>Contig-U05079-1 (Contig-U05079-1Q) /CSM_Contig/Contig-U05079-1Q.Seq.d
TATAAATAGATCTATTATAAAGAAATAATTATTTTTTTTTAAAAAAATGA
TGGAATTAGGATTTGAAAATGATATTGATTTATTAAATCAATATCAAACA
ATTCAATCAAGAAAAACAAAAGATTATAAAAAGTTTTTAGAAATTAAACA
AGAGAATAAGAATCAACATTTAGATATTATCTCATCATTTTGGGATGTAA
TTGTTATTACTGCTATTGATTCACTTCAAAAGGAATACTATGAGCAAGTA
TTAAAAGAAAAGATGAATCAAAATCAAATTCCATCATTTATACCTTACGT
TGTAATTTCTGATCCAGTTGGTGAAAAAATAGGTTGTGGTGGTTCAACCC
TTTATGTTTTAAAAACATTATCAACAATATTTGGTGATGATAAAATTAAA
AATATGAAAATATTATTATTACATGCTGGTGGGTATAGTAAAAGATTACC
AAATCATTCAACAACTGGTAAGATATTTGCATCAATACCATGTACACTTG
GAATGGGTGGAAATAATAATAATAATAATGATGACGAAGATGAATCAAAA
TTACAAGCATGTTCAATGTTAGAAATTAAATTAATAATATTAATTGATAT
ACCAAAGAGAATGAAACCAGGTGTATTCTTAGCATGTTCAGATGATATTG
AATTATTTGAATCAAATGAAATGTCT

est1=SSF136F,1,677

inrsiikk*LFFFKKMMELGFENDIDLLNQYQTIQSRKTKDYKKFLEIKQENKNQHLDII
SSFWDVIVITAIDSLQKEYYEQVLKEKMNQNQIPSFIPYVVISDPVGEKIGCGGSTLYVL
KTLSTIFGDDKIKNMKILLLHAGGYSKRLPNHSTTGKIFASIPCTLGMGGNNNNNNDDED
ESKLQACSMLEIKLIILIDIPKRMKPGVFLACSDDIELFESNEMS

Frame A:
yk*iyykeiiiff*kndgiri*k*y*fiksisnnsikknkrl*kvfrn*tre*estfryy
liilgcncyycy*ftskgil*asikrkdesksnsiiytlrcnf*ssw*knrlwwfnplcf
kniinniw***n*kyeniiitcwwv**kitksfnnw*dicintmytwngwk*******rr
*ikitsmfnvrn*innin*ytkenetrcilsmfr*y*ii*ik*nv


Frame B:
inrsiikk*LFFFKKMMELGFENDIDLLNQYQTIQSRKTKDYKKFLEIKQENKNQHLDII
SSFWDVIVITAIDSLQKEYYEQVLKEKMNQNQIPSFIPYVVISDPVGEKIGCGGSTLYVL
KTLSTIFGDDKIKNMKILLLHAGGYSKRLPNHSTTGKIFASIPCTLGMGGNNNNNNDDED
ESKLQACSMLEIKLIILIDIPKRMKPGVFLACSDDIELFESNEMS


Frame C:
*idll*rnnyfflkk*wn*dlkmiliy*inikqfnqekqkiiksf*klnkririni*ils
hhfgm*llllllihfkrntmsky*kkr*ikikfhhlyltl*fliqlvkk*vvvvqpfmf*
khyqqylvmiklki*kyyyymlvgivkdyqiiqqlvrylhqyhvhlewveiiiiimmtkm
nqnykhvqc*kln**y*liyqre*nqvys*hvqmilnylnqmkc

Query= Contig-U05079-1 (Contig-U05079-1Q)
/CSM_Contig/Contig-U05079-1Q.Seq.d
         (676 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U05079-1 (Contig-U05079-1Q) /CSM_Contig/Conti...   920  0.0
Contig-U13148-1 (Contig-U13148-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U00298-1 (Contig-U00298-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U11428-1 (Contig-U11428-1Q) /CSM_Contig/Conti...    42  8e-04
Contig-U09637-1 (Contig-U09637-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U04427-1 (Contig-U04427-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U14899-1 (Contig-U14899-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U14481-1 (Contig-U14481-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U14053-1 (Contig-U14053-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U09469-1 (Contig-U09469-1Q) /CSM_Contig/Conti...    38  0.012

>Contig-U05079-1 (Contig-U05079-1Q) /CSM_Contig/Contig-U05079-1Q.Seq.d
          Length = 676

 Score =  920 bits (464), Expect = 0.0
 Identities = 464/464 (100%)
 Strand = Plus / Plus

                                                                       
Query: 48  tgatggaattaggatttgaaaatgatattgatttattaaatcaatatcaaacaattcaat 107
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  tgatggaattaggatttgaaaatgatattgatttattaaatcaatatcaaacaattcaat 107

                                                                       
Query: 108 caagaaaaacaaaagattataaaaagtttttagaaattaaacaagagaataagaatcaac 167
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 caagaaaaacaaaagattataaaaagtttttagaaattaaacaagagaataagaatcaac 167

                                                                       
Query: 168 atttagatattatctcatcattttgggatgtaattgttattactgctattgattcacttc 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atttagatattatctcatcattttgggatgtaattgttattactgctattgattcacttc 227

                                                                       
Query: 228 aaaaggaatactatgagcaagtattaaaagaaaagatgaatcaaaatcaaattccatcat 287
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aaaaggaatactatgagcaagtattaaaagaaaagatgaatcaaaatcaaattccatcat 287

                                                                       
Query: 288 ttataccttacgttgtaatttctgatccagttggtgaaaaaataggttgtggtggttcaa 347
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttataccttacgttgtaatttctgatccagttggtgaaaaaataggttgtggtggttcaa 347

                                                                       
Query: 348 ccctttatgttttaaaaacattatcaacaatatttggtgatgataaaattaaaaatatga 407
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccctttatgttttaaaaacattatcaacaatatttggtgatgataaaattaaaaatatga 407

                                                                       
Query: 408 aaatattattattacatgctggtgggtatagtaaaagattaccaaatcattcaacaactg 467
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaatattattattacatgctggtgggtatagtaaaagattaccaaatcattcaacaactg 467

                                                       
Query: 468 gtaagatatttgcatcaataccatgtacacttggaatgggtgga 511
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gtaagatatttgcatcaataccatgtacacttggaatgggtgga 511


 Score =  291 bits (147), Expect = 5e-79
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                       
Query: 530 gatgacgaagatgaatcaaaattacaagcatgttcaatgttagaaattaaattaataata 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gatgacgaagatgaatcaaaattacaagcatgttcaatgttagaaattaaattaataata 589

                                                                       
Query: 590 ttaattgatataccaaagagaatgaaaccaggtgtattcttagcatgttcagatgatatt 649
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttaattgatataccaaagagaatgaaaccaggtgtattcttagcatgttcagatgatatt 649

                                      
Query: 650 gaattatttgaatcaaatgaaatgtct 676
           |||||||||||||||||||||||||||
Sbjct: 650 gaattatttgaatcaaatgaaatgtct 676


 Score = 61.9 bits (31), Expect = 8e-10
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                         
Query: 1  tataaatagatctattataaagaaataatta 31
          |||||||||||||||||||||||||||||||
Sbjct: 1  tataaatagatctattataaagaaataatta 31


 Score = 46.1 bits (23), Expect = 5e-05
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 70 tgatattgatttattaaatcaatatca 96
          ||||||||||||| |||||||||||||
Sbjct: 96 tgatattgatttaataaatcaatatca 70


 Score = 30.2 bits (15), Expect = 2.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 260 aagatgaatcaaaat 274
           |||||||||||||||
Sbjct: 537 aagatgaatcaaaat 551


 Score = 30.2 bits (15), Expect = 2.9
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 537 aagatgaatcaaaat 551
           |||||||||||||||
Sbjct: 260 aagatgaatcaaaat 274


