>Contig-U04919-1 (Contig-U04919-1Q) /CSM_Contig/Contig-U04919-1Q.Seq.d
AACACAATGAAATAAAAAAAAAAAAAAAATCTAGTTTGTTAAATCACAAA
ATAAATGTTAATATTATCTTAAATCTGAATGGTCCATTTAGATAAAAAAG
GATTATTTCAAGGATAGGAAATCAAAAATTAAAAAAAACAAAAAAAAAGA
AAAAATTAAAAATAAATAAAATTCAATCAATATATAACAAAAATATTCAT
TGTTTCAAAACAAAATAATTAATTTTTATAAAATAAATAAATGTAAAAAT
CATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATGGA
AGTATTTCAATAAAATTATTATAATAAAATGTAAAAAAAAA

est1=SSH285F,1,247
est2=SSD796E,34,342
est3=VSI525F,57,264

hneikkkkkssllnhkinvniilnlngpfr*KRIISRIGNQKLKKTKKKKKLKINKIQSI
YNKNIHCFKTK*lifik*invkiikkkkkkkkkkkkkrwkyfnkiiiikckkk

Frame A:
ntmk*kkkknlvc*itk*mlils*i*mvhldkkglfqg*eikn*kkqkkrkn*k*ikfnq
yitkifivskqnn*fl*nk*m*kslkkkkkkkkkkkkkdgsisikll**nvkk


Frame B:
tq*nkkkkki*fvksqnkc*yylksewsi*ikkdyfkdrkskikknkkkekiknk*nsin
i*qkyslfqnkiinfykinkcknh*kkkkkkkkkkkkkmevfq*nyynkm*kk


Frame C:
hneikkkkkssllnhkinvniilnlngpfr*KRIISRIGNQKLKKTKKKKKLKINKIQSI
YNKNIHCFKTK*lifik*invkiikkkkkkkkkkkkkrwkyfnkiiiikckkk

Query= Contig-U04919-1 (Contig-U04919-1Q)
/CSM_Contig/Contig-U04919-1Q.Seq.d
         (341 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04919-1 (Contig-U04919-1Q) /CSM_Contig/Conti...   186  1e-47
Contig-U05658-1 (Contig-U05658-1Q) /CSM_Contig/Conti...    38  0.006
Contig-U14190-1 (Contig-U14190-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U13958-1 (Contig-U13958-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U13037-1 (Contig-U13037-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U11536-1 (Contig-U11536-1Q) /CSM_Contig/Conti...    36  0.023
Contig-U13219-1 (Contig-U13219-1Q) /CSM_Contig/Conti...    34  0.092
Contig-U11369-1 (Contig-U11369-1Q) /CSM_Contig/Conti...    34  0.092
Contig-U09699-1 (Contig-U09699-1Q) /CSM_Contig/Conti...    34  0.092
Contig-U08120-1 (Contig-U08120-1Q) /CSM_Contig/Conti...    34  0.092

>Contig-U04919-1 (Contig-U04919-1Q) /CSM_Contig/Contig-U04919-1Q.Seq.d
          Length = 341

 Score =  186 bits (94), Expect = 1e-47
 Identities = 94/94 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  tctagtttgttaaatcacaaaataaatgttaatattatcttaaatctgaatggtccattt 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  tctagtttgttaaatcacaaaataaatgttaatattatcttaaatctgaatggtccattt 89

                                             
Query: 90  agataaaaaaggattatttcaaggataggaaatc 123
           ||||||||||||||||||||||||||||||||||
Sbjct: 90  agataaaaaaggattatttcaaggataggaaatc 123


 Score = 75.8 bits (38), Expect = 3e-14
 Identities = 38/38 (100%)
 Strand = Plus / Plus

                                                 
Query: 295 gatggaagtatttcaataaaattattataataaaatgt 332
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gatggaagtatttcaataaaattattataataaaatgt 332


>Contig-U05658-1 (Contig-U05658-1Q) /CSM_Contig/Contig-U05658-1Q.Seq.d
          Length = 241

