| Contig-U05065-1 |
| Contig ID |
Contig-U05065-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
751 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
1983531 |
| End point |
1984284 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U05065 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 7.10 |
| Homology vs DNA |
Query= Contig-U05065-1 (Contig-U05065-1Q) /CSM_Contig/Contig-U05065-1Q.Seq.d
(751 letters)
Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C84905) Dictyostelium discoideum slug cDNA, clone SSE843. 942 0.0 1
(AU072553) Dictyostelium discoideum slug cDNA, clone SSE843. 345 e-123 2
(BG224750) kp50c01.y1 TBN95TM-SSFH Strongyloides stercoralis... 52 3e-04 2
(EY092635) CAZI20825.fwd CAZI Artemisia annua normalized lea... 54 0.008 1
(AK322794) Solanum lycopersicum cDNA, clone: LEFL1043BD11, H... 52 0.032 1
(EL932306) Centeaurea_plate-005_E24.trimmed.seq Centaurea no... 52 0.032 1
(EW714003) RS1A323TV RS1(AR) Raphanus sativus var. oleiformi... 52 0.032 1
(EW714002) RS1A323TF RS1(AR) Raphanus sativus var. oleiformi... 52 0.032 1
(BZ063761) lkz72e02.b1 B.oleracea002 Brassica oleracea genom... 44 0.081 2
(ES905911) BNARO5GH_T3_007_H12_29NOV2006_082 Brassica napus ... 44 0.091 2
(EA374851) Sequence 87 from patent US 7314971. 50 0.13 1
(AR898678) Sequence 87 from patent US 7071375. 50 0.13 1
(CZ173733) MIAA-27J11b.g1 Meloidogyne incognita BAC end sequ... 48 0.50 1
(AC215959) Procavia capensis clone CH280-166M8, WORKING DRAF... 44 0.95 3
(FF704510) XABT112500.rev Gateway compatible cien cDNA libra... 44 1.00 2
(CT737382) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.4 4
(AM453759) Vitis vinifera, whole genome shotgun sequence, co... 46 2.0 1
(AC214890) Procavia capensis clone CH280-370N10, WORKING DRA... 46 2.0 1
(FH980564) CHO_OF6828xa23f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 2.0 1
(DV616416) EST1219412 Glossina morsitans morsitans Fat body ... 46 2.0 1
(DT518780) WS02439.B21_D21 PTxD-ICC-N-A-14 Populus trichocar... 46 2.0 1
(GH454795) JN02008X1_B05 Mouse P7-10 subtracted cDNA library... 46 2.0 1
(EU579455) Brassica oleracea clone BAC B77C13, complete sequ... 40 2.1 2
(AC170539) Bos taurus clone CH240-231M16, WORKING DRAFT SEQU... 38 3.1 5
(AB063171) Staphylococcus hominis DNA, staphylococcal casset... 36 3.3 4
(BF182443) 601804209F1 NCI_CGAP_Mam5 Mus musculus cDNA clone... 42 3.8 2
(AC105312) Homo sapiens BAC clone RP11-17C4 from 4, complete... 36 4.1 5
(BI525946) 602926658F1 NCI_CGAP_Lu33 Mus musculus cDNA clone... 42 4.2 2
(FE808185) CCAG27853.b1 CCAG Petrolisthes cinctipes heart, g... 40 4.3 2
(AM462477) Vitis vinifera, whole genome shotgun sequence, co... 32 4.6 7
(CB947404) AGENCOURT_13591841 NIH_MGC_177 Mus musculus cDNA ... 42 4.8 2
(CK790021) AGENCOURT_18670620 NIH_MGC_189 Mus musculus cDNA ... 42 4.9 2
(AR345401) Sequence 12 from patent US 6583275. 32 5.1 2
(AW413295) uq59f11.y1 Mione mouse WTB Mus musculus cDNA clon... 40 7.3 2
(BX005073) Zebrafish DNA sequence from clone CH211-129N18. 44 7.8 1
(AC236460) Xenopus laevis clone CH219-74I8, complete sequence. 44 7.8 1
(AC093570) Mus musculus strain C57BL/6J chromosome 5 clone r... 44 7.8 1
(BT013360) Lycopersicon esculentum clone 135353R, mRNA seque... 44 7.8 1
(AM473956) Vitis vinifera contig VV78X051255.4, whole genome... 44 7.8 1
(AM433710) Vitis vinifera contig VV78X205934.12, whole genom... 44 7.8 1
(AC141112) Medicago truncatula clone mth2-15m12, complete se... 44 7.8 1
(CQ492901) Sequence 24768 from Patent WO0160860. 44 7.8 1
(BD293762) GTP-binding associated proteins. 44 7.8 1
(AX077638) Sequence 93 from Patent WO0105970. 44 7.8 1
(BC028352) Homo sapiens TBC1 domain family, member 15, mRNA ... 44 7.8 1
(AL833639) Homo sapiens mRNA; cDNA DKFZp686M1379 (from clone... 44 7.8 1
(AK297626) Homo sapiens cDNA FLJ58591 complete cds, highly s... 44 7.8 1
(AK225747) Homo sapiens mRNA for TBC1 domain family, member ... 44 7.8 1
(AC090109) Homo sapiens 12q BAC RP11-89M22 (Roswell Park Can... 44 7.8 1
(AC089984) Homo sapiens 12q BAC RP11-2H8 (Roswell Park Cance... 44 7.8 1
(AC142562) Bos taurus clone RP42-371H23, WORKING DRAFT SEQUE... 44 7.8 1
(AC127624) Rattus norvegicus clone CH230-263L13, *** SEQUENC... 44 7.8 1
(AC126566) Homo sapiens clone RP11-790C17, *** SEQUENCING IN... 44 7.8 1
(FP325100) Brassica rapa subsp. pekinensis clone KBrB059F05,... 44 7.8 1
(AC094369) Rattus norvegicus clone CH230-3O4, *** SEQUENCING... 44 7.8 1
(CT954271) M.truncatula DNA sequence *** SEQUENCING IN PROGR... 44 7.8 1
(AC235665) Medicago truncatula clone mth2-80i2, WORKING DRAF... 44 7.8 1
(AC218248) Bos taurus clone CH240-289H18, WORKING DRAFT SEQU... 44 7.8 1
(AC216328) Procavia capensis clone CH280-261L19, WORKING DRA... 44 7.8 1
(AC009759) Homo sapiens clone RP11-2H8, WORKING DRAFT SEQUEN... 44 7.8 1
(AL157464) Homo sapiens mRNA; cDNA DKFZp761D0223 (from clone... 44 7.8 1