>Contig-U13148-1 (Contig-U13148-1Q) /CSM_Contig/Contig-U13148-1Q.Seq.d
          Length = 216

 Score = 46.1 bits (23), Expect = 5e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 575 attaaattaataatattaattgatataccaa 605
           ||||||||||||||| ||||| |||||||||
Sbjct: 177 attaaattaataataataatttatataccaa 207


>Contig-U00298-1 (Contig-U00298-1Q) /CSM_Contig/Contig-U00298-1Q.Seq.d
          Length = 387

 Score = 46.1 bits (23), Expect = 5e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 575 attaaattaataatattaattgatataccaa 605
           ||||||||||||||| ||||| |||||||||
Sbjct: 287 attaaattaataataataatttatataccaa 317


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,348
Number of Sequences: 6905
Number of extensions: 28348
Number of successful extensions: 2996
Number of sequences better than 10.0: 368
length of query: 676
length of database: 5,674,871
effective HSP length: 16
effective length of query: 660
effective length of database: 5,564,391
effective search space: 3672498060
effective search space used: 3672498060
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U05079-1 (Contig-U05079-1Q) /CSM_Contig/Contig-U05079-1Q.Seq.d
         (676 letters)

Database: ddbj_B
           105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU072808) Dictyostelium discoideum slug cDNA, clone SSF136.      383   e-114  2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         38   4e-06  19
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete...    44   2e-05  14
(AE014186) Plasmodium falciparum 3D7 chromosome 11, complete...    36   3e-05  15
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   1e-04  12
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    38   5e-04  14
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       34   7e-04  12
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.002  13
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18...    34   0.002  10
(AE017263) Mesoplasma florum L1 complete genome.                   34   0.004  14
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    34   0.004  11
(EI283776) GM_WBc0002K08.f GM_WBc Glycine max genomic clone ...    44   0.005  2
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    44   0.005  16
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    44   0.005  16
(CP000361) Arcobacter butzleri RM4018, complete genome.            34   0.005  20
(AL844509) Plasmodium falciparum 3D7 chromosome 13.                40   0.007  12
(AC235235) Glycine max strain Williams 82 clone GM_WBb0028H0...    42   0.008  6
(CP000716) Thermosipho melanesiensis BI429, complete genome.       44   0.008  21
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    34   0.009  10
(AL844506) Plasmodium falciparum 3D7 chromosome 7.                 40   0.013  13
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    30   0.013  12
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    36   0.014  13
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome.    34   0.018  22
(AL844502) Plasmodium falciparum 3D7 chromosome 3.                 36   0.020  14
(AL844507) Plasmodium falciparum 3D7 chromosome 8.                 40   0.022  13
(DT777069) 127445784 TH1 Tribolium castaneum cDNA clone 127K...    52   0.029  1
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co...    38   0.035  4
(AC107423) Homo sapiens 3 BAC RP11-372M20 (Roswell Park Canc...    50   0.036  3
(DQ158857) Bigelowiella natans nucleomorph chromosome 2, com...    36   0.040  8
(AJ249657) Plasmodium falciparum mRNA for N-acetylglucosamin...    42   0.051  2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    34   0.060  16
(AY689436) Deerpox virus W-848-83, complete genome.                32   0.061  10
(AM285311) Spiroplasma citri GII3-3X chromosome, contig Cont...    42   0.064  6
(AC219736) Bos taurus clone CH240-324N13, WORKING DRAFT SEQU...    46   0.069  2
(AG869676) Oryza sativa Indica Group genomic DNA, BAC end se...    42   0.073  2
(CP001083) Clostridium botulinum Ba4 str. 657, complete genome.    34   0.073  16
(AL844508) Plasmodium falciparum 3D7 chromosome 9.                 36   0.081  14
(AC232009) Solanum tuberosum chromosome 1 clone RH029M09, **...    38   0.090  6
(FI505041) 078-TKN-MI_007_H03_Sp6 078-TKN-MI Meleagris gallo...    44   0.10   2
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         38   0.11   17
(AL161667) Arabidopsis thaliana DNA chromosome 3, BAC clone ...    50   0.11   1
(AL132975) Arabidopsis thaliana DNA chromosome 3, BAC clone ...    50   0.11   1
(EA752953) Sequence 42 from patent US 7368630.                     50   0.11   1
(DJ028685) A STRESS-RESPONSIVE PROMOTER.                           50   0.11   1
(DD082773) A STRESS-RESPONSIVE PROMOTER.                           50   0.11   1
(CS626571) Sequence 42 from Patent EP1803813.                      50   0.11   1
(BD307137) A STRESS-RESPONSIVE PROMOTER AND A GENE CORDING F...    50   0.11   1
(AX647883) Sequence 2075 from Patent EP1270724.                    50   0.11   1
(DQ135710) Plasmodium falciparum isolate MUZ106 EMP1 (var-73...    50   0.11   1
(AC117421) Homo sapiens 3 BAC RP11-147F23 (Roswell Park Canc...    50   0.11   1
(AC024537) Homo sapiens chromosome 3 clone RP11-372M20 map 3...    50   0.11   1
(FM883351) Plasmodium falciparum GSS, strain 3D7, clone DBL1...    50   0.11   1
(EJ186975) 1092344159591 Global-Ocean-Sampling_GS-27-01-01-1...    50   0.11   1
(AL080656) Arabidopsis thaliana genome survey sequence T7 en...    50   0.11   1
(EK409005) 1095505115616 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.13   3
(BX649429) Zebrafish DNA sequence from clone DKEY-1H4 in lin...    38   0.13   7
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    34   0.14   10
(AC189636) Brassica rapa subsp. pekinensis clone KBrS004M05,...    36   0.15   6
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete...    36   0.15   12
(AM449787) Vitis vinifera, whole genome shotgun sequence, co...    34   0.17   6
(CT573028) M.truncatula DNA sequence from clone MTH2-51N20 o...    42   0.19   5
(CP000940) Clostridium botulinum B1 str. Okra plasmid pCLD, ...    32   0.21   6
(AM458373) Vitis vinifera, whole genome shotgun sequence, co...    38   0.21   4
(AL844505) Plasmodium falciparum 3D7 chromosome 6.                 34   0.22   12
(AE017308) Mycoplasma mobile 163K complete genome.                 36   0.23   18
(CU611044) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   0.23   6
(CP000994) Borrelia recurrentis A1 plasmid pl124, complete s...    32   0.23   8
(CP001357) Brachyspira hyodysenteriae WA1, complete genome.        36   0.23   14
(FH973725) CHO_OF6815xp04f1.ab1 CHO_OF6 Nicotiana tabacum ge...    42   0.24   2
(CU695293) Brassica rapa subsp. pekinensis clone KBrH024O16,...    42   0.24   5
(CP000932) Campylobacter lari RM2100, complete genome.             36   0.25   18
