NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04925-1
Contig ID Contig-U04925-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Contig-U04925-1Q.Seq.d
CGGGCCCCCCCTCGGGTCGACCCCGCGTCCGCACTAAATGATGAACTTCA
AATATATTATTAGTATTTTTATTTTTATATTATATATTAATCTTATTGAT
GGCGCAAAAGAATTAACACCATTCATTTATGGTGATAGAATTAGTATGGA
ATGTAAAGATAACGAAGGGAATTGGAAATTAGGTCCAATTTGTTTAAATC
AAAAACAAGAACTTAGTGTATATTATGGCAGAGATGCACCACTTTATTGT
GGAATTTATATAGATGAAAAAGAACTTAATAGAATTAAAGATGTATTAAA
TAGAAATTCATCATGGGAATGTAGAATACCAATATCATCAGAAAGTAATA
CTGATGATATTTATATACCACTTTCAATTCAATTATGGGGATATCCTCAA
GATGATCATTTAGATATTACAACTCACTATAATTTTATATTTCATGTTGA
AAAAGGTATTATAATTGGTGCAACTTTATATCCAGTTAAAGATAAATTTC
AAGATGTTCGTAAGGGTGCAGTATTTACAATTCATGGTGCAATTAAATGG
TTTAATGGAGGTTCTCATGTTGAATTAAATGATTCATTGAAATTAATAAA
AGATAATACAAATGATTTTTTAAATAATTTAGATTATTGGATTGTTATCC
TTTGGATTGTTTTATCAATGTTNACATCTTTAATTTTATTTTCATTAATT
TATAAATATAAATTAAAACCAAATTTAATAAGAAAATATTTAAAAAATGA
TTAGGTAAAAAAAAAAAAATAAAAAATAAAAAATAAAAAATAAAAAATTA
AAAAATAAAATTAAAAAAAAAAATAAAATTTAAAAAATAAAATTTTAATT
TTAAACCACCATTATTCATCA
Gap no gap
Contig length 871
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 4505769
End point 4506608
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U04925
List of clone(s) 

est1=VSI880F,1,455
est2=SSD822F,34,255
est3=SSD822Z,327,872
Translated Amino Acid sequence 
gpplgstprph*MMNFKYIISIFIFILYINLIDGAKELTPFIYGDRISMECKDNEGNWKL
GPICLNQKQELSVYYGRDAPLYCGIYIDEKELNRIKDVLNRNSSWECRIPISSESNTDDI
YIPLSIQLWGYPQDDHLDITTHYNFIFHVEKGIIIGATLYPVKDKFQDVRKGAVFTIHGA
IKWFNGGSHVELNDSLKLIKDNTNDFLNNLDYWIVILWIVLSMXTSLILFSLIYKYKLKP
NLIRKYLKND*vkkkk*kiknkk*kikk*n*kkk*nlknkililnhhyss
Translated Amino Acid sequence (All Frames) 
Frame A:
rapprvdpasalndelqiyy*yfyfyiiy*sy*wrkrintihlw**n*ygm*r*rrelei
rsnlfksktrt*cilwqrcttllwnlyr*krt**n*rcik*kfimgm*ntniirk*y**y
lyttfnsimgissr*sfryynsl*fyisc*kryynwcnfiss*r*isrcs*gcsiynswc
n*mv*wrfsc*ik*fieinkr*yk*ffk*frlldcypldcfinvxifnfifinl*i*ikt
kfnkkifkk*lgkkkkiknkk*kikn*kiklkkkikfkk*nfnfkpplfi


Frame B:
gpplgstprph*MMNFKYIISIFIFILYINLIDGAKELTPFIYGDRISMECKDNEGNWKL
GPICLNQKQELSVYYGRDAPLYCGIYIDEKELNRIKDVLNRNSSWECRIPISSESNTDDI
YIPLSIQLWGYPQDDHLDITTHYNFIFHVEKGIIIGATLYPVKDKFQDVRKGAVFTIHGA
IKWFNGGSHVELNDSLKLIKDNTNDFLNNLDYWIVILWIVLSMXTSLILFSLIYKYKLKP
NLIRKYLKND*vkkkk*kiknkk*kikk*n*kkk*nlknkililnhhyss


Frame C:
gppsgrprvrtk**tsnillvflflyyilillmaqkn*hhsfmvielvwnvkitkgign*
vqfv*iknknlvyimaemhhfivefi*mkknlielkmy*ieihhgnveyqyhqkvilmif
iyhfqfnygdilkmii*ilqltiilyfmlkkvl*lvqlyiqlkinfkmfvrvqylqfmvq
lnglmevlmln*mih*n**kiiqmif*ii*iigllsfglfyqcxhl*fyfh*finin*nq
i**eni*kmir*kkknkk*kiknkklknkikkknki*kikf*f*ttiih
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04925-1 (Contig-U04925-1Q)
/CSM_Contig/Contig-U04925-1Q.Seq.d
         (871 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Conti...  1170  0.0
Contig-U06959-1 (Contig-U06959-1Q) /CSM_Contig/Conti...    46  6e-05
Contig-U01539-1 (Contig-U01539-1Q) /CSM_Contig/Conti...    44  3e-04
Contig-U14905-1 (Contig-U14905-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U06085-1 (Contig-U06085-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U05312-1 (Contig-U05312-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U02284-1 (Contig-U02284-1Q) /CSM_Contig/Conti...    40  0.004
Contig-U14423-1 (Contig-U14423-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U11983-1 (Contig-U11983-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U02029-1 (Contig-U02029-1Q) /CSM_Contig/Conti...    36  0.061

>Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Contig-U04925-1Q.Seq.d
          Length = 871

 Score = 1170 bits (590), Expect = 0.0
 Identities = 593/593 (100%)
 Strand = Plus / Plus

                                                                       
Query: 90  atcttattgatggcgcaaaagaattaacaccattcatttatggtgatagaattagtatgg 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atcttattgatggcgcaaaagaattaacaccattcatttatggtgatagaattagtatgg 149

                                                                       
Query: 150 aatgtaaagataacgaagggaattggaaattaggtccaatttgtttaaatcaaaaacaag 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aatgtaaagataacgaagggaattggaaattaggtccaatttgtttaaatcaaaaacaag 209

                                                                       
Query: 210 aacttagtgtatattatggcagagatgcaccactttattgtggaatttatatagatgaaa 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 aacttagtgtatattatggcagagatgcaccactttattgtggaatttatatagatgaaa 269

                                                                       
Query: 270 aagaacttaatagaattaaagatgtattaaatagaaattcatcatgggaatgtagaatac 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagaacttaatagaattaaagatgtattaaatagaaattcatcatgggaatgtagaatac 329

                                                                       
Query: 330 caatatcatcagaaagtaatactgatgatatttatataccactttcaattcaattatggg 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 caatatcatcagaaagtaatactgatgatatttatataccactttcaattcaattatggg 389

                                                                       
Query: 390 gatatcctcaagatgatcatttagatattacaactcactataattttatatttcatgttg 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gatatcctcaagatgatcatttagatattacaactcactataattttatatttcatgttg 449

                                                                       
Query: 450 aaaaaggtattataattggtgcaactttatatccagttaaagataaatttcaagatgttc 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aaaaaggtattataattggtgcaactttatatccagttaaagataaatttcaagatgttc 509

                                                                       
Query: 510 gtaagggtgcagtatttacaattcatggtgcaattaaatggtttaatggaggttctcatg 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtaagggtgcagtatttacaattcatggtgcaattaaatggtttaatggaggttctcatg 569

                                                                       
Query: 570 ttgaattaaatgattcattgaaattaataaaagataatacaaatgattttttaaataatt 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ttgaattaaatgattcattgaaattaataaaagataatacaaatgattttttaaataatt 629

                                                                
Query: 630 tagattattggattgttatcctttggattgttttatcaatgttnacatcttta 682
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tagattattggattgttatcctttggattgttttatcaatgttnacatcttta 682


 Score = 79.8 bits (40), Expect = 5e-15
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                  
Query: 12 tcgggtcgaccccgcgtccgcactaaatgatgaacttcaa 51
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tcgggtcgaccccgcgtccgcactaaatgatgaacttcaa 51


 Score = 58.0 bits (29), Expect = 2e-08
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 843 ttttaattttaaaccaccattattcatca 871
           |||||||||||||||||||||||||||||
Sbjct: 843 ttttaattttaaaccaccattattcatca 871


>Contig-U06959-1 (Contig-U06959-1Q) /CSM_Contig/Contig-U06959-1Q.Seq.d
          Length = 479

 Score = 46.1 bits (23), Expect = 6e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tcgggtcgaccccgcgtccgcac 34
          |||||||||||||||||||||||
Sbjct: 12 tcgggtcgaccccgcgtccgcac 34


>Contig-U01539-1 (Contig-U01539-1Q) /CSM_Contig/Contig-U01539-1Q.Seq.d
          Length = 1452

 Score = 44.1 bits (22), Expect = 3e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 12 tcgggtcgaccccgcgtccgca 33
          ||||||||||||||||||||||
Sbjct: 13 tcgggtcgaccccgcgtccgca 34


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,165
Number of Sequences: 6905
Number of extensions: 13165
Number of successful extensions: 1491
Number of sequences better than 10.0: 189
length of query: 871
length of database: 5,674,871
effective HSP length: 16
effective length of query: 855
effective length of database: 5,564,391
effective search space: 4757554305
effective search space used: 4757554305
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 7. 5
Homology vs DNA 
Query= Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Contig-U04925-1Q.Seq.d
         (871 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU269381) Dictyostelium discoideum vegetative cDNA clone:VS...   710   0.0    2
(AU037587) Dictyostelium discoideum slug cDNA, clone SSD822.      692   0.0    2
(AU072244) Dictyostelium discoideum slug cDNA, clone SSD822.      313   3e-84  2
(BB973506) Plasmodium berghei str. ANKA cDNA clone: OK003288...    40   0.008  3
(AL121947) Human DNA sequence from clone RP3-383P5 on chromo...    54   0.009  1
(AC027112) Homo sapiens chromosome 8 clone RP11-646O24 map 8...    54   0.009  1
(AC022191) Homo sapiens clone RP11-21B6, WORKING DRAFT SEQUE...    54   0.009  1
(AG718641) Macaca fuscata fuscata DNA, clone: MSB2-168K10_F,...    54   0.009  1
(BB975106) Plasmodium berghei str. ANKA cDNA clone: OK004925...    52   0.036  1
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    52   0.036  1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    46   0.30   16
(EY680895) CS00-C1-650-016-A11-CT.F Sweet orange leaf, young...    38   0.46   2
(CV968364) PC061A11 infected tomato, center of lesion 3 dpi ...    46   0.48   2
(AM480502) Vitis vinifera contig VV78X073095.3, whole genome...    48   0.57   1
(AZ863692) 2M0171K20R Mouse 10kb plasmid UUGC1M library Mus ...    48   0.57   1
(EK281202) 1095462295981 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.57   1
(CV871352) PDUts1090D04 Porcine testis cDNA library I Sus sc...    48   0.57   1
(CT634769) Danio rerio EST, clone ZF_mu_108h17 5'.                 48   0.57   1
(CT618758) Danio rerio EST, clone ZF_mu_79m02 5'.                  48   0.57   1
(CF603050) BACCA01_000264 Grape Berry pSPORT1 Library Vitis ...    48   0.57   1
(EY672893) CS00-C1-102-088-E07-CT.F Sweet orange leaf, infec...    48   0.57   1
(DX539309) GH_MBb0028C10f GH_MBb Gossypium hirsutum genomic ...    46   0.66   2
(U15110) Mycoplasma capricolum ptsI-crr operon phosphocarrie...    46   0.69   2
(AC162404) Bos taurus clone CH240-115I9, WORKING DRAFT SEQUE...    34   0.83   5
(AC202471) Medicago truncatula clone mth2-150j20, WORKING DR...    44   0.92   5
(DN792025) 90208948 Sea Urchin primary mesenchyme cell cDNA ...    40   0.97   3
(CT639338) Danio rerio EST, clone ZF_mu_108h20 3'.                 38   1.1    2
(CU179655) Zebrafish DNA sequence from clone CH211-1J6.            34   1.2    2
(BX294119) Zebrafish DNA sequence from clone CH211-113D22 in...    44   1.2    6
(CT737185) Zebrafish DNA sequence from clone DKEY-267L4 in l...    34   1.2    2
(CJ353889) Molgula tectiformis cDNA, cleaving embryo clone:m...    42   1.3    2
(CT698295) Danio rerio EST, clone ZF_mu_175d13 5'.                 42   1.4    2
(DX522733) GH_MBb0087O10f GH_MBb Gossypium hirsutum genomic ...    42   1.4    2
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g...    34   1.6    16
(EY780438) CR05-C1-103-070-H04-CT.F Mandarin leaf, infected ...    40   1.8    2
(CT597815) Danio rerio EST, clone ZF_mu_81h21 5'.                  40   1.8    2
(EY795138) CR05-C3-701-023-H05-CT.F Mandarin fruit, developm...    40   1.8    2
(EY778410) CR05-C1-103-031-G06-CT.F Mandarin leaf, infected ...    44   1.8    2
(EY777348) CR05-C1-103-029-D08-CT.F Mandarin leaf, infected ...    38   1.8    2
(DN786146) 90167326 Sea Urchin primary mesenchyme cell cDNA ...    38   1.9    2
(DN792017) 90881534 Sea Urchin primary mesenchyme cell cDNA ...    40   1.9    2
(EF494740) Blastocystis sp. NandII mitochondrion, complete g...    34   2.0    5
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    36   2.2    14
(CR940308) M.truncatula DNA sequence from clone MTH2-17G23 o...    46   2.3    1
(AC216474) Populus trichocarpa clone POP081-J22, complete se...    46   2.3    1
(AC099340) Homo sapiens BAC clone RP11-214O14 from 4, comple...    46   2.3    1
(AC123001) Rattus norvegicus clone CH230-21L20, *** SEQUENCI...    46   2.3    1
(CU582768) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.3    1
(AC224344) Bos taurus clone CH240-488K3, WORKING DRAFT SEQUE...    46   2.3    1
(AC207937) Triticum aestivum clone TAACSPALLhA_1057G04, *** ...    46   2.3    1
(AC165573) Bos taurus clone CH240-173F8, WORKING DRAFT SEQUE...    46   2.3    1
(ER359511) 1092399300316 Global-Ocean-Sampling_GS-34-01-01-1...    46   2.3    1
(ER356381) 1092351127516 Global-Ocean-Sampling_GS-34-01-01-1...    46   2.3    1
(EK512999) 1095515486541 Global-Ocean-Sampling_GS-32-01-01-1...    46   2.3    1
(EK495025) 1095505154382 Global-Ocean-Sampling_GS-32-01-01-1...    46   2.3    1
(EJ346470) 1092963551409 Global-Ocean-Sampling_GS-28-01-01-1...    46   2.3    1
(EJ220931) 1092351230550 Global-Ocean-Sampling_GS-27-01-01-1...    46   2.3    1
(DU904552) 413054 Tomato HindIII BAC Library Solanum lycoper...    46   2.3    1
(CE485894) tigr-gss-dog-17000365526675 Dog Library Canis lup...    46   2.3    1
(CE420401) tigr-gss-dog-17000362734690 Dog Library Canis lup...    46   2.3    1
(EE731640) BeE60C09B02 BeE60C Blastocladiella emersonii cDNA...    46   2.3    1
(AU269337) Dictyostelium discoideum vegetative cDNA clone:VS...    46   2.3    1
(AU269176) Dictyostelium discoideum vegetative cDNA clone:VS...    46   2.3    1
(CX056831) PDUts2007A02 Porcine testis cDNA library II Sus s...    46   2.3    1
(CV432331) RT0512 Chinese cabbage root library Brassica rapa...    46   2.3    1
(CT736909) Danio rerio EST, clone ZF_mu_218h14 5'.                 46   2.3    1
(CT734298) Danio rerio EST, clone ZF_mu_216l03 3'.                 46   2.3    1
(CT733756) Danio rerio EST, clone ZF_mu_291g03 5'.                 46   2.3    1
(CT655381) Danio rerio EST, clone ZF_mu_182d17 3'.                 46   2.3    1
(CT644227) Danio rerio EST, clone ZF_mu_68d17 5'.                  46   2.3    1
(CT623111) Danio rerio EST, clone ZF_mu_108o04 3'.                 46   2.3    1
(CT618686) Danio rerio EST, clone ZF_mu_79c20 5'.                  46   2.3    1
(CT600725) Danio rerio EST, clone ZF_mu_90b05 3'.                  46   2.3    1
(CT597801) Danio rerio EST, clone ZF_mu_81h03 3'.                  46   2.3    1
(CO973465) BeG60N12E08 BeG60N Blastocladiella emersonii cDNA...    46   2.3    1
(CO970265) BeG120N18A01 BeG120N Blastocladiella emersonii cD...    46   2.3    1
(CK406072) AUF_IfSpn_236_d17 Ictalurus furcatus spleen cDNA ...    46   2.3    1
(CF580707) AGENCOURT_11361582_updated NIH_MGC_137 Mus muscul...    46   2.3    1
(CD203571) Ls_AM1_10F05_T7 Litomosoides sigmodontis adult ma...    46   2.3    1
(EY827090) PT11-C1-901-092-G10-CT.F Poncirus trifoliata leaf...    46   2.3    1
(EY824789) PT11-C1-901-067-A04-CT.F Poncirus trifoliata leaf...    46   2.3    1
(EY804777) CR05-C3-702-053-A05-CT.F Mandarin fruit, developm...    46   2.3    1
(EY773838) CR05-C1-102-095-H07-CT.F Mandarin leaf, infected ...    46   2.3    1
(EY773244) CR05-C1-102-072-A03-CT.F Mandarin leaf, infected ...    46   2.3    1
(EY678263) CS00-C1-401-046-C03-CT.F Sweet orange leaf, infec...    46   2.3    1
(EY671913) CS00-C1-102-090-A05-CT.F Sweet orange leaf, infec...    46   2.3    1
(EV164435) 0166467 Brassica napus Late bud Brassica napus cD...    46   2.3    1
(X78229) C.botulinum type B (ATCC 25765) nontoxic-nonhemaggl...    46   2.3    1
(CP001057) Clostridium botulinum B str. Eklund 17B plasmid p...    46   2.3    1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    46   2.3    1
(BB975360) Plasmodium berghei str. ANKA cDNA clone: OK005189...    38   3.4    2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    34   3.4    15
(BX005026) Zebrafish DNA sequence from clone DKEY-11J5.            42   3.5    3
(AM910993) Plasmodium knowlesi strain H chromosome 11, compl...    32   3.6    2
(DC234332) Plasmodium berghei strain ANKA cDNA clone:SG03009...    38   3.6    2
(BB973819) Plasmodium berghei str. ANKA cDNA clone: OK003606...    42   3.8    2
(BB973211) Plasmodium berghei str. ANKA cDNA clone: OK002982...    38   3.9    2
(BB975665) Plasmodium berghei str. ANKA cDNA clone: OK005508...    40   3.9    2
(AC108540) Rattus norvegicus clone CH230-110A20, *** SEQUENC...    40   4.1    7
(BB972861) Plasmodium berghei str. ANKA cDNA clone: OK002590...    40   4.2    2
(BB973097) Plasmodium berghei str. ANKA cDNA clone: OK002831...    38   4.2    2
(CT639326) Danio rerio EST, clone ZF_mu_108b18 3'.                 40   4.2    2
(DB763281) Apis mellifera head cDNA, RIKEN full-length enric...    32   4.3    3
(BB973581) Plasmodium berghei str. ANKA cDNA clone: OK003364...    40   4.3    2
(AC234019) Monodelphis domestica clone VMRC18-753P17, WORKIN...    42   4.4    3
(DC214637) Plasmodium berghei strain ANKA cDNA clone:MG01668...    38   4.9    2
(CJ351055) Molgula tectiformis cDNA, cleaving embryo clone:m...    40   5.1    2
(CV874903) PDUts1132F08 Porcine testis cDNA library I Sus sc...    38   5.7    2
(EK330470) 1095467022392 Global-Ocean-Sampling_GS-31-01-01-1...    36   5.9    2
(CT635252) Danio rerio EST, clone ZF_mu_104m12 3'.                 38   6.3    2
(CT632610) Danio rerio EST, clone ZF_mu_88j18 3'.                  40   6.3    2
(EY745780) CS00-C5-003-021-E01-CT.F Sweet orange flower, gre...    42   6.4    2
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6...    32   6.4    9
(EY815986) PT11-C1-900-069-B11-CT.F Poncirus trifoliata leaf...    40   6.5    2
(EY672381) CS00-C1-102-109-E01-CT.F Sweet orange leaf, infec...    42   6.5    2
(BZ393900) EINAC87TR EI_10_12_KB Entamoeba invadens genomic ...    40   6.6    2
(CT725082) Danio rerio EST, clone ZF_mu_210c03 5'.                 42   6.6    2
(EY800613) CR05-C3-701-099-A07-CT.F Mandarin fruit, developm...    42   6.6    2
(DN792152) 90880163 Sea Urchin primary mesenchyme cell cDNA ...    38   6.7    2
(EY790575) CR05-C3-700-122-A12-CT.F Mandarin fruit, developm...    42   6.7    2
(DN782081) 90187235 Sea Urchin primary mesenchyme cell cDNA ...    38   7.0    2
(EK305231) 1095462378946 Global-Ocean-Sampling_GS-31-01-01-1...    36   7.0    2
(EY863896) CM30-C1-401-057-B09-CT.F Sweet lime leaf, infecte...    40   7.1    2
(DN790819) 90160387 Sea Urchin primary mesenchyme cell cDNA ...    42   7.2    2
(AC179559) Strongylocentrotus purpuratus clone R3-1032D15, W...    38   7.2    5
(EY679050) CS00-C1-401-054-E09-CT.F Sweet orange leaf, infec...    38   7.3    2
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D...    34   7.6    19
(DN784189) 90150465 Sea Urchin primary mesenchyme cell cDNA ...    42   7.7    2
(FC755055) CBBI8456.fwd CBBI Lottia gigantea 26h,37h,61h Lar...    34   7.9    3
(CU915534) Zebrafish DNA sequence from clone CH73-149B22 in ...    42   8.4    3
(X06961) Aspergillus nidlans mitochondrial DNA for L-rRNA.         38   8.5    2
(CR391909) Zebrafish DNA sequence from clone DKEY-201N22 in ...    44   8.9    1
(BX927368) Zebrafish DNA sequence from clone CH211-15J16 in ...    44   8.9    1
(BX296551) Zebrafish DNA sequence from clone CH211-224L10 in...    44   8.9    1
(AJ585131) Bluetongue virus 10 VP2 gene, isolate South Afric...    44   8.9    1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    44   8.9    1
(BV775902) pRRL2:Newb:20080411:15382 USMARC Pig Breed SNP Di...    44   8.9    1
(AL773580) Mouse DNA sequence from clone RP23-26G3 on chromo...    44   8.9    1
(AC159998) Mus musculus BAC clone RP24-576J22 from chromosom...    44   8.9    1
(AC153645) Mus musculus BAC clone RP24-534E8 from chromosome...    44   8.9    1
(AC135667) Mus musculus BAC clone RP24-536G18 from chromosom...    44   8.9    1
(AC116871) Mus musculus chromosome 19, clone RP24-417P12, co...    44   8.9    1
(EF064251) Blastocladiella emersonii cob(I)alamin adenosyltr...    44   8.9    1
(AL133449) Human chromosome 14 DNA sequence BAC R-111J13 of ...    44   8.9    1
(AC096540) Homo sapiens chromosome 1 clone RP11-223A3, compl...    44   8.9    1
(AC153211) Bos taurus clone CH240-28B8, WORKING DRAFT SEQUEN...    44   8.9    1
(AC152710) Bos taurus clone CH240-7F4, WORKING DRAFT SEQUENC...    44   8.9    1
(AC151443) Atelerix albiventris clone LB4-328E3, WORKING DRA...    44   8.9    1
(AC148811) Canis lupus familiaris clone RP81-314M16, WORKING...    44   8.9    1
(FP236242) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    44   8.9    1
(FP102077) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.9    1
(CU633830) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.9    1
(CU633379) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   8.9    1
(AC232517) Brassica rapa subsp. pekinensis clone KBrB070K15,...    44   8.9    1
(AC189250) Brassica rapa subsp. pekinensis clone KBrB019B16,...    44   8.9    1
(AC171225) Bos taurus clone CH240-277P20, WORKING DRAFT SEQU...    44   8.9    1
(AZ504278) 1M0344H24F Mouse 10kb plasmid UUGC1M library Mus ...    44   8.9    1
(AQ817466) HS_5264_B1_B09_SP6E RPCI-11 Human Male BAC Librar...    44   8.9    1
(FH238844) CHO_OF3445xm02r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   8.9    1
(ER461467) 1092963897351 Global-Ocean-Sampling_GS-35-01-01-1...    44   8.9    1
(EK301750) 1095462367055 Global-Ocean-Sampling_GS-31-01-01-1...    44   8.9    1
(EK204776) 1095460069851 Global-Ocean-Sampling_GS-31-01-01-1...    44   8.9    1
(EJ581810) 1092960176308 Global-Ocean-Sampling_GS-29-01-01-1...    44   8.9    1
(EJ536559) 1092955262366 Global-Ocean-Sampling_GS-29-01-01-1...    44   8.9    1
(EJ194426) 1092344224296 Global-Ocean-Sampling_GS-27-01-01-1...    44   8.9    1
(EJ191691) 1092344204144 Global-Ocean-Sampling_GS-27-01-01-1...    44   8.9    1
(EJ163214) 1092344056401 Global-Ocean-Sampling_GS-27-01-01-1...    44   8.9    1
(EI319120) GM_WBc0053J08.f GM_WBc Glycine max genomic clone ...    44   8.9    1
(CL706855) OR_BBa0024J14.r OR_BBa Oryza nivara genomic clone...    44   8.9    1
(BZ399766) EINDS30TF EI_10_12_KB Entamoeba invadens genomic ...    44   8.9    1
(ES277776) PQ028A01.XT7 non-sporulating culture of P. brassi...    44   8.9    1
(EE735234) BeE90D16H11 BeE90D Blastocladiella emersonii cDNA...    44   8.9    1
(EE732176) BeE60C17C12 BeE60C Blastocladiella emersonii cDNA...    44   8.9    1
(EE731775) BeE60C12A12 BeE60C Blastocladiella emersonii cDNA...    44   8.9    1
(EE730973) BeE60C29B10 BeE60C Blastocladiella emersonii cDNA...    44   8.9    1
(EE730969) BeE60C29C04 BeE60C Blastocladiella emersonii cDNA...    44   8.9    1
(DW678986) EST002467 Trichophyton rubrum cDNA library 0 Tric...    44   8.9    1
(DW678891) EST002372 Trichophyton rubrum cDNA library 0 Tric...    44   8.9    1
(DW678671) EST002152 Trichophyton rubrum cDNA library 0 Tric...    44   8.9    1
(DW405679) EST000100 Trichophyton rubrum cDNA library Tricho...    44   8.9    1
(DW405633) EST000054 Trichophyton rubrum cDNA library Tricho...    44   8.9    1
(AU268940) Dictyostelium discoideum vegetative cDNA clone:VS...    44   8.9    1
(AU266788) Dictyostelium discoideum vegetative cDNA clone:VS...    44   8.9    1
(AU266778) Dictyostelium discoideum vegetative cDNA clone:VS...    44   8.9    1
(AU266151) Dictyostelium discoideum vegetative cDNA clone:VS...    44   8.9    1
(DN792136) 90920693 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN791666) 90162088 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN791310) 90880516 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN790952) 90178363 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN790859) 90881407 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN789210) 90885725 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN788286) 93935117 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN788222) 90879892 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN785227) 90895419 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN784177) 90193340 Sea Urchin primary mesenchyme cell cDNA ...    44   8.9    1
(DN557161) Ls_af1_11f02_T7 Litomosoides sigmodontis adult fe...    44   8.9    1
(CX918736) JGI_CAAN6845.fwd NIH_XGC_tropTe4 Xenopus (Siluran...    44   8.9    1
(CX057564) PDUts2015A03 Porcine testis cDNA library II Sus s...    44   8.9    1
(CV961417) PYrpcy_3896 mycelium, Plich medium Phytophthora i...    44   8.9    1
(CV877261) PDUts1162C04 Porcine testis cDNA library I Sus sc...    44   8.9    1
(CV864612) PDUts1007H09 Porcine testis cDNA library I Sus sc...    44   8.9    1
(CV432542) RT0877 Chinese cabbage root library Brassica rapa...    44   8.9    1
(CV432516) RT0836 Chinese cabbage root library Brassica rapa...    44   8.9    1
(CV432118) RT0083 Chinese cabbage root library Brassica rapa...    44   8.9    1
(CT729175) Danio rerio EST, clone ZF_mu_262h09 3'.                 44   8.9    1
(CT699741) Danio rerio EST, clone ZF_mu_284k09 3'.                 44   8.9    1
(CT692581) Danio rerio EST, clone ZF_mu_220j22 5'.                 44   8.9    1
(CT687775) Danio rerio EST, clone ZF_mu_234o15 5'.                 44   8.9    1
(CT683267) Danio rerio EST, clone ZF_mu_290n19 3'.                 44   8.9    1
(CT681453) Danio rerio EST, clone ZF_mu_146d14 3'.                 44   8.9    1
(CT676469) Danio rerio EST, clone ZF_mu_155k06 3'.                 44   8.9    1
(CT669653) Danio rerio EST, clone ZF_mu_142a09 3'.                 44   8.9    1
(CT665452) Danio rerio EST, clone ZF_mu_130n21 5'.                 44   8.9    1
(CT650791) Danio rerio EST, clone ZF_mu_130p09 3'.                 44   8.9    1
(CT642405) Danio rerio EST, clone ZF_mu_108o14 5'.                 44   8.9    1
(CT641509) Danio rerio EST, clone ZF_mu_74k17 3'.                  44   8.9    1
(CT638629) Danio rerio EST, clone ZF_mu_86j03 5'.                  44   8.9    1
(CT638601) Danio rerio EST, clone ZF_mu_86f17 3'.                  44   8.9    1
(CT635394) Danio rerio EST, clone ZF_mu_63m20 3'.                  44   8.9    1
(CT633475) Danio rerio EST, clone ZF_mu_65n11 5'.                  44   8.9    1
(CT633155) Danio rerio EST, clone ZF_mu_74f16 5'.                  44   8.9    1
(CT631060) Danio rerio EST, clone ZF_mu_108g09 5'.                 44   8.9    1
(CT629163) Danio rerio EST, clone ZF_mu_79m16 5'.                  44   8.9    1
(CT626305) Danio rerio EST, clone ZF_mu_67k01 5'.                  44   8.9    1
(CT622484) Danio rerio EST, clone ZF_mu_84g18 3'.                  44   8.9    1
(CT620062) Danio rerio EST, clone ZF_mu_77f23 5'.                  44   8.9    1
(CT615034) Danio rerio EST, clone ZF_mu_77g17 5'.                  44   8.9    1
(CT613238) Danio rerio EST, clone ZF_mu_77f04 3'.                  44   8.9    1
(CT610541) Danio rerio EST, clone ZF_mu_143f22 3'.                 44   8.9    1
(CT604568) Danio rerio EST, clone ZF_mu_176e17 5'.                 44   8.9    1
(CT599419) Danio rerio EST, clone ZF_mu_89e03 5'.                  44   8.9    1
(CT597797) Danio rerio EST, clone ZF_mu_81f23 5'.                  44   8.9    1
(CT596682) Danio rerio EST, clone ZF_mu_85j05 3'.                  44   8.9    1
(CT596137) Danio rerio EST, clone ZF_mu_81b20 3'.                  44   8.9    1
(CO975395) BeG90N15H11 BeG90N Blastocladiella emersonii cDNA...    44   8.9    1
(CO970770) BeG120N24F11 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO970591) BeG120N22D09 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO970206) BeG120N17C05 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO970114) BeG120N16B07 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO970113) BeG120N16B06 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO969829) BeG120N12C12 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO969641) BeG120N09F01 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO969523) BeG120N07H09 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO969488) BeG120N07D12 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO969401) BeG120N06C04 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO969362) BeG120N05G02 BeG120N Blastocladiella emersonii cD...    44   8.9    1
(CO967946) BeE90N14D10 BeE90N Blastocladiella emersonii cDNA...    44   8.9    1
(CO967485) BeE90N09B05 BeE90N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964779) BeE30N21E01 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964575) BeE30N19B04 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964453) BeE30N17G10 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964451) BeE30N17G07 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964369) BeE30N16H04 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964234) BeE30N15D06 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO964102) BeE30N13H06 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963856) BeE30N10B02 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963756) BeE30N08H09 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963707) BeE30N08D05 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963682) BeE30N08B03 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963629) BeE30N07E06 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963626) BeE30N07E03 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO963595) BeE30N07B07 BeE30N Blastocladiella emersonii cDNA...    44   8.9    1
(CO440304) MZCCL10018F08.g Maize Endosperm cDNA Library Zea ...    44   8.9    1
(CN651522) Eg_PSSLS_09F04_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651506) Eg_PSSLS_09D08_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651450) Eg_PSSLS_08E07_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651437) Eg_PSSLS_08C10_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651430) Eg_PSSLS_08B09_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651388) Eg_PSSLS_07E07_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651382) Eg_PSSLS_07E01_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651359) Eg_PSSLS_07B05_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651281) Eg_PSSLS_06A11_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651280) Eg_PSSLS_06A10_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651258) Eg_PSSLS_05G07_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651199) Eg_PSSLS_04H02_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651174) Eg_PSSLS_04D12_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651114) Eg_PSSLS_03E01_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651091) Eg_PSSLS_03B06_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN651083) Eg_PSSLS_03A07_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN650993) Eg_PSSLS_10H02_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN650980) Eg_PSSLS_10F07_T7 Echinococcus granulosus protosc...    44   8.9    1
(CN650971) Eg_PSSLS_10E01_T7 Echinococcus granulosus protosc...    44   8.9    1
(CK406108) AUF_IfSpn_236_f11 Ictalurus furcatus spleen cDNA ...    44   8.9    1
(CJ975925) Bursaphelenchus mucronatus cDNA clone: Bm_U1_02G0...    44   8.9    1
(CJ371524) Molgula tectiformis cDNA, gastrula/neurula clone:...    44   8.9    1
(CJ370433) Molgula tectiformis cDNA, gastrula/neurula clone:...    44   8.9    1
(CJ352068) Molgula tectiformis cDNA, cleaving embryo clone:m...    44   8.9    1
(CJ350878) Molgula tectiformis cDNA, cleaving embryo clone:m...    44   8.9    1
(CJ350766) Molgula tectiformis cDNA, cleaving embryo clone:m...    44   8.9    1
(AJ776404) Populus euphratica EST, clone P0000400012F12F1.         44   8.9    1
(AJ703129) Zantedeschia aethiopica EST, clone K-8-7.               44   8.9    1
(AJ703048) Zantedeschia aethiopica EST, clone L-24-6.              44   8.9    1
(CF873160) tric004xj19.b11 T.reesei mycelial culture, Versio...    44   8.9    1
(CF605224) RADIC01_000830 Grape Root pSPORT1 Library Vitis v...    44   8.9    1
(CF604375) BACCA01_001739 Grape Berry pSPORT1 Library Vitis ...    44   8.9    1
(CF603992) BACCA01_001311 Grape Berry pSPORT1 Library Vitis ...    44   8.9    1
(BY915531) Bombyx mori cDNA, clone:E_ET_maV3_01B08_F_1, 5' e...    44   8.9    1
(BY915530) Bombyx mori cDNA, clone:E_ET_maV3_01B07_F_1, 5' e...    44   8.9    1
(BP179062) Bombyx mori cDNA, clone: maV32145, 5' end sequence.     44   8.9    1
(BM773887) ra87a08.y1 Meloidogyne incognita egg pAMP1 Bird M...    44   8.9    1
(BB975230) Plasmodium berghei str. ANKA cDNA clone: OK005053...    44   8.9    1
(BB975037) Plasmodium berghei str. ANKA cDNA clone: OK004855...    44   8.9    1
(BB973959) Plasmodium berghei str. ANKA cDNA clone: OK003748...    44   8.9    1
(BB973736) Plasmodium berghei str. ANKA cDNA clone: OK003521...    44   8.9    1
(BB972980) Plasmodium berghei str. ANKA cDNA clone: OK002712...    44   8.9    1
(FC834552) CBHI5644.fwd CBHI Metridium senile tentacle Metri...    44   8.9    1
(FC827204) CBHI1576.fwd CBHI Metridium senile tentacle Metri...    44   8.9    1
(EY891787) TS27-C2-300-094-C02-CT.F Sunki mandarin bark, gre...    44   8.9    1
(EY889149) TS27-C2-300-056-F01-CT.F Sunki mandarin bark, gre...    44   8.9    1
(EY883675) LT33-C1-003-087-B04-CT.F Tahiti lime leaf, greenh...    44   8.9    1
(EY845952) CA26-C1-002-048-C09-CT.F Sour orange leaf, field ...    44   8.9    1
(EY835603) PT11-C2-301-042-E05-CT.F Poncirus trifoliata bark...    44   8.9    1
(EY832336) PT11-C2-300-086-G03-CT.F Poncirus trifoliata bark...    44   8.9    1
(EY830787) PT11-C2-300-068-G06-CT.F Poncirus trifoliata bark...    44   8.9    1
(EY829310) PT11-C2-300-022-E06-CT.F Poncirus trifoliata bark...    44   8.9    1
(EY829296) PT11-C2-300-022-D01-CT.F Poncirus trifoliata bark...    44   8.9    1
(EY824070) PT11-C1-901-060-A01-CT.F Poncirus trifoliata leaf...    44   8.9    1
(EY815969) PT11-C1-900-069-A03-CT.F Poncirus trifoliata leaf...    44   8.9    1
(EY814892) PT11-C1-900-054-G01-CT.F Poncirus trifoliata leaf...    44   8.9    1
(EY799328) CR05-C3-701-087-F05-CT.F Mandarin fruit, developm...    44   8.9    1
(EY799249) CR05-C3-701-059-G05-CT.F Mandarin fruit, developm...    44   8.9    1
(EY798941) CR05-C3-701-070-E05-CT.F Mandarin fruit, developm...    44   8.9    1
(EY798873) CR05-C3-701-069-F04-CT.F Mandarin fruit, developm...    44   8.9    1
(EY798218) CR05-C3-701-064-C03-CT.F Mandarin fruit, developm...    44   8.9    1
(EY797821) CR05-C3-701-056-G04-CT.F Mandarin fruit, developm...    44   8.9    1
(EY797290) CR05-C3-701-050-H01-CT.F Mandarin fruit, developm...    44   8.9    1
(EY797274) CR05-C3-701-050-F08-CT.F Mandarin fruit, developm...    44   8.9    1
(EY797049) CR05-C3-701-048-B09-CT.F Mandarin fruit, developm...    44   8.9    1
(EY796848) CR05-C3-701-045-H10-CT.F Mandarin fruit, developm...    44   8.9    1
(EY791937) CR05-C3-700-137-G02-CT.F Mandarin fruit, developm...    44   8.9    1
(EY782046) CR05-C1-103-085-D02-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY781616) CR05-C1-103-083-C11-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY781086) CR05-C1-103-074-C04-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY780090) CR05-C1-103-063-G11-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY779499) CR05-C1-103-052-C02-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY777935) CR05-C1-103-038-H07-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY777574) CR05-C1-103-036-G01-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY776358) CR05-C1-103-010-A09-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY775318) CR05-C1-103-008-G04-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY775255) CR05-C1-103-008-A05-CT.F Mandarin leaf, infected ...    44   8.9    1
(EY751054) CS00-C5-003-103-B11-CT.F Sweet orange flower, gre...    44   8.9    1
(EY747859) CS00-C5-003-049-F12-CT.F Sweet orange flower, gre...    44   8.9    1
(EY746226) CS00-C5-003-029-E02-CT.F Sweet orange flower, gre...    44   8.9    1
(EY743516) CS00-C3-705-105-D08-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY728156) CS00-C3-703-108-C02-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY712489) CS00-C3-702-019-H09-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY710713) CS00-C3-701-086-D02-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY710358) CS00-C3-701-097-H07-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY709143) CS00-C3-701-106-G02-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY702087) CS00-C3-700-110-H07-CT.F Sweet orange fruit, deve...    44   8.9    1
(EY670640) CS00-C1-102-064-F09-CT.F Sweet orange leaf, infec...    44   8.9    1
(EY669656) CS00-C1-102-050-G02-CT.F Sweet orange leaf, infec...    44   8.9    1
(EY667101) CS00-C1-102-028-B08-CT.F Sweet orange leaf, infec...    44   8.9    1
(EY667085) CS00-C1-102-028-A01-CT.F Sweet orange leaf, infec...    44   8.9    1
(EY665942) CS00-C1-102-007-F06-CT.F Sweet orange leaf, infec...    44   8.9    1
(EY658792) CS00-C1-100-067-E01-CT.F Sweet orange leaf, green...    44   8.9    1
(EY658594) CS00-C1-100-129-B09-CT.F Sweet orange leaf, green...    44   8.9    1
(EY658465) CS00-C1-100-139-F12-CT.F Sweet orange leaf, green...    44   8.9    1
(EV227580) 0109506 Brassica napus Damaged cotyledons Brassic...    44   8.9    1
(EV226035) 0107961 Brassica napus Damaged cotyledons Brassic...    44   8.9    1
(EV225165) 0107091 Brassica napus Damaged cotyledons Brassic...    44   8.9    1
(EV193702) 0091187 Brassica napus Cold acclimation - dark Br...    44   8.9    1
(EV189689) 0087170 Brassica napus Cold acclimation - dark Br...    44   8.9    1
(EV112344) 0117656 Brassica napus Senescent leaves Brassica ...    44   8.9    1
(EV107179) 0112491 Brassica napus Senescent leaves Brassica ...    44   8.9    1
(EV095381) 0193382 Brassica napus Apical meristem Brassica n...    44   8.9    1
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    44   8.9    1
(CP000903) Bacillus weihenstephanensis KBAB4, complete genome.     44   8.9    1
(CP000485) Bacillus thuringiensis str. Al Hakam, complete ge...    44   8.9    1
(CP000312) Clostridium perfringens SM101, complete genome.         44   8.9    1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    44   8.9    1
(AC182194) Bos taurus clone CH240-488E23, WORKING DRAFT SEQU...    40   9.6    4

>(AU269381) Dictyostelium discoideum vegetative cDNA clone:VSI880,
           5' end single read.
          Length = 455

 Score =  710 bits (358), Expect(2) = 0.0
 Identities = 358/358 (100%)
 Strand = Plus / Plus


Query: 98  gatggcgcaaaagaattaacaccattcatttatggtgatagaattagtatggaatgtaaa 157
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  gatggcgcaaaagaattaacaccattcatttatggtgatagaattagtatggaatgtaaa 157


Query: 158 gataacgaagggaattggaaattaggtccaatttgtttaaatcaaaaacaagaacttagt 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gataacgaagggaattggaaattaggtccaatttgtttaaatcaaaaacaagaacttagt 217


Query: 218 gtatattatggcagagatgcaccactttattgtggaatttatatagatgaaaaagaactt 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtatattatggcagagatgcaccactttattgtggaatttatatagatgaaaaagaactt 277


Query: 278 aatagaattaaagatgtattaaatagaaattcatcatgggaatgtagaataccaatatca 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aatagaattaaagatgtattaaatagaaattcatcatgggaatgtagaataccaatatca 337


Query: 338 tcagaaagtaatactgatgatatttatataccactttcaattcaattatggggatatcct 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tcagaaagtaatactgatgatatttatataccactttcaattcaattatggggatatcct 397


Query: 398 caagatgatcatttagatattacaactcactataattttatatttcatgttgaaaaag 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caagatgatcatttagatattacaactcactataattttatatttcatgttgaaaaag 455

 Score = 79.8 bits (40), Expect(2) = 0.0
 Identities = 40/40 (100%)
 Strand = Plus / Plus


Query: 12 tcgggtcgaccccgcgtccgcactaaatgatgaacttcaa 51
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tcgggtcgaccccgcgtccgcactaaatgatgaacttcaa 51

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 866,360,220
Number of extensions: 54347275
Number of successful extensions: 4726920
Number of sequences better than 10.0: 374
Length of query: 871
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 847
Effective length of database: 99,340,224,878
Effective search space: 84141170471666
Effective search space used: 84141170471666
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.31
Homology vs Protein 
Query= Contig-U04925-1 (Contig-U04925-1Q) /CSM_Contig/Contig-U04925-1Q.Seq.d
         (871 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR382132_599(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...    57   8e-07
CR382139_616(CR382139|pid:none) Debaryomyces hansenii strain CBS...    51   4e-05
CU633897_336(CU633897|pid:none) Podospora anserina genomic DNA c...    42   0.027
FM992688_1005(FM992688|pid:none) Candida dubliniensis CD36 chrom...    41   0.060
(Q3BAK5) RecName: Full=DNA-directed RNA polymerase subunit alpha...    37   1.1
AE014187_243(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.5
AC023913_6(AC023913|pid:none) Arabidopsis thaliana chromosome 1 ...    35   3.3
(Q9C8N7) RecName: Full=Auxin response factor 22;  &AY669796_1(AY...    35   4.3
AC023913_8(AC023913|pid:none) Arabidopsis thaliana chromosome 1 ...    35   4.3
CP000717_3463(CP000717|pid:none) Mycobacterium tuberculosis F11,...    34   5.7
AE001437_2960(AE001437|pid:none) Clostridium acetobutylicum ATCC...    34   5.7
CP001147_466(CP001147|pid:none) Thermodesulfovibrio yellowstonii...    34   7.4
AL034559_20(AL034559|pid:none) Plasmodium falciparum MAL3P7, com...    34   7.4
CT005254_6(CT005254|pid:none) Leishmania major strain Friedlin, ...    33   9.6
CP001656_3551(CP001656|pid:none) Paenibacillus sp. JDR-2, comple...    33   9.6
AC023279_26(AC023279|pid:none) Genomic sequence for Arabidopsis ...    33   9.6

>CR382132_599(CR382132|pid:none) Yarrowia lipolytica strain CLIB122
           chromosome F complete sequence.
          Length = 268

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 45/227 (19%), Positives = 98/227 (43%), Gaps = 21/227 (9%)
 Frame = +2

Query: 101 GAKELTPFIYGDRISMEC--------------KDNEGNWKLGPICLNQKQELSVYYGRDA 238
           G  +L P+  GD + +EC              K  E  ++  PIC    + LS+ Y  D
Sbjct: 23  GETDLNPYSIGDDLPLECIKRNIHDGEHMVDEKTQEILYEDFPICRETGKPLSLQYRVDQ 82

Query: 239 PLYCGIYIDEKELNRIKDVLNRNSSWECRIPISSESNTDDI-----YIPLSIQLWGYPQD 403
            + C I   +   +  +  ++ ++ + CR+  S + N + +     ++PL+  + G+ Q+
Sbjct: 83  DVNCTIGFSDTLYHLFQLYIHEDAPFSCRLRASKQKNKNVLSEPTTWLPLTFTIRGHIQE 142

Query: 404 DHLDITTHYN--FIFHVEKGIIIGATLYPVKDKFQDVRKGAVFTIHGAIKWFNGGSHVEL 577
            HLDI    N   ++  +    + A  +    + +  + G    +  ++KW+ G ++ E+
Sbjct: 143 SHLDIDPKLNAVMMYSRKTETPVVAAAFSRGTETERYKNGDFLPLQLSVKWYPGSNNNEV 202

Query: 578 NDSLKLIKDNTNDFLNNLDYWIVILWIVLSMXTSLILFSLIYKYKLK 718
             +L    D+ + F +    W     I  +   +++   +I+  KL+
Sbjct: 203 -FTLPANPDSNSAFSSTTLMWCAATMIATAAIVTVVFQGVIFPRKLR 248

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,125,648,845
Number of extensions: 21048362
Number of successful extensions: 63490
Number of sequences better than 10.0: 16
Number of HSP's gapped: 63433
Number of HSP's successfully gapped: 16
Length of query: 290
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 163
Effective length of database: 646,092,785
Effective search space: 105313123955
Effective search space used: 105313123955
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 1.00  gvh: 0.58  alm: 0.21  top: 0.33  tms: 0.13  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 1.00  m3b: 0.00  m_ : 0.00 

	 40.0 %: endoplasmic reticulum
	 20.0 %: mitochondrial
	 12.0 %: plasma membrane
	  8.0 %: extracellular, including cell wall
	  4.0 %: Golgi
	  4.0 %: vacuolar
	  4.0 %: nuclear
	  4.0 %: vesicles of secretory system
	  4.0 %: cytoplasmic

>> prediction for Contig-U04925-1 is end
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0