(AZ520277) RPCI-11-238C4.TJ RPCI-11 Homo sapiens genomic clo... 44 7.8 1
(EI065940) hhc0011dd12.b1 hhc Oryza granulata genomic clone ... 44 7.8 1
(ED736494) GM_WBb0095P04.f GM_WBb Glycine max genomic clone ... 44 7.8 1
(ED529610) KBrB120B01R KBrB, Brassica rapa BamHI BAC library... 44 7.8 1
(ED516921) KBrB102C21F KBrB, Brassica rapa BamHI BAC library... 44 7.8 1
(DX449267) BE2018_L22_R IASMA L2 HindIII BAC library Vitis v... 44 7.8 1
(DX443915) BE1066_L18_R IASMA L1 HindIII BAC library Vitis v... 44 7.8 1
(DX443910) BE1066_L12_R IASMA L1 HindIII BAC library Vitis v... 44 7.8 1
(DX443788) BE1066_E13_R IASMA L1 HindIII BAC library Vitis v... 44 7.8 1
(DX443785) BE1066_E07_R IASMA L1 HindIII BAC library Vitis v... 44 7.8 1
(DX431493) BE1030_A12_F IASMA L1 HindIII BAC library Vitis v... 44 7.8 1
(DX050799) KBrB053N21R KBrB, Brassica rapa BamHI BAC library... 44 7.8 1
(DU866082) 82934 Tomato HindIII BAC Library Solanum lycopers... 44 7.8 1
(DU114802) KBrH095K24F Brassica rapa BAC library KBrH Brassi... 44 7.8 1
(DQ053764) Homo sapiens FLJ12085 gene, VIRTUAL TRANSCRIPT, p... 44 7.8 1
(CU946202) Brassica napus GSS, clone JBnB017H19, end read, p... 44 7.8 1
(EH759581) CNSL5756.b1_H24.ab1 CNS(LMS) yellow starthistle C... 44 7.8 1
(EH734928) CNMM8001.b1_B10.ab1 CNM(LMS) spotted knapweed Cen... 44 7.8 1
(EH730821) CNMM3855.b1_M03.ab1 CNM(LMS) spotted knapweed Cen... 44 7.8 1
(EH716684) CNML3019.b1_F12.ab1 CNM(LMS) spotted knapweed Cen... 44 7.8 1
(EH716130) CNML2458.b1_D15.ab1 CNM(LMS) spotted knapweed Cen... 44 7.8 1
(AV675381) Ciona intestinalis cDNA clone:citb12d4 : 5' end, ... 44 7.8 1
(DY678608) TT1AW31TH Tetrahymena thermophila EST library str... 44 7.8 1
(DN918483) MCF7RNAL24O17TF Human MCF7 breast cancer cell lin... 44 7.8 1
(CX166892) HESC2_45_G11.g1_A035 NIH_MGC_258 Homo sapiens cDN... 44 7.8 1
(CT793687) Paramecium tetraurelia 5-PRIME EST from clone LK0... 44 7.8 1
(CD836618) BN45.049F01F020103 BN45 Brassica napus cDNA clone... 44 7.8 1
(BX505268) Homo sapiens mRNA; EST DKFZp686E19197_r1 (from c... 44 7.8 1
(BW486169) Ciona intestinalis cDNA, clone:cima055j05, 5'end,... 44 7.8 1
(BW424685) Ciona intestinalis cDNA, clone:cima849j12, 3'end,... 44 7.8 1
(BW354071) Ciona intestinalis cDNA, clone:cima802m06, 5'end,... 44 7.8 1
(BW337262) Ciona intestinalis cDNA, clone:ciem805i01, 5'end,... 44 7.8 1
(BW301819) Ciona intestinalis cDNA, clone:cinc023f19, 5' end... 44 7.8 1
(BW299977) Ciona intestinalis cDNA, clone:cinc007k07, 5' end... 44 7.8 1
(BW264718) Ciona intestinalis cDNA, clone:cign039b19, 5' end... 44 7.8 1
(BW264453) Ciona intestinalis cDNA, clone:cign038d14, 5' end... 44 7.8 1
(BW052958) Ciona intestinalis cDNA, clone:cibd077b14, 5' end... 44 7.8 1
(BW047403) Ciona intestinalis cDNA, clone:cibd061h15, 5' end... 44 7.8 1
(BW045972) Ciona intestinalis cDNA, clone:cibd005d21, 5' end... 44 7.8 1
(BW043356) Ciona intestinalis cDNA, clone:cibd052g19, 5' end... 44 7.8 1
(BW043106) Ciona intestinalis cDNA, clone:cibd051l14, 5' end... 44 7.8 1
(BW036743) Ciona intestinalis cDNA, clone:cibd031j19, 5' end... 44 7.8 1
(BW034196) Ciona intestinalis cDNA, clone:cibd025c19, 5' end... 44 7.8 1
(BW030523) Ciona intestinalis cDNA, clone:cibd015k09, 5' end... 44 7.8 1
(BQ996641) QGG13G09.yg.ab1 QG_EFGHJ lettuce serriola Lactuca... 44 7.8 1
(BP276636) Homo sapiens cDNA clone: KDN06890, Sugano cDNA li... 44 7.8 1
(BG772276) 602722563F1 NIH_MGC_97 Homo sapiens cDNA clone IM... 44 7.8 1
(BG755799) 602715827F1 NIH_MGC_48 Homo sapiens cDNA clone IM... 44 7.8 1
(BG387556) 602412372F1 NIH_MGC_92 Homo sapiens cDNA clone IM... 44 7.8 1
(BG251331) 602366166F1 NIH_MGC_90 Homo sapiens cDNA clone IM... 44 7.8 1
(BE461330) EST412749 tomato breaker fruit, TIGR Solanum lyco... 44 7.8 1
(GE581846) CCPU6150.b1_K01.ab1 CCP(UWX) Globe Artichoke Cyna... 44 7.8 1
(GE564410) CCHT22307.b1_E09.ab1 CCHT Niger Seed Guizotia aby... 44 7.8 1
(FK076241) XABT133633.g1 Gateway compatible cien cDNA librar... 44 7.8 1
(FF982272) CBWU96323.b1 Yutaka Satou unpublished cDNA librar... 44 7.8 1
(FF860188) CBWU7947.b1 Yutaka Satou unpublished cDNA library... 44 7.8 1
(FF845356) EST_tthy_evl_884495 tthy_evl Thymallus thymallus ... 44 7.8 1
(FF844706) EST_tthy_evl_880693 tthy_evl Thymallus thymallus ... 44 7.8 1
(FF844705) EST_tthy_evl_879541 tthy_evl Thymallus thymallus ... 44 7.8 1
(FF842344) EST_tthy_evl_878652 tthy_evl Thymallus thymallus ... 44 7.8 1
(EX294359) 1607920_5_L22_085 PY06 Carica papaya cDNA, mRNA s... 44 7.8 1
(EX274250) 1454796_5_L18_069 PY06 Carica papaya cDNA, mRNA s... 44 7.8 1
(EX251807) PY04112X1E03.f1 PY04 Carica papaya cDNA, mRNA seq... 44 7.8 1
(EX251401) PY04123X1G07.f1 PY04 Carica papaya cDNA, mRNA seq... 44 7.8 1
(EX250331) PY04130X1G06.f1 PY04 Carica papaya cDNA, mRNA seq... 44 7.8 1
(EX056959) BR041603 salt-treated whole plant cDNA library KB... 44 7.8 1
>(C84905) Dictyostelium discoideum slug cDNA, clone SSE843.