(AB125341) Staphylococcus warneri plasmid pPI-1 DNA, complet...    34   0.26   5
(AC109365) Oryza sativa (japonica cultivar-group) chromosome...    38   0.26   2
(AM285307) Spiroplasma citri GII3-3X chromosome, contig Cont...    34   0.26   7
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen...    34   0.26   16
(AC118347) Oryza sativa (japonica cultivar-group) chromosome...    38   0.26   2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    30   0.26   13
(AC094066) Rattus norvegicus clone CH230-111N7, *** SEQUENCI...    40   0.27   8
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    34   0.28   16
(CR940348) Theileria annulata genomic DNA chromosome 2.            34   0.29   18
(EA697113) Sequence 75992 from patent US 7365185.                  38   0.29   2
(EA697089) Sequence 75968 from patent US 7365185.                  38   0.30   2
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    38   0.31   15
(CS468878) Sequence 69 from Patent EP1748080.                      36   0.32   8
(CS419355) Sequence 69 from Patent WO2006094836.                   36   0.32   8
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    38   0.32   14
(EK281323) 1095462296443 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.33   2
(AC152187) Bos taurus clone CH240-6E13, WORKING DRAFT SEQUEN...    40   0.35   5
(AP010011) Lotus japonicus genomic DNA, clone: LjT30N04, TM0...    42   0.38   5
(AL607077) Human DNA sequence from clone RP11-374I15 on chro...    36   0.38   9
(CP000743) Methanococcus aeolicus Nankai-3, complete genome.       32   0.39   19
(AM180355) Clostridium difficile 630 complete genome.              36   0.40   16
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    36   0.43   11
(EU527334) Gastrimargus marmoratus mitochondrion, complete g...    36   0.44   3
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    34   0.44   14
(CU207319) Mouse DNA sequence from clone CH29-68O18 on chrom...    48   0.45   1
(AC128664) Mus musculus BAC clone RP24-328H10 from 6, comple...    48   0.45   1
(AC111107) Mus musculus chromosome 5, clone RP23-195P3, comp...    48   0.45   1
(CT010481) M.truncatula DNA sequence from clone MTH2-62G7 on...    48   0.45   1
(AC113554) Homo sapiens chromosome 17, clone CTD-2501B8, com...    48   0.45   1
(AC046185) Homo sapiens chromosome 17, clone RP11-51F16, com...    48   0.45   1
(EJ771792) 1092970300545 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.45   1
(EJ757003) 1092963089310 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.45   1
(CG941544) MBEFS04TR mth2 Medicago truncatula genomic clone ...    48   0.45   1
(BQ071878) AGENCOURT_6859131 NIH_MGC_47 Homo sapiens cDNA cl...    48   0.45   1
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    44   0.47   16
(AL928739) Mouse DNA sequence from clone RP23-409L24 on chro...    46   0.47   5
(CP000016) Candidatus Blochmannia pennsylvanicus str. BPEN, ...    38   0.47   13
(AP010656) Candidatus Azobacteroides pseudotrichonymphae gen...    40   0.49   10
(CT009739) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   0.57   7
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    30   0.61   10
(AL935035) Zebrafish DNA sequence from clone CH211-180B22 in...    38   0.62   4
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    36   0.63   14
(C91056) Dictyostelium discoideum slug cDNA, clone SSJ429.         32   0.64   3
(AC152447) Medicago truncatula clone mth2-46m2, WORKING DRAF...    34   0.65   7
(AM285304) Spiroplasma citri GII3-3X chromosome, contig Cont...    32   0.66   11
(AM003779) Drosophila simulans STS fragment ID 207.                44   0.67   2
(CU855620) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   0.69   6
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont...    30   0.69   10
(AM482565) Vitis vinifera contig VV78X123414.4, whole genome...    38   0.69   4
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25...    38   0.69   17
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         32   0.70   9
(EU746607) Trichomalopsis sarcophagae cytochrome oxidase sub...    38   0.70   3
(AM455275) Vitis vinifera contig VV78X116155.5, whole genome...    30   0.71   6
(BX571961) Zebrafish DNA sequence from clone DKEY-205O12 in ...    38   0.73   7
(AP007968) Lotus japonicus genomic DNA, chromosome 3, clone:...    36   0.74   4
(AX356494) Sequence 128 from Patent WO0181622.                     34   0.75   7
(AX347027) Sequence 2098 from Patent WO0200928.                    34   0.75   7
(AC125132) Mus musculus BAC clone RP24-314B3 from chromosome...    38   0.75   3
(AM450642) Vitis vinifera, whole genome shotgun sequence, co...    42   0.76   3
(DX537077) GH_MBb0073B16f GH_MBb Gossypium hirsutum genomic ...    34   0.79   3
(AC068875) Homo sapiens chromosome 15, clone RP11-720L8, com...    46   0.79   4
(EJ578194) 1092960127858 Global-Ocean-Sampling_GS-29-01-01-1...    38   0.80   3
(AC176742) Strongylocentrotus purpuratus clone R3-3097C16, W...    38   0.81   6
(AC222506) Bos taurus clone CH240-420B23, WORKING DRAFT SEQU...    40   0.83   5
(BH940567) odd80c08.g1 B.oleracea002 Brassica oleracea genom...    36   0.87   2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    34   0.88   13
(AC176172) Strongylocentrotus purpuratus clone R3-3066I12, W...    36   0.89   8
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771...    32   0.91   7
(AM426759) Vitis vinifera contig VV78X120474.15, whole genom...    38   0.95   4
(CP000538) Campylobacter jejuni subsp. jejuni 81-176, comple...    40   1.00   17
(AC222056) Bos taurus clone CH240-372O18, WORKING DRAFT SEQU...    36   1.00   4
(AC004710) Plasmodium falciparum chromosome 12, *** SEQUENCI...    28   1.0    12
(AC189345) Brassica rapa subsp. pekinensis clone KBrB042L19,...    46   1.0    3
(AL844504) Plasmodium falciparum 3D7 chromosome 5.                 38   1.0    12
(BX004874) Zebrafish DNA sequence from clone CH211-39E15 in ...    36   1.0    8
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)...    34   1.1    13
(EJ562816) 1092959675595 Global-Ocean-Sampling_GS-29-01-01-1...    38   1.1    3
(EI493720) PV_GBa0110O06.f PV_GBa Phaseolus vulgaris genomic...    34   1.1    3
(AM432948) Vitis vinifera contig VV78X050594.3, whole genome...    36   1.2    2
(EK157414) 1095458011329 Global-Ocean-Sampling_GS-31-01-01-1...    38   1.2    2
(AC140025) Medicago truncatula clone mth2-11i16, complete se...    34   1.2    6
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    32   1.2    7
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    34   1.3    16
(EJ394428) 1093011987222 Global-Ocean-Sampling_GS-28-01-01-1...    36   1.3    2
(CU929309) Zebrafish DNA sequence from clone CH1073-458I1 in...    40   1.3    3
(EJ593448) 1092961064637 Global-Ocean-Sampling_GS-29-01-01-1...    38   1.3    3
(AY168956) Mycoplasma fermentans integrative conjugal elemen...    34   1.3    4