 Score = 38.2 bits (19), Expect = 0.006
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 309 aataaaattattataataa 327
           |||||||||||||||||||
Sbjct: 220 aataaaattattataataa 238


>Contig-U14190-1 (Contig-U14190-1Q) /CSM_Contig/Contig-U14190-1Q.Seq.d
          Length = 1316

 Score = 36.2 bits (18), Expect = 0.023
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 310 ataaaattattataataa 327
           ||||||||||||||||||
Sbjct: 42  ataaaattattataataa 25


 Score = 30.2 bits (15), Expect = 1.4
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 309 aataaaattattataataa 327
           |||| ||||||||||||||
Sbjct: 18  aatataattattataataa 36


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3276
Number of Sequences: 6905
Number of extensions: 3276
Number of successful extensions: 422
Number of sequences better than 10.0: 159
length of query: 341
length of database: 5,674,871
effective HSP length: 15
effective length of query: 326
effective length of database: 5,571,296
effective search space: 1816242496
effective search space used: 1816242496
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)

Query= Contig-U04919-1 (Contig-U04919-1Q) /CSM_Contig/Contig-U04919-1Q.Seq.d
         (341 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU037569) Dictyostelium discoideum slug cDNA, clone SSD796.      163   1e-51  2
(AU073467) Dictyostelium discoideum slug cDNA, clone SSH285.      186   4e-44  2
(AU268828) Dictyostelium discoideum vegetative cDNA clone:VS...   133   5e-27  1
(AU268829) Dictyostelium discoideum vegetative cDNA clone:VS...   105   1e-18  1
(CU468264) M.truncatula DNA sequence from clone MTH2-46F7 on...    50   0.054  1
(AC018361) Homo sapiens 3 BAC RP11-41O13 (Roswell Park Cance...    50   0.054  1
(FG082665) UI-FF-IH0-abb-b-07-0-UI.r1 Ceratitis capitata adu...    48   0.21   1
(AP006428) Lotus japonicus genomic DNA, chromosome 5, clone:...    46   0.85   1
(AC108201) Homo sapiens BAC clone RP11-18M21 from 4, complet...    46   0.85   1
(AC106880) Homo sapiens BAC clone RP11-709E23 from 4, comple...    46   0.85   1
(FP103074) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   0.85   1
(AP007785) Lotus japonicus genomic DNA, chromosome 4, clone:...    46   0.85   1
(AC234839) Homo sapiens chromosome UNKNOWN clone ABC7-424214...    46   0.85   1
(EI318847) GM_WBc0053D07.f GM_WBc Glycine max genomic clone ...    36   0.99   2
(AC179931) Strongylocentrotus purpuratus clone R3-23G13, WOR...    38   1.5    2
(CU928371) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   1.7    4
(Z83124) Caenorhabditis elegans DNA *** SEQUENCING IN PROGRE...    36   2.1    4
(AC009594) Homo sapiens chromosome 4 clone RP11-363G1 map 4,...    38   2.2    2
(BX324156) Zebrafish DNA sequence from clone CH211-215C3 in ...    38   2.9    2
(BX928740) Zebrafish DNA sequence from clone CH211-245J22 in...    36   3.0    3
(CZ869919) OC__Ba0267M13.r OC__Ba Oryza coarctata genomic cl...    34   3.0    2
(AC158008) Bos taurus clone CH240-190D17, WORKING DRAFT SEQU...    40   3.1    2
(AL928708) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    36   3.1    4
(AL844887) Zebrafish DNA sequence from clone DKEY-66C10.           42   3.3    2
(CU467094) Zebrafish DNA sequence from clone CH73-303F17 in ...    44   3.3    1
(AC141640) Mus musculus BAC clone RP23-319E4 from chromosome...    44   3.3    1
(AC188111) Pongo abelii chromosome UNK clone CH276-78H12, co...    44   3.3    1
(AY427938) Aphidius ervi isolate WAWH9 cytochrome oxidase su...    44   3.3    1
(AY427937) Aphidius ervi isolate WAWH6 cytochrome oxidase su...    44   3.3    1
(AY427936) Aphidius ervi isolate WAWH5 cytochrome oxidase su...    44   3.3    1
(AY427935) Aphidius ervi isolate WAWH4 cytochrome oxidase su...    44   3.3    1
