Contig-U05175-1
Contig ID Contig-U05175-1
Contig update 2002. 9.13
Contig sequence
>Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Contig-U05175-1Q.Seq.d
GTGGTAGTGGTAGTGGTAGTGGTAGTGGATCCAATACTAGAAATCCAGTT
GTGTTGGGTGATTTTGGCTGTGCCAGGAAAATGGACGTTCCAATTCGTTT
ATGTGATACAAATGGTCACGAAAATTACAAATCACTTGAAAGATACTGGG
ATTACAATCAATGTAGAATCAAAACCACATCCTTTATTCGAGATAATGAA
GATATCTTTTCACTTGGTCTAATATTTGAAATGCTATTAACATTTGTTCA
TCCAGGTACAACTCTATTTGAACAAAATGTATTGTTCCTCTTGAAATTTC
ATGGTATTGAAATTGTGCCAACTGGTGGCCCTAACAACAATTATACAACA
TTGAAAGTTGCATTTTCAAATGATATTAGAAACTTTACATCAAATACTCA
ATTCACTACAATTACATTTGATTCAAAGTTTAACCCAATCATTTCACAAA
TTATTAATTACATTCAATACTATAGAAATAGACCAAATTCTAGTCAAGTA
TTGGAATCATTAATCAATAATCATCAATATTCATTAAATAATAATCTACC
ACCAATTTTTGTTGAAAATCCAAATGATAAATATGAACCAGTAGATGCCA
ACTCTTCAGATGACTCATCTGTCCTTTACCATTCTTATGATAGCTCTGAT
GCTGATGATACTCCTTACTCCTTCTTTTGAAATTACGATTACTCGTGATA
ATTTCAATCAAAGTATAAATCATCAGTGAACGCACAATAATTTTAATTAT
ATTATTATTATTATTATTATCTCTTAGTAATACTTTTTGTACCATTTCAA
ATTTTTTAAATAAAACTGAATCAAATTAAAAAAAAA

Gap no gap
Contig length 836
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 5732276
End point 5733115
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U05175
List of clone(s)

est1=SSF855E,1,830
est2=VSJ224F,327,830
est3=VSJ224Z,327,809
Translated Amino Acid sequence
GSGSGSGSGSNTRNPVVLGDFGCARKMDVPIRLCDTNGHENYKSLERYWDYNQCRIKTTS
FIRDNEDIFSLGLIFEMLLTFVHPGTTLFEQNVLFLLKFHGIEIVPTGGPNNNYTTLKVA
FSNDIRNFTSNTQFTTITFDSKFNPIISQIINYIQYYRNRPNSSQVLESLINNHQYSLNN
NLPPIFVENPNDKYEPVDANSSDDSSVLYHSYDSSDADDTPYSFF*nydys**fqskyks
svnaq*f*lyyyyyyyllvilfvpfqif*iklnqikkk


Translated Amino Acid sequence (All Frames)
Frame A:
vvvvvvvvvdpileiqlcwvilavpgkwtfqfvyviqmvtkitnhlkdtgitinveskph
plfeimkisfhlv*ylkcy*hlfiqvqlylnkmycss*nfmvlklcqlvalttiiqh*kl
hfqmiletlhqilnslqlhliqsltqsfhkllitfntieidqilvkywnh*siiinih*i
iiyhqfllkiqminmnq*mptlqmthlsftilmialmlmilltpsfeititrdnfnqsin
hq*thnnfnyiiiiiiis**yflyhfkffk*n*iklkk


Frame B:
w*w*w*w*wiqy*ksscvg*fwlcqengrsnsfm*ykwsrklqit*kilglqsm*nqnhi
lysr**rylftwsni*nainicssrynsi*tkcivpleiswy*ncanwwp*qqlyniesc
ifk*y*klyikysihynyi*fkv*pnhftny*lhsil*k*tkf*ssigiinq*ssifik*
*sttnfc*ksk**i*tsrcqlfr*licplpfl**l*c**yslllllklrllviisikv*i
isertiiliillllllslsntfctisnflnktesn*kk


Frame C:
GSGSGSGSGSNTRNPVVLGDFGCARKMDVPIRLCDTNGHENYKSLERYWDYNQCRIKTTS
FIRDNEDIFSLGLIFEMLLTFVHPGTTLFEQNVLFLLKFHGIEIVPTGGPNNNYTTLKVA
FSNDIRNFTSNTQFTTITFDSKFNPIISQIINYIQYYRNRPNSSQVLESLINNHQYSLNN
NLPPIFVENPNDKYEPVDANSSDDSSVLYHSYDSSDADDTPYSFF*nydys**fqskyks
svnaq*f*lyyyyyyyllvilfvpfqif*iklnqikkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05175-1 (Contig-U05175-1Q)
/CSM_Contig/Contig-U05175-1Q.Seq.d
(836 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Conti... 1477 0.0
Contig-U11970-1 (Contig-U11970-1Q) /CSM_Contig/Conti... 56 6e-08
Contig-U08227-1 (Contig-U08227-1Q) /CSM_Contig/Conti... 56 6e-08
Contig-U12561-1 (Contig-U12561-1Q) /CSM_Contig/Conti... 52 1e-06
Contig-U02748-1 (Contig-U02748-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U14059-1 (Contig-U14059-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U12001-1 (Contig-U12001-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U09546-1 (Contig-U09546-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U00319-1 (Contig-U00319-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U14566-1 (Contig-U14566-1Q) /CSM_Contig/Conti... 46 6e-05

>Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Contig-U05175-1Q.Seq.d
Length = 836

Score = 1477 bits (745), Expect = 0.0
Identities = 745/745 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtggatccaatactagaaatccagttgtgttgggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtagtggtagtggtagtggtagtggatccaatactagaaatccagttgtgttgggtg 60


Query: 61 attttggctgtgccaggaaaatggacgttccaattcgtttatgtgatacaaatggtcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attttggctgtgccaggaaaatggacgttccaattcgtttatgtgatacaaatggtcacg 120


Query: 121 aaaattacaaatcacttgaaagatactgggattacaatcaatgtagaatcaaaaccacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaattacaaatcacttgaaagatactgggattacaatcaatgtagaatcaaaaccacat 180


Query: 181 cctttattcgagataatgaagatatcttttcacttggtctaatatttgaaatgctattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cctttattcgagataatgaagatatcttttcacttggtctaatatttgaaatgctattaa 240


Query: 241 catttgttcatccaggtacaactctatttgaacaaaatgtattgttcctcttgaaatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catttgttcatccaggtacaactctatttgaacaaaatgtattgttcctcttgaaatttc 300


Query: 301 atggtattgaaattgtgccaactggtggccctaacaacaattatacaacattgaaagttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggtattgaaattgtgccaactggtggccctaacaacaattatacaacattgaaagttg 360


Query: 361 cattttcaaatgatattagaaactttacatcaaatactcaattcactacaattacatttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cattttcaaatgatattagaaactttacatcaaatactcaattcactacaattacatttg 420


Query: 421 attcaaagtttaacccaatcatttcacaaattattaattacattcaatactatagaaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attcaaagtttaacccaatcatttcacaaattattaattacattcaatactatagaaata 480


Query: 481 gaccaaattctagtcaagtattggaatcattaatcaataatcatcaatattcattaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaccaaattctagtcaagtattggaatcattaatcaataatcatcaatattcattaaata 540


Query: 541 ataatctaccaccaatttttgttgaaaatccaaatgataaatatgaaccagtagatgcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ataatctaccaccaatttttgttgaaaatccaaatgataaatatgaaccagtagatgcca 600


Query: 601 actcttcagatgactcatctgtcctttaccattcttatgatagctctgatgctgatgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actcttcagatgactcatctgtcctttaccattcttatgatagctctgatgctgatgata 660


Query: 661 ctccttactccttcttttgaaattacgattactcgtgataatttcaatcaaagtataaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctccttactccttcttttgaaattacgattactcgtgataatttcaatcaaagtataaat 720


Query: 721 catcagtgaacgcacaataatttta 745
|||||||||||||||||||||||||
Sbjct: 721 catcagtgaacgcacaataatttta 745


Score = 113 bits (57), Expect = 3e-25
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 771 ctcttagtaatactttttgtaccatttcaaattttttaaataaaactgaatcaaatt 827
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctcttagtaatactttttgtaccatttcaaattttttaaataaaactgaatcaaatt 827


>Contig-U11970-1 (Contig-U11970-1Q) /CSM_Contig/Contig-U11970-1Q.Seq.d
Length = 1141

Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtgg 28
||||||||||||||||||||||||||||
Sbjct: 523 gtggtagtggtagtggtagtggtagtgg 550


Score = 54.0 bits (27), Expect = 3e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 2 tggtagtggtagtggtagtggtagtgg 28
|||||||||||||||||||||||||||
Sbjct: 518 tggtagtggtagtggtagtggtagtgg 544


>Contig-U08227-1 (Contig-U08227-1Q) /CSM_Contig/Contig-U08227-1Q.Seq.d
Length = 1211

Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtgg 28
||||||||||||||||||||||||||||
Sbjct: 793 gtggtagtggtagtggtagtggtagtgg 820


Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtgg 28
||||||||||||||||||||||||||||
Sbjct: 775 gtggtagtggtagtggtagtggtagtgg 802


Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtgg 28
||||||||||||||||||||||||||||
Sbjct: 781 gtggtagtggtagtggtagtggtagtgg 808


Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtgg 28
||||||||||||||||||||||||||||
Sbjct: 787 gtggtagtggtagtggtagtggtagtgg 814


Score = 56.0 bits (28), Expect = 6e-08
Identities = 28/28 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggtagtgg 28
||||||||||||||||||||||||||||
Sbjct: 799 gtggtagtggtagtggtagtggtagtgg 826


Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1 gtggtagtggtagtggtagtggt 23
|||||||||||||||||||||||
Sbjct: 805 gtggtagtggtagtggtagtggt 827


Score = 32.2 bits (16), Expect = 0.92
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 14 tggtagtggtagtgga 29
||||||||||||||||
Sbjct: 50 tggtagtggtagtgga 65


Score = 30.2 bits (15), Expect = 3.6
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 8 tggtagtggtagtgg 22
|||||||||||||||
Sbjct: 50 tggtagtggtagtgg 64


Score = 30.2 bits (15), Expect = 3.6
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 2 tggtagtggtagtgg 16
|||||||||||||||
Sbjct: 50 tggtagtggtagtgg 64