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    32   1.3    9
(AC187008) Canis Familiaris chromosome 6, clone XX-163J21, c...    36   1.4    5
(EU912438) Vaucheria litorea chloroplast, complete genome.         32   1.4    8
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    38   1.4    16
(EK178217) 1095458107531 Global-Ocean-Sampling_GS-31-01-01-1...    34   1.4    3
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    32   1.4    9
(AB001684) Chlorella vulgaris C-27 chloroplast DNA, complete...    34   1.4    5
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ...    30   1.4    21
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61...    28   1.4    13
(CU633452) M.truncatula DNA sequence from clone MTE1-30M4 on...    38   1.4    4
(CS468877) Sequence 68 from Patent EP1748080.                      36   1.4    11
(CS419354) Sequence 68 from Patent WO2006094836.                   36   1.4    11
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    32   1.4    11
(EJ871858) 1093018350378 Global-Ocean-Sampling_GS-30-02-01-1...    34   1.5    3
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome.      40   1.5    18
(AJ927179) Theileria annulata EST, clone tam026h05_q1k.            40   1.5    2
(CP000049) Borrelia turicatae 91E135, complete genome.             36   1.5    13
(AL022397) Human DNA sequence from clone CTA-11C7 on chromos...    36   1.6    5
(AC229705) Medicago truncatula clone mth2-49e17, complete se...    34   1.6    6
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            32   1.6    15
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693...    30   1.6    8
(FG289956) 1108793312383 New World Screwworm Egg 9261 ESTs C...    32   1.7    3
(FG282923) 1108383360957 New World Screwworm Egg 9261 ESTs C...    32   1.7    3
(EV421189) 210796337 NGP Nasonia giraulti cDNA clone 132E21 ...    42   1.7    2
(AM478522) Vitis vinifera contig VV78X140688.6, whole genome...    34   1.7    4
(CU570868) M.truncatula DNA sequence from clone MTH2-162A5 o...    36   1.7    7
(FG290085) 1108793314272 New World Screwworm Egg 9261 ESTs C...    32   1.7    3
(AL096782) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    30   1.7    7
(AC232014) Solanum tuberosum chromosome 5 clone RH044A21, **...    40   1.7    6
(FG288205) 1108793264454 New World Screwworm Egg 9261 ESTs C...    32   1.8    3
(AE014185) Plasmodium falciparum 3D7 chromosome 10, complete...    34   1.8    13
(BX294006) Zebrafish DNA sequence from clone CH211-145M1 in ...    46   1.8    1
(AC149526) Xenopus (Silurana) tropicalis clone ISB-250N19, c...    46   1.8    1
(AL928850) Mouse DNA sequence from clone RP23-260B13 on chro...    46   1.8    1
(AL589735) Mouse DNA sequence from clone RP23-211M15 on chro...    46   1.8    1
(AM443783) Vitis vinifera, whole genome shotgun sequence, co...    46   1.8    1
(AM435550) Vitis vinifera contig VV78X139472.4, whole genome...    46   1.8    1
(AM434503) Vitis vinifera contig VV78X218687.6, whole genome...    46   1.8    1
(AM431359) Vitis vinifera contig VV78X010000.75, whole genom...    46   1.8    1
(AC235187) Glycine max strain Williams 82 clone GM_WBb0010C0...    46   1.8    1
(AL121978) Human DNA sequence from clone RP3-520B18 on chrom...    46   1.8    1
(AC016304) Homo sapiens, clone RP11-25H11, complete sequence.      46   1.8    1
(AC157225) Bos taurus clone CH240-45J24, WORKING DRAFT SEQUE...    46   1.8    1
(AC110340) Rattus norvegicus clone CH230-32H18, *** SEQUENCI...    46   1.8    1
(AC105326) Mus musculus clone RP24-318N4, WORKING DRAFT SEQU...    46   1.8    1
(AC098095) Rattus norvegicus clone CH230-169F14, WORKING DRA...    46   1.8    1
(CU463868) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.8    1
(CT027563) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   1.8    1
(AP001368) Homo sapiens genomic DNA, chromosome 18q12 clone:...    46   1.8    1
(AC232674) Lama pacos clone CH246-383G16, WORKING DRAFT SEQU...    46   1.8    1
(AC181199) Strongylocentrotus purpuratus clone R3-3040K16, W...    46   1.8    1
(AC181105) Strongylocentrotus purpuratus clone R3-3042E01, W...    46   1.8    1
(AC181102) Strongylocentrotus purpuratus clone R3-3047K03, W...    46   1.8    1
(AC179743) Strongylocentrotus purpuratus clone R3-1018G22, W...    46   1.8    1
(AC178248) Strongylocentrotus purpuratus clone R3-3086J1, WO...    46   1.8    1
(AC020994) Homo sapiens clone RP11-25H9, WORKING DRAFT SEQUE...    46   1.8    1
(BH528026) BOHLF10TF BOHL Brassica oleracea genomic clone BO...    46   1.8    1
(AZ765835) 1M0563D01F Mouse 10kb plasmid UUGC1M library Mus ...    46   1.8    1
(FH719485) CHO_OF5060xc04f1.ab1 CHO_OF5 Nicotiana tabacum ge...    46   1.8    1
(FH386382) CHO_OF4756xm17r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   1.8    1
(FH098447) CHO_OF3031xb06r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   1.8    1
(FH098361) CHO_OF3031xb06f1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   1.8    1
(FH061534) CHO_OF3600xg17r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   1.8    1
(ER342555) 1092344356651 Global-Ocean-Sampling_GS-34-01-01-1...    46   1.8    1
(AM623218) Entamoeba invadens IP1 GSS, clone inv122a04.p1k.        46   1.8    1
(AM608694) Entamoeba invadens IP1 GSS, clone inv094a07.q1k.        46   1.8    1
(EJ391260) 1092963934890 Global-Ocean-Sampling_GS-28-01-01-1...    46   1.8    1
(EJ230410) 1092402582687 Global-Ocean-Sampling_GS-27-01-01-1...    46   1.8    1
(EJ171092) 1092344083259 Global-Ocean-Sampling_GS-27-01-01-1...    46   1.8    1
(AL325197) Tetraodon nigroviridis genome survey sequence T7 ...    46   1.8    1
(AL324127) Tetraodon nigroviridis genome survey sequence T7 ...    46   1.8    1
(DE272804) Oryzias latipes DNA, clone: ola1-212N07.F, genomi...    46   1.8    1
(CT142763) Sus scrofa genomic clone CH242-91E20, genomic sur...    46   1.8    1
(BZ398602) EINDA44TF EI_10_12_KB Entamoeba invadens genomic ...    46   1.8    1
(BZ386506) EINCQ20TR EI_10_12_KB Entamoeba invadens genomic ...    46   1.8    1
(BZ072651) lkf19d02.b1 B.oleracea002 Brassica oleracea genom...    46   1.8    1
(BZ037743) oeh82g07.b1 B.oleracea002 Brassica oleracea genom...    46   1.8    1
(BZ036895) oed88h06.g1 B.oleracea002 Brassica oleracea genom...    46   1.8    1
(BH941643) odf06b12.b1 B.oleracea002 Brassica oleracea genom...    46   1.8    1
(EC824704) SME00010172 esmbsro2 Sawyeria marylandensis cDNA,...    46   1.8    1
(AU038207) Dictyostelium discoideum slug cDNA, clone SSH416.       46   1.8    1
(BJ385814) Dictyostelium discoideum cDNA clone:ddc56a12, 3' ...    46   1.8    1
(BJ340161) Dictyostelium discoideum cDNA clone:dda11l22, 3' ...    46   1.8    1
(GE466429) 294767223 Nasonia vitripennis Adult Female Nasoni...    46   1.8    1
(EY263388) BF01027A2E04.f1 Normalized subtracted keck librar...    46   1.8    1
