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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U05046-1
Contig ID Contig-U05046-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Contig-U05046-1Q.Seq.d
AAATTGGAAAATAAAAAAAAAAAAATTATTTATTTATATAAAAAATAAAA
AATAAAAAATAAAAAAAATGTTTAATTTTGTTTTTTCATATTTTAAAAAT
GATCCAATTAAGGAAAATAATGAAGATAATGAAGATAATGAAAGTGATAG
TTATGAAAGTGACTATGAAGACAATGAAGTTACCGATGATAATAAAAATA
AAAATTTACAACAACAACAAAATAAAATATTTCCAAATTATTTAATAATT
TCAATTTTAAATATGATATTAAATTCTGAATATAAAGATGGTATTAAAAT
TAAACATTTTCCAACAAAGAAAATAAATATTTTTCAAAATATATTAAAGA
TGACATTAGTTTCAAAGAATTTTGAAACAAATATTATACCACATTTGAAT
TATCCAATTTTTATAATAAAGAATTCAAAAGATATGCTTTATATTCAAAA
ACTAGTTAAAAATGGTATTACTCCAAATTGTAAAAATCCATTTGTAAATA
TTAATCAATTAAATATTAATTTACCAAATGAATATAAATTGACTGAAACG
AATCCAACCAATTCAATATTATTATTATTTAAAGAGAATTTTAAACTTGA
GANACTTAAAATCTCAACAGCATTAGGTACCAAATGATATGGATTGTGAA
GTTCCTTCGATTTTAGTTGAATTTATAATTAAACATCAAATTAAAGAATT
GGAATTACATAATTTACCAGCAATTAAAAACCCAAATTTTACAGAGAATA
AACCAATTTTAAATTATTCATTTCTTTCAAACAGAATTGAGCTATGTAAT
ATTCAACATTTATGCTTAAAGAATCAATTGTTGTCATGTGATAGAGTGAT
GGATTTTTTAGAACTAATTCCAAGATTATCAAGTTTAGATTTAACAAATA
ATAGAATTGGTTTAGATTATAGAGAGTGCTTTACAAATGCAATTGGAAAG
GCAAATCAATTATCAAGTTTAAAGCTATCTTCAAATATTTTAAAAGATAA
TATATTACAATTATTACCAATTTTAAAATCAAATTGTTATCAATTAACTA
CATTAGATCTTAGTGAAAATTATATAACTGATGAATCAAGTAAATCAATT
GAAGAATTTATTCAATTTAATAAAACAATTGAATCTTTAAAT
Gap no gap
Contig length 1142
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 296327
End point 297478
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U05046
List of clone(s) 

est1=SSE681E,1,1143
Translated Amino Acid sequence 
nwkikkkklfiyiknkk*KIKKMFNFVFSYFKNDPIKENNEDNEDNESDSYESDYEDNEV
TDDNKNKNLQQQQNKIFPNYLIISILNMILNSEYKDGIKIKHFPTKKINIFQNILKMTLV
SKNFETNIIPHLNYPIFIIKNSKDMLYIQKLVKNGITPNCKNPFVNINQLNINLPNEYKL
TETNPTNSILLLFKENFKLEXLKISTALGTK*ygl*ssfdfs*iyn*tsn*rigit*fts
n*kpkfyre*tnfklfisfkqn*am*ystfmlkesivvm**sdgffrtnskiikfrfnk*
*nwfrl*rvlykcnwkgksiikfkaifkyfkr*yitiitnfkikllsinyirs**klyn*
*ik*in*riysi**nn*ifk
Translated Amino Acid sequence (All Frames) 
Frame A:
klenkkkkiiylykk*kiknkknv*fcffif*k*sn*gk**r**r**k**l*k*l*rq*s
yr***k*kfttttk*nisklfnnfnfkydikf*i*rwy*n*tfsnkenkyfskyikddis
fkef*nkyyttfelsnfynkefkryalyskts*kwyyskl*ksicky*siky*ftk*i*i
d*nesnqfniiii*ref*t*xt*nlnsiryqmiwivkflrf*lnl*lniklknwnyiiyq
qlktqilqrinqf*iihffqtelsyvifniya*rincchvie*wif*n*fqdyqv*i*qi
ielv*iiesalqmqlerqinyqv*sylqif*kiiyynyyqf*nqivin*lh*ilvkii*l
mnqvnqlknlfnlikqlnl*


Frame B:
nwkikkkklfiyiknkk*KIKKMFNFVFSYFKNDPIKENNEDNEDNESDSYESDYEDNEV
TDDNKNKNLQQQQNKIFPNYLIISILNMILNSEYKDGIKIKHFPTKKINIFQNILKMTLV
SKNFETNIIPHLNYPIFIIKNSKDMLYIQKLVKNGITPNCKNPFVNINQLNINLPNEYKL
TETNPTNSILLLFKENFKLEXLKISTALGTK*ygl*ssfdfs*iyn*tsn*rigit*fts
n*kpkfyre*tnfklfisfkqn*am*ystfmlkesivvm**sdgffrtnskiikfrfnk*
*nwfrl*rvlykcnwkgksiikfkaifkyfkr*yitiitnfkikllsinyirs**klyn*
*ik*in*riysi**nn*ifk


Frame C:
igk*kkknylfi*kiknkk*kkclilffhilkmiqlrkimkimkimkvivmkvtmktmkl
pmiikikiynnnkikyfqii**fqf*i*y*ilnikmvlklnifqqrk*iffkiy*r*h*f
qrilkqilyhi*iiqfl**riqkicfifkn*lkmvllqivkihl*ilin*iliyqmnin*
lkriqpiqyyyylkrilnlrxlksqqh*vpndmdcevpsilvefiikhqikelelhnlpa
iknpnftenkpilnysflsnrielcniqhlclknqllscdrvmdfleliprlssldltnn
rigldyrecftnaigkanqlsslklssnilkdnilqllpilksncyqlttldlsenyitd
essksieefiqfnktiesln
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U05046-1 (Contig-U05046-1Q)
/CSM_Contig/Contig-U05046-1Q.Seq.d
         (1142 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Conti...  1752  0.0
Contig-U11309-1 (Contig-U11309-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U09412-1 (Contig-U09412-1Q) /CSM_Contig/Conti...    46  8e-05
Contig-U03750-1 (Contig-U03750-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U13527-1 (Contig-U13527-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U12523-1 (Contig-U12523-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11691-1 (Contig-U11691-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U09810-1 (Contig-U09810-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U04603-1 (Contig-U04603-1Q) /CSM_Contig/Conti...    40  0.005

>Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Contig-U05046-1Q.Seq.d
          Length = 1142

 Score = 1752 bits (884), Expect = 0.0
 Identities = 887/887 (100%)
 Strand = Plus / Plus

                                                                        
Query: 256  tttaaatatgatattaaattctgaatataaagatggtattaaaattaaacattttccaac 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256  tttaaatatgatattaaattctgaatataaagatggtattaaaattaaacattttccaac 315

                                                                        
Query: 316  aaagaaaataaatatttttcaaaatatattaaagatgacattagtttcaaagaattttga 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316  aaagaaaataaatatttttcaaaatatattaaagatgacattagtttcaaagaattttga 375

                                                                        
Query: 376  aacaaatattataccacatttgaattatccaatttttataataaagaattcaaaagatat 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376  aacaaatattataccacatttgaattatccaatttttataataaagaattcaaaagatat 435

                                                                        
Query: 436  gctttatattcaaaaactagttaaaaatggtattactccaaattgtaaaaatccatttgt 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436  gctttatattcaaaaactagttaaaaatggtattactccaaattgtaaaaatccatttgt 495

                                                                        
Query: 496  aaatattaatcaattaaatattaatttaccaaatgaatataaattgactgaaacgaatcc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496  aaatattaatcaattaaatattaatttaccaaatgaatataaattgactgaaacgaatcc 555