Length = 580
Score = 942 bits (475), Expect = 0.0
Identities = 477/478 (99%)
Strand = Plus / Plus
Query: 174 gtggtgtctcaaaagaggtggaatgtttttggtgtttcaaaggtttaatggatagattgg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggtgtctcaaaagaggtggaatgtttttggtgtttcaaaggtttaatggatagattgg 60
Query: 234 agagtaattttcataaggatcnaaatggtatgcatcatcaattatctacactttcaaagt 293
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agagtaattttcataaggatccaaatggtatgcatcatcaattatctacactttcaaagt 120
Query: 294 tattgaaattcatcgatttggaactttacactcatttagaggcaaataatggtggtaata 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattgaaattcatcgatttggaactttacactcatttagaggcaaataatggtggtaata 180
Query: 354 tgtactttttctttcaatcggttttaatttgtttcaagagggaattcccatttcatgatg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtactttttctttcaatcggttttaatttgtttcaagagggaattcccatttcatgatg 240
Query: 414 tactcacactttgggaaatactttggagtaattatatgacaaagaatttaccaatcttta 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactcacactttgggaaatactttggagtaattatatgacaaagaatttaccaatcttta 300
Query: 474 tgtgtctatcaattttaatcaaagaaagaaatcaaattttagatgaaaatatggcttttg 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgtctatcaattttaatcaaagaaagaaatcaaattttagatgaaaatatggcttttg 360
Query: 534 atcaaatcttgaaattaatcaatgaaaaagcaaatagaatggatttggaagacattctag 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcaaatcttgaaattaatcaatgaaaaagcaaatagaatggatttggaagacattctag 420
Query: 594 tcgatgctgagtctatggttagatatttcataattaaacaaatgtcaattgataccga 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgatgctgagtctatggttagatatttcataattaaacaaatgtcaattgataccga 478
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 884,127,429
Number of extensions: 55676588
Number of successful extensions: 4334397
Number of sequences better than 10.0: 129
Length of query: 751
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 727
Effective length of database: 102,084,959,077
Effective search space: 74215765248979
Effective search space used: 74215765248979
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.31 |
| Homology vs Protein |
Query= Contig-U05065-1 (Contig-U05065-1Q) /CSM_Contig/Contig-U05065-1Q.Seq.d
(751 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT064954_1(BT064954|pid:none) Zea mays full-length cDNA clone ZM... 141 8e-47
AK068743_1(AK068743|pid:none) Oryza sativa Japonica Group cDNA c... 137 1e-45
AB025606_8(AB025606|pid:none) Arabidopsis thaliana genomic DNA, ... 135 4e-44
AP007164_135(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 140 1e-43
AM270336_37(AM270336|pid:none) Aspergillus niger contig An15c009... 139 3e-43
AM920435_1309(AM920435|pid:none) Penicillium chrysogenum Wiscons... 138 5e-43
CU640366_1116(CU640366|pid:none) Podospora anserina genomic DNA ... 132 4e-40
AL451013_2(AL451013|pid:none) Neurospora crassa DNA linkage grou... 133 3e-39
(P09379) RecName: Full=GTPase-activating protein GYP7; AltName: ... 130 2e-37
B26955(B26955)hypothetical protein - yeast (Yarrowia lipolytica)... 130 2e-37
(Q9UUH7) RecName: Full=GTPase-activating protein gyp7; AltName: ... 125 5e-37
AP006852_322(AP006852|pid:none) Candida albicans genomic DNA, ch... 125 2e-35
FN392319_257(FN392319|pid:none) Pichia pastoris GS115 chromosome... 123 1e-34
Z93394_7(Z93394|pid:none) Caenorhabditis elegans YAC Y48E1C, com... 108 4e-34
(Q6BU76) RecName: Full=GTPase-activating protein GYP7; AltName: ... 120 1e-33
AE016815_32(AE016815|pid:none) Ashbya gossypii (= Eremothecium g... 118 5e-33
CR382124_787(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 111 8e-30
CR857250_1(CR857250|pid:none) Pongo abelii mRNA; cDNA DKFZp469P1... 132 9e-30
BX950194_6(BX950194|pid:none) Zebrafish DNA sequence from clone ... 132 1e-29
DQ054831_1(DQ054831|pid:none) Mus musculus TBC1 domain family me... 131 3e-29
(Q9CXF4) RecName: Full=TBC1 domain family member 15; &AK014477_... 131 3e-29
AK162115_1(AK162115|pid:none) Mus musculus in vitro fertilized e... 131 3e-29
AK292306_1(AK292306|pid:none) Homo sapiens cDNA FLJ77374 complet... 130 4e-29
(Q8TC07) RecName: Full=TBC1 domain family member 15; 130 4e-29
AB449901_1(AB449901|pid:none) Homo sapiens TBC1D15 mRNA for TBC1... 130 4e-29
BC028352_1(BC028352|pid:none) Homo sapiens TBC1 domain family, m... 130 6e-29
CU928166_331(CU928166|pid:none) Kluyveromyces thermotolerans str... 98 9e-29
BC063206_1(BC063206|pid:none) Xenopus tropicalis TBC1 domain fam... 125 1e-27
BC076966_1(BC076966|pid:none) Xenopus tropicalis TBC1 domain fam... 125 1e-27