(AM295250) Staphylococcus carnosus subsp. carnosus TM300 com...    46   1.8    1
(FG291788) 1108793372449 New World Screwworm Egg 9261 ESTs C...    32   1.8    3
(FG295040) 1108770722162 New World Screwworm Larvae 9387 EST...    32   1.8    3
(CP000904) Bacillus weihenstephanensis KBAB4 plasmid pBWB401...    40   1.8    8
(AY035383) Homo sapiens C21orf42 protein mRNA, complete cds,...    42   1.8    2
(FG292903) 1108770646514 New World Screwworm Larvae 9387 EST...    32   1.8    3
(AC231677) Solanum tuberosum chromosome 11 clone RH089H13, *...    38   1.8    4
(FG289171) 1108793292427 New World Screwworm Egg 9261 ESTs C...    32   1.8    3
(AC186295) Medicago truncatula chromosome 2 BAC clone mth2-2...    36   1.8    5
(FG290574) 1108793323832 New World Screwworm Egg 9261 ESTs C...    32   1.9    3
(CR456683) Zebrafish DNA sequence from clone CH211-39I13 in ...    40   1.9    5
(BX890614) Zebrafish DNA sequence from clone DKEY-46N5 in li...    36   1.9    5
(AX344564) Sequence 15 from Patent WO0200932.                      32   1.9    12
(AC095017) Drosophila melanogaster, chromosome 3R, region 89...    38   1.9    4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    30   2.0    13
(CP000993) Borrelia recurrentis A1, complete genome.               32   2.0    17
(AC214598) Populus trichocarpa clone POP052-F04, complete se...    36   2.0    7
(AL845294) Mouse DNA sequence from clone RP23-285N19 on chro...    36   2.1    3
(CP000979) Borrelia duttonii Ly plasmid pl165, complete sequ...    30   2.1    9
(CR759744) Zebrafish DNA sequence from clone CH211-200N5 in ...    36   2.1    4
(AC134032) Rattus norvegicus clone CH230-91F22, WORKING DRAF...    44   2.1    4
(AM425780) Vitis vinifera contig VV78X070458.2, whole genome...    38   2.1    3
(AC148755) Medicago truncatula clone mth2-24n16, complete se...    40   2.1    5
(AY863213) Smittium culisetae mitochondrion, complete genome.      36   2.2    5
(AJ011856) Saccharomyces cerevisiae complete mitochondrial g...    36   2.2    6
(CT571263) Medicago truncatula chromosome 5 clone mte1-7c20,...    36   2.2    8
(EU004203) Saccharomyces cerevisiae YJM789 mitochondrion, co...    36   2.2    6
(CR456633) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    38   2.3    7
(AC181573) Strongylocentrotus purpuratus clone R3-8G7, WORKI...    40   2.3    6
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    30   2.3    10
(CT033771) Medicago truncatula chromosome 5 clone mth2-15i14...    38   2.3    6
(AP007388) Lotus japonicus genomic DNA, chromosome 3, clone:...    34   2.3    6
(DD418528) NOVEL COMPOSITIONS AND METHODS IN CANCER.               36   2.4    4
(CS789537) Sequence 793 from Patent WO2005031001.                  36   2.4    4
(GN009339) Sequence 1780 from Patent EP2014669.                    36   2.4    4
(AC008563) Homo sapiens chromosome 5 clone CTC-536A23, WORKI...    34   2.4    7
(AE001362) Plasmodium falciparum 3D7 chromosome 2, complete ...    34   2.4    17
(CT990605) M.truncatula DNA sequence from clone MTH2-46O20 o...    38   2.5    5
(CR559941) Zebrafish DNA sequence from clone DKEY-161O1 in l...    44   2.5    3
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    36   2.5    7
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple...    34   2.5    19
(AC189437) Brassica rapa subsp. pekinensis clone KBrB069A23,...    42   2.6    6
(AC232536) Brassica rapa subsp. pekinensis clone KBrH001F03,...    38   2.6    6
(AY689437) Deerpox virus W-1170-84, complete genome.               32   2.6    9
(U12980) Saccharomyces cerevisiae chromosome I left arm sequ...    38   2.6    4
(CP000025) Campylobacter jejuni RM1221, complete genome.           40   2.7    17
(CP000609) Methanococcus maripaludis C5, complete genome.          32   2.7    17
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    34   2.7    11
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743...    38   2.8    5
(AX344551) Sequence 2 from Patent WO0200932.                       34   2.8    10
(CP000728) Clostridium botulinum F str. Langeland, complete ...    32   2.8    14
(AC209098) Populus trichocarpa clone POP013-K21, complete se...    38   2.8    5
(AC171611) Bos taurus clone CH240-270O4, WORKING DRAFT SEQUE...    38   2.8    7
(AC158532) Mus musculus BAC clone RP23-178C22 from chromosom...    38   2.8    5
(AC168590) Strongylocentrotus purpuratus clone R3-3065D21, W...    38   2.8    5
(FF469311) G613P6033RC4.T0 Acorn worm blastula/gastrula pCMV...    34   2.9    3
(Z50005) Caenorhabditis elegans Cosmid F16H9.                      38   2.9    5
(AM425879) Vitis vinifera contig VV78X020791.9, whole genome...    40   2.9    3
(DY481178) sh1-ayf20_l0.s2 adult sheep fracture callus pool ...    38   3.0    2
(AC209526) Solanum tuberosum chromosome 1 clone RH203E21, **...    38   3.1    5
(EU746611) Nasonia giraulti strain RV2 NADH dehydrogenase su...    36   3.1    4
(AC146555) Medicago truncatula clone mth2-10p14, complete se...    32   3.1    7
(CU179907) Medicago truncatula chromosome 5 clone mth2-130n2...    38   3.1    7
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    34   3.2    16
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    32   3.2    14
(AC074256) Homo sapiens chromosome 5 clone RP11-811N10, WORK...    40   3.3    5
(EK411716) 1095505199479 Global-Ocean-Sampling_GS-31-01-01-1...    40   3.4    2
(AC117855) Rattus norvegicus clone CH230-200F9, *** SEQUENCI...    34   3.4    2
(BX119918) Zebrafish DNA sequence from clone CH211-202H22 in...    32   3.5    2
(AC182656) Populus trichocarpa clone Pop1-122F12, complete s...    34   3.6    2
(FP067337) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   3.6    5
(CR854881) Zebrafish DNA sequence from clone CH211-198O8 in ...    36   3.6    4
(DE304984) Bombyx mori genomic DNA, BAC clone:BES_069_A05.         40   3.7    2
(BX835879) Arabidopsis thaliana Full-length cDNA 3PRIM end o...    30   3.7    3
(AY168953) Mycoplasma fermentans strain PG18 LicA (licA), an...    34   3.7    4
(EJ013760) 1095407100842 Global-Ocean-Sampling_GS-26-01-01-1...    42   3.8    2
(FC809668) Sr_pASP6_01m07_SP6 S. ratti mixed stage pAMP Stro...    38   3.8    2
(DJ358579) METHODS AND NUCLEIC ACIDS FOR THE ANALYSIS OF GEN...    42   3.8    3
(CS114298) Sequence 1056 from Patent WO2005054517.                 42   3.8    3
(CR548612) Paramecium tetraurelia macronuclear largest chrom...    32   3.9    15
(AM448978) Vitis vinifera contig VV78X005403.16, whole genom...    34   3.9    3
(BV020632) S212P60146FG6.T0 CZECHII/Ei Mus musculus STS geno...    36   3.9    2
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)...    32   3.9    13
(AM453681) Vitis vinifera contig VV78X087950.10, whole genom...    34   3.9    2
(FG288895) 1108793290853 New World Screwworm Egg 9261 ESTs C...    36   4.0    3
(EJ661245) 1092955024458 Global-Ocean-Sampling_GS-30-02-01-1...    36   4.0    2
(BX510332) Zebrafish DNA sequence from clone CH211-225M7.          36   4.0    7
(AM636238) Entamoeba dispar GSS, clone dispar35d01.q1k.            30   4.0    3
(EJ670850) 1092955056906 Global-Ocean-Sampling_GS-30-02-01-1...    36   4.0    2
(AM433273) Vitis vinifera contig VV78X102838.5, whole genome...    38   4.0    3
(BX481967) Homo sapiens mRNA; EST DKFZp686E07228_r1  (from c...    40   4.0    2
(EJ668872) 1092955050947 Global-Ocean-Sampling_GS-30-02-01-1...    40   4.1    2
(AM483803) Vitis vinifera contig VV78X155693.5, whole genome...    32   4.1    2
(CU694903) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   4.1    6
(EJ083470) 1095460071254 Global-Ocean-Sampling_GS-26-01-01-1...    42   4.2    2
(EK005171) 1092344130832 Global-Ocean-Sampling_GS-31-01-01-1...    34   4.2    2
(AC115581) Dictyostelium discoideum chromosome 2 map complem...    34   4.3    6
(L36899) Saccharomyces cerevisiae mitochondrion origin of re...    32   4.3    5
(CU929432) Zebrafish DNA sequence from clone CH73-67N22 in l...    40   4.3    4
(EJ810920) 1093017488901 Global-Ocean-Sampling_GS-30-02-01-1...    34   4.3    2
(CT027990) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   4.3    6
(DQ642846) Plasmodium falciparum HB3 apicoplast, complete ge...    38   4.4    3
(EJ081243) 1095460036325 Global-Ocean-Sampling_GS-26-01-01-1...    36   4.5    3
(AC162960) Bos taurus clone CH240-126K6, WORKING DRAFT SEQUE...    32   4.5    7
(DU064456) 73944 Tomato HindIII BAC Library Solanum lycopers...    34   4.5    3
(CP001081) Clostridium botulinum Ba4 str. 657 plasmid pCLJ, ...    34   4.5    8
(FI801657) SIR-35G24TF Sisymbrium irio BAC library SIR Sisym...    34   4.5    2
(FH204599) CHO_OF3128xb23r1.ab1 CHO_OF3 Nicotiana tabacum ge...    32   4.6    2
(DH575947) Rattus norvegicus DNA, BAC clone: RNB1-093B15, 5'...    34   4.6    2
(FP017206) Medicago truncatula chromosome 5 clone mth4-64j13...    32   4.6    8
(FC815781) Sr_pAMT7_04c06_T7 S. ratti mixed stage pAMP Stron...    30   4.7    3
(AC016565) Homo sapiens chromosome 5 clone CTC-538O12, compl...    32   4.8    6
(AM485215) Vitis vinifera contig VV78X148566.3, whole genome...    34   4.8    3
(FC815990) Sr_pAMT7_04m14_T7 S. ratti mixed stage pAMP Stron...    30   4.8    3
(AC148203) Callicebus moloch clone LB5-190B16, complete sequ...    34   4.8    6
(ED810167) ML__Ba0051J07r ML__Ba Mimulus lewisii genomic, ge...    40   4.8    2
(FC816565) Sr_pAMT7_06h17_T7 S. ratti mixed stage pAMP Stron...    30   4.9    3
(AC114699) Rattus norvegicus 19 BAC CH230-235A3 (Children's ...    38   4.9    5
(AC020420) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    38   5.0    3
(AL445563) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    36   5.0    10
(AC094590) Rattus norvegicus clone CH230-4D8, *** SEQUENCING...    38   5.0    4
(EK398710) 1095469531624 Global-Ocean-Sampling_GS-31-01-01-1...    32   5.0    3
(AP008971) Finegoldia magna ATCC 29328 DNA, complete genome.       34   5.1    20
(EJ611273) 1092962046757 Global-Ocean-Sampling_GS-29-01-01-1...    36   5.1    3
(FP017269) Brassica rapa subsp. pekinensis clone KBrH113C04,...    38   5.2    6
(AC186778) Trichinella spiralis chromosome UNK clone TS195-4...    36   5.3    5
(AL732432) Human DNA sequence from clone XXbac-92J3 on chrom...    32   5.4    4
(AC187466) Medicago truncatula chromosome 2 BAC clone mth2-6...    44   5.4    5
(CP001185) Thermosipho africanus TCF52B, complete genome.          40   5.4    18
(FC815643) Sr_pAMT7_03l16_T7 S. ratti mixed stage pAMP Stron...    30   5.5    3
(FG288894) 1108793290852 New World Screwworm Egg 9261 ESTs C...    36   5.6    3
(EJ884851) 1093018412624 Global-Ocean-Sampling_GS-30-02-01-1...    34   5.6    3
(AC125390) Medicago truncatula clone mth2-17c11, complete se...    44   5.6    4
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    32   5.6    8
(CR762441) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   5.7    9
(AM453503) Vitis vinifera, whole genome shotgun sequence, co...    38   5.8    3
(AC074353) Homo sapiens chromosome 18 clone RP11-805F19, WOR...    34   5.9    6
(AC213540) Populus trichocarpa clone POP053-A08, complete se...    36   5.9    5
(AC115364) Rattus norvegicus clone CH230-39A17, *** SEQUENCI...    34   5.9    9
(FN372310) Schistosoma mansoni genome sequence supercontig S...    40   6.0    2
(AC026414) Homo sapiens chromosome 5 clone CTD-2036A18, comp...    32   6.1    7
(FG290045) 1108793314224 New World Screwworm Egg 9261 ESTs C...    36   6.1    3
(CL065913) CH216-105L20_Sp6.1 CH216 Xenopus (Silurana) tropi...    34   6.1    3
(FG286623) 1108770723692 New World Screwworm Egg 9261 ESTs C...    32   6.1    3
(EJ154117) 1092343794805 Global-Ocean-Sampling_GS-27-01-01-1...    30   6.2    3
(CU498872) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   6.2    5
(EF494739) Blastocystis sp. DMP/02-328 mitochondrion, comple...    36   6.3    5
(FG291984) 1108383360251 New World Screwworm Larvae 9387 EST...    36   6.4    3
(AP005534) Oryza sativa Japonica Group genomic DNA, chromoso...    34   6.4    8
(FG294975) 1108770721988 New World Screwworm Larvae 9387 EST...    36   6.4    3
(AC235190) Glycine max strain Williams 82 clone GM_WBb0011N2...    36   6.5    5
(CR962134) Medicago truncatula chromosome 5 clone mte1-40n1,...    32   6.5    9
(AB439529) Asterodiaspis sp. TY267 mitochondrial COX1, COX2 ...    40   6.6    2
(AC189399) Brassica rapa subsp. pekinensis clone KBrB056I08,...    36   6.6    5
(AL935282) Zebrafish DNA sequence from clone CH211-281O21 in...    38   6.8    5
(AC103693) Homo sapiens chromosome 18, clone CTD-2522C24, co...    34   6.8    7
(EU643484) Adineta vaga clone Av198_A basic region leucine z...    40   6.9    3
(AL157735) Arabidopsis thaliana DNA chromosome 3, BAC clone ...    44   6.9    3
(BX546443) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   7.0    8
(AC016444) Homo sapiens chromosome 11 clone RP11-384I14 map ...    32   7.0    6
(ER689810) SB_BBc198-P16.F SB_BBc Sorghum bicolor genomic 5'...    32   7.0    3
(CU914135) Medicago truncatula chromosome 5 clone mth4-3n15,...    42   7.0    6
(AM439827) Vitis vinifera contig VV78X243395.6, whole genome...    42   7.0    2
(AL845362) Zebrafish DNA sequence from clone CH211-142H2 in ...    44   7.0    1
(BV391372) S243P687FG5.T0 CaliforniaCoyote Canis latrans STS...    44   7.0    1
(AC115891) Mus musculus chromosome 10, clone RP24-421G4, com...    44   7.0    1
(CU019619) S.lycopersicum DNA sequence from clone LE_HBa-24G...    44   7.0    1
(AP009682) Lotus japonicus genomic DNA, chromosome 1, clone:...    44   7.0    1
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN...    44   7.0    1
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN...    44   7.0    1
(AP005452) Oryza sativa Japonica Group genomic DNA, chromoso...    44   7.0    1
(AM470846) Vitis vinifera, whole genome shotgun sequence, co...    44   7.0    1
(AM465014) Vitis vinifera contig VV78X160151.4, whole genome...    44   7.0    1
(AM450116) Vitis vinifera contig VV78X276233.9, whole genome...    44   7.0    1
(AM447615) Vitis vinifera contig VV78X155046.1, whole genome...    44   7.0    1
(AL162459) Arabidopsis thaliana DNA chromosome 3, BAC clone ...    44   7.0    1
(AC235128) Glycine max strain Williams 82 clone GM_WBa0048K0...    44   7.0    1
(AC235117) Glycine max strain Williams 82 clone GM_WBa0027O0...    44   7.0    1
(AC235103) Glycine max strain Williams 82 clone GM_WBa0007H2...    44   7.0    1
(AC235100) Glycine max strain Williams 82 clone GM_WBa0002J1...    44   7.0    1
(AC144735) Oryza sativa Japonica Group chromosome 5 clone OS...    44   7.0    1
(AC104711) Oryza sativa Japonica Group chromosome 5 clone OJ...    44   7.0    1
(EA683819) Sequence 62698 from patent US 7365185.                  44   7.0    1
(EA646691) Sequence 25570 from patent US 7365185.                  44   7.0    1
(DL005612) NUCLEIC ACID PROBES AND NUCLEIC ACID ANALOG PROBES.     44   7.0    1
(CS459537) Sequence 18 from Patent WO2006117596.                   44   7.0    1
(AY149028) Plasmodium chabaudi chabaudi strain AS clone YAC1...    44   7.0    1
(AL354736) Human DNA sequence from clone RP11-205B18 on chro...    44   7.0    1
(AL158035) Human DNA sequence from clone RP1-97J1 on chromos...    44   7.0    1
(AC221044) Homo sapiens FOSMID clone ABC10-45544000P19 from ...    44   7.0    1
(AC208503) Homo sapiens FOSMID clone ABC9-46213700I17 from c...    44   7.0    1
(AC108068) Homo sapiens BAC clone RP11-574H22 from 2, comple...    44   7.0    1
(AC102948) Homo sapiens chromosome 17, clone RP11-635H17, co...    44   7.0    1
(AC008750) Homo sapiens chromosome 19 clone CTD-2616J11, com...    44   7.0    1
(AC007621) Homo sapiens 12 BAC RP11-757G14 (Roswell Park Can...    44   7.0    1
(AC156191) Bos taurus clone CH240-48I4, WORKING DRAFT SEQUEN...    44   7.0    1
(AC143277) Macaca mulatta clone CH250-270B18, *** SEQUENCING...    44   7.0    1
(AC141912) Rattus norvegicus clone CH230-96E23, WORKING DRAF...    44   7.0    1
(AC134953) Pan troglodytes clone CH251-319A13, WORKING DRAFT...    44   7.0    1
(AC134687) Homo sapiens chromosome 17 clone RP11-782G7 map 1...    44   7.0    1
(AC118135) Homo sapiens chromosome 2 clone RP13-858D10, WORK...    44   7.0    1
(CU856018) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   7.0    1
(CU468525) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   7.0    1
(CU076069) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   7.0    1
(BX649504) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   7.0    1
(AL954723) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   7.0    1
(AC232863) Solanum lycopersicum chromosome 6 clone C06SLm000...    44   7.0    1
(AC232609) Choloepus hoffmanni clone CH281-14P11, WORKING DR...    44   7.0    1
(AC191915) Spermophilus tridecemlineatus clone VMRC20-363H20...    44   7.0    1
(AC191911) Spermophilus tridecemlineatus clone VMRC20-200L11...    44   7.0    1
(AC189347) Brassica rapa subsp. pekinensis clone KBrB042N23,...    44   7.0    1
(AC166885) Oryctolagus cuniculus clone LB1-88F12, WORKING DR...    44   7.0    1
(AC025487) Homo sapiens chromosome 17 clone RP11-773J17 map ...    44   7.0    1
(AC011056) Homo sapiens clone RP11-11D3, LOW-PASS SEQUENCE S...    44   7.0    1
(AQ864582) nbeb0023B12f CUGI Rice BAC Library (EcoRI) Oryza ...    44   7.0    1
(AQ864384) nbeb0023B11f CUGI Rice BAC Library (EcoRI) Oryza ...    44   7.0    1
(FP022211) Brassica napus GSS, clone JBnB043C14, end read, p...    44   7.0    1
(FI762142) BOT01-112D6TF BOT01 Brassica oleracea genomic clo...    44   7.0    1
(FI756946) BOT01-115C1TF BOT01 Brassica oleracea genomic clo...    44   7.0    1
(FI685432) BOT01-11E6TF BOT01 Brassica oleracea genomic clon...    44   7.0    1
(FH317930) CHO_OF4491xa18f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   7.0    1
(ET291731) S0172C06_T7 CHORI-214 Salmo salar genomic clone S...    44   7.0    1
(ET285766) S0218P09_T7 CHORI-214 Salmo salar genomic clone S...    44   7.0    1
(ER579621) 1093015829652 Global-Ocean-Sampling_GS-36-01-01-2...    44   7.0    1
(ER492540) 1093015332116 Global-Ocean-Sampling_GS-35-01-01-1...    44   7.0    1
(EK241763) 1095460228178 Global-Ocean-Sampling_GS-31-01-01-1...    44   7.0    1
(EK206940) 1095460077776 Global-Ocean-Sampling_GS-31-01-01-1...    44   7.0    1
(EJ694197) 1092956013247 Global-Ocean-Sampling_GS-30-02-01-1...    44   7.0    1
(EJ481524) 1095403471640 Global-Ocean-Sampling_GS-28-01-01-1...    44   7.0    1
(EJ295221) 1095388032009 Global-Ocean-Sampling_GS-27-01-01-1...    44   7.0    1
(EJ204478) 1092344328404 Global-Ocean-Sampling_GS-27-01-01-1...    44   7.0    1
(EJ069821) 1095458074510 Global-Ocean-Sampling_GS-26-01-01-1...    44   7.0    1
(EJ006441) 1091139219463 Global-Ocean-Sampling_GS-26-01-01-1...    44   7.0    1
(EI859115) CAH1-5A15TV CAA1Ba Cicer arietinum genomic clone ...    44   7.0    1
(EI855192) CAH1-21N20TR CAA1Ba Cicer arietinum genomic clone...    44   7.0    1
(EI847265) CAH1-19K19TR CAA1Ba Cicer arietinum genomic clone...    44   7.0    1
(EI847102) CAH1-1P6TV CAA1Ba Cicer arietinum genomic clone C...    44   7.0    1
(ED675667) GM_WBb0006D09.r GM_WBb Glycine max genomic clone ...    44   7.0    1
(ED662550) GM_WBa0086J08.f GM_WBa Glycine max genomic clone ...    44   7.0    1
(ED523262) KBrB111G10R KBrB, Brassica rapa BamHI BAC library...    44   7.0    1
(DU959982) 230924 Tomato MboI BAC Library Solanum lycopersic...    44   7.0    1
(DU950176) 215282 Tomato MboI BAC Library Solanum lycopersic...    44   7.0    1
(DU865132) 81524 Tomato HindIII BAC Library Solanum lycopers...    44   7.0    1
(DU058976) 90911 Tomato HindIII BAC Library Solanum lycopers...    44   7.0    1
(DE383093) Bombyx mori genomic DNA, BAC clone:5A6F.                44   7.0    1
(DE382673) Bombyx mori genomic DNA, BAC clone:4I4E.                44   7.0    1
(CZ948009) 293245 Tomato EcoRI BAC Library Solanum lycopersi...    44   7.0    1
(CZ501960) GMW2-6D9a.g1 GMW2 Glycine max genomic, genomic su...    44   7.0    1
(CW944603) TcB26.4_B04_T7 Tribolium BAC library Tribolium ca...    44   7.0    1
(CU105484) Equus caballus GSS, BAC clone CH241-211N23, SP6 e...    44   7.0    1
(CG818508) SOYEV96TV LargeInsertSoybeanGenLib Glycine max ge...    44   7.0    1
(CG769851) TcB50.3_E02_SP6 Tribolium BAC library Tribolium c...    44   7.0    1
(CC942764) BOIDL37TR BO_1.4_1.6_KB_nuc Brassica oleracea gen...    44   7.0    1
(BZ457051) BONEK06TR BO_1.6_2_KB_tot Brassica oleracea genom...    44   7.0    1
(BZ035884) oem78g06.g1 B.oleracea002 Brassica oleracea genom...    44   7.0    1
(BZ014752) oeh10f06.b1 B.oleracea002 Brassica oleracea genom...    44   7.0    1
(BZ011824) oeg74c03.g1 B.oleracea002 Brassica oleracea genom...    44   7.0    1

