Ov1 Xenopus laevis c... 48 2e-10 3
(EB467711) AGENCOURT_74400714 NICHD_XGC_limb_m Xenopus laevi... 48 2e-10 3
(EE299531) AGENCOURT_86401794 NICHD_XGC_bone Xenopus laevis ... 48 2e-10 3
(CA788317) AGENCOURT_11030779 NICHD_XGC_OO1 Xenopus laevis c... 48 3e-10 3
(BT057370) Salmo salar clone ssal-evd-571-229 Charged multiv... 44 3e-10 3
(BC072066) Xenopus laevis hypothetical protein MGC78953, mRN... 48 5e-10 3
(BC106618) Xenopus laevis hypothetical protein MGC78953, mRN... 48 5e-10 3
(EG817060) EST_ssal_evd_19333 ssalevd thymus Salmo salar cDN... 44 6e-10 3
(FD947523) RS2GN90TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 78 7e-10 1
(FD943455) RS2GN90JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 78 7e-10 1
(FD571985) RS2FX04TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 78 7e-10 1
(EY946014) RS3CZ16TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 78 7e-10 1
(EW729492) RS2B853JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 78 7e-10 1
(EW725921) RS2B853TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 78 7e-10 1
(EG817059) EST_ssal_evd_19332 ssalevd thymus Salmo salar cDN... 44 7e-10 3
(FD454972) EGGAY53TR Haematobia irritans eggs Haematobia irr... 52 9e-10 2
(FD454971) EGGAY53TF Haematobia irritans eggs Haematobia irr... 52 9e-10 2
(BG736741) rk61g02.y1 Meloidogyne javanica egg pAMP1 v6 Chia... 46 1e-09 3
(DY710750) EST_ssal_rgb2_66489 ssalrgb2 mixed_tissue Salmo s... 56 1e-09 3
(EX163567) LY_YIT_DP1679 Dermatophagoides pteronyssinus cDNA... 44 1e-09 4
(CK877090) SGP138384 Atlantic salmon Eye cDNA library Salmo ... 56 1e-09 3
(BT059374) Salmo salar clone ssal-rgf-534-019 Charged multiv... 44 1e-09 3
(EG758882) EST_ssal_sjb_7399 ssalsjb mixed_tissue Salmo sala... 56 2e-09 3
(CX250856) 1303135 NCCCWA 02RT Oncorhynchus mykiss cDNA clon... 56 2e-09 3
(EG851221) EST_ssal_eve_8491 ssaleve thyroid Salmo salar cDN... 56 2e-09 3
(EG862170) EST_ssal_eve_55244 ssaleve thyroid Salmo salar cD... 56 2e-09 3
(EG893487) EST_ssal_evf_51040 ssalevf mixed_tissue Salmo sal... 56 2e-09 3
(EG942446) EST_ssal_evf_25770 ssalevf mixed_tissue Salmo sal... 56 3e-09 3
(FH258883) CHO_OF3365xd09r1.ab1 CHO_OF3 Nicotiana tabacum ge... 76 3e-09 1
(EH624435) CHO_SL001xe15f1.ab1 CHO_SL Nicotiana tabacum cDNA... 76 3e-09 1
(DY395317) PES913 Petunia embryosac SMART cDNA library Petun... 76 3e-09 1
(AM792103) Nicotiana tabacum EST, clone nt005174055. 76 3e-09 1
(AM781848) Nicotiana tabacum EST, clone nt005250053. 76 3e-09 1
(FG643183) TT-40_N08 K326 early senescent leaf library Nicot... 76 3e-09 1
(FG190634) AGN_PNL216cr1_b9.trimmed.seq AGN_PNL Nicotiana ta... 76 3e-09 1
(FG190544) AGN_PNL216cf1_b9.trimmed.seq AGN_PNL Nicotiana ta... 76 3e-09 1
(FG157152) AGN_RNC026xg20r1.ab1 AGN_RNC Nicotiana tabacum cD... 76 3e-09 1
(FD967888) RR2GJ48JQB RR2(MS) Raphanus raphanistrum subsp. r... 76 3e-09 1
(EX534290) NBT105_2007-07-13/NBT105_G01_002_1 Nicotiana bent... 76 3e-09 1
(EX534099) NBT102_2007-07-10/NBT102_D08_029_1 Nicotiana bent... 76 3e-09 1
(EX533835) NBT098_2007-07-12/NBT098_C04_014_1 Nicotiana bent... 76 3e-09 1
(EX533664) NBT095_2007-07-03/NBT095_F07_027_1 Nicotiana bent... 76 3e-09 1
(EX533600) NBT094_2007-07-10/NBT094_B07_031_1 Nicotiana bent... 76 3e-09 1
(EX533543) NBT093_2007-07-03/NBT093_B12_047_1 Nicotiana bent... 76 3e-09 1
(EX533526) NBT092_2007-07-10/NBT092_H12_041_1 Nicotiana bent... 76 3e-09 1
(EX168419) E05_R-18_036 Cotton 1-14 day post anthesis Lambda... 76 3e-09 1
(EX166777) D05_P-28_043 Cotton 1-14 day post anthesis Lambda... 76 3e-09 1
(ES889583) NBT113_2007-04-27/NBT113_D09_037_1 Nicotiana bent... 76 3e-09 1
(ES888652) NBT077_2007-05-04/NBT077_D09_037_1 Nicotiana bent... 76 3e-09 1
(ES886318) NBT033_2005-09-16_1/NBT033_G04_1 Nicotiana bentha... 76 3e-09 1
(ES885217) NBT016_2005-09-08_1/NBT016D01_1 Nicotiana bentham... 76 3e-09 1
(ES820055) UFL_336_06 Cotton fiber 0-10 day post anthesis Go... 76 3e-09 1
(ES816145) UFL_156_94 Cotton fiber 0-10 day post anthesis Go... 76 3e-09 1
(EG870503) EST_ssal_eve_31645 ssaleve thyroid Salmo salar cD... 56 3e-09 3
(EG790991) EST_ssal_evd_11211 ssalevd thymus Salmo salar cDN... 56 3e-09 3
(CR371125) AGENAE Rainbow trout normalized testis library (t... 56 3e-09 3
(EG778079) EST_ssal_evd_2063 ssalevd thymus Salmo salar cDNA... 56 3e-09 3
(DW562709) EST_ssal_rgb2_27128 rgb2 Salmo salar cDNA clone s... 56 3e-09 3
(DN302199) PL04025A1B07 cDNA from sexually mature hermaphodi... 62 3e-09 2
(GE828444) EST_omyk_evn_821448 omykevn RBC Oncorhynchus myki... 56 3e-09 3
(GE827731) EST_omyk_evn_817897 omykevn RBC Oncorhynchus myki... 56 3e-09 3
(GE833865) EST_omyk_evo_815024 omykevo WBC Oncorhynchus myki... 56 3e-09 3
(CU439398) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 42 3e-09 4
(GD178798) EST05007 Watermelon fruit normalization and subtr... 64 3e-09 2
(DN305400) PL05008A2H10 cDNA from sexually mature hermaphodi... 62 3e-09 2
(DN296665) PL04006B2D06 cDNA from sexually mature hermaphodi... 62 4e-09 2
(BG736315) rk54g02.y1 Meloidogyne javanica egg pAMP1 v6 Chia... 46 4e-09 3
(GD179575) EST05784 Watermelon fruit normalization and subtr... 64 4e-09 2
(FK758356) av02131e10r1.1 Symbiotic sea anemone (Anemonia vi... 38 7e-09 4
(EE000082) ROE00011310 Rhizopus oryzae Company Rhizopus oryz... 54 8e-09 2
(FK729955) av01023i17r1.1 Symbiotic sea anemone (Anemonia vi... 38 1e-08 4
(BT057090) Salmo salar clone ssal-eve-540-341 Charged multiv... 56 1e-08 3
(DV139135) CV03121B2G10.f1 CV03-normalized library Euphorbia... 74 1e-08 1
(DK960771) Adiantum capillus-veneris mRNA, clone: TST39A01NG... 74 1e-08 1
(BT073784) Oncorhynchus mykiss clone omyk-evo-505-080 Charge... 56 1e-08 3
(FK744942) av02063f01r1.1 Symbiotic sea anemone (Anemonia vi... 38 1e-08 4
(FK726627) av01045a04r1.1 Symbiotic sea anemone (Anemonia vi... 38 1e-08 4
(BP679247) Xenopus laevis NBRP cDNA clone:XL431e19ex, 5' end. 42 2e-08 4
(BJ033247) Xenopus laevis cDNA clone:XL020d03, 5' end, singl... 42 2e-08 4
(BW642897) Dugesia ryukyuensis mRNA, clone: Dr_sW_025_M13, 5... 42 2e-08 4
(DC128114) Xenopus laevis NBRP cDNA clone:xl317b01, 5' end. 42 2e-08 4
(DC122169) Xenopus laevis NBRP cDNA clone:xl296p09, 5' end. 42 2e-08 4
(BQ987866) QGF13G08.yg.ab1 QG_EFGHJ lettuce serriola Lactuca... 56 2e-08 3
(BJ626999) Xenopus laevis cDNA clone:XL216k16, 5' end. 42 2e-08 4
(DC116084) Xenopus laevis NBRP cDNA clone:xl274n21, 5' end. 42 3e-08 4
(DC109852) Xenopus laevis NBRP cDNA clone:xl253j18, 5' end. 42 3e-08 4
(DC106200) Xenopus laevis NBRP cDNA clone:xl241i20, 5' end. 42 3e-08 4
(DC103034) Xenopus laevis NBRP cDNA clone:xl231d11, 5' end. 42 3e-08 4
(CK800253) AGENCOURT_18791588 NICHD_XGC_Te2N Xenopus laevis ... 42 3e-08 4
(DC106041) Xenopus laevis NBRP cDNA clone:xl241a09, 5' end. 42 3e-08 4
(DC071728) Xenopus laevis NBRP cDNA clone:rxl241a09, 3' end. 42 3e-08 4
(DC068928) Xenopus laevis NBRP cDNA clone:rxl231d11, 3' end. 42 3e-08 4
(DY984034) CLSS6623.b1_M23.ab1 CLS(LMS) lettuce sativa Lactu... 56 4e-08 3
(DW127842) CLSX4377.b1_B15.ab1 CLS(XYZ) lettuce sativa Lactu... 56 4e-08 3
(DW112530) CLRX9454.b1_K12.ab1 CLR(XYZ) lettuce serriola Lac... 56 4e-08 3
(DW118718) CLRY7341.b1_I11.ab1 CLR(XYZ) lettuce serriola Lac... 56 5e-08 3
(EH042641) AS1RN25P1A03.ab1 Healthy Roots (RN) Arachis steno... 60 5e-08 3
(FC216769) CAGF4034.fwd CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC276006) CAGN21895.fwd CAGN Nematostella vectensis Nemve m... 42 7e-08 3
(FC225244) CAGF8477.fwd CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC219789) CAGF5576.fwd CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC258536) CAGN11577.fwd CAGN Nematostella vectensis Nemve m... 42 7e-08 3
(FC216768) CAGF4034.rev CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC278698) CAGN23332.fwd CAGN Nematostella vectensis Nemve m... 42 7e-08 3
(FC260279) CAGN12840.fwd CAGN Nematostella vectensis Nemve m... 42 7e-08 3
(FC214159) CAGF2538.fwd CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC277090) CAGN22480.fwd CAGN Nematostella vectensis Nemve m... 42 7e-08 3
(FC273994) CAGN20783.fwd CAGN Nematostella vectensis Nemve m... 42 7e-08 3
(FC220970) CAGF6182.fwd CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC230631) CAGG3275.fwd CAGG Nematostella vectensis Nemve Ea... 42 7e-08 3
(DV085643) 327-384-17_E24_T7 Nematostella vectensis normaliz... 42 7e-08 3
(FC221675) CAGF6554.fwd CAGF Nematostella vectensis Nemve Ea... 42 7e-08 3