AJ720021_1(AJ720021|pid:none) Gallus gallus mRNA for hypothetica... 124 2e-27
BC095269_1(BC095269|pid:none) Danio rerio zgc:110443, mRNA (cDNA... 122 2e-26
BC066727_1(BC066727|pid:none) Danio rerio zgc:110443, mRNA (cDNA... 119 8e-26
(P48365) RecName: Full=GTPase-activating protein GYP7; AltName: ... 119 1e-25
AB017067_4(AB017067|pid:none) Arabidopsis thaliana genomic DNA, ... 99 1e-25
(Q8BYH7) RecName: Full=TBC1 domain family member 17; &AK039566_... 116 9e-25
AK153732_1(AK153732|pid:none) Mus musculus 3 days neonate thymus... 116 9e-25
BC121502_1(BC121502|pid:none) Xenopus tropicalis TBC1 domain fam... 115 1e-24
AK300007_1(AK300007|pid:none) Homo sapiens cDNA FLJ55654 complet... 114 3e-24
(Q9HA65) RecName: Full=TBC1 domain family member 17; &AK022230_... 114 3e-24
BC151508_1(BC151508|pid:none) Bos taurus TBC1 domain family, mem... 114 3e-24
CU928175_441(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 114 4e-24
EF085333_1(EF085333|pid:none) Picea sitchensis clone WS02721_I04... 90 8e-24
EF678414_1(EF678414|pid:none) Picea sitchensis clone WS0291_L01 ... 90 8e-24
BC099146_1(BC099146|pid:none) Rattus norvegicus TBC1 domain fami... 112 2e-23
AC012329_5(AC012329|pid:none) Arabidopsis thaliana chromosome 1 ... 89 5e-23
AK229325_1(AK229325|pid:none) Arabidopsis thaliana mRNA for GTPa... 89 5e-23
EU973247_1(EU973247|pid:none) Zea mays clone 395452 unknown mRNA. 93 8e-23
AE014134_61(AE014134|pid:none) Drosophila melanogaster chromosom... 105 2e-21
AC159413_32(AC159413|pid:none) Trypanosoma brucei chromosome 7 c... 77 2e-21
(Q6FWI1) RecName: Full=GTPase-activating protein GYP7; AltName: ... 103 6e-21
AL604066_6(AL604066|pid:none) Mouse DNA sequence from clone RP23... 80 2e-20
AK122273_1(AK122273|pid:none) Mus musculus mRNA for mKIAA0397 pr... 80 2e-20
(Q80U12) RecName: Full=Small G protein signaling modulator 2; Al... 80 2e-20
AB275762_1(AB275762|pid:none) Homo sapiens SGSM2 mRNA for small ... 80 3e-20
AB007857_1(AB007857|pid:none) Homo sapiens mRNA for KIAA0397 pro... 79 4e-20
AE014298_3150(AE014298|pid:none) Drosophila melanogaster chromos... 76 2e-19
AK078145_1(AK078145|pid:none) Mus musculus adult male medulla ob... 66 2e-19
BC128565_1(BC128565|pid:none) Mus musculus TBC1 domain family, m... 66 2e-19
AB449912_1(AB449912|pid:none) Homo sapiens TBC1D25 mRNA for TBC1... 66 2e-19
AK040932_1(AK040932|pid:none) Mus musculus adult male aorta and ... 66 2e-19
BC161862_1(BC161862|pid:none) Rattus norvegicus TBC1 domain fami... 66 2e-19
AK294776_1(AK294776|pid:none) Homo sapiens cDNA FLJ54460 complet... 66 2e-19
AK293521_1(AK293521|pid:none) Homo sapiens cDNA FLJ59474 complet... 66 2e-19
AK297924_1(AK297924|pid:none) Homo sapiens cDNA FLJ53817 complet... 66 2e-19
BX469917_3(BX469917|pid:none) Zebrafish DNA sequence from clone ... 67 8e-19
AK053555_1(AK053555|pid:none) Mus musculus 0 day neonate eyeball... 76 2e-18
BC138049_1(BC138049|pid:none) Mus musculus small G protein signa... 76 2e-18
BX547941_2(BX547941|pid:none) Zebrafish DNA sequence from clone ... 75 2e-18
AY129013_1(AY129013|pid:none) Homo sapiens clone FP17814 unknown... 94 4e-18
AB075821_1(AB075821|pid:none) Homo sapiens mRNA for KIAA1941 pro... 75 4e-18
AB449879_1(AB449879|pid:none) Homo sapiens RUTBC2 mRNA for RUN a... 75 4e-18
AB275761_1(AB275761|pid:none) Homo sapiens SGSM1 mRNA for small ... 75 4e-18
BT035400_1(BT035400|pid:none) Zea mays full-length cDNA clone ZM... 94 6e-18
AM423639_1(AM423639|pid:none) Vitis vinifera contig VV78X038406.... 92 1e-17
AK221904_1(AK221904|pid:none) Arabidopsis thaliana mRNA for GTPa... 91 5e-17
AY039546_1(AY039546|pid:none) Arabidopsis thaliana AT5g53570/MNC... 91 5e-17
AB015476_10(AB015476|pid:none) Arabidopsis thaliana genomic DNA,... 91 5e-17
AK294955_1(AK294955|pid:none) Homo sapiens cDNA FLJ60111 complet... 67 1e-16
AB016884_9(AB016884|pid:none) Arabidopsis thaliana genomic DNA, ... 89 1e-16
AK230017_1(AK230017|pid:none) Arabidopsis thaliana mRNA for GTPa... 89 1e-16
BT036959_1(BT036959|pid:none) Zea mays full-length cDNA clone ZM... 89 2e-16
(Q8TBP0) RecName: Full=TBC1 domain family member 16; &AB449902_... 88 3e-16
FN376299_1(FN376299|pid:none) Schistosoma mansoni genome sequenc... 62 4e-16
EU957246_1(EU957246|pid:none) Zea mays clone 1586973 unknown mRNA. 85 2e-15
CT005261_51(CT005261|pid:none) Leishmania major strain Friedlin,... 60 3e-15
AK071602_1(AK071602|pid:none) Oryza sativa Japonica Group cDNA c... 82 1e-14
AM429097_1(AM429097|pid:none) Vitis vinifera contig VV78X126805.... 63 2e-14