                                                                        
Query: 556  aaccaattcaatattattattatttaaagagaattttaaacttgaganacttaaaatctc 615
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556  aaccaattcaatattattattatttaaagagaattttaaacttgaganacttaaaatctc 615

                                                                        
Query: 616  aacagcattaggtaccaaatgatatggattgtgaagttccttcgattttagttgaattta 675
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616  aacagcattaggtaccaaatgatatggattgtgaagttccttcgattttagttgaattta 675

                                                                        
Query: 676  taattaaacatcaaattaaagaattggaattacataatttaccagcaattaaaaacccaa 735
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676  taattaaacatcaaattaaagaattggaattacataatttaccagcaattaaaaacccaa 735

                                                                        
Query: 736  attttacagagaataaaccaattttaaattattcatttctttcaaacagaattgagctat 795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736  attttacagagaataaaccaattttaaattattcatttctttcaaacagaattgagctat 795

                                                                        
Query: 796  gtaatattcaacatttatgcttaaagaatcaattgttgtcatgtgatagagtgatggatt 855
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  gtaatattcaacatttatgcttaaagaatcaattgttgtcatgtgatagagtgatggatt 855

                                                                        
Query: 856  ttttagaactaattccaagattatcaagtttagatttaacaaataatagaattggtttag 915
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856  ttttagaactaattccaagattatcaagtttagatttaacaaataatagaattggtttag 915

                                                                        
Query: 916  attatagagagtgctttacaaatgcaattggaaaggcaaatcaattatcaagtttaaagc 975
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  attatagagagtgctttacaaatgcaattggaaaggcaaatcaattatcaagtttaaagc 975

                                                                        
Query: 976  tatcttcaaatattttaaaagataatatattacaattattaccaattttaaaatcaaatt 1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 976  tatcttcaaatattttaaaagataatatattacaattattaccaattttaaaatcaaatt 1035

                                                                        
Query: 1036 gttatcaattaactacattagatcttagtgaaaattatataactgatgaatcaagtaaat 1095
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 gttatcaattaactacattagatcttagtgaaaattatataactgatgaatcaagtaaat 1095

                                                           
Query: 1096 caattgaagaatttattcaatttaataaaacaattgaatctttaaat 1142
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 caattgaagaatttattcaatttaataaaacaattgaatctttaaat 1142


 Score =  246 bits (124), Expect = 4e-65
 Identities = 124/124 (100%)
 Strand = Plus / Plus

                                                                       
Query: 69  tgtttaattttgttttttcatattttaaaaatgatccaattaaggaaaataatgaagata 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  tgtttaattttgttttttcatattttaaaaatgatccaattaaggaaaataatgaagata 128

                                                                       
Query: 129 atgaagataatgaaagtgatagttatgaaagtgactatgaagacaatgaagttaccgatg 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgaagataatgaaagtgatagttatgaaagtgactatgaagacaatgaagttaccgatg 188

               
Query: 189 ataa 192
           ||||
Sbjct: 189 ataa 192


 Score = 30.2 bits (15), Expect = 5.0
 Identities = 15/15 (100%)
 Strand = Plus / Minus

                          
Query: 296 aaaattaaacatttt 310
           |||||||||||||||
Sbjct: 79  aaaattaaacatttt 65


>Contig-U11309-1 (Contig-U11309-1Q) /CSM_Contig/Contig-U11309-1Q.Seq.d
          Length = 1402

 Score = 48.1 bits (24), Expect = 2e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 116 aataatgaagataatgaagataat 139
           ||||||||||||||||||||||||
Sbjct: 219 aataatgaagataatgaagataat 242


 Score = 34.2 bits (17), Expect = 0.32
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 126 ataatgaagataatgaa 142
           |||||||||||||||||
Sbjct: 220 ataatgaagataatgaa 236


 Score = 30.2 bits (15), Expect = 5.0
 Identities = 24/27 (88%)
 Strand = Plus / Plus

                                      
Query: 117 ataatgaagataatgaagataatgaaa 143
           |||||||||||||| | || |||||||
Sbjct: 229 ataatgaagataataatgaaaatgaaa 255


>Contig-U09412-1 (Contig-U09412-1Q) /CSM_Contig/Contig-U09412-1Q.Seq.d
          Length = 883

 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 113 gaaaataatgaagataatgaagataatgaaa 143
           |||||||||||| |||||||| |||||||||
Sbjct: 463 gaaaataatgaaaataatgaaaataatgaaa 493


 Score = 46.1 bits (23), Expect = 8e-05
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 113 gaaaataatgaagataatgaagataatgaaa 143
           |||||||||||| |||||||| |||||||||
Sbjct: 454 gaaaataatgaaaataatgaaaataatgaaa 484


 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 113 gaaaataatgaagataatgaagataatgaa 142
           |||||||||||| |||||||| ||||||||
Sbjct: 472 gaaaataatgaaaataatgaaaataatgaa 501


 Score = 40.1 bits (20), Expect = 0.005
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 113 gaaaataatgaagataatgaagat 136
           |||||||||||| |||||||||||
Sbjct: 481 gaaaataatgaaaataatgaagat 504


 Score = 34.2 bits (17), Expect = 0.32
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 747 aataaaccaattttaaa 763
           |||||||||||||||||
Sbjct: 20  aataaaccaattttaaa 36


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 42,762
Number of Sequences: 6905
Number of extensions: 42762
Number of successful extensions: 12003
Number of sequences better than 10.0: 910
length of query: 1142
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1126
effective length of database: 5,564,391
effective search space: 6265504266
effective search space used: 6265504266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 7. 9
Homology vs DNA 
Query= Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Contig-U05046-1Q.Seq.d
         (1142 letters)