(AY427934) Aphidius ervi isolate WAWH3 cytochrome oxidase su...    44   3.3    1
(AY427933) Aphidius ervi isolate WAP3 cytochrome oxidase sub...    44   3.3    1
(AY427932) Aphidius ervi isolate WAP2 cytochrome oxidase sub...    44   3.3    1
(AY427931) Aphidius ervi isolate WAO3 cytochrome oxidase sub...    44   3.3    1
(AY427930) Aphidius ervi isolate WAO2 cytochrome oxidase sub...    44   3.3    1
(AY427929) Aphidius ervi isolate WAML4 cytochrome oxidase su...    44   3.3    1
(AY427928) Aphidius ervi isolate WAML3 cytochrome oxidase su...    44   3.3    1
(AY427927) Aphidius ervi isolate WAML2 cytochrome oxidase su...    44   3.3    1
(AY427926) Aphidius ervi isolate WAML1 cytochrome oxidase su...    44   3.3    1
(AY427925) Aphidius ervi isolate UK5 cytochrome oxidase subu...    44   3.3    1
(AY427924) Aphidius ervi isolate Turkey10 cytochrome oxidase...    44   3.3    1
(AY427923) Aphidius ervi isolate ORW1 cytochrome oxidase sub...    44   3.3    1
(AY427922) Aphidius ervi isolate ORM5 cytochrome oxidase sub...    44   3.3    1
(AY427921) Aphidius ervi isolate ORM4 cytochrome oxidase sub...    44   3.3    1
(AY427920) Aphidius ervi isolate ORM3 cytochrome oxidase sub...    44   3.3    1
(AY427919) Aphidius ervi isolate ORM2 cytochrome oxidase sub...    44   3.3    1
(AY427918) Aphidius ervi isolate ORCCA31 cytochrome oxidase ...    44   3.3    1
(AY427917) Aphidius ervi isolate ORCC21 cytochrome oxidase s...    44   3.3    1
(AY427916) Aphidius ervi isolate NYL5 cytochrome oxidase sub...    44   3.3    1
(AY427915) Aphidius ervi isolate NYL4 cytochrome oxidase sub...    44   3.3    1
(AY427914) Aphidius ervi isolate NYL3 cytochrome oxidase sub...    44   3.3    1
(AY427913) Aphidius ervi isolate NYL2 cytochrome oxidase sub...    44   3.3    1
(AY427912) Aphidius ervi isolate NYG5 cytochrome oxidase sub...    44   3.3    1
(AY427910) Aphidius ervi isolate NYG2 cytochrome oxidase sub...    44   3.3    1
(AY427909) Aphidius ervi isolate MoroccoZ10 cytochrome oxida...    44   3.3    1
(AY427908) Aphidius ervi isolate JapanNagano2 cytochrome oxi...    44   3.3    1
(AY427907) Aphidius ervi isolate HU49 cytochrome oxidase sub...    44   3.3    1
(AY427906) Aphidius ervi isolate HU47 cytochrome oxidase sub...    44   3.3    1
(AY427905) Aphidius ervi isolate HU46 cytochrome oxidase sub...    44   3.3    1
(AY427904) Aphidius ervi isolate HU45 cytochrome oxidase sub...    44   3.3    1
(AY427903) Aphidius ervi isolate FRC3 cytochrome oxidase sub...    44   3.3    1
(AY427902) Aphidius ervi isolate FR8 cytochrome oxidase subu...    44   3.3    1
(AY427901) Aphidius ervi isolate FR7 cytochrome oxidase subu...    44   3.3    1
(AY427900) Aphidius ervi isolate FR6 cytochrome oxidase subu...    44   3.3    1
(AY427899) Aphidius ervi isolate FR5 cytochrome oxidase subu...    44   3.3    1
(AY427898) Aphidius ervi isolate FR3 cytochrome oxidase subu...    44   3.3    1
(AY427897) Aphidius ervi isolate COM5 cytochrome oxidase sub...    44   3.3    1
(AY427896) Aphidius ervi isolate COM4 cytochrome oxidase sub...    44   3.3    1
(AY427895) Aphidius ervi isolate COM2 cytochrome oxidase sub...    44   3.3    1
(AY427894) Aphidius ervi isolate CAR5 cytochrome oxidase sub...    44   3.3    1
(AY427893) Aphidius ervi isolate CAR4 cytochrome oxidase sub...    44   3.3    1
(AY427892) Aphidius ervi isolate CAR2 cytochrome oxidase sub...    44   3.3    1
(AY427891) Aphidius ervi isolate CAR1 cytochrome oxidase sub...    44   3.3    1
(AY427890) Aphidius ervi isolate CAG5 cytochrome oxidase sub...    44   3.3    1
(AY427889) Aphidius ervi isolate CAG4 cytochrome oxidase sub...    44   3.3    1
(AY427888) Aphidius ervi isolate CAG3 cytochrome oxidase sub...    44   3.3    1
(AY427887) Aphidius ervi isolate CAG2 cytochrome oxidase sub...    44   3.3    1
(AY262787) Aphidius ervi clone Wash3 mitochondrial cytochrom...    44   3.3    1
(AY262786) Aphidius ervi clone France2 mitochondrial cytochr...    44   3.3    1
(AY262785) Aphidius ervi clone France1 mitochondrial cytochr...    44   3.3    1
(AY262784) Aphidius ervi clone Colorado mitochondrial cytoch...    44   3.3    1
(AY262783) Aphidius ervi clone ChileA mitochondrial cytochro...    44   3.3    1
(AY262782) Aphidius ervi clone ArgCas mitochondrial cytochro...    44   3.3    1
(AY262781) Aphidius ervi clone ArgTre mitochondrial cytochro...    44   3.3    1
(AY262780) Aphidius ervi clone AerKop1 mitochondrial cytochr...    44   3.3    1
(AY262779) Aphidius ervi clone Wash1 mitochondrial cytochrom...    44   3.3    1
(AY262778) Aphidius ervi clone Calif1 mitochondrial cytochro...    44   3.3    1
(AY262777) Aphidius ervi clone Norway mitochondrial cytochro...    44   3.3    1
(AY262776) Aphidius ervi clone Calif2 mitochondrial cytochro...    44   3.3    1
(AY262775) Aphidius ervi clone OregonM mitochondrial cytochr...    44   3.3    1
(AY262774) Aphidius ervi clone Japan2 mitochondrial cytochro...    44   3.3    1
(AY262773) Aphidius ervi clone Morocco2 mitochondrial cytoch...    44   3.3    1
(AY262772) Aphidius ervi clone Hungary mitochondrial cytochr...    44   3.3    1
(AY262771) Aphidius ervi clone UK1 mitochondrial cytochrome ...    44   3.3    1
(AY262770) Aphidius ervi clone Ecuador1 mitochondrial cytoch...    44   3.3    1
(AY262769) Aphidius ervi clone Japan1 mitochondrial cytochro...    44   3.3    1
(AY262768) Aphidius ervi clone Germany mitochondrial cytochr...    44   3.3    1
(AY262767) Aphidius ervi clone Israel mitochondrial cytochro...    44   3.3    1
(AY262766) Aphidius ervi clone NewYork mitochondrial cytochr...    44   3.3    1
(AY262765) Aphidius ervi clone ChileF mitochondrial cytochro...    44   3.3    1
(AY262764) Aphidius ervi clone Turkey mitochondrial cytochro...    44   3.3    1
(AY262763) Aphidius ervi clone Italy mitochondrial cytochrom...    44   3.3    1
(AY262762) Aphidius ervi clone Wash2 mitochondrial cytochrom...    44   3.3    1
(AY194285) Diaeretiella rapae haplotype Z cytochrome oxidase...    44   3.3    1
(AY194284) Diaeretiella rapae haplotype X cytochrome oxidase...    44   3.3    1
(AY194283) Diaeretiella rapae haplotype W cytochrome oxidase...    44   3.3    1
(AY194282) Diaeretiella rapae haplotype V cytochrome oxidase...    44   3.3    1
(AY194281) Diaeretiella rapae haplotype U cytochrome oxidase...    44   3.3    1
(AY194280) Diaeretiella rapae haplotype T cytochrome oxidase...    44   3.3    1
(AY194279) Diaeretiella rapae haplotype S cytochrome oxidase...    44   3.3    1
(AY194278) Diaeretiella rapae haplotype R cytochrome oxidase...    44   3.3    1
(AY194277) Diaeretiella rapae haplotype Q cytochrome oxidase...    44   3.3    1
(AY194276) Diaeretiella rapae haplotype P cytochrome oxidase...    44   3.3    1
(AY194275) Diaeretiella rapae haplotype OO cytochrome oxidas...    44   3.3    1
(AY194274) Diaeretiella rapae haplotype O cytochrome oxidase...    44   3.3    1
(AY194273) Diaeretiella rapae haplotype NN cytochrome oxidas...    44   3.3    1
(AY194272) Diaeretiella rapae haplotype N cytochrome oxidase...    44   3.3    1
(AY194271) Diaeretiella rapae haplotype M cytochrome oxidase...    44   3.3    1
(AY194270) Diaeretiella rapae haplotype LL cytochrome oxidas...    44   3.3    1
(AY194269) Diaeretiella rapae haplotype L cytochrome oxidase...    44   3.3    1
(AY194268) Diaeretiella rapae haplotype KK cytochrome oxidas...    44   3.3    1
(AY194267) Diaeretiella rapae haplotype K cytochrome oxidase...    44   3.3    1
(AY194266) Diaeretiella rapae haplotype JJ cytochrome oxidas...    44   3.3    1
(AY194265) Diaeretiella rapae haplotype J cytochrome oxidase...    44   3.3    1
(AY194264) Diaeretiella rapae haplotype I cytochrome oxidase...    44   3.3    1
(AY194263) Diaeretiella rapae haplotype HH cytochrome oxidas...    44   3.3    1
(AY194262) Diaeretiella rapae haplotype GGG cytochrome oxida...    44   3.3    1
(AY194261) Diaeretiella rapae haplotype GG cytochrome oxidas...    44   3.3    1
(AY194260) Diaeretiella rapae haplotype G cytochrome oxidase...    44   3.3    1
(AY194259) Diaeretiella rapae haplotype FFF cytochrome oxida...    44   3.3    1
(AY194258) Diaeretiella rapae haplotype FF cytochrome oxidas...    44   3.3    1
(AY194257) Diaeretiella rapae haplotype F cytochrome oxidase...    44   3.3    1
(AY194256) Diaeretiella rapae haplotype EEE cytochrome oxida...    44   3.3    1
(AY194255) Diaeretiella rapae haplotype EE cytochrome oxidas...    44   3.3    1
(AY194254) Diaeretiella rapae haplotype E cytochrome oxidase...    44   3.3    1
(AY194253) Diaeretiella rapae haplotype DDD cytochrome oxida...    44   3.3    1
(AY194252) Diaeretiella rapae haplotype DD cytochrome oxidas...    44   3.3    1
(AY194251) Diaeretiella rapae haplotype CCC cytochrome oxida...    44   3.3    1
(AY194250) Diaeretiella rapae haplotype CC cytochrome oxidas...    44   3.3    1
(AY194249) Diaeretiella rapae haplotype C cytochrome oxidase...    44   3.3    1
(AY194248) Diaeretiella rapae haplotype BBB cytochrome oxida...    44   3.3    1
(AY194247) Diaeretiella rapae haplotype BB cytochrome oxidas...    44   3.3    1
(AY194246) Diaeretiella rapae haplotype B cytochrome oxidase...    44   3.3    1
(AY194245) Diaeretiella rapae haplotype AAA cytochrome oxida...    44   3.3    1
(AY194244) Diaeretiella rapae haplotype A cytochrome oxidase...    44   3.3    1
(AL607023) Human DNA sequence from clone RP11-65E10 on chrom...    44   3.3    1
(AL592402) Human DNA sequence from clone RP11-554K11 on chro...    44   3.3    1
(AL157826) Human DNA sequence from clone RP11-176P17 on chro...    44   3.3    1
(AC107246) Rattus norvegicus clone CH230-147M17, WORKING DRA...    44   3.3    1
(CU571230) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   3.3    1
(AC026154) Homo sapiens chromosome 1 clone RP11-285A16, WORK...    44   3.3    1
(CU468157) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   3.3    1
(CU466977) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   3.3    1
(AC221115) Bos taurus clone CH240-393J19, WORKING DRAFT SEQU...    44   3.3    1
(AC220605) Bos taurus clone CH240-352E3, WORKING DRAFT SEQUE...    44   3.3    1
(AC013345) Homo sapiens clone RP11-22C2, WORKING DRAFT SEQUE...    44   3.3    1
(BH376447) AG-ND-105A10.TR ND-TAM Anopheles gambiae genomic ...    44   3.3    1
(BH367905) AG-ND-149H23.TR ND-TAM Anopheles gambiae genomic ...    44   3.3    1
(FH398989) CHO_OF4813xg06r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   3.3    1
(EK331347) 1095467024736 Global-Ocean-Sampling_GS-31-01-01-1...    44   3.3    1
(DE440650) Bombyx mori genomic DNA, Fosmid clone:GBMFno29_c2...    44   3.3    1
(AG297607) Mus musculus molossinus DNA, clone:MSMg01-074J09....    44   3.3    1
(CO868922) Ep_CT_04B04_SKPL Eurydice pulchra CT library Eury...    44   3.3    1
(EW658848) rtra12_g20r1.y1 tra Sus scrofa cDNA 5', mRNA sequ...    44   3.3    1
(CU104722) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   5.5    3
(CU928226) Zebrafish DNA sequence from clone CH73-211O14 in ...    40   5.6    3
(BX465207) Zebrafish DNA sequence from clone DKEY-103I16 in ...    36   7.4    3
(AM480991) Vitis vinifera contig VV78X019984.3, whole genome...    38   8.5    2
(CU633206) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   8.9    2

>(AU037569) Dictyostelium discoideum slug cDNA, clone SSD796.
          Length = 309

 Score =  163 bits (82), Expect(2) = 1e-51
 Identities = 88/90 (97%)
 Strand = Plus / Plus


Query: 34  gtttgttaaatcacaaaataaatgttaatattatcttaaatctgaatggtccatttagat 93
           |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1   gtttgttaaatcacaaaataaatgttaatattattttaaatttgaatggtccatttagat 60


Query: 94  aaaaaaggattatttcaaggataggaaatc 123
           ||||||||||||||||||||||||||||||
Sbjct: 61  aaaaaaggattatttcaaggataggaaatc 90

 Score = 75.8 bits (38), Expect(2) = 1e-51
 Identities = 38/38 (100%)
 Strand = Plus / Plus


Query: 295 gatggaagtatttcaataaaattattataataaaatgt 332
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gatggaagtatttcaataaaattattataataaaatgt 299

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 236,893,813
Number of extensions: 16086378
Number of successful extensions: 1523995
Number of sequences better than 10.0: 170
Length of query: 341
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 318
Effective length of database: 99,442,330,388
Effective search space: 31622661063384
Effective search space used: 31622661063384
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

Query= Contig-U04919-1 (Contig-U04919-1Q) /CSM_Contig/Contig-U04919-1Q.Seq.d
         (341 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 234,910,193
Number of extensions: 2075843
Number of successful extensions: 2062
Number of sequences better than 10.0: 0
Number of HSP's gapped: 2062
Number of HSP's successfully gapped: 0
Length of query: 113
Length of database: 1,061,185,681
Length adjustment: 80
Effective length of query: 33
Effective length of database: 799,709,841
Effective search space: 26390424753
Effective search space used: 26390424753
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)

 psg: 0.25  gvh: 0.05  alm: 0.64  top: 0.53  tms: 0.00  mit: 0.59  mip: 0.00
 nuc: 0.53  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 76.0 %: nuclear
	 12.0 %: mitochondrial
	 12.0 %: cytoplasmic

>> prediction for Contig-U04919-1 is nuc