AL138659_12(AL138659|pid:none) Arabidopsis thaliana DNA chromoso... 65 3e-14
AK046883_1(AK046883|pid:none) Mus musculus 10 days neonate medul... 80 7e-14
BC017607_1(BC017607|pid:none) Mus musculus TBC1 domain family, m... 80 7e-14
AK117388_1(AK117388|pid:none) Arabidopsis thaliana At3g59570 mRN... 62 1e-13
AC146555_23(AC146555|pid:none) Medicago truncatula clone mth2-10... 78 3e-13
EU957547_1(EU957547|pid:none) Zea mays clone 1597118 TBC domain ... 77 8e-13
BT038472_1(BT038472|pid:none) Zea mays full-length cDNA clone ZM... 77 8e-13
AE014296_1575(AE014296|pid:none) Drosophila melanogaster chromos... 66 2e-12
BC026050_1(BC026050|pid:none) Homo sapiens TBC1 domain family, m... 66 2e-12
AK226930_1(AK226930|pid:none) Arabidopsis thaliana mRNA for hypo... 75 2e-12
BT068086_1(BT068086|pid:none) Zea mays full-length cDNA clone ZM... 75 2e-12
AY142502_1(AY142502|pid:none) Arabidopsis thaliana unknown prote... 75 3e-12
AY058542_1(AY058542|pid:none) Drosophila melanogaster LD24460 fu... 65 3e-12
AM494959_48(AM494959|pid:none) Leishmania braziliensis chromosom... 49 4e-12
AP004573_9(AP004573|pid:none) Oryza sativa Japonica Group genomi... 74 5e-12
BC058414_1(BC058414|pid:none) Mus musculus small G protein signa... 51 5e-12
T19836(T19836)hypothetical protein C38H2.1 - Caenorhabditis eleg... 57 5e-12
FN392319_221(FN392319|pid:none) Pichia pastoris GS115 chromosome... 65 6e-11
Z68117_4(Z68117|pid:none) Caenorhabditis elegans Cosmid F45E6, c... 60 6e-11
AC007109_2(AC007109|pid:none) Arabidopsis thaliana chromosome 2 ... 70 7e-11
EF144388_1(EF144388|pid:none) Populus trichocarpa clone PX0019_D... 69 2e-10
(Q8IYX1) RecName: Full=TBC1 domain family member 21; &BC033516_... 67 5e-10
AB449907_1(AB449907|pid:none) Homo sapiens TBC1D21 mRNA for TBC1... 67 5e-10
AP008210_598(AP008210|pid:none) Oryza sativa (japonica cultivar-... 54 6e-10
AM429712_1(AM429712|pid:none) Vitis vinifera contig VV78X037252.... 67 8e-10
BC143010_1(BC143010|pid:none) Synthetic construct Homo sapiens c... 58 1e-09
CR860928_1(CR860928|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1... 59 1e-09
BC155093_1(BC155093|pid:none) Danio rerio zgc:171891, mRNA (cDNA... 59 1e-09
BC001292_1(BC001292|pid:none) Homo sapiens TBC1 domain family, m... 59 2e-09
AK055591_1(AK055591|pid:none) Homo sapiens cDNA FLJ31029 fis, cl... 59 2e-09
AK127653_1(AK127653|pid:none) Homo sapiens cDNA FLJ45751 fis, cl... 59 2e-09
AL023733_2(AL023733|pid:none) Human DNA sequence from clone SC22... 59 2e-09
AK154226_1(AK154226|pid:none) Mus musculus NOD-derived CD11c +ve... 59 2e-09
(Q8R5A6) RecName: Full=TBC1 domain family member 22A; &AK039627... 59 2e-09
AC146683_4(AC146683|pid:none) Medicago truncatula clone mth2-179... 52 2e-09
BC136509_1(BC136509|pid:none) Homo sapiens TBC1 domain family, m... 58 2e-09
AK295183_1(AK295183|pid:none) Homo sapiens cDNA FLJ54808 complet... 58 2e-09
BC023106_1(BC023106|pid:none) Mus musculus TBC1 domain family, m... 59 2e-09
AK123828_1(AK123828|pid:none) Homo sapiens cDNA FLJ41834 fis, cl... 58 2e-09
AL109820_17(AL109820|pid:none) S.pombe chromosome I cosmid c1952... 53 3e-09
(Q95KI1) RecName: Full=TBC1 domain family member 22A; Flags: Fra... 58 3e-09
AB060857_1(AB060857|pid:none) Macaca fascicularis brain cDNA clo... 58 3e-09
AC130798_4(AC130798|pid:none) Medicago truncatula clone mth2-27f... 51 3e-09
AK301445_1(AK301445|pid:none) Homo sapiens cDNA FLJ57214 complet... 58 3e-09
AL035528_12(AL035528|pid:none) Arabidopsis thaliana DNA chromoso... 52 4e-09
AK007086_1(AK007086|pid:none) Mus musculus adult male testis cDN... 63 9e-09
AF293463_2(AF293463|pid:none) Homo sapiens interleukin-4 induced... 62 2e-08
BC040590_1(BC040590|pid:none) Homo sapiens RUN and TBC1 domain c... 62 2e-08
BC078987_1(BC078987|pid:none) Rattus norvegicus TBC1 domain fami... 62 2e-08
AE014297_3040(AE014297|pid:none) Drosophila melanogaster chromos... 57 2e-08
AC004809_18(AC004809|pid:none) Arabidopsis thaliana chromosome 1... 44 2e-08
(Q9NU19) RecName: Full=TBC1 domain family member 22B; &AB449909... 57 4e-08
BC142187_1(BC142187|pid:none) Bos taurus TBC1 domain family, mem... 57 4e-08
(O59737) RecName: Full=GTPase-activating protein gyp1; AltName: ... 51 5e-08
BT054291_1(BT054291|pid:none) Zea mays full-length cDNA clone ZM... 47 7e-08
AL731623_9(AL731623|pid:none) Oryza sativa genomic DNA, chromoso... 47 1e-07
AB173992_1(AB173992|pid:none) Macaca fascicularis brain cDNA clo... 53 1e-07