>(AU072808) Dictyostelium discoideum slug cDNA, clone SSF136.
          Length = 240

 Score =  383 bits (193), Expect(2) = e-114
 Identities = 193/193 (100%)
 Strand = Plus / Plus


Query: 48  tgatggaattaggatttgaaaatgatattgatttattaaatcaatatcaaacaattcaat 107
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48  tgatggaattaggatttgaaaatgatattgatttattaaatcaatatcaaacaattcaat 107


Query: 108 caagaaaaacaaaagattataaaaagtttttagaaattaaacaagagaataagaatcaac 167
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 caagaaaaacaaaagattataaaaagtttttagaaattaaacaagagaataagaatcaac 167


Query: 168 atttagatattatctcatcattttgggatgtaattgttattactgctattgattcacttc 227
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 atttagatattatctcatcattttgggatgtaattgttattactgctattgattcacttc 227


Query: 228 aaaaggaatacta 240
           |||||||||||||
Sbjct: 228 aaaaggaatacta 240

 Score = 61.9 bits (31), Expect(2) = e-114
 Identities = 31/31 (100%)
 Strand = Plus / Plus


Query: 1  tataaatagatctattataaagaaataatta 31
          |||||||||||||||||||||||||||||||
Sbjct: 1  tataaatagatctattataaagaaataatta 31

 Score = 46.1 bits (23), Expect(2) = 0.084
 Identities = 26/27 (96%)
 Strand = Plus / Minus


Query: 70 tgatattgatttattaaatcaatatca 96
          ||||||||||||| |||||||||||||
Sbjct: 96 tgatattgatttaataaatcaatatca 70

 Score = 26.3 bits (13), Expect(2) = 0.084
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 277 aattccatcattt 289
           |||||||||||||
Sbjct: 57  aattccatcattt 45

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 1,087,644,886
Number of extensions: 80114130
Number of successful extensions: 7340153
Number of sequences better than 10.0: 614
Length of query: 676
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 652
Effective length of database: 102,084,959,077
Effective search space: 66559393318204
Effective search space used: 66559393318204
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U05079-1 (Contig-U05079-1Q) /CSM_Contig/Contig-U05079-1Q.Seq.d
         (676 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC168244_1(BC168244|pid:none) Rattus norvegicus fucose-1-phospha...   132   1e-29
AJ276066_1(AJ276066|pid:none) Rattus norvegicus mRNA for putativ...   132   1e-29
BC110551_1(BC110551|pid:none) Mus musculus fucose-1-phosphate gu...   130   4e-29
AK028640_1(AK028640|pid:none) Mus musculus 10 days neonate skin ...   130   4e-29
AJ276067_1(AJ276067|pid:none) Mus musculus mRNA for putative GDP...   130   4e-29
BT045716_1(BT045716|pid:none) Salmo salar clone ssal-rgf-529-145...   130   5e-29
AF017445_1(AF017445|pid:none) Homo sapiens GDP-L-fucose pyrophos...   128   1e-28
BC155808_1(BC155808|pid:none) Danio rerio zgc:110694, mRNA (cDNA...   124   3e-27
BC095375_1(BC095375|pid:none) Danio rerio zgc:110694, mRNA (cDNA...   106   6e-22
CP001323_334(CP001323|pid:none) Micromonas sp. RCC299 chromosome...    96   1e-18
BC088089_1(BC088089|pid:none) Rattus norvegicus fucose-1-phospha...    79   2e-13
CP000473_559(CP000473|pid:none) Solibacter usitatus Ellin6076, c...    76   1e-12
BX640903_1(BX640903|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0...    75   1e-12
AB208941_1(AB208941|pid:none) Homo sapiens mRNA for TNNI3 intera...    75   1e-12
AC144389_1(AC144389|pid:none) Medicago truncatula clone mth2-25e...    65   2e-09
Z29560_10(Z29560|pid:none) Caenorhabditis elegans Cosmid K03H1, ...    62   2e-08
AE015928_2128(AE015928|pid:none) Bacteroides thetaiotaomicron VP...    59   1e-07
AP006841_2587(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,...    56   1e-06
CP000139_1562(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    54   6e-06
AC134237_21(AC134237|pid:none) Oryza sativa (japonica cultivar-g...    53   7e-06
(Q8N0W3) RecName: Full=L-fucose kinase;          Short=Fucokinas...    38   0.32
AJ534942_1(AJ534942|pid:none) Mus musculus mRNA for L-fucose kin...    37   0.42
AJ297482_1(AJ297482|pid:none) Mus musculus mRNA for L-fucose kin...    37   0.42
CP001080_230(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1...    37   0.72
AM431228_4(AM431228|pid:none) Vitis vinifera contig VV78X278735....    35   2.1
S69783(S69783;PS0047)outer membrane protein 1A precursor - Diche...    35   2.1
(P19577) RecName: Full=Extracellular serine protease;          E...    35   2.7
AM494953_50(AM494953|pid:none) Leishmania braziliensis chromosom...    35   2.7
CP001229_1224(CP001229|pid:none) Sulfurihydrogenibium azorense A...    35   2.7
FJ563239_1(FJ563239|pid:none) Pachyphyllum sp. Trujillo 359 vouc...    34   4.6
FM992692_304(FM992692|pid:none) Candida dubliniensis CD36 chromo...    34   4.6
AM910983_16(AM910983|pid:none) Plasmodium knowlesi strain H chro...    34   4.6
AP009049_127(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ...    33   7.9
CP000673_135(CP000673|pid:none) Clostridium kluyveri DSM 555, co...    33   7.9
FJ563610_1(FJ563610|pid:none) Pachyphyllum sp. Whitten 1703 vouc...    33   7.9
FJ563700_1(FJ563700|pid:none) Pachyphyllum sp. Whitten 2313 vouc...    33   7.9
AK293794_1(AK293794|pid:none) Homo sapiens cDNA FLJ53723 complet...    33   7.9
EU677193_26(EU677193|pid:none) Oedogonium cardiacum strain SAG 5...    33   7.9

>BC168244_1(BC168244|pid:none) Rattus norvegicus fucose-1-phosphate
           guanylyltransferase, mRNA (cDNA clone MGC:188371
           IMAGE:5600080), complete cds.
          Length = 590

 Score =  132 bits (331), Expect = 1e-29
 Identities = 73/188 (38%), Positives = 108/188 (57%)
 Frame = +2

Query: 95  QTIQSRKTKDYKKFLEIKQENKNQHLDIISSFWDVIVITAIDSLQKEYYEQVLKEKMNQN 274
           +T++    +  ++F E++ +           FWDV+ ITA D  Q+  Y+Q L EK+ +
Sbjct: 2   ETLREATLRKLRRFSELRGKPV-----AAGEFWDVVAITAADEKQELAYKQQLSEKLRRK 56

Query: 275 QIPSFIPYVVISDPVGEKIGCGGSTLYVLKTLSTIFGDDKIKNMKILLLHAGGYSKRLPN 454
           ++P  + Y V  DP G KIG GGSTL  L+ L +++GD+   + K+LL+H+GGYS+RLPN
Sbjct: 57  ELPLGVQYHVFPDPAGTKIGNGGSTLCSLQCLESLYGDE-WNSFKVLLIHSGGYSQRLPN 115

Query: 455 HSTTGKIFASIPCTLGMGGXXXXXXXXXXXSKLQACSMLEIKLIILIDIPKRMKPGVFLA 634
            S  GKIF ++P  LG                     MLE+KL + +D P  MKPGV +
Sbjct: 116 ASALGKIFTALP--LGE----------------PIYQMLELKLAMYVDFPSHMKPGVLVT 157

Query: 635 CSDDIELF 658
           C+DDIEL+
Sbjct: 158 CADDIELY 165

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 913,278,014
Number of extensions: 17484431
Number of successful extensions: 48619
Number of sequences better than 10.0: 38
Number of HSP's gapped: 48578
Number of HSP's successfully gapped: 39
Length of query: 225
Length of database: 1,061,185,681
Length adjustment: 124
Effective length of query: 101
Effective length of database: 655,898,129
Effective search space: 66245711029
Effective search space used: 66245711029
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

 psg: 0.54  gvh: 0.33  alm: 0.34  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 32.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U05079-1 is nuc