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,486
Number of Sequences: 6905
Number of extensions: 14486
Number of successful extensions: 2061
Number of sequences better than 10.0: 241
length of query: 836
length of database: 5,674,871
effective HSP length: 16
effective length of query: 820
effective length of database: 5,564,391
effective search space: 4562800620
effective search space used: 4562800620
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 7.12
Homology vs DNA
Query= Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Contig-U05175-1Q.Seq.d
(836 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C84799) Dictyostelium discoideum slug cDNA, clone SSF855. 882 0.0 3
(AU269598) Dictyostelium discoideum vegetative cDNA clone:VS... 674 0.0 3
(AU269599) Dictyostelium discoideum vegetative cDNA clone:VS... 674 0.0 3
(AU073063) Dictyostelium discoideum slug cDNA, clone SSF855. 432 e-122 2
(AB197011) Haliotis discus hannai DNA, microsatellite Hdh61. 60 1e-04 1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 54 2e-04 8
(AC176848) Strongylocentrotus purpuratus clone R3-1110H21, W... 56 3e-04 3
(AM446308) Vitis vinifera, whole genome shotgun sequence, co... 50 6e-04 4
(CT025668) Mouse DNA sequence from clone RP24-370M11 on chro... 58 6e-04 1
(AC107850) Mus musculus chromosome 17, clone RP23-450G2, com... 58 6e-04 1
(AC181279) Strongylocentrotus purpuratus clone R3-4015J17, W... 58 6e-04 1
(AC180305) Strongylocentrotus purpuratus clone R3-3119N05, W... 58 6e-04 1
(AC179960) Strongylocentrotus purpuratus clone R3-20J22, WOR... 58 6e-04 1
(AC179039) Strongylocentrotus purpuratus clone R3-4005B22, W... 58 6e-04 1
(AZ861188) 2M0167H01R Mouse 10kb plasmid UUGC1M library Mus ... 58 6e-04 1
(AZ127274) OSJNBb0084H14r CUGI Rice BAC Library (EcoRI) Oryz... 58 6e-04 1
(DH487787) Monosiga ovata DNA, fosmid clone: MOF-045N10, gen... 58 6e-04 1
(DE237939) Trifolium pratense DNA, clone:RCG34153. 58 6e-04 1
(DE237740) Trifolium pratense DNA, clone:RCG33758. 58 6e-04 1
(DE236575) Trifolium pratense DNA, clone:RCG32054. 58 6e-04 1
(DE236557) Trifolium pratense DNA, clone:RCG32019. 58 6e-04 1
(EK191781) 1095460021551 Global-Ocean-Sampling_GS-31-01-01-1... 56 6e-04 2
(BV004411) S208P6640RH3.T0 129S1/SvImJ Mus musculus STS geno... 56 0.002 1
(CU207379) Mouse DNA sequence from clone CH29-505C15 on chro... 56 0.002 1
(CT025625) Mouse DNA sequence from clone RP23-449N15 on chro... 56 0.002 1
(CT010470) Mouse DNA sequence from clone RP23-313D12 on chro... 56 0.002 1
(CT009711) Mouse DNA sequence from clone RP23-128L22 on chro... 56 0.002 1
(AL929275) Mouse DNA sequence from clone RP23-65P13 on chrom... 56 0.002 1
(AL928659) Mouse DNA sequence from clone RP23-271B13 on chro... 56 0.002 1
(AL844177) Mouse DNA sequence from clone RP23-414O19 on chro... 56 0.002 1
(AJ403606) M.musculus DNA for GFAP-binding fragment GFAPD10. 56 0.002 1
(AC167021) Mus musculus BAC clone RP23-152D8 from chromosome... 56 0.002 1
(AC161520) Mus musculus chromosome 7, clone RP24-282D19, com... 56 0.002 1
(AC160969) Mus musculus BAC clone RP24-422L17 from chromosom... 56 0.002 1
(AC156279) Mus musculus 6 BAC RP24-244D20 (Roswell Park Canc... 56 0.002 1
(AC156033) Mus musculus BAC clone RP23-377G8 from chromosome... 56 0.002 1
(AC154842) Mus musculus BAC clone RP23-55C11 from chromosome... 56 0.002 1
(AC154720) Mus musculus BAC clone RP24-371C21 from chromosom... 56 0.002 1
(AC154355) Mus musculus BAC clone RP23-220N4 from 13, comple... 56 0.002 1
(AC154204) Mus musculus BAC clone RP24-393D5 from chromosome... 56 0.002 1
(AC153993) Mus musculus 6 BAC RP24-568N16 (Roswell Park Canc... 56 0.002 1
(AC153839) Mus musculus 6 BAC RP23-93A21 (Roswell Park Cance... 56 0.002 1
(AC153838) Mus musculus 6 BAC RP23-82B24 (Roswell Park Cance... 56 0.002 1
(AC153512) Mus musculus 10 BAC RP23-18K14 (Roswell Park Canc... 56 0.002 1
(AC140337) Mus musculus BAC clone RP23-238H7 from 1, complet... 56 0.002 1
(AC136018) Mus musculus BAC clone RP24-125E6 from chromosome... 56 0.002 1
(AC132435) Mus musculus BAC clone RP23-223L12 from 10, compl... 56 0.002 1
(AC130716) Mus musculus BAC clone RP23-463B12 from 3, comple... 56 0.002 1
(AC125395) Mus musculus BAC clone RP23-213J1 from chromosome... 56 0.002 1
(AC122923) Mus musculus BAC clone RP23-36G5 from 10, complet... 56 0.002 1
(AC118003) Mus musculus chromosome 5, clone RP23-146G20, com... 56 0.002 1
(AC117192) Mus musculus BAC clone RP23-77A18 from 2, complet... 56 0.002 1
(AC116815) Mus musculus chromosome 5, clone RP24-357H22, com... 56 0.002 1
(AC115742) Mus musculus chromosome 7, clone RP23-477E13, com... 56 0.002 1
(AC115020) Mus musculus chromosome 1, clone RP24-231D14, com... 56 0.002 1
(AC114593) Mus musculus chromosome 14, clone RP23-44B17, com... 56 0.002 1
(AC110551) Mus musculus chromosome 7, clone RP23-245P16, com... 56 0.002 1
(AC197452) MACACA MULATTA BAC clone CH250-359J10 from chromo... 56 0.002 1
(FN392322) Pichia pastoris GS115 chromosome 4, complete sequ... 56 0.002 1
(FM992695) Candida dubliniensis CD36 chromosome R, complete ... 56 0.002 1
(EU328294) Schiedea adamantis microsatellite SA31 sequence. 56 0.002 1
(EU094835) Humulus lupulus clone ACC2-E14-4 microsatellite s... 56 0.002 1
(BX294013) Neurospora crassa DNA linkage group V Cosmid cont... 56 0.002 1
(AY362701) Pichia pastoris aspartic protease yapsin 1 (YPS1)... 56 0.002 1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 56 0.002 1
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN... 56 0.002 1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 56 0.002 1
(AP007171) Aspergillus oryzae RIB40 genomic DNA, SC011. 56 0.002 1
(AP007167) Aspergillus oryzae RIB40 genomic DNA, SC020. 56 0.002 1
(AP003241) Oryza sativa Japonica Group genomic DNA, chromoso... 56 0.002 1
(AL732376) Oryza sativa chromosome 12, . BAC OSJNBa0086B10 o... 56 0.002 1
(AC098571) Oryza sativa Japonica Group chromosome 5 clone OJ... 56 0.002 1
(EA703412) Sequence 82291 from patent US 7365185. 56 0.002 1
(EA700756) Sequence 79635 from patent US 7365185. 56 0.002 1
(EA687727) Sequence 66606 from patent US 7365185. 56 0.002 1
(AR545847) Sequence 978 from patent US 6747137. 56 0.002 1
(BX538353) Cryptosporidium parvum chromosome 6, complete seq... 56 0.002 1
(AY764183) Aplysia californica syntaxin mRNA, complete cds. 56 0.002 1
(AY484460) Dictyostelium discoideum kinesin family member 3 ... 56 0.002 1
(AY392443) Dictyostelium discoideum possible endotoxin gene,... 56 0.002 1
(AY162212) Dictyostelium discoideum kinesin 1 gene, partial ... 56 0.002 1
(AF024654) Dictyostelium discoideum hybrid histidine kinase ... 56 0.002 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 56 0.002 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 56 0.002 1
(AC162362) Mus musculus chromosome 5 clone RP23-24M15 map 5,... 56 0.002 1
(AC157579) Mus musculus chromosome 1 clone RP23-14E16 map 1,... 56 0.002 1
(AC156547) Mus musculus chromosome 15 clone RP24-74I19 map 1... 56 0.002 1
(AC135039) Rattus norvegicus clone CH230-178I12, WORKING DRA... 56 0.002 1
(AC129398) Rattus norvegicus clone CH230-6C6, WORKING DRAFT ... 56 0.002 1
(AC128866) Rattus norvegicus clone CH230-108O23, *** SEQUENC... 56 0.002 1
(AC126652) Rattus norvegicus clone CH230-55K6, *** SEQUENCIN... 56 0.002 1
(AC125299) Rattus norvegicus clone CH230-502C11, WORKING DRA... 56 0.002 1
(AC119818) Mus musculus clone RP23-104A22, *** SEQUENCING IN... 56 0.002 1
(AC119130) Rattus norvegicus clone CH230-414I23, *** SEQUENC... 56 0.002 1
(AC118410) Rattus norvegicus clone CH230-218N15, *** SEQUENC... 56 0.002 1
(AC113811) Rattus norvegicus clone CH230-216D16, *** SEQUENC... 56 0.002 1
(AC111403) Rattus norvegicus clone CH230-95P17, WORKING DRAF... 56 0.002 1
(AC111350) Rattus norvegicus clone CH230-157E18, WORKING DRA... 56 0.002 1
(AC106181) Rattus norvegicus clone CH230-116O11, *** SEQUENC... 56 0.002 1
(AC103123) Rattus norvegicus clone CH230-226B23, WORKING DRA... 56 0.002 1
(AC098951) Rattus norvegicus clone CH230-173E15, WORKING DRA... 56 0.002 1
(AC097195) Rattus norvegicus clone CH230-190H11, *** SEQUENC... 56 0.002 1
(AC095424) Rattus norvegicus clone CH230-7A8, *** SEQUENCING... 56 0.002 1
(AL513006) Oryza sativa chromosome 12 ***SEQUENCING IN PROGR... 56 0.002 1
(AC234603) Tupaia belangeri clone CH275-376N22, WORKING DRAF... 56 0.002 1
(AC215175) Zea mays chromosome 3 clone CH201-97G13; ZMMBBc00... 56 0.002 1
(AC214121) Zea mays chromosome 2 clone CH201-145O9; ZMMBBc01... 56 0.002 1
(AC202150) Zea mays chromosome 1 clone ZMMBBb-320G12; ZMMBBb... 56 0.002 1
(AC201189) Strongylocentrotus purpuratus clone R3-15A6, WORK... 56 0.002 1
(AC201183) Strongylocentrotus purpuratus clone R3-14O10, WOR... 56 0.002 1
(AC184882) Strongylocentrotus purpuratus clone R3-1015A21, W... 56 0.002 1
(AC184237) Strongylocentrotus purpuratus clone R3-3061A4, WO... 56 0.002 1
(AC184210) Strongylocentrotus purpuratus clone R3-25L6, WORK... 56 0.002 1
(AC181799) Strongylocentrotus purpuratus clone R3-1027M19, W... 56 0.002 1
(AC181787) Strongylocentrotus purpuratus clone R3-1030C18, W... 56 0.002 1
(AC181725) Strongylocentrotus purpuratus clone R3-1039D03, W... 56 0.002 1
(AC181523) Strongylocentrotus purpuratus clone R3-64O23, WOR... 56 0.002 1
(AC181364) Strongylocentrotus purpuratus clone R3-113H02, WO... 56 0.002 1
(AC181102) Strongylocentrotus purpuratus clone R3-3047K03, W... 56 0.002 1
(AC181062) Strongylocentrotus purpuratus clone R3-3050B8, WO... 56 0.002 1
(AC181014) Strongylocentrotus purpuratus clone R3-3055G15, W... 56 0.002 1
(AC180923) Strongylocentrotus purpuratus clone R3-3063O14, W... 56 0.002 1
(AC180852) Strongylocentrotus purpuratus clone R3-3068H12, W... 56 0.002 1
(AC180630) Strongylocentrotus purpuratus clone R3-3090I22, W... 56 0.002 1
(AC180587) Strongylocentrotus purpuratus clone R3-3094G12, W... 56 0.002 1
(AC180528) Strongylocentrotus purpuratus clone R3-3016G12, W... 56 0.002 1
(AC179911) Strongylocentrotus purpuratus clone R3-1003F14, W... 56 0.002 1
(AC179790) Strongylocentrotus purpuratus clone R3-1015B13, W... 56 0.002 1
(AC179758) Strongylocentrotus purpuratus clone R3-1017K12, W... 56 0.002 1
(AC179360) Strongylocentrotus purpuratus clone R3-59G20, WOR... 56 0.002 1
(AC179357) Strongylocentrotus purpuratus clone R3-59F5, WORK... 56 0.002 1
(AC179091) Strongylocentrotus purpuratus clone R3-4010A15, W... 56 0.002 1
(AC178824) Strongylocentrotus purpuratus clone R3-29G2, WORK... 56 0.002 1
(AC178238) Strongylocentrotus purpuratus clone R3-3086D15, W... 56 0.002 1
(AC178177) Strongylocentrotus purpuratus clone R3-1116N12, W... 56 0.002 1
(AC177726) Strongylocentrotus purpuratus clone R3-1008P4, WO... 56 0.002 1
(AC177654) Strongylocentrotus purpuratus clone R3-3057A5, WO... 56 0.002 1
(AC177346) Strongylocentrotus purpuratus clone R3-46P4, WORK... 56 0.002 1
(AC177333) Strongylocentrotus purpuratus clone R3-1032L15, W... 56 0.002 1
(AC177271) Strongylocentrotus purpuratus clone R3-43O10, WOR... 56 0.002 1
(AC177092) Strongylocentrotus purpuratus clone R3-4012F20, W... 56 0.002 1
(AC177032) Strongylocentrotus purpuratus clone R3-38D6, WORK... 56 0.002 1
(AC176867) Strongylocentrotus purpuratus clone R3-31D6, WORK... 56 0.002 1
(AC176851) Strongylocentrotus purpuratus clone R3-3120J18, W... 56 0.002 1
(AC176776) Strongylocentrotus purpuratus clone R3-3104K2, WO... 56 0.002 1
(AC176229) Strongylocentrotus purpuratus clone R3-3063A10, W... 56 0.002 1
(AC176035) Strongylocentrotus purpuratus clone R3-18I5, WORK... 56 0.002 1
(AC175949) Strongylocentrotus purpuratus clone R3-3038B20, W... 56 0.002 1
(AC174135) Strongylocentrotus purpuratus clone R3-1004A20, W... 56 0.002 1
(AC173635) Strongylocentrotus purpuratus clone R3-3028I10, *... 56 0.002 1
(AC172308) Strongylocentrotus purpuratus clone R3-14N10, WOR... 56 0.002 1
(AC168648) Strongylocentrotus purpuratus clone R3-3017J8, WO... 56 0.002 1
(AC168596) Strongylocentrotus purpuratus clone R3-3065C11, W... 56 0.002 1
(AC168547) Strongylocentrotus purpuratus clone R3-3091I15, W... 56 0.002 1
(AC168542) Strongylocentrotus purpuratus clone R3-3091L20, W... 56 0.002 1
(AC168449) Strongylocentrotus purpuratus clone R3-38N3, WORK... 56 0.002 1
(BH094533) RPCI-24-357H22.TV RPCI-24 Mus musculus genomic cl... 56 0.002 1
(AZ082714) RPCI-23-30L8.TV RPCI-23 Mus musculus genomic clon... 56 0.002 1
(FT014742) Rattus norvegicus DNA, BAC clone: RNB2-021P10, 5'... 56 0.002 1
(AQ449579) 500002B05.x2 CpIOWAM13mp18gDNA1 Cryptosporidium p... 56 0.002 1
(FH458869) CHO_OF4929xm01r1.ab1 CHO_OF4 Nicotiana tabacum ge... 56 0.002 1
(FH348014) CHO_OF4264xc19f1.ab1 CHO_OF4 Nicotiana tabacum ge... 56 0.002 1
(FH141844) CHO_OF3711xc17r1.ab1 CHO_OF3 Nicotiana tabacum ge... 56 0.002 1
(ER280954) 1095595489514 Global-Ocean-Sampling_GS-33-01-01-1... 56 0.002 1
(ER197365) 1095522321067 Global-Ocean-Sampling_GS-33-01-01-1... 56 0.002 1
(ER098727) 1095521889033 Global-Ocean-Sampling_GS-33-01-01-1... 56 0.002 1
(EK749987) 1093017015792 Global-Ocean-Sampling_GS-33-01-01-1... 56 0.002 1
(EK646331) 1092351260866 Global-Ocean-Sampling_GS-33-01-01-1... 56 0.002 1
(EK495661) 1095505156535 Global-Ocean-Sampling_GS-32-01-01-1... 56 0.002 1
(EK480279) 1095469513030 Global-Ocean-Sampling_GS-32-01-01-1... 56 0.002 1
(EJ895086) 1093018463421 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.002 1
(EJ824400) 1093017553441 Global-Ocean-Sampling_GS-30-02-01-1... 56 0.002 1
(EJ498147) 1095403590145 Global-Ocean-Sampling_GS-28-01-01-1... 56 0.002 1
(EJ338542) 1092963498076 Global-Ocean-Sampling_GS-28-01-01-1... 56 0.002 1
(EJ311527) 1095403004024 Global-Ocean-Sampling_GS-27-01-01-1... 56 0.002 1
(EJ230854) 1092402591175 Global-Ocean-Sampling_GS-27-01-01-1... 56 0.002 1
(DH495178) Monosiga ovata DNA, fosmid clone: MOF-058P17, gen... 56 0.002 1
(DH490983) Monosiga ovata DNA, fosmid clone: MOF-051F21, gen... 56 0.002 1
(DH482896) Monosiga ovata DNA, fosmid clone: MOF-037J06, gen... 56 0.002 1
(DH480380) Monosiga ovata DNA, fosmid clone: MOF-033C06, gen... 56 0.002 1
(DH475704) Monosiga ovata DNA, fosmid clone: MOF-024N13, gen... 56 0.002 1
(DH471948) Monosiga ovata DNA, fosmid clone: MOF-018G13, gen... 56 0.002 1
(DH435083) Macropus eugenii DNA with T7 primer, fosmid clone... 56 0.002 1
(DE846921) Macropus eugenii DNA, BAC clone: MEB1-008K11_R, 3... 56 0.002 1
(CZ289679) cp65f01.r Candida parapsilosis Random Genomic Lib... 56 0.002 1
(CR242702) Reverse strand read from insert in 5'HPRT inserti... 56 0.002 1
(CL953844) OsIRUA004221 Oryza sativa Express Library Oryza s... 56 0.002 1
(AG518059) Mus musculus molossinus DNA, clone:MSMg01-424A18.... 56 0.002 1
(BZ685299) PUBBC34TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 56 0.002 1
(BZ676952) PUBBH34TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 56 0.002 1
(BZ673615) PUBBB09TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 56 0.002 1
(BZ667212) PUBBG24TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 56 0.002 1
(EB250097) PEG003-C-032689-501 Normalized Pedal-Pleural Gang... 56 0.002 1
(DY984826) CLSS8111.b1_M11.ab1 CLS(LMS) lettuce sativa Lactu... 56 0.002 1
(DY663649) SC_CP_07_E09 SC_CP Senecio cambrensis cDNA 5', mR... 56 0.002 1
(DV450071) CV02003A2D08.f1 CV02-normalized library Manihot e... 56 0.002 1
(DT752575) EST1186424 Aquilegia cDNA library Aquilegia formo... 56 0.002 1
(DR945697) EST1137236 Aquilegia cDNA library Aquilegia formo... 56 0.002 1
(DR932385) EST1123924 Aquilegia cDNA library Aquilegia formo... 56 0.002 1
(DR915157) EST1106696 Aquilegia cDNA library Aquilegia formo... 56 0.002 1
(DC494472) Monosiga ovata cDNA, clone: MOC-064H05, 3'end. 56 0.002 1
(DC470632) Monosiga ovata cDNA, clone: MOC-030A19, 5'end. 56 0.002 1
(DC458363) Monosiga ovata cDNA, clone: MOC-012D14, 5'end. 56 0.002 1
(DB947958) Manihot esculenta mRNA, clone: CAS01_029_L02, 3'end. 56 0.002 1
(DB939913) Manihot esculenta mRNA, clone: CAS01_004_G06, 3'end. 56 0.002 1
(DB939122) Manihot esculenta mRNA, clone: CAS01_001_P01, 3'end. 56 0.002 1
(AU074886) Dictyostelium discoideum slug cDNA, clone SSM360. 56 0.002 1
(AU072716) Dictyostelium discoideum slug cDNA, clone SSA586. 56 0.002 1
(AU072417) Dictyostelium discoideum slug cDNA, clone SSE449. 56 0.002 1
(CV105487) AGENCOURT_31544685 NIH_MGC_270 Rattus norvegicus ... 56 0.002 1
(CO563147) AGENCOURT_28623036 NIH_MGC_250 Rattus norvegicus ... 56 0.002 1
(CK643687) rni.08.D17.5 MBra685 cassava lambda zap Manihot e... 56 0.002 1
(CK076299) 78497rsicen_21525.y1 Oryza sativa cv. LYP9 bootin... 56 0.002 1
(CB612962) AMGNNUC:CR2-00020-H6-A Colon Rat 2 (10398) Rattus... 56 0.002 1
(C25565) Dictyostelium discoideum slug cDNA, clone SLA429. 56 0.002 1
(BJ374789) Dictyostelium discoideum cDNA clone:ddc16e08, 3' ... 56 0.002 1
(BJ371374) Dictyostelium discoideum cDNA clone:ddc57b22, 5' ... 56 0.002 1
(BJ362519) Dictyostelium discoideum cDNA clone:ddc22p01, 5' ... 56 0.002 1
(GH610615) G1297P565FI1.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GH609690) G1297P564RC12.T0 C. parvum KSU-1 normalized sporo... 56 0.002 1
(GH608470) G1297P560RE18.T0 C. parvum KSU-1 normalized sporo... 56 0.002 1
(GH608229) G1297P558FK17.T0 C. parvum KSU-1 normalized sporo... 56 0.002 1
(GH605636) G1297P554RK8.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GH600048) G1297P536FF5.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GH599757) G1297P537FF11.T0 C. parvum KSU-1 normalized sporo... 56 0.002 1
(GH598107) G1297P534RI16.T0 C. parvum KSU-1 normalized sporo... 56 0.002 1
(GH595963) G1297P530FO17.T0 C. parvum KSU-1 normalized sporo... 56 0.002 1
(GH595312) G1297P530RC7.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GH593848) G1297P529FB7.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GH592835) G1297P525RL5.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GH588812) G1297P59RA22.T0 C. parvum KSU-1 normalized sporoz... 56 0.002 1
(GE582524) CCPU6873.b1_B16.ab1 CCP(UWX) Globe Artichoke Cyna... 56 0.002 1
(GD231321) G1045P399RD19.T1 Aplysia californica Pooled Norma... 56 0.002 1
(FG806358) K085D10 Cassava root 210-day-old plants cDNA libr... 56 0.002 1
(FG805027) K093E07 Cassava root 210-day-old plants cDNA libr... 56 0.002 1
(FG469329) 020217KAKA006075HT (KAKA) Dormant kiwifruit buds ... 56 0.002 1
(FG467374) 011203KAKA003855HT (KAKA) Dormant kiwifruit buds ... 56 0.002 1
(FG147444) AGN_RPC005xg11f1.ab1 AGN_RPC Nicotiana tabacum cD... 56 0.002 1
(FF535090) CASRA18TR CASR Manihot esculenta cDNA 3', mRNA se... 56 0.002 1
(FE756013) CAYF4751.b3 CAYF Petrolisthes cinctipes heart, wh... 56 0.002 1
(FE755923) CAYF4703.b3 CAYF Petrolisthes cinctipes heart, wh... 56 0.002 1
(FE755911) CAYF4695.b3 CAYF Petrolisthes cinctipes heart, wh... 56 0.002 1
(FE287036) CANH4023.fwd CANH_Daphnia_pulex_Log50_Library_21 ... 56 0.002 1
(FE287035) CANH4023.rev CANH_Daphnia_pulex_Log50_Library_21 ... 56 0.002 1
(EX851945) CBNC9307.fwd CBNC Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX851453) CBNC9032.rev CBNC Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX851080) CBNC8829.rev CBNC Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX844625) CBNC5488.rev CBNC Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX840347) CBNB8401.fwd CBNB Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX840346) CBNB8401.rev CBNB Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX814997) CBNA4306.rev CBNA Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX814916) CBNA4267.rev CBNA Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX810543) CBNA1506.rev CBNA Phycomyces blakesleeanus NRRL15... 56 0.002 1
(EX546335) AIAC-aaa65g02.g1 Ancylostoma_caninum_EST_Male_pSM... 56 0.002 1
(EX539812) AIAC-aaa82e06.g1 Ancylostoma_caninum_EST_Male_pSM... 56 0.002 1
(EW743048) AIAC-aaa03f04.b1 Ancylostoma_caninum_EST_Male_pSM... 56 0.002 1
(CP000082) Psychrobacter arcticus 273-4, complete genome. 56 0.002 1
(AC178739) Strongylocentrotus purpuratus clone R3-13L20, WOR... 40 0.006 2
(AC168402) Strongylocentrotus purpuratus clone R3-4002I3, WO... 52 0.006 2
(AC174194) Strongylocentrotus purpuratus clone R3-16A6, WORK... 52 0.006 2
(AC157834) Strongylocentrotus purpuratus clone R3-4002I3, WO... 52 0.006 2
(AF396747) Ictalurus punctatus myostatin gene, complete cds. 48 0.007 2
(EA072603) Sequence 30 from patent US 7183079. 48 0.008 2
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 54 0.009 1
(AM270285) Aspergillus niger contig An12c0290, complete genome. 54 0.009 1
(AC156447) Volvox carteri clone JGIAOBO-33C7, complete seque... 54 0.009 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 54 0.009 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 54 0.009 1
(AC009374) Drosophila melanogaster 3L BAC RP98-4J11 (Roswell... 54 0.009 1
(AC150001) Strongylocentrotus purpuratus clone R3-60F6, WORK... 54 0.009 1
(DQ273271) Asparagus officinalis clone B4-L7-94, *** SEQUENC... 54 0.009 1
(AC181221) Strongylocentrotus purpuratus clone R3-4009C07, W... 54 0.009 1
(AC179981) Strongylocentrotus purpuratus clone R3-18H5, WORK... 54 0.009 1
(AC177118) Strongylocentrotus purpuratus clone R3-4014D4, WO... 54 0.009 1
(AC012927) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 54 0.009 1
(EJ232181) 1092404029361 Global-Ocean-Sampling_GS-27-01-01-1... 54 0.009 1
(AM388898) Brassica oleracea var. alboglabra EST, clone AAF... 54 0.009 1
(FE672376) mh1_0017_B04 Drought-stressed chickpea leave libr... 54 0.009 1
(EY261270) BF01021B1A01.f1 Normalized subtracted keck librar... 54 0.009 1
(EX819021) CBNA6367.rev CBNA Phycomyces blakesleeanus NRRL15... 54 0.009 1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 52 0.031 17
(AL935181) Zebrafish DNA sequence from clone CH211-162K9. 52 0.036 1
(AL645783) Mouse DNA sequence from clone RP23-459H16 on chro... 52 0.036 1
(AL590625) Mouse DNA sequence from clone RP23-467M8 on chrom... 52 0.036 1
(AC140110) Mus musculus BAC clone RP23-29H6 from 6, complete... 52 0.036 1
(AC130542) Mus musculus chromosome 6 clone RP24-167F4, compl... 52 0.036 1
(AC122837) Mus musculus BAC clone RP23-189N3 from 16, comple... 52 0.036 1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 52 0.036 1
(EU744960) Cynara cardunculus clone CELMS-44 microsatellite ... 52 0.036 1
(AC149079) Medicago truncatula chromosome 8 clone mth2-75i8,... 52 0.036 1
(CS374589) Sequence 692 from Patent WO2006034879. 52 0.036 1
(AR553641) Sequence 8772 from patent US 6747137. 52 0.036 1
(U43183) Trypanosoma vivax diagnostic antigen gene, partial ... 52 0.036 1
(L25129) Trypanosoma vivax (ILDat 1.2) species-specific anti... 52 0.036 1
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 52 0.036 1
(AC009395) Drosophila melanogaster clone BACR01D01, complete... 52 0.036 1
(AC007812) Drosophila melanogaster, chromosome 3R, region 91... 52 0.036 1
(AC157150) Bos taurus clone CH240-67G17, WORKING DRAFT SEQUE... 52 0.036 1
(AC128909) Rattus norvegicus clone CH230-321C12, WORKING DRA... 52 0.036 1
(AC100459) Mus musculus clone RP23-138O24, LOW-PASS SEQUENCE... 52 0.036 1
(FJ423037) Salmo salar clone BAC 39E15, *** SEQUENCING IN PR... 52 0.036 1
(AP003645) Mus musculus genomic DNA, chromosome 16q clone:RP... 52 0.036 1
(AC205316) Zea mays chromosome 8 clone CH201-501O16; ZMMBBc0... 52 0.036 1
(AC202109) Zea mays chromosome 8 clone ZMMBBb-313K3; ZMMBBb0... 52 0.036 1
(AC201600) Strongylocentrotus purpuratus clone R3-50C18, WOR... 52 0.036 1
(AC201345) Strongylocentrotus purpuratus clone R3-16P15, WOR... 52 0.036 1
(AC184236) Strongylocentrotus purpuratus clone R3-3057P13, W... 52 0.036 1
(AC181638) Strongylocentrotus purpuratus clone R3-1103M24, W... 52 0.036 1
(AC181321) Strongylocentrotus purpuratus clone R3-115E19, WO... 52 0.036 1
(AC181168) Strongylocentrotus purpuratus clone R3-16A17, WOR... 52 0.036 1
(AC181125) Strongylocentrotus purpuratus clone R3-16I2, WORK... 52 0.036 1
(AC181045) Strongylocentrotus purpuratus clone R3-3050I12, W... 52 0.036 1
(AC178708) Strongylocentrotus purpuratus clone R3-12J4, WORK... 52 0.036 1
(AC178465) Strongylocentrotus purpuratus clone R3-113E13, WO... 52 0.036 1
(AC176866) Strongylocentrotus purpuratus clone R3-31B19, WOR... 52 0.036 1
(AC176807) Strongylocentrotus purpuratus clone R3-3109G05, W... 52 0.036 1
(AC176220) Strongylocentrotus purpuratus clone R3-3062G22, W... 52 0.036 1
(AC168612) Strongylocentrotus purpuratus clone R3-3046H17, W... 52 0.036 1
(AC018070) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 52 0.036 1
(DH502270) Monosiga ovata DNA, fosmid clone: MOF-071E23, gen... 52 0.036 1
(DH495191) Monosiga ovata DNA, fosmid clone: MOF-059A03, gen... 52 0.036 1
(DH489789) Monosiga ovata DNA, fosmid clone: MOF-049F02, gen... 52 0.036 1
(DH488845) Monosiga ovata DNA, fosmid clone: MOF-047L10, gen... 52 0.036 1
(DH481464) Monosiga ovata DNA, fosmid clone: MOF-035A21, gen... 52 0.036 1
(DH478742) Monosiga ovata DNA, fosmid clone: MOF-030F09, gen... 52 0.036 1
(DH475681) Monosiga ovata DNA, fosmid clone: MOF-024M24, gen... 52 0.036 1
(CG947644) MBENP12TR mth2 Medicago truncatula genomic clone ... 52 0.036 1
(CG745168) P038-1-A06.za Ppa EcoRI BAC Library Pristionchus ... 52 0.036 1
(BH711390) BOMMC69TR BO_2_3_KB Brassica oleracea genomic clo... 52 0.036 1
(EC853303) HDE00001292 Hyperamoeba dachnaya Non-normalized (... 52 0.036 1
(DY662038) SC_CP_03_H11 SC_CP Senecio cambrensis cDNA 5', mR... 52 0.036 1
(DT758984) EST1192833 Aquilegia cDNA library Aquilegia formo... 52 0.036 1
(DN572582) 92243685 Sea Urchin primary mesenchyme cell cDNA ... 52 0.036 1
(DC584664) Diospyros kaki cDNA, clone: KA017_B05, 5' end, ex... 52 0.036 1
(CX526709) s13dNF25G09AT072_513930 Aphid-Infected Shoots Med... 52 0.036 1
(CN883882) 010814AASB004303HT (AASB) Royal Gala 10 DAFB frui... 52 0.036 1
(CN883035) 010813AASB003592HT (AASB) Royal Gala 10 DAFB frui... 52 0.036 1
(CN881967) 010621AASB999141HT (AASB) Royal Gala 10 DAFB frui... 52 0.036 1
(CN881960) 010621AASB999130HT (AASB) Royal Gala 10 DAFB frui... 52 0.036 1
(CA922819) EST640537 MTUS Medicago truncatula cDNA clone MTU... 52 0.036 1
(BQ592758) E012124-024-028-B06-SP6 MPIZ-ADIS-024-developing ... 52 0.036 1
(BQ592626) S013686-024-028-B06-SP6R MPIZ-ADIS-024-developing... 52 0.036 1
(BJ427545) Dictyostelium discoideum cDNA clone:ddv62c20, 5' ... 52 0.036 1
(BJ326409) Dictyostelium discoideum cDNA clone:dda16j10, 5' ... 52 0.036 1
(GO303054) AHSB550.rev AHSB Teleopsis dalmanni Late larval e... 52 0.036 1
(GE547908) CCHS6767.b1_M12.ab1 CCHS Espina Barnadesia spinos... 52 0.036 1
(GE547537) CCHS6412.b1_G20.ab1 CCHS Espina Barnadesia spinos... 52 0.036 1
(GE535388) CCHS21969.b1_A21.ab1 CCHS Espina Barnadesia spino... 52 0.036 1
(FE772218) CCAG6530.g1 CCAG Petrolisthes cinctipes heart, gi... 52 0.036 1
(AC177219) Strongylocentrotus purpuratus clone R3-1034M09, W... 50 0.049 2
(AC179228) Strongylocentrotus purpuratus clone R3-1106O16, W... 38 0.088 2
(AC176720) Strongylocentrotus purpuratus clone R3-3095O12, W... 38 0.092 2
(AC175929) Strongylocentrotus purpuratus clone R3-15N9, WORK... 40 0.12 5
(CT033772) Mouse DNA sequence from clone RP23-144A16 on chro... 50 0.14 1
(CT030231) Mouse DNA sequence from clone RP24-331M15 on chro... 50 0.14 1
(AL833806) Mouse DNA sequence from clone RP23-425H11 on chro... 50 0.14 1
(AF287263) Mus musculus ATP-binding cassette 1, sub-family A... 50 0.14 1
(AC121095) Mus musculus chromosome 14, clone RP24-324H17, co... 50 0.14 1
(EU094829) Humulus lupulus clone ACC3-I1-8 microsatellite se... 50 0.14 1
(EF426734) Iris missouriensis clone 15 retrotransposon IRRE,... 50 0.14 1
(CR382131) Yarrowia lipolytica strain CLIB122 chromosome E c... 50 0.14 1
(AP008215) Oryza sativa (japonica cultivar-group) genomic DN... 50 0.14 1
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 50 0.14 1
(AP005872) Oryza sativa Japonica Group genomic DNA, chromoso... 50 0.14 1
(AM484291) Vitis vinifera contig VV78X242163.7, whole genome... 50 0.14 1
(AL669989) Neurospora crassa DNA linkage group II BAC clone ... 50 0.14 1
(AL669988) Neurospora crassa DNA linkage group II BAC contig... 50 0.14 1
(AM494957) Leishmania braziliensis chromosome 20. 50 0.14 1
(AC156619) Mus musculus chromosome 5 clone RP23-1J16 map 5, ... 50 0.14 1
(AC146997) Arbacia punctulata clone BAP-144G2, WORKING DRAFT... 50 0.14 1
(AC127156) Rattus norvegicus clone CH230-7B10, *** SEQUENCIN... 50 0.14 1
(AC115510) Rattus norvegicus clone CH230-383C9, *** SEQUENCI... 50 0.14 1
(AC114113) Rattus norvegicus clone CH230-186O3, WORKING DRAF... 50 0.14 1
(AC112456) Rattus norvegicus clone CH230-110N23, *** SEQUENC... 50 0.14 1
(AC112086) Rattus norvegicus clone CH230-332D11, *** SEQUENC... 50 0.14 1
(AC079476) Mus musculus clone RP23-140I12, WORKING DRAFT SEQ... 50 0.14 1
(AC234386) Monodelphis domestica clone VMRC18-55A20, WORKING... 50 0.14 1
(AC209686) Zea mays chromosome 1 clone CH201-197F11; ZMMBBc0... 50 0.14 1
(AC201609) Strongylocentrotus purpuratus clone R3-5N23, WORK... 50 0.14 1
(AC201355) Strongylocentrotus purpuratus clone R3-17B10, WOR... 50 0.14 1
(AC181081) Strongylocentrotus purpuratus clone R3-3048G17, W... 50 0.14 1
(AC179481) Strongylocentrotus purpuratus clone R3-63M7, WORK... 50 0.14 1
(AC179143) Strongylocentrotus purpuratus clone R3-4012D23, W... 50 0.14 1
(AC178882) Strongylocentrotus purpuratus clone R3-27H2, WORK... 50 0.14 1
(AC178390) Strongylocentrotus purpuratus clone R3-3107O18, W... 50 0.14 1
(AC177698) Strongylocentrotus purpuratus clone R3-1011O24, W... 50 0.14 1
(AC174871) Strongylocentrotus purpuratus clone R3-3112P21, W... 50 0.14 1
(AC174734) Strongylocentrotus purpuratus clone R3-1115F23, W... 50 0.14 1
(AC016018) Mus musculus strain C57BL6/J clone RP23-33E5, WOR... 50 0.14 1
(AQ935615) CpG2561B CpIOWAgDNA1 Cryptosporidium parvum genom... 50 0.14 1
(DX992928) CHORI103-15E5.TJ CHORI103 Schistosoma mansoni gen... 50 0.14 1
(DU626987) OO__Ba0133J24.f OO__Ba Oryza officinalis genomic ... 50 0.14 1
(AL397918) T7 end of clone AS0AA005H10 of library AS0AA from... 50 0.14 1
(DH504528) Monosiga ovata DNA, fosmid clone: MOF-075A17, gen... 50 0.14 1
(DH484117) Monosiga ovata DNA, fosmid clone: MOF-039K12, gen... 50 0.14 1
(BX984535) Reverse strand read from insert in 5'HPRT inserti... 50 0.14 1
(BX957730) Reverse strand read from insert in 5'HPRT inserti... 50 0.14 1
(BX545613) Leishmania braziliensis GSS, clone LBAF052E07. 50 0.14 1
(EH743760) CNMS3450.b1_D24.ab1 CNM(LMS) spotted knapweed Cen... 50 0.14 1
(EB762892) LM6-3 LM Leptosphaeria maculans cDNA, mRNA sequence. 50 0.14 1
(DT731723) EST1165573 Aquilegia cDNA library Aquilegia formo... 50 0.14 1
(DT731722) EST1165572 Aquilegia cDNA library Aquilegia formo... 50 0.14 1
(AU052991) Dictyostelium discoideum slug cDNA, clone SLF463. 50 0.14 1
(AU034579) Dictyostelium discoideum slug cDNA, clone SLC513. 50 0.14 1
(CI997489) Marsupenaeus japonicus cDNA, clone:YAQ01A01NGRM00... 50 0.14 1
(BJ851673) Marchantia polymorpha cDNA clone:lwa39a13, 5' end. 50 0.14 1
(BJ431126) Dictyostelium discoideum cDNA clone:ddv9o23, 3' e... 50 0.14 1
(BJ430988) Dictyostelium discoideum cDNA clone:ddv9a14, 3' e... 50 0.14 1
(BJ429428) Dictyostelium discoideum cDNA clone:ddv3o08, 3' e... 50 0.14 1
(BJ402423) Dictyostelium discoideum cDNA clone:dds16j20, 3' ... 50 0.14 1
(BJ401695) Dictyostelium discoideum cDNA clone:dds19i05, 3' ... 50 0.14 1
(BJ401378) Dictyostelium discoideum cDNA clone:dds23e04, 3' ... 50 0.14 1
(BJ400722) Dictyostelium discoideum cDNA clone:dds14a15, 3' ... 50 0.14 1
(BJ400451) Dictyostelium discoideum cDNA clone:dds13h11, 3' ... 50 0.14 1
(BJ399956) Dictyostelium discoideum cDNA clone:dds8n01, 3' e... 50 0.14 1
(BJ398944) Dictyostelium discoideum cDNA clone:dds3c09, 3' e... 50 0.14 1
(BJ398928) Dictyostelium discoideum cDNA clone:dds3m04, 3' e... 50 0.14 1
(BJ398761) Dictyostelium discoideum cDNA clone:dds2h04, 3' e... 50 0.14 1
(BJ398415) Dictyostelium discoideum cDNA clone:dds12j08, 3' ... 50 0.14 1
(BJ398328) Dictyostelium discoideum cDNA clone:dds12d02, 3' ... 50 0.14 1
(BJ398071) Dictyostelium discoideum cDNA clone:dds10h22, 3' ... 50 0.14 1
(BJ389085) Dictyostelium discoideum cDNA clone:dds17o11, 5' ... 50 0.14 1
(BJ388843) Dictyostelium discoideum cDNA clone:dds16o11, 5' ... 50 0.14 1
(BJ377228) Dictyostelium discoideum cDNA clone:ddc22g05, 3' ... 50 0.14 1
(BJ377112) Dictyostelium discoideum cDNA clone:ddc22k18, 3' ... 50 0.14 1
(BJ376545) Dictyostelium discoideum cDNA clone:ddc28p19, 3' ... 50 0.14 1
(BJ375034) Dictyostelium discoideum cDNA clone:ddc17n03, 3' ... 50 0.14 1
(BJ374444) Dictyostelium discoideum cDNA clone:ddc7h19, 3' e... 50 0.14 1
(BJ373934) Dictyostelium discoideum cDNA clone:ddc5p07, 3' e... 50 0.14 1
(BJ373779) Dictyostelium discoideum cDNA clone:ddc4o20, 3' e... 50 0.14 1
(BJ372380) Dictyostelium discoideum cDNA clone:ddc12k08, 3' ... 50 0.14 1
(BJ347712) Dictyostelium discoideum cDNA clone:dda27m23, 3' ... 50 0.14 1
(BJ347668) Dictyostelium discoideum cDNA clone:dda27e22, 3' ... 50 0.14 1
(BJ347127) Dictyostelium discoideum cDNA clone:dda26n04, 3' ... 50 0.14 1
(BJ346559) Dictyostelium discoideum cDNA clone:dda24g08, 3' ... 50 0.14 1
(BJ346522) Dictyostelium discoideum cDNA clone:dda24p04, 3' ... 50 0.14 1
(BJ346094) Dictyostelium discoideum cDNA clone:dda29h02, 3' ... 50 0.14 1
(BJ345844) Dictyostelium discoideum cDNA clone:dda29b07, 3' ... 50 0.14 1
(BJ345566) Dictyostelium discoideum cDNA clone:dda28h04, 3' ... 50 0.14 1
(BJ345101) Dictyostelium discoideum cDNA clone:dda21j13, 3' ... 50 0.14 1
(BJ345071) Dictyostelium discoideum cDNA clone:dda21c13, 3' ... 50 0.14 1
(BJ344977) Dictyostelium discoideum cDNA clone:dda21n06, 3' ... 50 0.14 1
(BJ344901) Dictyostelium discoideum cDNA clone:dda20l23, 3' ... 50 0.14 1
(BJ344631) Dictyostelium discoideum cDNA clone:dda19p22, 3' ... 50 0.14 1
(BJ344551) Dictyostelium discoideum cDNA clone:dda19p16, 3' ... 50 0.14 1
(BJ344473) Dictyostelium discoideum cDNA clone:dda19n10, 3' ... 50 0.14 1
(BJ344324) Dictyostelium discoideum cDNA clone:dda18k02, 3' ... 50 0.14 1
(BJ343806) Dictyostelium discoideum cDNA clone:dda17b10, 3' ... 50 0.14 1
(BJ343580) Dictyostelium discoideum cDNA clone:dda16d14, 3' ... 50 0.14 1
(BJ342907) Dictyostelium discoideum cDNA clone:dda15i07, 3' ... 50 0.14 1
(BJ342866) Dictyostelium discoideum cDNA clone:dda15o03, 3' ... 50 0.14 1
(BJ342817) Dictyostelium discoideum cDNA clone:dda1p17, 3' e... 50 0.14 1
(BJ342617) Dictyostelium discoideum cDNA clone:dda14h22, 3' ... 50 0.14 1
(BJ342241) Dictyostelium discoideum cDNA clone:dda13f04, 3' ... 50 0.14 1
(BJ342216) Dictyostelium discoideum cDNA clone:dda9o23, 3' e... 50 0.14 1
(BJ341643) Dictyostelium discoideum cDNA clone:dda7f15, 3' e... 50 0.14 1
(BJ341607) Dictyostelium discoideum cDNA clone:dda7l11, 3' e... 50 0.14 1
(BJ341480) Dictyostelium discoideum cDNA clone:dda6h21, 3' e... 50 0.14 1
(BJ341421) Dictyostelium discoideum cDNA clone:dda6g13, 3' e... 50 0.14 1
(BJ341408) Dictyostelium discoideum cDNA clone:dda6d18, 3' e... 50 0.14 1
(BJ341406) Dictyostelium discoideum cDNA clone:dda6d16, 3' e... 50 0.14 1
(BJ341190) Dictyostelium discoideum cDNA clone:dda5h16, 3' e... 50 0.14 1
(BJ341050) Dictyostelium discoideum cDNA clone:dda5c03, 3' e... 50 0.14 1
(BJ340769) Dictyostelium discoideum cDNA clone:dda3d24, 3' e... 50 0.14 1
(BJ340750) Dictyostelium discoideum cDNA clone:dda3n13, 3' e... 50 0.14 1
(BJ340615) Dictyostelium discoideum cDNA clone:dda3d06, 3' e... 50 0.14 1
(BJ340600) Dictyostelium discoideum cDNA clone:dda2o23, 3' e... 50 0.14 1
(BJ340587) Dictyostelium discoideum cDNA clone:dda2i22, 3' e... 50 0.14 1
(BJ340276) Dictyostelium discoideum cDNA clone:dda12l11, 3' ... 50 0.14 1
(BJ340194) Dictyostelium discoideum cDNA clone:dda12f04, 3' ... 50 0.14 1
(BJ340069) Dictyostelium discoideum cDNA clone:dda11c14, 3' ... 50 0.14 1
(BJ339759) Dictyostelium discoideum cDNA clone:dda10d07, 3' ... 50 0.14 1
(BJ339692) Dictyostelium discoideum cDNA clone:dda10d01, 3' ... 50 0.14 1
(BI556463) 603237209F1 NCI_CGAP_Mam3 Mus musculus cDNA clone... 50 0.14 1
(GO317417) 014_C12 Lathyrus odoratus leaf Lathyrus odoratus ... 50 0.14 1
(GO315361) 007_E06 Lathyrus odoratus leaf Lathyrus odoratus ... 50 0.14 1
(GD174501) EST00710 Watermelon fruit normalization and subtr... 50 0.14 1
(FL641488) TS05-B10 Reticulitermes flavipes symbiont library... 50 0.14 1
(FG807171) K092C12 Cassava root 210-day-old plants cDNA libr... 50 0.14 1
(EX841955) CBNC11072.rev CBNC Phycomyces blakesleeanus NRRL1... 50 0.14 1
(EX834885) CBNB4794.fwd CBNB Phycomyces blakesleeanus NRRL15... 50 0.14 1
(EX817876) CBNA5802.rev CBNA Phycomyces blakesleeanus NRRL15... 50 0.14 1
(EX817161) CBNA5406.rev CBNA Phycomyces blakesleeanus NRRL15... 50 0.14 1
(EX816898) CBNA5272.fwd CBNA Phycomyces blakesleeanus NRRL15... 50 0.14 1
(EX501493) TPAF-aac01a02.g1 T.spiralis_EST Trichinella spira... 50 0.14 1
(EW968114) LS_14_I16_T7 Headlice composite library with all ... 50 0.14 1
(CP001337) Chloroflexus aggregans DSM 9485, complete genome. 50 0.14 1
(AC176868) Strongylocentrotus purpuratus clone R3-31D9, WORK... 46 0.16 7
(AC229680) Solanum lycopersicum chromosome 12 clone LE_HBa-5... 36 0.25 7
(CP001087) Desulfobacterium autotrophicum HRM2, complete gen... 38 0.26 2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 0.28 9
(AC158175) Rattus norvegicus clone CH230-37O22, WORKING DRAF... 44 0.31 2
(AC137390) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 0.31 2
(AC097437) Rattus norvegicus clone CH230-202L3, *** SEQUENCI... 44 0.31 2
(AC137009) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 44 0.31 2
(AC113600) Mus musculus chromosome 6, clone RP23-110A19, com... 34 0.31 2
(AC180896) Strongylocentrotus purpuratus clone R3-3026E03, W... 34 0.32 2
(AC145116) Mus musculus BAC clone RP23-434H14 from 6, comple... 34 0.32 2
(AC180709) Strongylocentrotus purpuratus clone R3-3084B23, W... 34 0.32 2
(AC178592) Strongylocentrotus purpuratus clone R3-113N07, WO... 48 0.32 2

>(C84799) Dictyostelium discoideum slug cDNA, clone SSF855.
Length = 616

Score = 882 bits (445), Expect(3) = 0.0
Identities = 448/449 (99%)
Strand = Plus / Plus


Query: 218 tctaatatttgaaatgctattaacatttgttcatccaggtacaactctatttgaacaaaa 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tctaatatttgaaatgctattaacatttgttcatccaggtacaactctatttgaacaaaa 60


Query: 278 tgtattgttcctcttgaaatttcatggtattgaaattgtgccaactggtggccctaacaa 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtattgttcctcttgaaatttcatggtattgaaattgtgccaactggtggccctaacaa 120


Query: 338 caattatacaacattgaaagttgcattttcaaatgatattagaaactttacatcaaatac 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caattatacaacattgaaagttgcattttcaaatgatattagaaactttacatcaaatac 180


Query: 398 tcaattcactacaattacatttgattcaaagtttaacccaatcatttcacaaattattaa 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaattcactacaattacatttgattcaaagtttaacccaatcatttcacaaattattaa 240


Query: 458 ttacattcaatactatagaaatagaccaaattctagtcaagtattggaatcattaatcaa 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttacattcaatactatagaaatagaccaaattctagtcaagtattggaatcattaatcaa 300


Query: 518 taatcatcaatattcattaaataataatctaccaccaatttttgttgaaaatccaaatga 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taatcatcaatattcattaaataataatctaccaccaatttttgttgaaaatccaaatga 360


Query: 578 taaatatgaaccagtagatgccaactcttcagatgactcatctgtcctttaccattctta 637
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaatatgaaccagtagacgccaactcttcagatgactcatctgtcctttaccattctta 420


Query: 638 tgatagctctgatgctgatgatactcctt 666
|||||||||||||||||||||||||||||
Sbjct: 421 tgatagctctgatgctgatgatactcctt 449

Score = 159 bits (80), Expect(3) = 0.0
Identities = 80/80 (100%)
Strand = Plus / Plus


Query: 666 tactccttcttttgaaattacgattactcgtgataatttcaatcaaagtataaatcatca 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tactccttcttttgaaattacgattactcgtgataatttcaatcaaagtataaatcatca 501


Query: 726 gtgaacgcacaataatttta 745
||||||||||||||||||||
Sbjct: 502 gtgaacgcacaataatttta 521

Score = 113 bits (57), Expect(3) = 0.0
Identities = 57/57 (100%)
Strand = Plus / Plus


Query: 771 ctcttagtaatactttttgtaccatttcaaattttttaaataaaactgaatcaaatt 827
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ctcttagtaatactttttgtaccatttcaaattttttaaataaaactgaatcaaatt 603

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 1,094,316,531
Number of extensions: 69870907
Number of successful extensions: 5966381
Number of sequences better than 10.0: 1375
Length of query: 836
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 812
Effective length of database: 102,084,959,077
Effective search space: 82892986770524
Effective search space used: 82892986770524
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 8. 1
Homology vs Protein
Query= Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Contig-U05175-1Q.Seq.d
(836 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54SK3) RecName: Full=Probable serine/threonine-protein kinase ... 388 e-113
GN106233_1(GN106233|pid:none) Sequence 11014 from Patent WO20090... 35 2.4
AF034090_1(AF034090|pid:none) Neurospora crassa MAPKK kinase (nr... 35 2.4
AC138195_4(AC138195|pid:none) Oryza sativa (japonica cultivar-gr... 33 8.9

>(Q54SK3) RecName: Full=Probable serine/threonine-protein kinase
DDB_G0282417; EC=2.7.11.1;
Length = 528

Score = 388 bits (997), Expect(2) = e-113
Identities = 192/212 (90%), Positives = 192/212 (90%), Gaps = 1/212 (0%)
Frame = +3

Query: 33 NTRNPVVLGDFGCARKMDVPIRLCDTNGHENYKSLERYWDYNQCRIKTTSFIRDNEDIFS 212
NTRNPVVLGDFGCARKMDVPIRLCDTNGHENYKSLERYWDYNQCRIKTTSFIRDNEDIFS
Sbjct: 299 NTRNPVVLGDFGCARKMDVPIRLCDTNGHENYKSLERYWDYNQCRIKTTSFIRDNEDIFS 358

Query: 213 LG-LIFEMLLTFVHPGTTLFEQNVLFLLKFHGIEIVPTGGPNNNYTTLKVAFSNDIRNFT 389
LG LIFEMLLTFVHPGTTLFEQNVLFLLKFHGIEIVPTGGPNNNYTTLKVAFSNDIRNFT
Sbjct: 359 LGVLIFEMLLTFVHPGTTLFEQNVLFLLKFHGIEIVPTGGPNNNYTTLKVAFSNDIRNFT 418

Query: 390 SNTQFTTITFDSKFXXXXXXXXXXXXXXXXXXXSSQVLESLINNHQYSLNNNLPPIFVEN 569
SNTQFTTITFDSKF SSQVLESLINNHQYSLNNNLPPIFVEN
Sbjct: 419 SNTQFTTITFDSKFNPIISQIINYIQYYRNRPNSSQVLESLINNHQYSLNNNLPPIFVEN 478

Query: 570 PNDKYEPVDANSSDDSSVLYHSYDSSDADDTP 665
PNDKYEPVDANSSDDSSVLYHSYDSSDADDTP
Sbjct: 479 PNDKYEPVDANSSDDSSVLYHSYDSSDADDTP 510

Score = 45.4 bits (106), Expect(2) = e-113
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1

Query: 667 TPSFEITITRDNFNQSINHQ 726
TPSFEITITRDNFNQSINHQ
Sbjct: 509 TPSFEITITRDNFNQSINHQ 528

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,193,782,136
Number of extensions: 22739429
Number of successful extensions: 62895
Number of sequences better than 10.0: 4
Number of HSP's gapped: 62060
Number of HSP's successfully gapped: 5
Length of query: 278
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 151
Effective length of database: 646,092,785
Effective search space: 97560010535
Effective search space used: 97560010535
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.82 gvh: 0.25 alm: 0.34 top: 0.53 tms: 0.00 mit: 0.21 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.50
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: nuclear
36.0 %: cytoplasmic
8.0 %: Golgi
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: mitochondrial
4.0 %: vesicles of secretory system

>> prediction for Contig-U05175-1 is nuc

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0