AK072293_1(AK072293|pid:none) Oryza sativa Japonica Group cDNA c... 46 1e-07
AP008217_903(AP008217|pid:none) Oryza sativa (japonica cultivar-... 48 1e-07
FN357479_7(FN357479|pid:none) Schistosoma mansoni genome sequenc... 42 2e-07
CR855616_1(CR855616|pid:none) Xenopus tropicalis finished cDNA, ... 54 2e-07
AM920437_803(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 54 2e-07
AY577002_1(AY577002|pid:none) Danio rerio clone RZ150A4A11 C22or... 52 2e-07
CR954201_164(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 45 2e-07
AP007154_647(AP007154|pid:none) Aspergillus oryzae RIB40 genomic... 54 2e-07
AL844509_202(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 50 5e-07
CR382121_338(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 52 5e-07
BC060066_1(BC060066|pid:none) Mus musculus TBC1 domain family, m... 57 6e-07
CU928173_486(CU928173|pid:none) Zygosaccharomyces rouxii strain ... 51 7e-07
BC002720_1(BC002720|pid:none) Homo sapiens TBC1 domain family, m... 57 8e-07
(Q08484) RecName: Full=GTPase-activating protein GYP1; AltName: ... 52 1e-06
CR380958_448(CR380958|pid:none) Candida glabrata strain CBS138 c... 53 1e-06
AL451022_12(AL451022|pid:none) Neurospora crassa DNA linkage gro... 51 1e-06
AP007159_552(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 55 2e-06
BC125999_1(BC125999|pid:none) Xenopus laevis hypothetical protei... 50 2e-06
AM502248_321(AM502248|pid:none) Leishmania infantum chromosome 30. 49 3e-06
T21643(T21643) hypothetical protein F32B6.8 - Caenorhabditis ele... 50 3e-06
Z81074_9(Z81074|pid:none) Caenorhabditis elegans Cosmid F32B6, c... 50 3e-06
CP000581_173(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 45 3e-06
CR382138_142(CR382138|pid:none) Debaryomyces hansenii strain CBS... 41 7e-06
FM992689_976(FM992689|pid:none) Candida dubliniensis CD36 chromo... 44 7e-06
AK066076_1(AK066076|pid:none) Oryza sativa Japonica Group cDNA c... 45 7e-06
AM480287_3(AM480287|pid:none) Vitis vinifera contig VV78X115538.... 53 9e-06
EU975359_1(EU975359|pid:none) Zea mays clone 488613 TBC1 domain ... 46 2e-05
CU640366_1332(CU640366|pid:none) Podospora anserina genomic DNA ... 47 2e-05
CR382137_141(CR382137|pid:none) Debaryomyces hansenii strain CBS... 52 2e-05
CU928170_739(CU928170|pid:none) Kluyveromyces thermotolerans str... 48 3e-05
CP000501_192(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 41 3e-05
AC002340_10(AC002340|pid:none) Arabidopsis thaliana chromosome 2... 44 6e-05
G84711(G84711)hypothetical protein At2g30710 [imported] - Arabid... 44 6e-05
AC009259_7(AC009259|pid:none) Trypanosoma brucei chromosome 6 cl... 50 6e-05
CU633900_297(CU633900|pid:none) Podospora anserina genomic DNA c... 42 2e-04
BC072280_1(BC072280|pid:none) Xenopus laevis hypothetical protei... 49 2e-04
BT038102_1(BT038102|pid:none) Zea mays full-length cDNA clone ZM... 49 2e-04
BC056792_1(BC056792|pid:none) Danio rerio TBC1 domain family, me... 49 2e-04
BX927400_3(BX927400|pid:none) Zebrafish DNA sequence from clone ... 49 2e-04
AL035680_5(AL035680|pid:none) Arabidopsis thaliana DNA chromosom... 47 5e-04
CU928181_330(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 35 5e-04
AM494967_281(AM494967|pid:none) Leishmania braziliensis chromoso... 47 7e-04
(Q755I4) RecName: Full=GTPase-activating protein GYP5; &AE01681... 33 7e-04
AB168705_1(AB168705|pid:none) Macaca fascicularis testis cDNA cl... 47 9e-04
AC084047_21(AC084047|pid:none) Trypanosoma brucei chromosome 6 c... 40 0.001
D86965_1(D86965|pid:none) Homo sapiens mRNA for KIAA0210 gene, p... 46 0.001
(Q92609) RecName: Full=TBC1 domain family member 5; &AB383800_1... 46 0.001
AK220251_1(AK220251|pid:none) Mus musculus mRNA for mKIAA0210 pr... 46 0.001
AK154975_1(AK154975|pid:none) Mus musculus NOD-derived CD11c +ve... 46 0.001
(Q80XQ2) RecName: Full=TBC1 domain family member 5; &BC043113_1... 46 0.001
AK144467_1(AK144467|pid:none) Mus musculus 0 day neonate cortex ... 46 0.001
FN357446_26(FN357446|pid:none) Schistosoma mansoni genome sequen... 38 0.003
AM118080_127(AM118080|pid:none) Ustilago hordei mating type regi... 44 0.004
CU638743_621(CU638743|pid:none) Podospora anserina genomic DNA c... 36 0.006
AL356834_3(AL356834|pid:none) Neurospora crassa DNA linkage grou... 37 0.007
AM920437_715(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 39 0.009
AK027457_1(AK027457|pid:none) Homo sapiens cDNA FLJ14551 fis, cl... 43 0.009
AM270079_49(AM270079|pid:none) Aspergillus niger contig An04c018... 38 0.012