Database: ddbj_B
           105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C92555) Dictyostelium discoideum slug cDNA, clone SSE681.       1023   0.0    2
(AU072486) Dictyostelium discoideum slug cDNA, clone SSE681.      238   4e-58  1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    38   2e-08  13
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    40   1e-07  19
(AL844507) Plasmodium falciparum 3D7 chromosome 8.                 46   7e-07  15
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         36   9e-07  18
(AX392736) Sequence 26 from Patent WO0212526.                      36   1e-06  9
(AR707083) Sequence 26 from patent US 6933145.                     36   1e-06  9
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete...    46   1e-06  12
(AE017308) Mycoplasma mobile 163K complete genome.                 42   5e-06  18
(AL844509) Plasmodium falciparum 3D7 chromosome 13.                40   7e-06  15
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome.    36   7e-06  21
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co...    34   9e-06  12
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105...    38   1e-05  10
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    46   2e-05  11
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI...    40   2e-05  14
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont...    38   3e-05  13
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    34   3e-05  11
(AL844508) Plasmodium falciparum 3D7 chromosome 9.                 36   3e-05  16
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   4e-05  11
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete...    50   5e-05  11
(AL844504) Plasmodium falciparum 3D7 chromosome 5.                 38   6e-05  16
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    44   6e-05  14
(AL844505) Plasmodium falciparum 3D7 chromosome 6.                 52   6e-05  10
(CP000743) Methanococcus aeolicus Nankai-3, complete genome.       36   6e-05  18
(AL844506) Plasmodium falciparum 3D7 chromosome 7.                 38   9e-05  13
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    36   9e-05  18
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    46   9e-05  17
(CP000361) Arcobacter butzleri RM4018, complete genome.            42   1e-04  20
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    48   1e-04  9
(AE017245) Mycoplasma synoviae 53, complete genome.                36   2e-04  20
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    38   2e-04  18
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    32   3e-04  12
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ...    36   3e-04  18
(AM180355) Clostridium difficile 630 complete genome.              40   4e-04  23
(FB571382) Sequence 249 from Patent EP1865317.                     30   5e-04  15
(FB571326) Sequence 193 from Patent EP1865317.                     30   5e-04  15
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    42   7e-04  17
(AF298624) Dictyostelium discoideum chromosome 2 repeat region.    46   7e-04  6
(AC181532) Strongylocentrotus purpuratus clone R3-1109P7, WO...    38   8e-04  10
(AE016826) Buchnera aphidicola str. Bp (Baizongia pistaciae)...    36   0.001  17
(AE001362) Plasmodium falciparum 3D7 chromosome 2, complete ...    38   0.001  15
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    36   0.001  21
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    38   0.001  12
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    36   0.001  21
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    32   0.001  15
(AF538053) Monosiga brevicollis mitochondrion, complete genome.    36   0.001  11
(AL844503) Plasmodium falciparum 3D7 chromosome 4.                 56   0.001  15
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   0.002  17
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135...    34   0.002  9
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    34   0.002  10
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    40   0.003  18
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    38   0.003  18
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    34   0.003  12
(AL844502) Plasmodium falciparum 3D7 chromosome 3.                 56   0.003  1
(AA550399) 1547m3 gmbPfHB3.1, G. Roman Reddy Plasmodium falc...    56   0.003  1
(EG959995) AU_Ich_011A_H12 Whole organism normalized cDNA li...    56   0.003  1
(CP000576) Prochlorococcus marinus str. MIT 9301, complete g...    36   0.003  21
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome.    38   0.004  21
(CU915329) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   0.006  9
(AC004710) Plasmodium falciparum chromosome 12, *** SEQUENCI...    32   0.006  13
(CP000551) Prochlorococcus marinus str. AS9601, complete gen...    34   0.007  20
(AC235696) Glycine max strain Williams 82 clone GM_WBb0070F1...    38   0.007  10
(AX392733) Sequence 23 from Patent WO0212526.                      34   0.008  12
(AR707080) Sequence 23 from patent US 6933145.                     34   0.008  12
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    34   0.009  13
(AJ010592) Guillardia theta DNA for complete sequence of nuc...    34   0.009  14
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    38   0.010  6
(AM473613) Vitis vinifera contig VV78X028974.3, whole genome...    40   0.010  3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    34   0.010  10
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    36   0.011  8
(AC216601) Populus trichocarpa clone POP091-G07, complete se...    38   0.012  7
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com...    38   0.012  23
(EK520525) 1095515518052 Global-Ocean-Sampling_GS-32-01-01-1...    54   0.013  1
(ES513248) BIG_AF_21066 Brine Shrimp embryos, 10 hours after...    54   0.013  1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    40   0.013  10
(CR940347) Theileria annulata genomic DNA chromosome 1 part 1.     36   0.017  20
(EJ006934) 1091139283042 Global-Ocean-Sampling_GS-26-01-01-1...    42   0.018  2
(AL109814) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    34   0.018  11
(CU651599) M.truncatula DNA sequence from clone MTH2-116D19 ...    34   0.018  10
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8...    34   0.019  15
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    38   0.020  20
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    40   0.021  9
(AC004157) Plasmodium falciparum chromosome 12 clone PFYAC29...    46   0.022  10
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693...    36   0.025  8
(FB571381) Sequence 248 from Patent EP1865317.                     34   0.025  12
(FB571325) Sequence 192 from Patent EP1865317.                     34   0.025  12
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g...    36   0.025  20
(AE014186) Plasmodium falciparum 3D7 chromosome 11, complete...    52   0.026  13
(CT025909) Zebrafish DNA sequence from clone DKEY-254E7 in l...    32   0.026  11
(CP000033) Lactobacillus acidophilus NCFM, complete genome.        32   0.027  22
(AC079859) Homo sapiens chromosome 4 clone RP11-651A8, WORKI...    36   0.029  10
(AC183495) Brassica oleracea Contig A, complete sequence.          34   0.031  12
(CN194638) rg97e07.y1 Meloidogyne hapla female SMART pGEM Me...    40   0.031  2
(BX001036) Zebrafish DNA sequence from clone CH211-155G22 in...    36   0.031  10
(CP000312) Clostridium perfringens SM101, complete genome.         36   0.032  18
(CP001581) Clostridium botulinum A2 str. Kyoto, complete gen...    38   0.032  17
(BX548174) Prochlorococcus marinus MED4 complete genome.           36   0.034  22
(FB571361) Sequence 228 from Patent EP1865317.                     34   0.034  8
(EF568108) Glossina pallidipes salivary gland hypertrophy vi...    34   0.035  12
(CT027663) Medicago truncatula chromosome 5 clone mth2-139g2...    36   0.036  7