(FC237724) CAGH11902.fwd CAGH Nematostella vectensis Nemve L... 42 7e-08 3
(EE124307) 1X18 Peanut (Luhua14) seeds full length cDNA Libr... 60 1e-07 3
(DB836234) Nilaparvata lugens mRNA, EST clone:NLTA1848, 5' e... 62 1e-07 2
(EG530126) 1X18T7 Peanut (Luhua14) seeds full length cDNA Li... 60 1e-07 3
(DY740184) EST_ssal_rgb2_95923 ssalrgb2 mixed_tissue Salmo s... 56 2e-07 3
(CO845073) LM_GM5_002663 Locusta migratoria gregarious phase... 58 2e-07 2
(EH048152) AS1RN17P1C07.ab1 Healthy Roots (RN) Arachis steno... 60 2e-07 3
(FL666824) Embrapa_Musa_ABB_Stressed_Cachaco_FA28TF Embrapa_... 70 2e-07 1
(FF561053) MUSR611TF MUSR Musa acuminata cDNA 5', mRNA seque... 70 2e-07 1
(FF560708) MUSRE17TF MUSR Musa acuminata cDNA 5', mRNA seque... 70 2e-07 1
(FD941688) RS1H403TF RS1(AR) Raphanus sativus var. oleiformi... 70 2e-07 1
(FD581568) RS3EN47JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ... 70 2e-07 1
(FD577221) RS3EN47TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 70 2e-07 1
(FD561543) RS1EP32TF RS1(AR) Raphanus sativus var. oleiformi... 70 2e-07 1
(FD556295) RR4EJ58TF RR4(PB) Raphanus raphanistrum subsp. la... 70 2e-07 1
(FD540280) RR2EJ36TF RR2(MS) Raphanus raphanistrum subsp. ra... 70 2e-07 1
(FD536814) RR2EJ36JQ RR2(MS) Raphanus raphanistrum subsp. ra... 70 2e-07 1
(EX906037) RS3CR89TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 70 2e-07 1
(EW717963) RS1B765TF RS1(AR) Raphanus sativus var. oleiformi... 70 2e-07 1
(CN515104) 3076.1 Tuber Skin Solanum tuberosum cDNA clone 30... 68 2e-07 2
(GO339645) VBL6_60_A18_E001.g1 Normalized cDNA library from ... 60 2e-07 3
(EL361468) CCEM6092.b1_H12.ab1 CCE(LMS) endive Cichorium end... 64 2e-07 2
(EH680176) CCIL5070.b1_K19.ab1 CCI(LMS) chicory Cichorium in... 64 2e-07 2
(ES653274) Hops-CTAB13_2007-03-28/Hops-CTAB13_G10_034_1 Humu... 60 2e-07 2
(EL362662) CCEM7185.b1_A22.ab1 CCE(LMS) endive Cichorium end... 64 2e-07 2
(EH705872) CCIS5032.b1_O09.ab1 CCI(LMS) chicory Cichorium in... 64 2e-07 2
(EH689139) CCIM13742.b1_L04.ab1 CCI(LMS) chicory Cichorium i... 64 2e-07 2
(EL367089) CCES3211.b1_F11.ab1 CCE(LMS) endive Cichorium end... 64 2e-07 2
(EL360604) CCEM5301.b1_J06.ab1 CCE(LMS) endive Cichorium end... 64 2e-07 2
(AV954792) Ciona intestinalis cDNA, clone:cicl08e01, 5' end,... 48 3e-07 3
(AV974618) Ciona intestinalis cDNA, clone:cieg35h11, 5' end,... 48 3e-07 3
(FK182155) XABT199805.b1 Gateway compatible cien cDNA librar... 48 3e-07 3
(BW216290) Ciona intestinalis cDNA, clone:cieg082h19, 5' end... 48 3e-07 3
(BW245733) Ciona intestinalis cDNA, clone:citb068j21, 5' end... 48 3e-07 3
(FF697438) XABT107812.fwd Gateway compatible cien cDNA libra... 48 3e-07 3
(BW247596) Ciona intestinalis cDNA, clone:citb075e12, 5' end... 48 3e-07 3
(FK195478) XABT208063.b1 Gateway compatible cien cDNA librar... 48 3e-07 3
(FK215528) XABT220561.b1 Gateway compatible cien cDNA librar... 48 4e-07 3
(AV674247) Ciona intestinalis cDNA clone:citb14p16 : 5' end,... 48 4e-07 3
(FF686188) XABT100450.fwd Gateway compatible cien cDNA libra... 48 4e-07 3
(EG862431) EST_ssal_eve_48766 ssaleve thyroid Salmo salar cD... 48 4e-07 3
(FF705966) XABT27485.fwd Gateway compatible cien cDNA librar... 48 5e-07 3
(GO920704) CMRMEa0003E13f CMRMEa Castanea mollissima cDNA, m... 52 5e-07 3
(DY833634) CTOY9561.b1_B16.ab1 CTO(XYZ) dandelion Taraxacum ... 44 5e-07 3
(EG868790) EST_ssal_eve_30103 ssaleve thyroid Salmo salar cD... 48 5e-07 3
(EG877393) EST_ssal_eve_21014 ssaleve thyroid Salmo salar cD... 56 6e-07 3
(AC210358) Solanum lycopersicum chromosome 7 clone C07HBa016... 68 6e-07 1
(AK321880) Solanum lycopersicum cDNA, clone: LEFL1030DC08, H... 68 6e-07 1
(AK246604) Solanum lycopersicum cDNA, clone: FC16CD05, HTC i... 68 6e-07 1
(FI737392) BOT01-84B5TR BOT01 Brassica oleracea genomic clon... 68 6e-07 1
(ES265761) 44JK5DM_UP_005_C09_25MAY2004_075 44JK5DM Brassica... 68 6e-07 1
(EL589782) 65JKBNM0_T3_037_B04_18MAR2005_030 65JKBNM0 Brassi... 68 6e-07 1
(EH426278) OL7542R Brassica oleracea var. alboglabra leaf cD... 68 6e-07 1
(EH421241) OL4858R Brassica oleracea var. alboglabra leaf cD... 68 6e-07 1
(EH421238) OL4858F Brassica oleracea var. alboglabra leaf cD... 68 6e-07 1
(EE556529) BNZB_RP_003_F01_22APR2004_005 Brassica napus BNZB... 68 6e-07 1
(EE476628) BNYS4DCT_UP_006_H02_19MAR2005_002 Brassica napus ... 68 6e-07 1
(DV673557) CGN-9673 Pericarp Coffea canephora cDNA clone ccc... 68 6e-07 1
(DV665942) CGN-3625 Cherry of Early Development Stage Coffea... 68 6e-07 1
(DV623700) 93162.1 Cold Sweetening C Solanum tuberosum cDNA ... 68 6e-07 1
(DR035643) 19612.2 Swollen Stolon Solanum tuberosum cDNA clo... 68 6e-07 1
(DB726608) Solanum lycopersicum cDNA, clone: LEFL2052O10, 5'... 68 6e-07 1
(DB712090) Solanum lycopersicum cDNA, clone: LEFL2010B21, 5'... 68 6e-07 1
(DB687706) Solanum lycopersicum cDNA, clone: LEFL1030DC08, 5... 68 6e-07 1
(CV966881) PC014B09 infected tomato, center of lesion 3 dpi ... 68 6e-07 1
(CV502698) 69107.1 Mixed Floral Solanum tuberosum cDNA clone... 68 6e-07 1
(CU578338) Theobroma cacao, mRNA sequence (KZ0AB7YI16FM1). 68 6e-07 1
(CU519641) Theobroma cacao, mRNA sequence (KZ0ABH6YH14FM1). 68 6e-07 1
(CK863183) 34401 In vitro Root Solanum tuberosum cDNA, mRNA ... 68 6e-07 1
(CK719398) 19612 Swollen Stolon Solanum tuberosum cDNA, mRNA... 68 6e-07 1
(AI781113) EST261992 tomato susceptible, Cornell Solanum lyc... 68 6e-07 1
(AI780614) EST261589 tomato susceptible, Cornell Solanum lyc... 68 6e-07 1
(AI774548) EST255648 tomato resistant, Cornell Solanum lycop... 68 6e-07 1
(AI485484) EST243805 tomato ovary, TAMU Solanum lycopersicum... 68 6e-07 1
(BW689771) Solanum lycopersicum cDNA, clone: FC16CD05, 5' en... 68 6e-07 1
(BP901528) Solanum lycopersicum cDNA, clone: LA26AG08, 5' en... 68 6e-07 1
(BP896812) Solanum lycopersicum cDNA, clone: LA11CG12, 5' en... 68 6e-07 1
(BP877172) Solanum lycopersicum cDNA, clone: FA07BE08, 5' en... 68 6e-07 1
(BI919320) EST539255 P. infestans-challenged potato leaf, co... 68 6e-07 1
(BI434663) EST537424 P. infestans-challenged potato leaf, co... 68 6e-07 1
(BG135155) EST468047 tomato crown gall Solanum lycopersicum ... 68 6e-07 1
(BF096915) EST360943 tomato nutrient deficient roots Solanum... 68 6e-07 1
(BF096802) EST360817 tomato nutrient deficient roots Solanum... 68 6e-07 1
(BE458592) EST413884 tomato developing/immature green fruit ... 68 6e-07 1
(BE434773) EST405851 tomato breaker fruit, TIGR Solanum lyco... 68 6e-07 1
(BE434749) EST405827 tomato breaker fruit, TIGR Solanum lyco... 68 6e-07 1
(FS199705) Solanum lycopersicum cDNA, clone: LEFL3140C14, 5'... 68 6e-07 1
(FS196938) Solanum lycopersicum cDNA, clone: LEFL3125B21, 5'... 68 6e-07 1
(FS191665) Solanum lycopersicum cDNA, clone: LEFL3076A07, 5'... 68 6e-07 1
(FG646177) CSRLCD001_06-F01-pAL17d Healthy leaf tissue Solan... 68 6e-07 1
(FG566662) BN18DYSC_UP_161_D12_2APR2008_090 BN18DYSC Brassic... 68 6e-07 1
(FD973552) RR2H291TF RR2(MS) Raphanus raphanistrum subsp. ra... 68 6e-07 1
(FD969223) RR2H291JQ RR2(MS) Raphanus raphanistrum subsp. ra... 68 6e-07 1
(FD964990) RR1GW53TF RR1(CS) Raphanus raphanistrum subsp. ma... 68 6e-07 1
(FD574210) RS2FA91JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 68 6e-07 1
(FD573620) RS2F236JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 68 6e-07 1
(FD570145) RS2FA91TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 68 6e-07 1
(FD569406) RS2F236TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 68 6e-07 1
(FD550929) RR3FE03TF RR3(NY) Raphanus raphanistrum subsp. ra... 68 6e-07 1
(EX771264) RR4C119TF RR4(PB) Raphanus raphanistrum subsp. la... 68 6e-07 1
(EX771254) RR4C107TF RR4(PB) Raphanus raphanistrum subsp. la... 68 6e-07 1
(EV531208) RR1AR27JQ RR1(CS) Raphanus raphanistrum subsp. ma... 68 6e-07 1
(EV529705) RR1A505JQ RR1(CS) Raphanus raphanistrum subsp. ma... 68 6e-07 1
(EV224792) 0106718 Brassica napus Damaged cotyledons Brassic... 68 6e-07 1
(EV117687) 0122999 Brassica napus Root library Brassica napu... 68 6e-07 1
(EV078629) BNSCS4CT_UP_263_E02_26MAY2007_008 Brassica napus ... 68 6e-07 1
(AW223207) EST300018 tomato fruit red ripe, TAMU Solanum lyc... 68 6e-07 1
(CU433353) Clytia hemisphaerica 5-PRIME EST from clone SA0AA... 54 7e-07 2
(ES575063) FPS012.CR_C11 LSG10-01 Lymnaea stagnalis cDNA clo... 50 7e-07 2
(ES579759) FPS018.CR_N14 LSG10-01 Lymnaea stagnalis cDNA clo... 50 8e-07 2
(FG093179) s13dLA62G03RT010_529129 Lupinus albus L. (white l... 44 9e-07 3
(FM898477) Brachionus plicatilis EST 5' end, clone sb101P000... 46 1e-06 3
(EZ009246) TSA: Acropora millepora SeqIndex10426, mRNA seque... 42 1e-06 3
(EG863994) EST_ssal_eve_56887 ssaleve thyroid Salmo salar cD... 56 2e-06 2
(CV197717) CGF1003955_F06 Seed coat from mid-season walnut e... 60 3e-06 2
(EC607921) Y14B11 YLX600 Hevea brasiliensis cDNA clone Y14B1... 60 3e-06 2
(EG861014) EST_ssal_eve_54204 ssaleve thyroid Salmo salar cD... 56 3e-06 2
(EC776924) EST 13420 Guarana fruits cDNA library Paullinia c... 52 3e-06 2
(EG941177) EST_ssal_evf_24628 ssalevf mixed_tissue Salmo sal... 56 3e-06 2
(FL592831) SCDNA_112 GA_HbSCDNA Library Hevea brasiliensis c... 60 3e-06 2
(BG410909) EM1_27_D12.g1_A002 Embryo 1 (EM1) Sorghum bicolor... 52 4e-06 3
(BJ999246) Brachionus plicatilis NHIL mRNA, clone: BpA0642, ... 44 4e-06 3
(ES467260) AH04F09.G Brachionus plicatilis NHIL unnormalized... 44 4e-06 3
(FS265773) Glycyrrhiza uralensis cDNA, clone: S02198-Re13-C0... 46 5e-06 2
(FS265698) Glycyrrhiza uralensis cDNA, clone: S02198-Re11-M0... 46 6e-06 2
(DY634963) PU1_plate39_P21 PU1 Prunus persica cDNA similar t... 60 6e-06 2
(DY645214) PU3_plate46_C23 PU3 Prunus persica cDNA similar t... 60 7e-06 2
(CX261601) 1315131 NCCCWA 02RT Oncorhynchus mykiss cDNA clon... 56 7e-06 2
(DY649112) PU4_plate12_L08 PU4 Prunus persica cDNA similar t... 60 7e-06 2
(DY639282) PU2_plate45_I07 PU2 Prunus persica cDNA similar t... 60 8e-06 2
(DY977630) CLSS11407.b1_M20.ab1 CLS(LMS) lettuce sativa Lact... 48 8e-06 3
(FS249016) Glycyrrhiza uralensis cDNA, clone: KAN074-P19.F, ... 46 8e-06 2
(DY645799) PU3_plate51_D19 PU3 Prunus persica cDNA similar t... 60 8e-06 2
(DY649670) PU4_plate35_L14 PU4 Prunus persica cDNA similar t... 60 8e-06 2
(DY645264) PU3_plate46_H23 PU3 Prunus persica cDNA similar t... 60 8e-06 2
(DY638876) PU2_plate34_B06 PU2 Prunus persica cDNA similar t... 60 8e-06 2
(CV052833) EST 12281 Half-Ripe Apricot Fruit Lambda Zap II L... 60 8e-06 2
(CO825005) LM_GB5_005331 Locusta migratoria gregarious phase... 52 8e-06 2
(DY637759) PU2_plate16_B02 PU2 Prunus persica cDNA similar t... 60 9e-06 2
(DY648752) PU4_plate11_P22 PU4 Prunus persica cDNA similar t... 60 9e-06 2
(DY639330) PU2_plate46_G15 PU2 Prunus persica cDNA similar t... 60 9e-06 2
(DY642531) PU3_plate22_H14 PU3 Prunus persica cDNA similar t... 60 9e-06 2
(DY634860) PU1_plate31_J03 PU1 Prunus persica cDNA similar t... 60 9e-06 2
(DY644695) PU3_plate42_O20 PU3 Prunus persica cDNA similar t... 60 9e-06 2
(DY635810) PU1_plate49_O04 PU1 Prunus persica cDNA similar t... 60 9e-06 2
(EL370519) CCES6493.b1_J16.ab1 CCE(LMS) endive Cichorium end... 64 1e-05 1
(EH698590) CCIS10804.b1_G13.ab1 CCI(LMS) chicory Cichorium i... 64 1e-05 1
(EB715414) F-1097 Melon phloem library F Cucumis melo cDNA c... 60 1e-05 2
(BW116917) Ciona intestinalis cDNA, clone:rcitb075e12, 3' en... 48 1e-05 2
(GO528754) Mdwdr7510F15.g1 Apple_EST_Mdwdr Malus x domestica... 42 1e-05 3
(DC028924) Xenopus laevis NBRP cDNA clone:rxlk154l15ex, 3' end. 42 1e-05 3
(FM937923) Brachionus plicatilis EST 5' end, clone sb104P004... 42 2e-05 3
(EH151460) LB01353.CR_N19 GC_BGC-13 Bos taurus cDNA clone IM... 40 2e-05 3
(FK744316) av01008j21r1.1 Symbiotic sea anemone (Anemonia vi... 38 2e-05 3
(EE215982) LB01235.CR_K03 GC_BGC-12 Bos taurus cDNA clone IM... 40 2e-05 3
(AV976552) Ciona intestinalis cDNA, clone:cieg42g04, 5' end,... 40 2e-05 3
(FE002961) C0009279E20.Q1KM13R KN510 M. bovis infected Bos t... 40 2e-05 3
(CX287398) C01009B03SK Veg1 Citrus clementina cDNA clone C01... 60 3e-05 2
(FE002960) C0009279E20.P1KAM13F KN510 M. bovis infected Bos ... 40 3e-05 3
(DN797663) USDA-FP/ARO_12531 Star Ruby grapefruit temperatur... 60 3e-05 2
(EV681738) LB03517.CR_G07 GC_BGC-35 Bos taurus cDNA clone IM... 40 3e-05 3
(AJ800538) Antirrhinum majus EST, clone 018_4_10_l08. 60 3e-05 2
(DT808953) LB0162.CR_C24 GC_BGC-16 Bos taurus cDNA clone IMA... 40 3e-05 3
(BP002041) Ciona intestinalis cDNA, clone:ciad25a07, 5' end,... 40 3e-05 3
(BQ991577) QGF23D24.yg.ab1 QG_EFGHJ lettuce serriola Lactuca... 56 3e-05 2
(CX290387) C02023F08SK IF1 Citrus clementina cDNA clone C020... 60 3e-05 2
(BY880056) Cryptomeria japonica cDNA clone: CMFL006_P17, 5'e... 60 3e-05 2
(BY893577) Cryptomeria japonica cDNA clone: CMFL043_P11, 5'e... 60 3e-05 2
(AV983813) Ciona intestinalis cDNA, clone:cieg28d20, 5' end,... 40 4e-05 3
(EY502981) CBBP6670.fwd CBBP Hirudo medicinalis hermaphrodit... 58 4e-05 2
(DW503596) GH_TMIRS_075_G12_F Cotton Normalized Library dT p... 62 4e-05 1
(AM389236) Brassica oleracea var. alboglabra EST, clone AAF... 62 4e-05 1
(FD988718) RR4GQ51TF RR4(PB) Raphanus raphanistrum subsp. la... 62 4e-05 1
(FD984585) RR4GQ51JQ RR4(PB) Raphanus raphanistrum subsp. la... 62 4e-05 1
(FD970419) RR2G288TF RR2(MS) Raphanus raphanistrum subsp. ra... 62 4e-05 1
(FD964086) RR1GM44TF RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(FD960204) RR1GM44JQ RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(FD949583) RS2HC04TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 62 4e-05 1
(FD573082) RS2EU78JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 62 4e-05 1
(FD567729) RS1FL09JQ RS1(AR) Raphanus sativus var. oleiformi... 62 4e-05 1
(FD564183) RS1FL09TF RS1(AR) Raphanus sativus var. oleiformi... 62 4e-05 1
(FD557450) RR4EW78TF RR4(PB) Raphanus raphanistrum subsp. la... 62 4e-05 1
(EY940520) RS2E777TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 62 4e-05 1
(EY939469) RS2DV59TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 62 4e-05 1
(EY935399) RS2DV59JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 62 4e-05 1
(EY902352) RR2DF88JQ RR2(MS) Raphanus raphanistrum subsp. ra... 62 4e-05 1
(EY901273) RR1EF37TF RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(EY898437) RR1DJ74TF RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(EY897100) RR1D493TF RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(EY894498) RR1DJ74JQ RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(EY893506) RR1D493JQ RR1(CS) Raphanus raphanistrum subsp. ma... 62 4e-05 1
(EW716561) RS1BF46TF RS1(AR) Raphanus sativus var. oleiformi... 62 4e-05 1
(EL363482) CCEM7965.b1_I24.ab1 CCE(LMS) endive Cichorium end... 58 4e-05 2
(CX668195) UCRCP01_036_C01_T7 Swingle citrumelo nematode-cha... 60 4e-05 2
(CB293242) UCRCS01_05db11_b1 Washington Navel orange cold ac... 60 4e-05 2
(FC283717) CAGN26039.fwd CAGN Nematostella vectensis Nemve m... 44 4e-05 2
(EY741383) CS00-C3-705-084-B07-CT.F Sweet orange fruit, deve... 60 4e-05 2
(CB293243) UCRCS01_05db11_g1 Washington Navel orange cold ac... 60 4e-05 2
(EX446854) Volcani_7_22_H6 Volcani07 Citrus reticulata x Cit... 60 4e-05 2
(CX668194) UCRCP01_036_C01_T3 Swingle citrumelo nematode-cha... 60 4e-05 2
(BP011702) Ciona intestinalis cDNA, clone:ciad30f14, 5' end,... 40 5e-05 3
(CX078494) UCRCS08_9D09_b Parent Washington Navel Orange Cal... 60 5e-05 2
(BW036884) Ciona intestinalis cDNA, clone:cibd032a12, 5' end... 40 5e-05 3
(EY693895) CS00-C3-700-019-F06-CT.F Sweet orange fruit, deve... 60 5e-05 2
(BW292290) Ciona intestinalis cDNA, clone:cigd047b05, 5' end... 40 5e-05 3
(BW208255) Ciona intestinalis cDNA, clone:cieg100g02, 5' end... 40 5e-05 3
(BW357961) Ciona intestinalis cDNA, clone:cima814f18, 5'end,... 40 5e-05 3
(AV948227) Ciona intestinalis cDNA, clone:cicl01j08, 5' end,... 40 5e-05 3
(BW291329) Ciona intestinalis cDNA, clone:cigd044b18, 5' end... 40 5e-05 3
(EY773864) CR05-C1-102-078-C09-CT.F Mandarin leaf, infected ... 60 5e-05 2
(BP003028) Ciona intestinalis cDNA, clone:ciad28d20, 5' end,... 40 5e-05 3
(BW264414) Ciona intestinalis cDNA, clone:cign038b14, 5' end... 40 5e-05 3
(BW356332) Ciona intestinalis cDNA, clone:cima809j22, 5'end,... 40 5e-05 3
(BW244506) Ciona intestinalis cDNA, clone:citb064n10, 5' end... 40 6e-05 3
(BW233178) Ciona intestinalis cDNA, clone:ciad099m23, 5' end... 40 6e-05 3
(BW219965) Ciona intestinalis cDNA, clone:cieg097p10, 5' end... 40 6e-05 3
(BW232594) Ciona intestinalis cDNA, clone:ciad102o07, 5' end... 40 6e-05 3
(FK191333) XABT205521.b1 Gateway compatible cien cDNA librar... 40 6e-05 3
(BW319934) Ciona intestinalis cDNA, clone:cidg802p21, 5'end,... 40 6e-05 3
(BW321398) Ciona intestinalis cDNA, clone:cidg807c22, 5'end,... 40 6e-05 3
(BW264731) Ciona intestinalis cDNA, clone:cign039c15, 5' end... 40 6e-05 3
(DV780619) Hw_Fat_66_050830_D09 Bos taurus CF-24-HW fat cDNA... 40 6e-05 3
(FF552001) MOPF584TF MOP Vigna unguiculata cDNA 5', mRNA seq... 38 6e-05 3
(FF549845) MOPF584TR MOP Vigna unguiculata cDNA 3', mRNA seq... 38 6e-05 3
(FF883481) CBWU22467.b1 Yutaka Satou unpublished cDNA librar... 40 6e-05 3
(AV989285) Ciona intestinalis cDNA, clone:citb34o11, 5' end,... 40 6e-05 3
(FF687062) XABT101023.fwd Gateway compatible cien cDNA libra... 40 7e-05 3
(FK100139) XABT148517.b1 Gateway compatible cien cDNA librar... 40 7e-05 3
(FG833394) UCRVU04_CCNI15911_b1 Cowpea 524B Mixed Tissue and... 38 7e-05 3
(DC114756) Xenopus laevis NBRP cDNA clone:xl270b08, 5' end. 42 7e-05 3
(BW478094) Ciona intestinalis cDNA, clone:cima016j22, 5'end,... 40 7e-05 3
(BW483239) Ciona intestinalis cDNA, clone:cima031g03, 5'end,... 40 7e-05 3
(FF543049) MOPC346TF MOP Vigna unguiculata cDNA 5', mRNA seq... 38 8e-05 3
(FF864618) CBWU10855.b1 Yutaka Satou unpublished cDNA librar... 40 8e-05 3
(FF557046) MOPEO85TF MOP Vigna unguiculata cDNA 5', mRNA seq... 38 8e-05 3
(CV196139) CGF1003480_C10 Seed coat from mid-season walnut e... 58 8e-05 2
(FF848385) CBWU1013.b1 Yutaka Satou unpublished cDNA library... 40 8e-05 3
(FF930325) CBWU67544.b1 Yutaka Satou unpublished cDNA librar... 40 8e-05 3
(EB757992) 665935 MN12 Leptinotarsa decemlineata cDNA clone ... 44 8e-05 2
(FF892677) CBWU28386.b1 Yutaka Satou unpublished cDNA librar... 40 8e-05 3
(FF840765) EST_tthy_evl_877006 tthy_evl Thymallus thymallus ... 40 9e-05 3
(BG357725) OV2_29_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor ... 54 1e-04 2
(FK224520) XABT226719.b1 Gateway compatible cien cDNA librar... 38 1e-04 3
(FK226622) XABT228181.b1 Gateway compatible cien cDNA librar... 38 1e-04 3
(FM906421) Brachionus plicatilis EST 5' end, clone sb101P003... 46 1e-04 2
(CV580811) kd06g08.y2 Xiphinema index CSEQDL01 Xiphinema ind... 50 1e-04 2
(CD329202) AGENCOURT_14143843 NICHD_XGC_Brn1 Xenopus laevis ... 42 1e-04 2
(CD479956) eca01-67ms2-e06 Eca01 Eschscholzia californica cD... 44 2e-04 2
(FJ789639) Brassica rapa subsp. pekinensis, pooled multiple ... 60 2e-04 1
(AC232452) Brassica rapa subsp. pekinensis clone KBrB011D06,... 60 2e-04 1
(FI049932) CHO_OF6511xa05r1.ab1 CHO_OF6 Nicotiana tabacum ge... 60 2e-04 1
(FH672888) CHO_OF5037xg17r1.ab1 CHO_OF5 Nicotiana tabacum ge... 60 2e-04 1
(ED536159) KBrB128P09F KBrB, Brassica rapa BamHI BAC library... 60 2e-04 1
(DN773225) E827 [C1595|cld17_e11] Cold Library Thellungiella... 60 2e-04 1
(DC844082) Brassica rapa subsp. pekinensis mRNA, clone: BRes... 60 2e-04 1
(BY819830) Thellungiella halophila cDNA clone: RTFL01-29-M13... 60 2e-04 1
(BB923959) Trifolium pratense cDNA clone:RCE32201. 60 2e-04 1
(GD127955) KS25046E24 KS25 Capsicum annuum cDNA, mRNA sequence. 60 2e-04 1
(GD052909) KS13010B07 KS13 Capsicum annuum cDNA, mRNA sequence. 60 2e-04 1
(FS256231) Glycyrrhiza uralensis cDNA, clone: KAN096-G06.F, ... 60 2e-04 1
(FS250871) Glycyrrhiza uralensis cDNA, clone: KAN080-H21.F, ... 60 2e-04 1
(EX768675) RR3CJ91JQ RR3(NY) Raphanus raphanistrum subsp. ra... 60 2e-04 1
(EX764830) RR3CJ91TF RR3(NY) Raphanus raphanistrum subsp. ra... 60 2e-04 1
(EX122747) BR106577 mature green leaf cDNA library KHLM Bras... 60 2e-04 1
(EX101869) BR088159 seed and seedling cDNA library KFSD Bras... 60 2e-04 1
(EX093407) BR079697 flower cDNA library KFFB Brassica rapa s... 60 2e-04 1
(EX066939) BR051583 pollen cDNA library KBPL Brassica rapa s... 60 2e-04 1
(ES942721) 47RDOAH_UP_083_C07_01FEB2006_059 Brassica olerace... 60 2e-04 1
(EL900467) CGF2003230_E07 WRO-02: Walnut root Juglans hinds... 58 2e-04 2
(DY833464) CTOY9389.b1_J19.ab1 CTO(XYZ) dandelion Taraxacum ... 44 2e-04 2
(DR929367) EST1120906 Aquilegia cDNA library Aquilegia formo... 52 2e-04 2
(DR929368) EST1120907 Aquilegia cDNA library Aquilegia formo... 52 2e-04 2
(BM885638) sam03d02.y1 Gm-c1063 Glycine max cDNA clone SOYBE... 38 2e-04 3
(FK220686) XABT223899.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FK201289) XABT211722.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FK056379) XABT121674.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FF787217) XABT84272.fwd Gateway compatible cien cDNA librar... 38 2e-04 3
(BC104514) Bos taurus chromatin modifying protein 2B, mRNA (... 40 2e-04 3
(FK024569) GLRAI96TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 38 2e-04 3
(BU927308) sas98a04.y1 Gm-c1036 Glycine max cDNA clone SOYBE... 38 2e-04 3
(FK065506) XABT127188.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FF778917) XABT78822.fwd Gateway compatible cien cDNA librar... 38 2e-04 3
(FK182664) XABT200123.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FK087839) XABT141013.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FK148684) XABT179117.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(EU025709) Salmo salar chromatin modifying protein 2a (Chmp2... 44 2e-04 3
(FF750350) XABT59144.fwd Gateway compatible cien cDNA librar... 38 2e-04 3
(FK144090) XABT176366.b1 Gateway compatible cien cDNA librar... 38 2e-04 3
(FF792620) XABT87834.fwd Gateway compatible cien cDNA librar... 38 2e-04 3
(FK001322) GLPAL80TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 38 2e-04 3
(FF691562) XABT103981.fwd Gateway compatible cien cDNA libra... 38 2e-04 3
(FK047553) XABT115974.b1 Gateway compatible cien cDNA librar... 38 3e-04 3
(FK026383) GLRAT16TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 38 3e-04 3
(EH221261) JGI_ABWZ1882.fwd ABWZ Phakopsora pachyrhizi infec... 38 3e-04 3
(EH221495) JGI_ABWZ2079.fwd ABWZ Phakopsora pachyrhizi infec... 38 3e-04 3
(EC368739) G840P313FD5.T0 Oscarella carmela pSport1 Library ... 40 3e-04 3
(FM944851) Brachionus plicatilis EST 5' end, clone sbs04P001... 46 3e-04 3
(FK024570) GLRAI96TR JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 38 3e-04 3
(EV273695) GLMBY33TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 38 3e-04 3
(FF749822) XABT58800.fwd Gateway compatible cien cDNA librar... 38 3e-04 3
(CX710968) gmrtDrNS01_25-D_M13R_E10_072.s2 Water stressed 5h... 38 4e-04 3
(FM901924) Brachionus plicatilis EST 5' end, clone sb101P001... 52 4e-04 2
(EC369115) G840P313RD5.T0 Oscarella carmela pSport1 Library ... 40 4e-04 3
(FF751601) XABT60003.fwd Gateway compatible cien cDNA librar... 38 4e-04 3
(DC185229) Xenopus (Silurana) tropicalis NBRP cDNA clone: st... 38 4e-04 4
(AK285961) Glycine max cDNA, clone: GMFL01-19-G13. 38 6e-04 3
(FK759102) av01013f17r1.1 Symbiotic sea anemone (Anemonia vi... 38 6e-04 2
(FK758676) av02115g02r1.1 Symbiotic sea anemone (Anemonia vi... 38 6e-04 2
(FK737621) av02099p08r1.1 Symbiotic sea anemone (Anemonia vi... 38 6e-04 2
(DR035644) 19612.3 Swollen Stolon Solanum tuberosum cDNA clo... 58 6e-04 1
(CO845074) LM_GM5_002664 Locusta migratoria gregarious phase... 58 6e-04 1
(DW014250) w7m13_M13F Myzus persicae, tobacco lineage, whole... 34 6e-04 4
(DC038863) Xenopus laevis NBRP cDNA clone:xlk110b02ex, 5' end. 42 7e-04 4
(FK011097) GLQAD60TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 36 0.001 3
(BG463506) EM1_49_C11.g1_A002 Embryo 1 (EM1) Sorghum bicolor... 52 0.002 2
(GO390608) CTA723-2006-02-09 Atlantic cod intestine library ... 44 0.002 2
(BI316924) saf82c10.y1 Gm-c1079 Glycine max cDNA clone GENOM... 36 0.002 3
(CF758691) DSAF1_35_E06.g1_A011 Drought-stressed after flowe... 52 0.002 2
(GD001167) CCHY27000.g1 CCHY Panicum virgatum callus (N) Pan... 52 0.002 2
(GD001166) CCHY27000.b1 CCHY Panicum virgatum callus (N) Pan... 52 0.002 2
(FM871140) Triops cancriformis EST, 5' end, clone dmp019P001... 42 0.002 3
(BG357412) OV2_29_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor ... 52 0.002 2
(CO541796) gm_J005.76 Cod ovary Zap Express library Gadus mo... 44 0.002 2
(BU881091) UM58TE08 Populus flower cDNA library Populus tric... 42 0.002 2
(CF483595) POL1_23_H07.b1_A002 Pollen Sorghum bicolor cDNA c... 52 0.002 2
(EG640375) gmapov_0018f21.pDNRm13r.scf Gadus morhua ovary li... 44 0.002 2
(FL989505) CCHY20254.g1 CCHY Panicum virgatum callus (N) Pan... 52 0.002 2
(FE650259) CBYZ8541.b1 CBYZ Panicum virgatum Kanlow 4 day ol... 52 0.002 2
(EC379038) Pf_IL_284D08 TriplEx-5LD Flounder IL Induced Live... 44 0.002 2
(ES480731) gmapov_0018f21.pDNRF2 Gadus morhua ovary library ... 44 0.002 2
(EX181685) gmnbmu_0006i19.pDNRm13r Gadus morhua skeletal mus... 44 0.002 2
(EV224473) 0106399 Brassica napus Damaged cotyledons Brassic... 38 0.002 2
(FL989504) CCHY20254.b1 CCHY Panicum virgatum callus (N) Pan... 52 0.002 2
(CX990950) DOG_EST_P61A11 Canis familiaris testis cDNA Canis... 42 0.002 2

>(C84820) Dictyostelium discoideum slug cDNA, clone SSG236.
Length = 557

Score = 496 bits (250), Expect(3) = 0.0
Identities = 262/266 (98%)
Strand = Plus / Plus


Query: 323 ttaagaaaatggctaaacaaggtcaaatgaactctgcaaaaattatggcaaaagatttag 382
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 5 ttaagacaatggctaaacaaggtcaaatgaactctgcaaaaattatggcaaaagatttcg 64


Query: 383 ttagaaccagatatcatatacaaaagttttatgaaatgaaaacacaattacaagctgtta 442
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 65 ttagaaccagatatcatatacaaaagttttatgaaatgaaaacccaattacaagctgtta 124


Query: 443 gtcttagaatccaaacattacaatcaacacaagcaatggcagaagcaatgaaaggtgtta 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtcttagaatccaaacattacaatcaacacaagcaatggcagaagcaatgaaaggtgtta 184


Query: 503 caaaagcaatgattacaatgaatagacaaatgaatttaccacaatttacaaagattatga 562
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 caaaagccatgattacaatgaatagacaaatgaatttaccacaatttacaaagattatga 244


Query: 563 tggaatttgaacaacaatcagataaa 588
||||||||||||||||||||||||||
Sbjct: 245 tggaatttgaacaacaatcagataaa 270

Score = 398 bits (201), Expect(3) = 0.0
Identities = 201/201 (100%)
Strand = Plus / Plus


Query: 588 ataaaatggatatgaaagaggaaatgatgaatgacacaatggatcaagttatggaacaag 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ataaaatggatatgaaagaggaaatgatgaatgacacaatggatcaagttatggaacaag 325


Query: 648 atggtgaggaagaacaatcacaagaaattttaaatcaagttttggatgaaattggtattg 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atggtgaggaagaacaatcacaagaaattttaaatcaagttttggatgaaattggtattg 385


Query: 708 atttggcttcacaattagtagatgcaccaactactgttggtacctctgtagcctcaaaac 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atttggcttcacaattagtagatgcaccaactactgttggtacctctgtagcctcaaaac 445


Query: 768 atcaagttaattctggttaaa 788
|||||||||||||||||||||
Sbjct: 446 atcaagttaattctggttaaa 466

Score = 54.0 bits (27), Expect(3) = 0.0
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 808 gtattatattagatataaattatttat 834
|||||||||||||||||||||||||||
Sbjct: 486 gtattatattagatataaattatttat 512

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 898,652,594
Number of extensions: 54627917
Number of successful extensions: 4475771
Number of sequences better than 10.0: 1366
Length of query: 869
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 845
Effective length of database: 102,084,959,077
Effective search space: 86261790420065
Effective search space used: 86261790420065
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 8. 1
Homology vs Protein
Query= Contig-U05205-1 (Contig-U05205-1Q) /CSM_Contig/Contig-U05205-1Q.Seq.d
(869 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AM425689_1(AM425689|pid:none) Vitis vinifera contig VV78X267041.... 189 2e-59
BT065136_1(BT065136|pid:none) Zea mays full-length cDNA clone ZM... 187 4e-59
BT057370_1(BT057370|pid:none) Salmo salar clone ssal-evd-571-229... 190 9e-59
BT073784_1(BT073784|pid:none) Oncorhynchus mykiss clone omyk-evo... 189 2e-58
(Q701F9) RecName: Full=Vacuolar protein sorting-associated prote... 187 4e-58
AY088685_1(AY088685|pid:none) Arabidopsis thaliana clone 91878 m... 187 4e-58
(Q6DFS6) RecName: Full=Charged multivesicular body protein 2a; A... 188 7e-58
BC152230_1(BC152230|pid:none) Danio rerio putative breast adenoc... 185 4e-57
BT036402_1(BT036402|pid:none) Zea mays full-length cDNA clone ZM... 182 8e-57
(Q7ZW25) RecName: Full=Charged multivesicular body protein 2a; A... 184 1e-56
EU965213_1(EU965213|pid:none) Zea mays clone 284556 charged mult... 182 5e-56
AY890758_1(AY890758|pid:none) Synthetic construct Homo sapiens c... 181 7e-56
(Q9DB34) RecName: Full=Charged multivesicular body protein 2a; A... 181 7e-56
BC102258_1(BC102258|pid:none) Bos taurus chromatin modifying pro... 181 1e-55
AE014297_4075(AE014297|pid:none) Drosophila melanogaster chromos... 174 7e-55
AL110485_11(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A... 181 7e-55
AK339864_1(AK339864|pid:none) Acyrthosiphon pisum ACYPI008820 mR... 171 2e-54
(Q5ZHN1) RecName: Full=Charged multivesicular body protein 2a; A... 179 2e-54
EU967771_1(EU967771|pid:none) Zea mays clone 305958 unknown mRNA. 182 2e-54
D84478(D84478)hypothetical protein At2g06530 [imported] - Arabid... 173 6e-54
BT078425_1(BT078425|pid:none) Lepeophtheirus salmonis Pacific fo... 175 2e-53
AJ628449_1(AJ628449|pid:none) Arabidopsis thaliana partial At2g0... 171 2e-53
AJ628535_1(AJ628535|pid:none) Arabidopsis thaliana partial At2g0... 171 2e-53
AJ628544_1(AJ628544|pid:none) Arabidopsis thaliana partial At2g0... 171 3e-53
BT075992_1(BT075992|pid:none) Caligus rogercresseyi clone crog-e... 175 7e-53
BT078268_1(BT078268|pid:none) Lepeophtheirus salmonis Pacific fo... 175 7e-53
CR954212_192(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 174 7e-52
BT081097_1(BT081097|pid:none) Caligus clemensi clone ccle-evs-51... 171 9e-52
BT081330_1(BT081330|pid:none) Caligus clemensi clone ccle-evs-50... 170 1e-51
BT076646_1(BT076646|pid:none) Caligus rogercresseyi clone crog-e... 170 2e-51
AM920436_343(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 164 1e-49
AM270324_26(AM270324|pid:none) Aspergillus niger contig An14c017... 164 1e-47
EU009656_1(EU009656|pid:none) Taenia solium Ts1 (Ts1) mRNA, comp... 147 3e-46
AB331965_1(AB331965|pid:none) Aspergillus oryzae Aovps2 gene for... 149 9e-46
CR382137_536(CR382137|pid:none) Debaryomyces hansenii strain CBS... 146 2e-45
FN392321_1191(FN392321|pid:none) Pichia pastoris GS115 chromosom... 148 8e-45
CP000501_291(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 145 3e-44
CU928168_263(CU928168|pid:none) Kluyveromyces thermotolerans str... 152 7e-43
CU633900_498(CU633900|pid:none) Podospora anserina genomic DNA c... 148 2e-42
AM502245_234(AM502245|pid:none) Leishmania infantum chromosome 27. 148 2e-42
CR382122_552(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 147 3e-42
AM494964_158(AM494964|pid:none) Leishmania braziliensis chromoso... 147 6e-42
(P36108) RecName: Full=DOA4-independent degradation protein 4; A... 142 6e-41
FN357320_15(FN357320|pid:none) Schistosoma mansoni genome sequen... 130 2e-38
AX885468_1(AX885468|pid:none) Sequence 1331 from Patent EP1033401. 160 4e-38
(O14177) RecName: Full=Uncharacterized protein C4F8.01; &AL3550... 120 4e-37
AX885470_1(AX885470|pid:none) Sequence 1333 from Patent EP1033401. 157 4e-37
FN315163_1(FN315163|pid:none) Schistosoma japonicum isolate Anhu... 117 1e-34
FN315164_1(FN315164|pid:none) Schistosoma japonicum isolate Anhu... 114 1e-33
FN320300_1(FN320300|pid:none) Schistosoma japonicum isolate Anhu... 112 4e-33
(Q941D5) RecName: Full=Vacuolar protein sorting-associated prote... 102 3e-32
BT068650_1(BT068650|pid:none) Zea mays full-length cDNA clone ZM... 97 6e-32
CP001574_554(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 107 6e-32
AC147427_17(AC147427|pid:none) Oryza sativa chromosome 3 B1394A... 99 2e-31
Z98530_14(Z98530|pid:none) S.pombe chromosome I cosmid c4F8. 101 2e-31
(Q6NXD2) RecName: Full=Charged multivesicular body protein 2b; A... 87 5e-31
EF148488_1(EF148488|pid:none) Populus trichocarpa x Populus delt... 97 1e-30
EF083439_1(EF083439|pid:none) Picea sitchensis clone WS02718_D03... 98 2e-30
(Q0WTY4) RecName: Full=Vacuolar protein sorting-associated prote... 100 2e-30
BT005848_1(BT005848|pid:none) Arabidopsis thaliana At5g44560 gen... 100 2e-30
BT069593_1(BT069593|pid:none) Zea mays full-length cDNA clone ZM... 94 3e-30
AC078829_12(AC078829|pid:none) Oryza sativa chromosome 10 BAC OS... 91 1e-29
(Q5F3A2) RecName: Full=Charged multivesicular body protein 2b; A... 86 1e-28
(Q6NVL7) RecName: Full=Charged multivesicular body protein 2b; A... 85 3e-28
AC003027_12(AC003027|pid:none) Arabidopsis thaliana chromosome I... 88 6e-28
(Q7SYR0) RecName: Full=Charged multivesicular body protein 2b-A;... 84 2e-27
AL080122_1(AL080122|pid:none) Homo sapiens mRNA; cDNA DKFZp564O1... 82 4e-27
(Q8BJF9) RecName: Full=Charged multivesicular body protein 2b; A... 82 4e-27
BT075857_1(BT075857|pid:none) Caligus rogercresseyi clone crog-e... 84 6e-27
FN320302_1(FN320302|pid:none) Schistosoma japonicum isolate Anhu... 112 6e-27
AB024024_1(AB024024|pid:none) Arabidopsis thaliana genomic DNA, ... 88 2e-26
BT075788_1(BT075788|pid:none) Caligus rogercresseyi clone crog-e... 86 4e-26
AM428663_1(AM428663|pid:none) Vitis vinifera contig VV78X020635.... 79 1e-25
BT077464_1(BT077464|pid:none) Lepeophtheirus salmonis Pacific fo... 84 1e-25
AY814107_1(AY814107|pid:none) Schistosoma japonicum SJCHGC01479 ... 82 6e-24
Z81029_5(Z81029|pid:none) Caenorhabditis elegans Cosmid C01A2, c... 76 1e-23
BC042626_1(BC042626|pid:none) Mus musculus chromatin modifying p... 70 2e-23
(Q54GK9) RecName: Full=Charged multivesicular body protein 2a ho... 110 6e-23
EU637017_24(EU637017|pid:none) Adineta vaga glycoprotein gene, p... 83 4e-22
T38831(T38831)hypothetical protein SPAC4F8.01 - fission yeast (... 63 6e-20
CR380957_117(CR380957|pid:none) Candida glabrata strain CBS138 c... 65 1e-18
AC113930_11(AC113930|pid:none) Oryza sativa (japonica cultivar-g... 77 5e-18
AP008209_58(AP008209|pid:none) Oryza sativa (japonica cultivar-g... 77 5e-18
BT061369_1(BT061369|pid:none) Zea mays full-length cDNA clone ZM... 73 2e-17
U58762_6(U58762|pid:none) Caenorhabditis elegans cosmid T27F7, c... 90 9e-17
CR940348_293(CR940348|pid:none) Theileria annulata strain Ankara... 85 3e-15
(Q6DF27) RecName: Full=Charged multivesicular body protein 1b; A... 62 1e-14
(Q6NY88) RecName: Full=Charged multivesicular body protein 3; Al... 76 2e-14
(Q9Y3E7) RecName: Full=Charged multivesicular body protein 3; Al... 74 2e-14
AF219226_1(AF219226|pid:none) Homo sapiens neuroendocrine differ... 74 2e-14
BC168175_1(BC168175|pid:none) Rattus norvegicus chromatin modify... 62 2e-14
(Q7LBR1) RecName: Full=Charged multivesicular body protein 1b; A... 62 3e-14
AF281064_1(AF281064|pid:none) Homo sapiens CHMP1.5 mRNA, complet... 62 3e-14
(Q99LU0) RecName: Full=Charged multivesicular body protein 1b-1;... 62 4e-14
(Q6NRM7) RecName: Full=Charged multivesicular body protein 3; Al... 69 1e-13
AK014091_1(AK014091|pid:none) Mus musculus 13 days embryo head c... 62 1e-13
BT056837_1(BT056837|pid:none) Salmo salar clone ssal-eve-562-216... 61 1e-13
BT057167_1(BT057167|pid:none) Salmo salar clone ssal-rgb2-640-12... 60 1e-13
BT073648_1(BT073648|pid:none) Oncorhynchus mykiss clone omyk-evn... 60 2e-13
CR380958_67(CR380958|pid:none) Candida glabrata strain CBS138 ch... 70 3e-13
(Q7ZVB1) RecName: Full=Charged multivesicular body protein 1b; A... 63 3e-13
(Q5BKM3) RecName: Full=Charged multivesicular body protein 3; Al... 66 5e-13
AM910987_164(AM910987|pid:none) Plasmodium knowlesi strain H chr... 65 1e-12
BT075352_1(BT075352|pid:none) Osmerus mordax clone omor-rgc-504-... 76 1e-12
BT081016_1(BT081016|pid:none) Caligus clemensi clone ccle-evs-50... 76 2e-12
BT045728_1(BT045728|pid:none) Salmo salar clone ssal-rgf-529-351... 75 2e-12
BT047887_1(BT047887|pid:none) Salmo salar clone ssal-rgb2-630-21... 75 2e-12
AK167614_1(AK167614|pid:none) Mus musculus 13 days pregnant adul... 55 3e-12
(Q58CS7) RecName: Full=Charged multivesicular body protein 3; Al... 74 6e-12
BT021870_1(BT021870|pid:none) Bos taurus vacuolar protein sortin... 74 6e-12
AK009414_1(AK009414|pid:none) Mus musculus adult male tongue cDN... 74 8e-12
(Q9CQ10) RecName: Full=Charged multivesicular body protein 3; Al... 74 8e-12
(Q8CGS4) RecName: Full=Charged multivesicular body protein 3; Al... 74 8e-12
BT046106_1(BT046106|pid:none) Salmo salar clone ssal-rgf-541-297... 73 1e-11
AF083749_1(AF083749|pid:none) Arabidopsis thaliana clone sps517 ... 73 1e-11
(Q9FFB3) RecName: Full=Vacuolar protein sorting-associated prote... 73 1e-11
BT074735_1(BT074735|pid:none) Osmerus mordax clone omor-rgc-501-... 57 2e-11
EU953715_1(EU953715|pid:none) Zea mays clone 1444697 hypothetica... 53 2e-11
CU928168_317(CU928168|pid:none) Kluyveromyces thermotolerans str... 62 2e-11
CR382128_719(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 65 6e-11
DQ910328_1(DQ910328|pid:none) Anopheles funestus clone AF-169 va... 70 7e-11
AX886086_1(AX886086|pid:none) Sequence 1949 from Patent EP1033401. 70 9e-11
AK294389_1(AK294389|pid:none) Homo sapiens cDNA FLJ58988 complet... 60 1e-10
BT074798_1(BT074798|pid:none) Osmerus mordax clone omor-eva-505-... 59 8e-10
BT075842_1(BT075842|pid:none) Caligus rogercresseyi clone crog-e... 48 8e-10
DQ311345_1(DQ311345|pid:none) Bombyx mori chromatin modifying pr... 67 1e-09
CR382126_1082(CR382126|pid:none) Kluyveromyces lactis strain NRR... 59 2e-09
FN317503_1(FN317503|pid:none) Schistosoma japonicum isolate Anhu... 64 7e-09
FN357362_30(FN357362|pid:none) Schistosoma mansoni genome sequen... 64 7e-09
AE014296_3224(AE014296|pid:none) Drosophila melanogaster chromos... 64 9e-09
AY813638_1(AY813638|pid:none) Schistosoma japonicum SJCHGC01919 ... 47 1e-08
FN319193_1(FN319193|pid:none) Schistosoma japonicum isolate Anhu... 47 1e-08
(P36095) RecName: Full=Vacuolar protein-sorting-associated prote... 63 1e-08
(Q5ZKX1) RecName: Full=Charged multivesicular body protein 1b; A... 62 2e-08
CP000496_7(CP000496|pid:none) Pichia stipitis CBS 6054 chromosom... 52 2e-08
DQ480534_1(DQ480534|pid:none) Schistosoma mansoni vacuolar assem... 48 2e-08
AY815826_1(AY815826|pid:none) Schistosoma japonicum SJCHGC01901 ... 62 3e-08
(O96552) RecName: Full=Charged multivesicular body protein 1; Al... 59 2e-07
FN392319_331(FN392319|pid:none) Pichia pastoris GS115 chromosome... 59 3e-07
CR382136_807(CR382136|pid:none) Debaryomyces hansenii strain CBS... 59 3e-07
T18795(T18795)hypothetical protein C01A2.4 - Caenorhabditis eleg... 58 4e-07
AF106583_3(AF106583|pid:none) Caenorhabditis elegans cosmid F23C... 51 5e-07
BT007553_1(BT007553|pid:none) Synthetic construct Homo sapiens p... 46 1e-06
(Q5R605) RecName: Full=Charged multivesicular body protein 1a; A... 46 1e-06
BT051673_1(BT051673|pid:none) Medicago truncatula clone MTYF5_F6... 55 2e-06
AY243475_1(AY243475|pid:none) Zea mays superal1 (Sal1) mRNA, com... 55 3e-06
EU961781_1(EU961781|pid:none) Zea mays clone 238223 charged mult... 55 3e-06
FM992692_262(FM992692|pid:none) Candida dubliniensis CD36 chromo... 45 4e-06
BC168427_1(BC168427|pid:none) Xenopus tropicalis cDNA clone MGC:... 44 4e-06
(Q6NUD8) RecName: Full=Charged multivesicular body protein 1a; A... 44 4e-06
AK061733_1(AK061733|pid:none) Oryza sativa Japonica Group cDNA c... 54 5e-06
AM270325_28(AM270325|pid:none) Aspergillus niger contig An14c018... 48 7e-06
EU096087_1(EU096087|pid:none) Hordeum vulgare subsp. vulgare SAL... 53 1e-05
AY816137_1(AY816137|pid:none) Schistosoma japonicum clone SJCHGC... 53 1e-05
AM931536_1(AM931536|pid:none) Hordeum vulgare subsp. vulgare par... 53 1e-05
AM931535_1(AM931535|pid:none) Hordeum vulgare partial sal1 gene ... 53 2e-05
CR382129_389(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 52 3e-05
AE017341_438(AE017341|pid:none) Cryptococcus neoformans var. neo... 52 3e-05
AM920436_315(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 46 3e-05
AY084868_1(AY084868|pid:none) Arabidopsis thaliana clone 119909 ... 51 4e-05
CR382126_920(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 50 1e-04
CR380958_129(CR380958|pid:none) Candida glabrata strain CBS138 c... 50 1e-04
CR382139_212(CR382139|pid:none) Debaryomyces hansenii strain CBS... 43 1e-04
EF082581_1(EF082581|pid:none) Picea sitchensis clone WS0297_J10 ... 49 2e-04
CT005270_227(CT005270|pid:none) Leishmania major strain Friedlin... 49 2e-04
FN392319_936(FN392319|pid:none) Pichia pastoris GS115 chromosome... 49 2e-04
AE016819_301(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 49 3e-04
CU928169_660(CU928169|pid:none) Kluyveromyces thermotolerans str... 49 3e-04
CU928176_159(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 47 8e-04
AM494971_438(AM494971|pid:none) Leishmania braziliensis chromoso... 39 0.001
(Q6PHF0) RecName: Full=Charged multivesicular body protein 1a; A... 46 0.001
CP001576_212(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 46 0.002
AB251865_1(AB251865|pid:none) Aspergillus oryzae Aovps24 gene fo... 46 0.002
AK302055_1(AK302055|pid:none) Homo sapiens cDNA FLJ57657 complet... 46 0.002
(P69771) RecName: Full=Vacuolar protein-sorting-associated prote... 45 0.004
S78566(S78566)FTI1 protein - yeast (Saccharomyces cerevisiae) 45 0.004
AY814098_1(AY814098|pid:none) Schistosoma japonicum SJCHGC06933 ... 45 0.004
AY223258_1(AY223258|pid:none) Schistosoma japonicum clone ZZD443... 44 0.009
BC067665_1(BC067665|pid:none) Danio rerio chromatin modifying pr... 43 0.012
FN357440_32(FN357440|pid:none) Schistosoma mansoni genome sequen... 42 0.021
(Q6CJL0) RecName: Full=Vacuolar-sorting protein SNF7; AltName: F... 37 0.027
AP004299_9(AP004299|pid:none) Oryza sativa Japonica Group genomi... 42 0.035
AL445066_248(AL445066|pid:none) Thermoplasma acidophilum complet... 42 0.035
AY811600_1(AY811600|pid:none) Schistosoma japonicum SJCHGC02210 ... 42 0.035
AY223428_1(AY223428|pid:none) Schistosoma japonicum clone ZZZ394... 42 0.035
(Q96FZ7) RecName: Full=Charged multivesicular body protein 6; Al... 40 0.13
AK021811_1(AK021811|pid:none) Homo sapiens cDNA FLJ11749 fis, cl... 40 0.13
(Q5R861) RecName: Full=Charged multivesicular body protein 6; Al... 40 0.13
AK223187_1(AK223187|pid:none) Homo sapiens mRNA for hypothetical... 39 0.23
BT046538_1(BT046538|pid:none) Salmo salar clone ssal-eve-552-214... 39 0.23
CR954214_322(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 39 0.30
BT040698_1(BT040698|pid:none) Zea mays full-length cDNA clone ZM... 39 0.30
CU640366_246(CU640366|pid:none) Podospora anserina genomic DNA c... 38 0.39
(Q9VVI9) RecName: Full=Charged multivesicular body protein 5; &... 38 0.39
(Q6FW96) RecName: Full=Vacuolar-sorting protein SNF7; AltName: F... 38 0.39
BT057148_1(BT057148|pid:none) Salmo salar clone ssal-eve-558-181... 38 0.39
AE000511_1126(AE000511|pid:none) Helicobacter pylori 26695, comp... 38 0.39
BX842681_19(BX842681|pid:none) Neurospora crassa DNA linkage gro... 38 0.51
EU441354_1(EU441354|pid:none) Xenopus borealis clone Chmp5.a chr... 37 0.66
BT082925_1(BT082925|pid:none) Anoplopoma fimbria clone afim-evh-... 37 0.87
BT056720_1(BT056720|pid:none) Salmo salar clone ssal-eve-507-009... 37 0.87
BT073142_1(BT073142|pid:none) Oncorhynchus mykiss clone omyk-evn... 37 1.1
(Q6DD52) RecName: Full=Charged multivesicular body protein 5; Al... 36 1.5
EU678319_1(EU678319|pid:none) Crassostrea gigas Snf7 mRNA, compl... 36 1.5
CR548612_9(CR548612|pid:none) Paramecium tetraurelia macronuclea... 36 1.5
FJ932818_1(FJ932818|pid:none) Solanum quitoense clone 04T142-1 A... 36 1.9
FJ932822_1(FJ932822|pid:none) Solanum hirtum clone 120071 At2g06... 36 1.9
BT073651_1(BT073651|pid:none) Oncorhynchus mykiss clone omyk-evn... 36 1.9
AM270241_49(AM270241|pid:none) Aspergillus niger contig An11c024... 36 1.9
AE008691_1343(AE008691|pid:none) Thermoanaerobacter tengcongensi... 36 1.9
CP001072_1113(CP001072|pid:none) Helicobacter pylori Shi470, com... 35 2.5
CU633750_1713(CU633750|pid:none) Cupriavidus taiwanensis str. LM... 35 3.3
CU928179_747(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 35 3.3
(P19934) RecName: Full=Protein tolA; &AM946981_688(AM946981|pid... 35 4.3
CU928179_849(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 35 4.3
D89990_1(D89990|pid:none) Cyprinus carpio mRNA for myosin heavy ... 35 4.3
CP000038_649(CP000038|pid:none) Shigella sonnei Ss046, complete ... 35 4.3
AB126174_1(AB126174|pid:none) Lethenteron japonicum LjMyHC2 mRNA... 35 4.3
CP000083_3730(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 35 4.3
CP000946_2855(CP000946|pid:none) Escherichia coli ATCC 8739, com... 35 4.3
AB126173_1(AB126173|pid:none) Lethenteron japonicum LjMyHC1 mRNA... 35 4.3
CP001173_1063(CP001173|pid:none) Helicobacter pylori G27, comple... 35 4.3
CP000800_731(CP000800|pid:none) Escherichia coli E24377A, comple... 35 4.3
BT079989_1(BT079989|pid:none) Esox lucius clone eluc-evq-537-126... 34 5.6
D89991_1(D89991|pid:none) Cyprinus carpio mRNA for myosin heavy ... 34 5.6
D50475_1(D50475|pid:none) Cyprinus carpio mRNA for myosin heavy ... 34 5.6
CU530419_2(CU530419|pid:none) Zebrafish DNA sequence from clone ... 34 7.3
CP000240_1850(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 34 7.3
AE005174_775(AE005174|pid:none) Escherichia coli O157:H7 EDL933,... 34 7.3
AK341009_1(AK341009|pid:none) Acyrthosiphon pisum ACYPI001352 mR... 34 7.3
CR382122_47(CR382122|pid:none) Kluyveromyces lactis strain NRRL ... 34 7.3
AY811506_1(AY811506|pid:none) Schistosoma japonicum clone SJCHGC... 34 7.3
AB258227_1(AB258227|pid:none) Oryzias latipes gene for fast skel... 33 9.6
BC043837_1(BC043837|pid:none) Xenopus laevis similar to calcium ... 33 9.6
BC038345_1(BC038345|pid:none) Mus musculus structural maintenanc... 33 9.6
AF335500_1(AF335500|pid:none) Physarum polycephalum major plasmo... 33 9.6
AM920427_865(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 33 9.6
BC078088_1(BC078088|pid:none) Xenopus laevis similar to calcium ... 33 9.6
CP000867_1265(CP000867|pid:none) Methanococcus maripaludis C6, c... 33 9.6
BC093532_1(BC093532|pid:none) Xenopus laevis similar to calcium ... 33 9.6

>AM425689_1(AM425689|pid:none) Vitis vinifera contig VV78X267041.3,
whole genome shotgun sequence.
Length = 226

Score = 189 bits (479), Expect(2) = 2e-59
Identities = 93/133 (69%), Positives = 116/133 (87%)
Frame = +1

Query: 190 FLFGKQKTPKEVLRENQRNLNKSMREIDRERVALQNQEKKIILDIKKMAKQGQMNSAKIM 369
FLFGK+KTP E+LREN+R L+KS+REI+RER LQ QEKK+I++IKK AKQGQM + K+M
Sbjct: 3 FLFGKKKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLIVEIKKSAKQGQMGAVKVM 62

Query: 370 AKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQAMAEAMKGVTKAMITMNRQMNLPQF 549
AKDL+RTR+ I+KFY++K+QLQ V+LRIQTL+STQAM +AMKGVTKAM MNRQMNLP
Sbjct: 63 AKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGQAMKGVTKAMGQMNRQMNLPSL 122

Query: 550 TKIMMEFEQQSDK 588
KIM EFE+Q++K
Sbjct: 123 QKIMQEFERQNEK 135

Score = 64.3 bits (155), Expect(2) = 2e-59
Identities = 29/62 (46%), Positives = 48/62 (77%)
Frame = +2

Query: 590 KMDMKEEMMNDTMDQVMEQDGEEEQSQEILNQVLDEIGIDLASQLVDAPTTVGTSVASKH 769
KM+M E+M D +D +E D EEE+++E+++QVLDEIGID+ S+L++AP+ + A+K+
Sbjct: 135 KMEMTMEVMGDAVDDALEGDEEEEETEELVSQVLDEIGIDIKSELLNAPSGAVAAPAAKN 194

Query: 770 QV 775
+V
Sbjct: 195 KV 196

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 916,762,322
Number of extensions: 13167106
Number of successful extensions: 39783
Number of sequences better than 10.0: 240
Number of HSP's gapped: 39673
Number of HSP's successfully gapped: 363
Length of query: 289
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 162
Effective length of database: 646,092,785
Effective search space: 104667031170
Effective search space used: 104667031170
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.43 gvh: 0.09 alm: 0.54 top: 0.53 tms: 0.00 mit: 0.22 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: nuclear
28.0 %: cytoplasmic
4.0 %: vacuolar
4.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U05205-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0