FN357585_5(FN357585|pid:none) Schistosoma mansoni genome sequenc... 43 0.012
CR954212_173(CR954212|pid:none) Ostreococcus tauri strain OTTH05... 43 0.012
AK033710_1(AK033710|pid:none) Mus musculus adult male cecum cDNA... 42 0.016
AE017351_212(AE017351|pid:none) Cryptococcus neoformans var. neo... 42 0.016
FN392319_1506(FN392319|pid:none) Pichia pastoris GS115 chromosom... 33 0.026
AP007155_1002(AP007155|pid:none) Aspergillus oryzae RIB40 genomi... 37 0.033
AK220347_1(AK220347|pid:none) Mus musculus mRNA for mKIAA0603 pr... 37 0.043
AK172575_1(AK172575|pid:none) Mus musculus activated spleen cDNA... 37 0.044
AB170431_1(AB170431|pid:none) Macaca fascicularis brain cDNA clo... 41 0.047
CP001142_382(CP001142|pid:none) Phaeodactylum tricornutum CCAP 1... 30 0.059
AK170021_1(AK170021|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.080
CR382139_175(CR382139|pid:none) Debaryomyces hansenii strain CBS... 33 0.097
AY136478_1(AY136478|pid:none) Arabidopsis thaliana plant adhesio... 30 0.098
(Q6NRC7) RecName: Full=TBC1 domain family member 23; &BC070830_... 40 0.10
BC073710_1(BC073710|pid:none) Xenopus laevis MGC83651 protein, m... 36 0.15
CU633438_326(CU633438|pid:none) Podospora anserina genomic DNA c... 39 0.18
BT031268_1(BT031268|pid:none) Drosophila melanogaster LD42868 fu... 39 0.18
AK066731_1(AK066731|pid:none) Oryza sativa Japonica Group cDNA c... 39 0.18
AE014298_714(AE014298|pid:none) Drosophila melanogaster chromoso... 39 0.18
CR382128_461(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 30 0.20
AF126057_1(AF126057|pid:none) Arabidopsis thaliana microtubule-a... 39 0.23
FM992689_257(FM992689|pid:none) Candida dubliniensis CD36 chromo... 32 0.27
(P36618) RecName: Full=Cell division control protein 16; &CU329... 36 0.27
(O60343) RecName: Full=TBC1 domain family member 4; AltName: Ful... 34 0.32
FM207107_1(FM207107|pid:none) Homo sapiens mRNA for TBC1 domain ... 34 0.32
FM207106_1(FM207106|pid:none) Homo sapiens mRNA for TBC1 domain ... 34 0.32
CR858503_1(CR858503|pid:none) Pongo abelii mRNA; cDNA DKFZp469M0... 34 0.33
AK300468_1(AK300468|pid:none) Homo sapiens cDNA FLJ50736 complet... 34 0.34
AK304091_1(AK304091|pid:none) Homo sapiens cDNA FLJ50361 complet... 34 0.34
AC003058_4(AC003058|pid:none) Arabidopsis thaliana chromosome 2 ... 38 0.40
AK228688_1(AK228688|pid:none) Arabidopsis thaliana mRNA for puta... 29 0.45
CP000496_215(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 32 0.45
AC021640_9(AC021640|pid:none) Arabidopsis thaliana chromosome II... 29 0.45
BT038351_1(BT038351|pid:none) Zea mays full-length cDNA clone ZM... 30 0.74
EF146951_1(EF146951|pid:none) Populus trichocarpa clone WS01225_... 30 0.75
BT084174_1(BT084174|pid:none) Zea mays full-length cDNA clone ZM... 30 0.75
AM910994_321(AM910994|pid:none) Plasmodium knowlesi strain H chr... 37 0.88
BC000291_1(BC000291|pid:none) Homo sapiens TBC1 domain family, m... 37 0.88
BX323883_2(BX323883|pid:none) Zebrafish DNA sequence from clone ... 33 0.89
BC014529_1(BC014529|pid:none) Homo sapiens TBC1 (tre-2/USP6, BUB... 32 0.91
BC053648_1(BC053648|pid:none) Homo sapiens TBC1 (tre-2/USP6, BUB... 32 0.91
AB029031_1(AB029031|pid:none) Homo sapiens mRNA for KIAA1108 pro... 32 0.91
AK027355_1(AK027355|pid:none) Homo sapiens cDNA FLJ14449 fis, cl... 32 0.92
AY893161_1(AY893161|pid:none) Synthetic construct Homo sapiens c... 32 0.92
BC126979_1(BC126979|pid:none) Homo sapiens TBC1 (tre-2/USP6, BUB... 32 0.95
FN392319_59(FN392319|pid:none) Pichia pastoris GS115 chromosome ... 32 0.97
AB019233_2(AB019233|pid:none) Arabidopsis thaliana genomic DNA, ... 36 1.2
AE014187_697(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 36 1.2
AE014297_332(AE014297|pid:none) Drosophila melanogaster chromoso... 35 1.2
(Q60949) RecName: Full=TBC1 domain family member 1; 31 1.5
T29104(T29104) Tbc1 protein - mouse &U33005_1(U33005|pid:none) 31 1.5
(Q28CB1) RecName: Full=TBC1 domain family member 2B; &BC121891_... 36 1.5
AB463304_1(AB463304|pid:none) Synthetic construct DNA, clone: pF... 36 1.5
AB028978_1(AB028978|pid:none) Homo sapiens mRNA for KIAA1055 pro... 36 1.5
BC033712_1(BC033712|pid:none) Homo sapiens TBC1 domain family, m... 36 1.5
(Q9UPU7) RecName: Full=TBC1 domain family member 2B; 36 1.5
BC144482_1(BC144482|pid:none) Homo sapiens TBC1 domain family, m... 36 1.5
BC140766_1(BC140766|pid:none) Homo sapiens TBC1 domain family, m... 36 1.5
AK164923_1(AK164923|pid:none) Mus musculus 0 day neonate lung cD... 31 1.5