(EL493596) B07_PFBAMHI-L-T3-PLATE3A.AB1 Blood stage Plasmodi...    46   0.036  2
(DW273881) UI-S-GS1-acu-c-09-0-UI.s1 UI-S-GS1 Euprymna scolo...    38   0.041  2
(CP000382) Clostridium novyi NT, complete genome.                  34   0.043  19
(AY863213) Smittium culisetae mitochondrion, complete genome.      34   0.044  8
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         34   0.045  17
(AY863212) Rhizopus oryzae mitochondrion, complete genome.         34   0.045  7
(EK167438) 1095458059343 Global-Ocean-Sampling_GS-31-01-01-1...    46   0.046  2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    34   0.046  12
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35...    50   0.046  13
(AC152347) Medicago truncatula chromosome 8 clone mth2-28c12...    38   0.047  9
(DD010735) Diagnosis of known genetic Parameters within the ...    38   0.048  14
(AB282662) Entamoeba nuttalli srp gene for serine-rich prote...    52   0.050  1
(DX112362) OG_ABa0136B22.r OG_ABa Oryza granulata genomic cl...    52   0.050  1
(CW504936) OP__Ba0007O12.r OP__Ba Oryza punctata genomic clo...    52   0.050  1
(EE674285) EST1399 Mycelia Grown in Nitrogen Limited Media C...    52   0.050  1
(AM053904) Eudiplodinium maggii EST, clone Em03_C04.               52   0.050  1
(CP000993) Borrelia recurrentis A1, complete genome.               34   0.050  19
(AC235371) Glycine max strain Williams 82 clone GM_WBb0104B0...    32   0.052  10
(AE015927) Clostridium tetani E88, complete genome.                32   0.052  19
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    34   0.054  8
(AC080183) Homo sapiens chromosome , clone RP11-1O24, comple...    42   0.055  9
(FJ478176) Venturia canescens mitochondrion, partial genome.       32   0.056  7
(AC111126) Mus musculus chromosome 5, clone RP23-336F4, comp...    40   0.057  7
(DT777614) 127430505 TH1 Tribolium castaneum cDNA clone 126O...    42   0.060  2
(AC215347) Pan troglodytes BAC clone CH251-683O6 from chromo...    34   0.063  11
(AC212312) Solanum lycopersicum cv. Heinz 1706, chromosome 5...    40   0.065  8
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-...    32   0.070  9
(CU076092) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    38   0.070  7
(AM438948) Vitis vinifera contig VV78X214314.23, whole genom...    36   0.075  7
(BX000349) Zebrafish DNA sequence from clone DKEY-63L3 in li...    36   0.076  10
(AX344560) Sequence 11 from Patent WO0200932.                      36   0.076  13
(AX344559) Sequence 10 from Patent WO0200932.                      36   0.076  13
(CU792428) A BAC library has been constructed from PN40024 g...    36   0.076  3
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    34   0.082  10
(AF466146) Melipona bicolor mitochondrial genome, partial se...    34   0.085  6
(AL445565) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    38   0.085  13
(AF274444) Carsonella ruddii ribosomal protein L11 (rpL11), ...    38   0.085  6
(BX547933) Zebrafish DNA sequence from clone DKEY-87L9 in li...    32   0.087  10
(CS468878) Sequence 69 from Patent EP1748080.                      34   0.088  12
(CS468877) Sequence 68 from Patent EP1748080.                      34   0.088  12
(CS419355) Sequence 69 from Patent WO2006094836.                   34   0.088  12
(CS419354) Sequence 68 from Patent WO2006094836.                   34   0.088  12
(AC233577) Medicago truncatula chromosome 1, pooled multiple...    38   0.093  8
(CU695012) Zebrafish DNA sequence from clone CH73-373M9.           40   0.097  6
(AC083965) Homo sapiens chromosome 4 clone RP11-89E4 map 4, ...    40   0.097  8
(AC231671) Solanum tuberosum chromosome 11 clone RH179O17, *...    40   0.098  8
(AC114258) Dictyostelium discoideum chromosome 2 map complem...    36   0.10   7
(DQ866050) Simosyrphus grandicornis mitochondrion, complete ...    36   0.10   5
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    38   0.10   22
(FJ406612) Plasmodium falciparum isolate Palo Alto merozoite...    46   0.10   2
(FJ406621) Plasmodium falciparum isolate 7G8 merozoite surfa...    46   0.10   2
(FJ406618) Plasmodium falciparum isolate Dd2 merozoite surfa...    46   0.10   2
(FJ406617) Plasmodium falciparum isolate FCC2 merozoite surf...    46   0.10   2
(FJ406616) Plasmodium falciparum isolate FCR3 merozoite surf...    46   0.10   2
(FJ406610) Plasmodium falciparum isolate T9/94 merozoite sur...    46   0.10   2
(FJ406607) Plasmodium falciparum isolate W2mef merozoite sur...    46   0.10   2
(FJ406606) Plasmodium falciparum isolate Wellcome merozoite ...    46   0.10   2
(FJ406619) Plasmodium falciparum isolate D10 merozoite surfa...    46   0.10   2
(FJ406613) Plasmodium falciparum isolate MAD20 merozoite sur...    46   0.10   2
(FJ406615) Plasmodium falciparum isolate HB3 merozoite surfa...    46   0.10   2
(FJ406614) Plasmodium falciparum isolate K1 merozoite surfac...    46   0.10   2
(FJ406611) Plasmodium falciparum isolate RO33 merozoite surf...    46   0.10   2
(FJ406609) Plasmodium falciparum isolate T9/96 merozoite sur...    46   0.10   2
(FJ406608) Plasmodium falciparum isolate T9/102 merozoite su...    46   0.10   2
(FJ406620) Plasmodium falciparum isolate D6 merozoite surfac...    46   0.10   2
(AF403477) Plasmodium falciparum merozoite surface protein 1...    46   0.10   2
(FJ406622) Plasmodium falciparum isolate 3D7 merozoite surfa...    46   0.10   2
(DQ927303) Tetrahymena malaccensis strain MP75 mitochondrion...    34   0.11   6
(EJ290617) 1095375003449 Global-Ocean-Sampling_GS-27-01-01-1...    32   0.11   4
(AC168475) Strongylocentrotus purpuratus clone R3-3117O8, WO...    36   0.11   9
(AE014185) Plasmodium falciparum 3D7 chromosome 10, complete...    38   0.11   10
(AE017263) Mesoplasma florum L1 complete genome.                   34   0.12   18
(AM470514) Vitis vinifera contig VV78X206853.3, whole genome...    30   0.12   5
(AF165818) Guillardia theta nucleomorph chromosome 1, comple...    32   0.12   12
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8...    34   0.12   12
(CU927997) S.lycopersicum DNA sequence from clone LE_HBa-64G...    34   0.12   9
(AC171136) Helobdella robusta clone CH306-1A7, complete sequ...    36   0.12   9
(EJ401981) 1093012060132 Global-Ocean-Sampling_GS-28-01-01-1...    38   0.13   3
(AC235323) Glycine max strain Williams 82 clone GM_WBb0078H0...    32   0.13   11
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    34   0.13   11
(AX392737) Sequence 27 from Patent WO0212526.                      32   0.14   8
(AR707084) Sequence 27 from patent US 6933145.                     32   0.14   8
(AM473440) Vitis vinifera contig VV78X181672.10, whole genom...    34   0.14   4
(AJ277590) Dictyostelium discoideum iplA gene for inositol 1...    36   0.14   4
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI...    30   0.15   12
(AF487277) Lecanicillium muscarium, complete genome.               40   0.15   4
(AC147011) Medicago truncatula clone mth2-150o13, complete s...    42   0.15   6
(BD061520) Genome DNA of symbiotic bacteria of aphid.              38   0.16   19
(AR409405) Sequence 1 from patent US 6632935.                      38   0.16   19
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum...    38   0.16   19
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    40   0.16   7
(CP001158) Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisu...    38   0.16   19
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)...    38   0.16   19
(FM153868) Sparus aurata EST, 5'-end sequence, clone cdn16P0...    42   0.16   2
(AM422018) Candidatus Phytoplasma australiense complete genome.    36   0.16   19
(AL731833) Mouse DNA sequence from clone RP23-72P19 on chrom...    38   0.17   8
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    36   0.17   18
(EI292372) GM_WBc0014J06.r GM_WBc Glycine max genomic clone ...    42   0.17   2
(CR835108) GR0AAA69DA10FM1 INRA BAC Bos taurus genomic clone...    46   0.17   2
(DQ851108) Bigelowiella natans plastid, complete genome.           32   0.18   9
(AC111141) Mus musculus chromosome 3, clone RP23-369G12, com...    38   0.19   7
(AC002524) Homo sapiens x BAC GS1-257G1 (Genome Systems Huma...    36   0.19   9
(AL731650) Mouse DNA sequence from clone RP23-368K3 on chrom...    50   0.20   1
(AC168060) Mus musculus BAC clone RP23-305A9 from chromosome...    50   0.20   1
(AL772317) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    50   0.20   1
(AC170879) Mus musculus chromosome 8 clone RP24-191F15, WORK...    50   0.20   1
(AC167361) Mus musculus chromosome 8 clone RP23-120B9, WORKI...    50   0.20   1
(ER579520) 1093015829055 Global-Ocean-Sampling_GS-36-01-01-2...    50   0.20   1
(ER375846) 1093041167406 Global-Ocean-Sampling_GS-34-01-01-1...    50   0.20   1
(EK248002) 1095460266548 Global-Ocean-Sampling_GS-31-01-01-1...    50   0.20   1
(BZ471879) BONQK13TR BO_1.6_2_KB_tot Brassica oleracea genom...    50   0.20   1
(DC226703) Plasmodium berghei strain ANKA cDNA clone:SG00671...    50   0.20   1
(CX344661) JGI_XZT23734.fwd NIH_XGC_tropTad5 Xenopus (Silura...    50   0.20   1
(AC172259) Bos taurus clone CH240-510G23, WORKING DRAFT SEQU...    36   0.20   10
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    34   0.20   6
(EC826178) SME00002995 esmbsro2 Sawyeria marylandensis cDNA,...    44   0.20   2
(AC190263) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    36   0.21   9
(FP236806) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.21   7
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    34   0.21   10
(BX248332) Zebrafish DNA sequence from clone CH211-212O2 in ...    34   0.21   10
(AC176422) Strongylocentrotus purpuratus clone R3-12F6, WORK...    38   0.21   6
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61...    34   0.22   13
(EK181620) 1095458123868 Global-Ocean-Sampling_GS-31-01-01-1...    46   0.22   2
(AC005308) Plasmodium falciparum chromosome 12 clone PFYAC49...    34   0.22   11
(AL844501) Plasmodium falciparum strain 3D7, chromosome 1.         36   0.22   11
(AC069407) Drosophila melanogaster 3L BAC RP98-30I5 (Roswell...    38   0.23   6
(AC175960) Strongylocentrotus purpuratus clone R3-17E05, WOR...    34   0.24   9
(AC004153) Plasmodium falciparum chromosome 12 clone PFYAC81...    46   0.24   13
(BX957283) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.25   13
(CP001357) Brachyspira hyodysenteriae WA1, complete genome.        40   0.25   16
(AC093776) Homo sapiens BAC clone RP11-145G20 from 4, comple...    36   0.25   7
(AC231667) Solanum tuberosum chromosome 11 clone RH058F17, *...    38   0.26   7
(EH013291) USDA-FP_186106 Lysiphlebus testaceipes adult whol...    38   0.27   3
(EL784570) mij304h11t1.1 Meloidogyne incognita J3-enriched c...    36   0.27   3
(CU457719) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   0.28   10
(CP000976) Borrelia duttonii Ly, complete genome.                  34   0.29   18
(AC180216) Strongylocentrotus purpuratus clone R3-3006P09, W...    32   0.29   11
(AE017332) Mycoplasma hyopneumoniae 232, complete genome.          38   0.29   16
(EI310681) GM_WBc0041A06.r GM_WBc Glycine max genomic clone ...    36   0.29   3
(EI883493) CAH1-62L2TV CAA1Ba Cicer arietinum genomic clone ...    34   0.29   3
(AC084417) Homo sapiens chromosome 4 clone RP11-725O24, WORK...    36   0.30   11
(DD010736) Diagnosis of known genetic Parameters within the ...    36   0.32   14
(BX640544) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   0.33   7
(AC184536) Strongylocentrotus purpuratus clone R3-4017B7, WO...    36   0.33   9
(AC155882) Medicago truncatula chromosome 7 clone mte1-6p16,...    36   0.34   6
(FJ478177) Enicospilus sp. MD-2008 mitochondrion, partial ge...    34   0.34   6
(EI359964) GM_WBc0112P19.f GM_WBc Glycine max genomic clone ...    36   0.34   3
(AM478487) Vitis vinifera, whole genome shotgun sequence, co...    40   0.35   5
(BX248583) Blochmannia floridanus complete genome.                 38   0.35   21
(AC235529) Callicebus moloch clone LB5-67C23, WORKING DRAFT ...    36   0.35   7
(AC217034) Populus trichocarpa clone POP025-E19, complete se...    36   0.36   11
(AP009289) Solanum lycopersicum genomic DNA, chromosome 8, c...    36   0.36   10
(AF298201) Dictyostelium discoideum putative transposon DDT-...    38   0.36   4
(EC819273) SME00007330 esmbsro2 Sawyeria marylandensis cDNA,...    32   0.37   3
(AC006278) Plasmodium falciparum chromosome 12 clone PFYAC34...    32   0.37   12
(AM398681) Flavobacterium psychrophilum JIP02/86 complete ge...    40   0.38   20
(AC178828) Strongylocentrotus purpuratus clone R3-25J14, WOR...    36   0.38   8
(GC697312) Sequence 12557 from patent US 6812339.                  32   0.38   13
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18...    46   0.38   11
(BX005338) Zebrafish DNA sequence from clone DKEY-14I9 in li...    38   0.38   9
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g...    38   0.39   20
(AC114929) Homo sapiens chromosome 5 clone CTD-2013M11, comp...    36   0.39   5
(EU626443) Gossypioides kirkii clone BAC 096G05, complete se...    36   0.39   8
(AC214418) Populus trichocarpa clone POP106-D21, complete se...    42   0.39   6
(AM485466) Vitis vinifera, whole genome shotgun sequence, co...    32   0.40   7
(CU928186) Brassica rapa subsp. pekinensis clone KBrH102J15,...    34   0.40   10
(BP809328) Arabidopsis thaliana cDNA clone:RAFL24-21-C22, 5'...    34   0.40   3
(CP000609) Methanococcus maripaludis C5, complete genome.          38   0.41   19
(AC212928) Populus trichocarpa clone POP043-P14, complete se...    36   0.42   7
(FP085591) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.42   10
(CR936240) Zebrafish DNA sequence from clone DKEY-233K19 in ...    36   0.42   11
(AC005858) Homo sapiens 12q24.2 PAC RPCI3-446N13 (Roswell Pa...    42   0.44   2
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete...    32   0.44   19
(AC072063) Homo sapiens BAC clone RP11-697B15 from 7, comple...    36   0.44   8
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771...    32   0.45   8
(AC016440) Homo sapiens clone RP11-30I11, WORKING DRAFT SEQU...    48   0.45   7
(AC184434) Strongylocentrotus purpuratus clone R3-3014I6, WO...    40   0.45   5
(CS468880) Sequence 71 from Patent EP1748080.                      34   0.46   8
(CS419357) Sequence 71 from Patent WO2006094836.                   34   0.46   8
(AZ527826) ENTCQ77TR Entamoeba histolytica Sheared DNA Entam...    34   0.47   3
(AC158126) Mus musculus chromosome 5, clone RP24-220P21, com...    32   0.47   10
(CU929296) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   0.47   8
(AM478355) Vitis vinifera, whole genome shotgun sequence, co...    36   0.48   6
(CP001185) Thermosipho africanus TCF52B, complete genome.          36   0.49   20
(DY895312) CeleSEQ15106 Cunninghamella elegans pBluescript (...    34   0.50   3
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen...    34   0.50   20
(AC010360) Homo sapiens chromosome 5 clone CTD-2033H3, WORKI...    38   0.50   9
(DT339328) JBW096E02.b_008.abi Pineapple week 5-10 nematode-...    36   0.51   3
(BD452669) Diagnosis of Diseases Associated with tumor suppr...    46   0.53   2
(AX251148) Sequence 116 from Patent WO0168912.                     46   0.53   2
(AC184687) Strongylocentrotus purpuratus clone R3-3123P7, **...    38   0.53   3
(FC770421) CBBN583.rev CBBN Lottia gigantea 3,4,5,6.5d Larva...    32   0.54   3
(AP006852) Candida albicans genomic DNA, chromosome 7, compl...    36   0.54   16
(AM635512) Entamoeba dispar GSS, clone dispar14e11.p1k.            40   0.55   3
(CU633202) M.truncatula DNA sequence from clone MTH2-156J7 o...    34   0.56   7
(BZ470648) BONQU71TR BO_1.6_2_KB_tot Brassica oleracea genom...    36   0.56   2
(ED632150) GM_WBa0034K12.f GM_WBa Glycine max genomic clone ...    46   0.56   2
(CU104792) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   0.56   4
(AL139386) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    36   0.56   7
(CT025928) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   0.57   9
(AZ538165) ENTEI81TR Entamoeba histolytica Sheared DNA Entam...    34   0.57   3
(AX345694) Sequence 765 from Patent WO0200928.                     34   0.57   5
(CU928964) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   0.58   8
(CU694677) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.58   6
(AX344555) Sequence 6 from Patent WO0200932.                       42   0.58   9
(AM488450) Vitis vinifera, whole genome shotgun sequence, co...    32   0.58   8
(FP236213) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   0.58   7
(AL929032) Zebrafish DNA sequence from clone DKEY-4C23 in li...    36   0.59   11
(AM450702) Vitis vinifera contig VV78X132256.9, whole genome...    36   0.60   4
(CT033813) Zebrafish DNA sequence from clone CH211-193I15.         38   0.60   8
(CU466282) Zebrafish DNA sequence from clone DKEY-253L8 in l...    38   0.60   6
(AM459074) Vitis vinifera, whole genome shotgun sequence, co...    36   0.61   6
(CU633919) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.61   9
(AC232517) Brassica rapa subsp. pekinensis clone KBrB070K15,...    38   0.61   8
(AC217248) Solanum lycopersicum chromosome 12 clone LE_HBa-3...    40   0.62   7
(BX571977) Zebrafish DNA sequence from clone DKEY-9E15 in li...    34   0.64   5
(AC203226) Rhesus Macaque  BAC CH250-80G23 () complete seque...    38   0.64   6
(AL953886) Zebrafish DNA sequence from clone CH211-241A17 in...    38   0.64   7
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge...    38   0.65   14
(AC116987) Dictyostelium discoideum chromosome 2 map 3527441...    34   0.65   5
(AC009909) Drosophila melanogaster clone BACR30P05, complete...    36   0.65   5
(DQ158857) Bigelowiella natans nucleomorph chromosome 2, com...    38   0.65   6
(CU914811) Zebrafish DNA sequence from clone CH1073-238A17 i...    44   0.65   5
(AC210510) Populus trichocarpa clone POP054-E03, complete se...    42   0.66   5
(BX005310) Zebrafish DNA sequence from clone CH211-214J2 in ...    36   0.67   8
(EI297806) GM_WBc0022J24.f GM_WBc Glycine max genomic clone ...    42   0.67   2
(AC182650) Populus trichocarpa clone Pop1-117O4, complete se...    46   0.67   6
(CT573002) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.68   6
(BX957351) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    40   0.68   11
(BX276117) Zebrafish DNA sequence from clone CH211-112K18 in...    34   0.69   8
(AC235891) Glycine max strain Williams 82 clone GM_WBc0069F2...    34   0.70   11
(AC150030) Sorex araneus clone SA_Ba-88M8, WORKING DRAFT SEQ...    40   0.70   5
(EV842624) TT1DW74TV Tetrahymena thermophila SB210 cDNA libr...    42   0.70   2
(AC012301) Homo sapiens chromosome 18, clone RP11-383D22, co...    32   0.70   9
(AC217496) Solanum lycopersicum chromosome 12 clone SL_EcoRI...    38   0.71   5
(AC189600) Brassica rapa subsp. pekinensis clone KBrH014M07,...    42   0.71   7
(AC125120) Mus musculus BAC clone RP24-267M16 from chromosom...    44   0.72   8
(BX323590) Zebrafish DNA sequence from clone CH211-42I9 in l...    36   0.74   10
(CT990565) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   0.74   10
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d...    34   0.75   5
(CR847798) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.76   9
(BX664629) Zebrafish DNA sequence from clone DKEY-30G10 in l...    46   0.76   9
(AC181887) Strongylocentrotus purpuratus clone R3-1017F22, W...    40   0.77   7
(CP000883) Hemiselmis andersenii chromosome 3, complete sequ...    40   0.77   9
(AL844147) Mouse DNA sequence from clone RP23-145N4 on chrom...    48   0.77   1
(AC122199) Mus musculus BAC clone RP23-57C9 from chromosome ...    48   0.77   1
(AC216839) Populus trichocarpa clone POP031-N06, complete se...    48   0.77   1
(Z95559) Caenorhabditis elegans YAC Y41E3.                         48   0.77   1
(AB299847) Entamoeba histolytica SREHP gene for serine-rich ...    48   0.77   1
(AB096673) Entamoeba histolytica SREHP gene for serine-rich ...    48   0.77   1
(AB096672) Entamoeba histolytica SREHP gene for serine-rich ...    48   0.77   1
(AC096666) Homo sapiens BAC clone RP11-337O8 from 2, complet...    48   0.77   1
(AC141812) Apis mellifera clone CH224-61C5, WORKING DRAFT SE...    48   0.77   1
(AC190365) Atelerix albiventris clone LB4-465N13, WORKING DR...    48   0.77   1
(AZ667536) ENTMR95TF Entamoeba histolytica Sheared DNA Entam...    48   0.77   1
(AZ343737) 1M0077G20F Mouse 10kb plasmid UUGC1M library Mus ...    48   0.77   1
(EK084099) 1092961129632 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.77   1
(EK035635) 1092959447846 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.77   1
(DH345371) Oryzias latipes Fosmid clone:GOLWFno717_j18, reve...    48   0.77   1
(EH215661) USDA-FP_178460 WHMH (pink hibiscus mealybug) Maco...    48   0.77   1
(CX571294) TTE00015445 Amplicon Express - Conjugative Form T...    48   0.77   1
(AM054780) Isotricha prostoma EST, clone Ip06_B12.                 48   0.77   1
(CK574137) 2272 Plasmodium yoelii liver stage LCM cDNA libra...    48   0.77   1
(BM171267) EST573790 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM170932) EST573455 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM170916) EST573439 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM169787) EST572310 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM169735) EST572258 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM169682) EST572205 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM169044) EST571567 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM168938) EST571461 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM167712) EST570235 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM167591) EST570114 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM167443) EST569966 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM166267) EST568790 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM164767) EST567290 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM161742) EST564265 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BM160577) EST563100 PyBS Plasmodium yoelii yoelii cDNA clon...    48   0.77   1
(BJ426635) Dictyostelium discoideum cDNA clone:ddv59o14, 5' ...    48   0.77   1
(BJ396560) Dictyostelium discoideum cDNA clone:dds43i05, 5' ...    48   0.77   1
(BJ394651) Dictyostelium discoideum cDNA clone:dds36c01, 5' ...    48   0.77   1
(BJ336604) Dictyostelium discoideum cDNA clone:dda54a17, 5' ...    48   0.77   1
(BJ335513) Dictyostelium discoideum cDNA clone:dda50d13, 5' ...    48   0.77   1
(BJ332776) Dictyostelium discoideum cDNA clone:dda40e20, 5' ...    48   0.77   1
(BF297988) 058PbH01 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ...    48   0.77   1
(BB973594) Plasmodium berghei str. ANKA cDNA clone: OK003377...    48   0.77   1
(EV827887) TT1DN16TV Tetrahymena thermophila SB210 cDNA libr...    48   0.77   1
(BD453025) Diagnosis of Diseases Associated with tumor suppr...    34   0.78   7
(AX344503) Sequence 350 from Patent WO0200926.                     34   0.78   7
(AX251504) Sequence 472 from Patent WO0168912.                     34   0.78   7
(AM445701) Vitis vinifera contig VV78X077970.11, whole genom...    38   0.78   4
(EV834039) TT1D551TV Tetrahymena thermophila SB210 cDNA libr...    42   0.79   2
(BX649466) Zebrafish DNA sequence from clone DKEY-31C8 in li...    40   0.79   8
(EJ493180) 1095403556081 Global-Ocean-Sampling_GS-28-01-01-1...    46   0.79   2
(CN208965) Tor9473 Gametophyte rehydration Library Syntrichi...    32   0.80   4
(AL935209) Zebrafish DNA sequence from clone DKEY-61N16.           34   0.80   7
(ET989838) CHO_OF757xc09f1.ab1 CHO_OF Nicotiana tabacum geno...    44   0.81   2
(BH153649) ENTQY04TF Entamoeba histolytica Sheared DNA Entam...    46   0.82   2
(AC007733) Homo sapiens clone RP11-82A1, WORKING DRAFT SEQUE...    38   0.82   7
(AC154799) Mus musculus BAC clone RP23-79K21 from chromosome...    38   0.82   7
(AL590631) Human DNA sequence from clone RP11-414B7 on chrom...    40   0.83   8
(AC210332) Populus trichocarpa clone POP017-D18, complete se...    38   0.84   7
(BX000347) Zebrafish DNA sequence from clone DKEY-66C4 in li...    40   0.84   10
(AL928900) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.85   9
(FH963710) CHO_OF6778xe12r1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   0.85   2
(CP001083) Clostridium botulinum Ba4 str. 657, complete genome.    36   0.85   17
(EV841603) TT1DT18TH Tetrahymena thermophila SB210 cDNA libr...    42   0.86   2
(EC270156) TT1BY47TV Tetrahymena thermophila SB210 cDNA libr...    42   0.86   2
(DY678390) TT1AV31TV Tetrahymena thermophila EST library str...    42   0.87   2
(CR940353) Theileria annulata genomic DNA chromosome 4.            36   0.87   18
(EV838176) TT1DZ52TV Tetrahymena thermophila SB210 cDNA libr...    42   0.87   2
(DY678389) TT1AV31TH Tetrahymena thermophila EST library str...    42   0.87   2
(EV841041) TT1E732TV Tetrahymena thermophila SB210 cDNA libr...    42   0.87   2
(BX004874) Zebrafish DNA sequence from clone CH211-39E15 in ...    42   0.87   7
(EC274443) TT1CK93TV Tetrahymena thermophila SB210 cDNA libr...    42   0.88   2
(AC108178) Felis catus clone RP86-113N11, WORKING DRAFT SEQU...    40   0.88   6
(AC124197) Mus musculus BAC clone RP23-298C4 from 15, comple...    34   0.89   10
(BJ335404) Dictyostelium discoideum cDNA clone:dda50g04, 5' ...    36   0.89   3
(BH149218) ENTPU44TR Entamoeba histolytica Sheared DNA Entam...    40   0.90   2
(BX936383) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   0.91   13
(AC008109) Homo sapiens chromosome 18, clone RP11-476K15, co...    34   0.92   7
(AX345668) Sequence 739 from Patent WO0200928.                     32   0.92   6
(CR318631) Zebrafish DNA sequence from clone DKEY-207D5 in l...    40   0.93   11
(AL844521) Zebrafish DNA sequence from clone DKEY-155O15 in ...    42   0.94   7
(BJ330734) Dictyostelium discoideum cDNA clone:dda32g13, 5' ...    36   0.95   3
(AC233457) Solanum tuberosum chromosome 5 clone RH092A08, **...    40   0.96   8
(BJ332781) Dictyostelium discoideum cDNA clone:dda40f23, 5' ...    36   0.96   3
(BJ339668) Dictyostelium discoideum cDNA clone:dda58n20, 5' ...    36   0.96   3
(BJ330660) Dictyostelium discoideum cDNA clone:dda32g08, 5' ...    36   0.97   3
(AC055841) Homo sapiens chromosome 15 clone RP11-707D22 map ...    34   0.98   7
(AC151806) Medicago truncatula clone mth2-57p22, complete se...    32   0.98   9
(BJ391949) Dictyostelium discoideum cDNA clone:dds25f19, 5' ...    36   0.98   3
(AB267275) Rhagophthalmus ohbai mitochondrial DNA, complete ...    36   0.98   5
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    36   0.98   10
(BJ335363) Dictyostelium discoideum cDNA clone:dda49m20, 5' ...    36   0.99   3
(BJ336112) Dictyostelium discoideum cDNA clone:dda52d22, 5' ...    36   0.99   3
(CU929188) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    42   1.0    6
(BJ396769) Dictyostelium discoideum cDNA clone:dds43k21, 5' ...    36   1.0    3
(AM482079) Vitis vinifera contig VV78X131953.3, whole genome...    34   1.0    5
(CR847824) Zebrafish DNA sequence from clone DKEY-110J1 in l...    34   1.0    10
(EU877950) Sphaerius sp. BT0074 mitochondrion, complete genome.    34   1.0    6
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            32   1.0    17
(AC092787) Homo sapiens chromosome UNK clone RP11-143P19, WO...    44   1.0    7
(BJ332304) Dictyostelium discoideum cDNA clone:dda38k17, 5' ...    36   1.0    3
(AJ242872) Ceratitis capitata complete mitochondrial genome.       32   1.0    5
(DQ927305) Tetrahymena pigmentosa strain UM1060 mitochondrio...    36   1.0    8
(ED799021) MG__Ba0047B03f MG__Ba Mimulus guttatus genomic, g...    34   1.0    3
(AC019087) Homo sapiens chromosome X clone RP11-362A20, WORK...    34   1.1    12
(AC116100) Dictyostelium discoideum chromosome 2 map 6163571...    34   1.1    6
(AC023141) Homo sapiens BAC clone RP11-548K12 from 7, comple...    36   1.1    8
(EU494455) Drosophila fraburu voucher 109373 16S ribosomal R...    38   1.1    2
(FC680201) CAXX14013.rev CAXX Lottia gigantea from male gona...    32   1.1    3
(AC092538) Homo sapiens BAC clone RP11-101J2 from 4, complet...    32   1.1    10
(AX344565) Sequence 16 from Patent WO0200932.                      38   1.1    15
(AX344564) Sequence 15 from Patent WO0200932.                      30   1.1    15
(CP000395) Borrelia afzelii PKo, complete genome.                  36   1.1    17
(AC189250) Brassica rapa subsp. pekinensis clone KBrB019B16,...    38   1.1    8
(AC215773) Solanum tuberosum chromosome 6 clone RHPOTKEY068I...    38   1.1    9
(CT025853) Zebrafish DNA sequence from clone CH73-22B10 in l...    34   1.1    8
(CR847971) Zebrafish DNA sequence from clone CH211-147M20 in...    34   1.2    9
(AM452335) Vitis vinifera contig VV78X028847.12, whole genom...    38   1.2    3
(AC226731) Solanum lycopersicum chromosome 6 clone C06SLm011...    44   1.2    8
(AC226047) Musa acuminata clone BAC MA4-86B3, complete seque...    34   1.2    6
(AC150145) Gallus gallus clone WAG-66N16, WORKING DRAFT SEQU...    34   1.2    6
(AP008934) Staphylococcus saprophyticus subsp. saprophyticus...    34   1.2    20
(AC217698) Solanum tuberosum chromosome 1 clone RH050N11, **...    34   1.2    9
(AE015450) Mycoplasma gallisepticum strain R complete genome.      32   1.2    17
(AC019976) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    36   1.2    4
(FC746634) CBBI2645.rev CBBI Lottia gigantea 26h,37h,61h Lar...    32   1.2    3
(AC221146) Bos taurus clone CH240-395A1, WORKING DRAFT SEQUE...    36   1.2    4
(AC235468) Glycine max strain Williams 82 clone GM_WBc0036F1...    36   1.2    11
(AX347010) Sequence 2081 from Patent WO0200928.                    38   1.2    2
(AC210554) Populus trichocarpa clone POP103-K18, complete se...    34   1.2    9
(AF037042) Dictyostelium discoideum ras-related GTPase RacF1...    28   1.2    6
(EJ915513) 1093018558569 Global-Ocean-Sampling_GS-30-02-01-1...    38   1.2    3
(FC649835) CAXW10950.rev CAXW Lottia gigantea from female go...    32   1.2    3
(BZ459886) BONQH43TF BO_1.6_2_KB_tot Brassica oleracea genom...    36   1.2    3
(EF710659) Glyptapanteles indiensis clone BAC 9I20, complete...    38   1.3    9
(AL512594) Human DNA sequence from clone RP11-549A6 on chrom...    44   1.3    8
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    32   1.3    19
(CR388421) Zebrafish DNA sequence from clone CH211-73B10 in ...    36   1.3    5
(AL772362) Zebrafish DNA sequence from clone CH211-173K16 in...    32   1.3    10
(AF547983) Schizosaccharomyces japonicus mitochondrial DNA, ...    30   1.3    9
(AC002541) Homo sapiens BAC clone CTB-43K6 from 7, complete ...    40   1.3    8
(FM995165) Candida castellii complete mitochondrial genome, ...    38   1.3    5
(AC171341) Macaca mulatta clone CH250-498B22, WORKING DRAFT ...    40   1.3    6
(CP000488) Candidatus Ruthia magnifica str. Cm (Calyptogena ...    38   1.3    18
(AC068775) Homo sapiens 12 BAC RP11-291B21 (Roswell Park Can...    38   1.3    6
(AM285305) Spiroplasma citri GII3-3X chromosome, contig Cont...    34   1.3    11
(AC232763) Solanum lycopersicum cv. Heinz 1706, chromosome 5...    30   1.3    10
(AC232503) Brassica rapa subsp. pekinensis clone KBrB057E04,...    34   1.3    9
(AC178111) Strongylocentrotus purpuratus clone R3-3073J14, W...    40   1.4    6
(AC215409) Solanum lycopersicum chromosome 2 clone C02HBa017...    30   1.4    12
(AC021021) Homo sapiens BAC clone RP11-557N1 from 2, complet...    32   1.4    8
(AC167071) Oryctolagus cuniculus clone LB1-147F5, WORKING DR...    40   1.4    7
(ET987218) CHO_OF199xk19r1.ab1 CHO_OF Nicotiana tabacum geno...    36   1.4    2
(AC167993) Bos taurus clone CH240-173M17, WORKING DRAFT SEQU...    38   1.4    8
(FC679005) CAXX12915.rev CAXX Lottia gigantea from male gona...    32   1.4    3
(AC020570) Homo sapiens chromosome 8 clone RP11-300E4, WORKI...    36   1.4    7

>(C92555) Dictyostelium discoideum slug cDNA, clone SSE681.
          Length = 584

 Score = 1023 bits (516), Expect(2) = 0.0
 Identities = 516/516 (100%)
 Strand = Plus / Plus


Query: 627  gtaccaaatgatatggattgtgaagttccttcgattttagttgaatttataattaaacat 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59   gtaccaaatgatatggattgtgaagttccttcgattttagttgaatttataattaaacat 118


Query: 687  caaattaaagaattggaattacataatttaccagcaattaaaaacccaaattttacagag 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119  caaattaaagaattggaattacataatttaccagcaattaaaaacccaaattttacagag 178


Query: 747  aataaaccaattttaaattattcatttctttcaaacagaattgagctatgtaatattcaa 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179  aataaaccaattttaaattattcatttctttcaaacagaattgagctatgtaatattcaa 238


Query: 807  catttatgcttaaagaatcaattgttgtcatgtgatagagtgatggattttttagaacta 866
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239  catttatgcttaaagaatcaattgttgtcatgtgatagagtgatggattttttagaacta 298


Query: 867  attccaagattatcaagtttagatttaacaaataatagaattggtttagattatagagag 926
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299  attccaagattatcaagtttagatttaacaaataatagaattggtttagattatagagag 358


Query: 927  tgctttacaaatgcaattggaaaggcaaatcaattatcaagtttaaagctatcttcaaat 986
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359  tgctttacaaatgcaattggaaaggcaaatcaattatcaagtttaaagctatcttcaaat 418


Query: 987  attttaaaagataatatattacaattattaccaattttaaaatcaaattgttatcaatta 1046
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419  attttaaaagataatatattacaattattaccaattttaaaatcaaattgttatcaatta 478


Query: 1047 actacattagatcttagtgaaaattatataactgatgaatcaagtaaatcaattgaagaa 1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479  actacattagatcttagtgaaaattatataactgatgaatcaagtaaatcaattgaagaa 538


Query: 1107 tttattcaatttaataaaacaattgaatctttaaat 1142
            ||||||||||||||||||||||||||||||||||||
Sbjct: 539  tttattcaatttaataaaacaattgaatctttaaat 574

 Score =  111 bits (56), Expect(2) = 0.0
 Identities = 58/59 (98%)
 Strand = Plus / Plus


Query: 568 attattattatttaaagagaattttaaacttgaganacttaaaatctcaacagcattag 626
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1   attattattatttaaagagaattttaaacttgagaaacttaaaatctcaacagcattag 59

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 1,766,581,665
Number of extensions: 130849967
Number of successful extensions: 15439202
Number of sequences better than 10.0: 1303
Length of query: 1142
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 1118
Effective length of database: 102,084,959,077
Effective search space: 114130984248086
Effective search space used: 114130984248086
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.31
Homology vs Protein 
Query= Contig-U05046-1 (Contig-U05046-1Q) /CSM_Contig/Contig-U05046-1Q.Seq.d
         (1142 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000087_1029(CP000087|pid:none) Rickettsia bellii RML369-C, com...    37   1.0
CR380954_419(CR380954|pid:none) Candida glabrata strain CBS138 c...    37   1.3
(Q5DU56) RecName: Full=Protein NLRC3;                                  37   1.7
AK079766_1(AK079766|pid:none) Mus musculus 0 day neonate thymus ...    37   1.7
AF063866_241(AF063866|pid:none) Melanoplus sanguinipes entomopox...    37   1.7
BC160196_1(BC160196|pid:none) Synthetic construct Mus musculus c...    37   1.7
(A2BZ03) RecName: Full=Lysyl-tRNA synthetase;          EC=6.1.1....    36   2.2
EU643474_20(EU643474|pid:none) Adineta vaga clone Av240_B G-prot...    36   2.9
BC087492_1(BC087492|pid:none) Xenopus laevis hypothetical LOC496...    36   2.9
AC140547_3(AC140547|pid:none) Medicago truncatula clone mth2-17p...    36   2.9
AE010300_3026(AE010300|pid:none) Leptospira interrogans serovar ...    35   3.8
AE016823_1021(AE016823|pid:none) Leptospira interrogans serovar ...    35   3.8
(Q6P5J6) RecName: Full=Leucine-rich repeat-containing protein 42...    35   3.8
CP000728_1913(CP000728|pid:none) Clostridium botulinum F str. La...    35   3.8
CP000849_411(CP000849|pid:none) Rickettsia bellii OSU 85-389, co...    35   5.0
AM412317_1945(AM412317|pid:none) Clostridium botulinum A str. AT...    35   6.5
AC126784_28(AC126784|pid:none) Medicago truncatula clone mth2-36...    35   6.5
CP001083_2070(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    35   6.5
CR382126_1068(CR382126|pid:none) Kluyveromyces lactis strain NRR...    34   8.5
AM502254_692(AM502254|pid:none) Leishmania infantum chromosome 36.     34   8.5
AE014187_403(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    34   8.5

>CP000087_1029(CP000087|pid:none) Rickettsia bellii RML369-C, complete
            genome.
          Length = 472

 Score = 37.4 bits (85), Expect = 1.0
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
 Frame = +3

Query: 810  LCLKNQLLSCDRVMD---FLELIPRLSSLDLTNNRIGLDYRECFTNAIGKANQXXXXXXX 980
            L + N L+  +R +    FL+    L+ L++ +N+IG ++     +A+ K N+
Sbjct: 145  LDISNNLMGKERAISNAFFLKSNTSLTELNIASNKIGKEWTTVIFDAL-KFNKSLRVLNL 203

Query: 981  XXXXXDN---------ILQLLPILKSNCYQLTTLDLSENYITDESSKSIEEFIQFNKTIE 1133
                 +          I  +   LKSN   LTTLD+S N I  E +  I   ++FNK++
Sbjct: 204  SNNTLEREKTIIVTKWITAIFYALKSN-NSLTTLDISNNLIGREEAIVIFNALKFNKSLT 262

Query: 1134 SLN 1142
             LN
Sbjct: 263  ELN 265

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,119,413,035
Number of extensions: 18223526
Number of successful extensions: 42883
Number of sequences better than 10.0: 21
Number of HSP's gapped: 42825
Number of HSP's successfully gapped: 23
Length of query: 380
Length of database: 1,061,185,681
Length adjustment: 130
Effective length of query: 250
Effective length of database: 636,287,441
Effective search space: 159071860250
Effective search space used: 159071860250
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.88  gvh: 0.05  alm: 0.39  top: 0.00  tms: 0.00  mit: 0.30  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: vacuolar
	  4.0 %: mitochondrial
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U05046-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0