CR749622_1(CR749622|pid:none) Homo sapiens mRNA; cDNA DKFZp779C0... 32 1.5
AK168763_1(AK168763|pid:none) Mus musculus 16 days embryo kidney... 31 1.6
AM270178_4(AM270178|pid:none) Aspergillus niger contig An08c0230... 27 1.9
BC108420_1(BC108420|pid:none) Mus musculus TBC1 domain family, m... 35 2.0
CR382131_405(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 35 2.0
BC056467_1(BC056467|pid:none) Mus musculus TBC1 domain family, m... 35 2.0
AE013599_1902(AE013599|pid:none) Drosophila melanogaster chromos... 28 2.0
AE013599_1904(AE013599|pid:none) Drosophila melanogaster chromos... 28 2.0
AL110485_2(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A,... 31 2.5
AL110485_3(AL110485|pid:none) Caenorhabditis elegans YAC Y46G5A,... 31 2.5
AL138659_11(AL138659|pid:none) Arabidopsis thaliana DNA chromoso... 35 2.6
EF148761_1(EF148761|pid:none) Populus trichocarpa x Populus delt... 35 2.6
(Q5F361) RecName: Full=TBC domain-containing protein kinase-like... 35 2.6
CU928169_222(CU928169|pid:none) Kluyveromyces thermotolerans str... 35 2.6
(O97790) RecName: Full=TBC1 domain family member 1; AltName: Ful... 30 2.6
AM502245_169(AM502245|pid:none) Leishmania infantum chromosome 27. 35 3.4
AC013483_23(AC013483|pid:none) Arabidopsis thaliana chromosome I... 34 4.4
AM494964_217(AM494964|pid:none) Leishmania braziliensis chromoso... 34 4.4
AK228869_1(AK228869|pid:none) Arabidopsis thaliana mRNA for puta... 34 4.4
AK066945_1(AK066945|pid:none) Oryza sativa Japonica Group cDNA c... 34 4.4
AK005461_1(AK005461|pid:none) Mus musculus adult female placenta... 34 4.4
G88391(G88391)protein R06B10.5 [imported] - Caenorhabditis elegans 34 4.4
BC110738_1(BC110738|pid:none) Xenopus laevis hypothetical protei... 28 5.3
AM494972_640(AM494972|pid:none) Leishmania braziliensis chromoso... 34 5.7
BC096904_1(BC096904|pid:none) Danio rerio similar to CG4041-PA, ... 34 5.7
(Q8TEA7) RecName: Full=TBC domain-containing protein kinase-like... 34 5.7
BC068496_1(BC068496|pid:none) Homo sapiens TBC domain-containing... 34 5.7
DQ893279_1(DQ893279|pid:none) Synthetic construct clone IMAGE:10... 34 5.7
AM445895_1(AM445895|pid:none) Vitis vinifera contig VV78X059096.... 34 5.7
BX537118_1(BX537118|pid:none) Zebrafish DNA sequence from clone ... 34 5.7
AK041928_1(AK041928|pid:none) Mus musculus 3 days neonate thymus... 34 5.7
(Q8BM85) RecName: Full=TBC domain-containing protein kinase-like... 34 5.7
AM502254_659(AM502254|pid:none) Leishmania infantum chromosome 36. 27 7.1
BC084964_1(BC084964|pid:none) Xenopus laevis hypothetical LOC495... 33 7.5
AC116977_44(AC116977|pid:none) Dictyostelium discoideum chromoso... 33 7.5
FN357394_1(FN357394|pid:none) Schistosoma mansoni genome sequenc... 33 7.5
(P53258) RecName: Full=GTPase-activating protein GYP2; AltName: ... 33 9.8
EU839994_86(EU839994|pid:none) Agrotis ipsilon multiple nucleopo... 33 9.8
>BT064954_1(BT064954|pid:none) Zea mays full-length cDNA clone
ZM_BFc0058O08 mRNA, complete cds.
Length = 671
Score = 141 bits (356), Expect(2) = 8e-47
Identities = 64/141 (45%), Positives = 100/141 (70%)
Frame = +2
Query: 188 EVECFWCFKGLMDRLESNFHKDXNGMHHQLSTLSKLLKFIDLELYTHLEANNGGNMYFFF 367
E E FWCF LM+RL +NF++D NGMH QL LSKL++ +D L+ + N+ N +F F
Sbjct: 495 ESESFWCFASLMERLGANFNRDQNGMHAQLLALSKLVELLDPSLHNYFRQNDCLNYFFCF 554
Query: 368 QSVLICFKREFPFHDVLTLWEILWSNYMTKNLPIFMCLSILIKERNQILDENMAFDQILK 547
+ VLI FKREF F ++ LWE+LWS+Y++++ +++C++IL K R +I+ E M FD +LK
Sbjct: 555 RWVLIQFKREFSFDQIMLLWEVLWSHYLSEHFHLYLCVAILKKYRQRIIGEQMDFDTLLK 614
Query: 548 LINEKANRMDLEDILVDAESM 610
INE + +++L+ + DAE++
Sbjct: 615 FINELSGQINLDRAIQDAEAL 635
Score = 69.3 bits (168), Expect(2) = 8e-47
Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 7/67 (10%)
Frame = +1
Query: 1 VIRTDRLHPMFIQGEDDIDSNENLRLMRDVLLTYSFFNFDIGYVQGMSDLLSPIISVM-- 174
V+RTDR P + +G+D N+N+ ++RD+LLTYSF+NFD+GY QGMSD L+PI+ VM
Sbjct: 440 VVRTDRSIPYY-EGDD----NQNVVVLRDILLTYSFYNFDLGYCQGMSDFLAPILYVMED 494
Query: 175 -----WC 180
WC
Sbjct: 495 ESESFWC 501
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,168,823,743
Number of extensions: 23409577
Number of successful extensions: 49176
Number of sequences better than 10.0: 299
Number of HSP's gapped: 49084
Number of HSP's successfully gapped: 528
Length of query: 250
Length of database: 1,061,185,681
Length adjustment: 125
Effective length of query: 125
Effective length of database: 652,629,681
Effective search space: 81578710125
Effective search space used: 81578710125
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |