NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04794-1
Contig ID Contig-U04794-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04794-1 (Contig-U04794-1Q) /CSM_Contig/Contig-U04794-1Q.Seq.d
AACAGAAGCAAAAACAGAAATGTCATCTAAAATTATAAAAGAAAATAAAA
GACTTGTTTTAGATTTATATAAAAGATGTTTATATTCAGCAAAAAGGTGT
CCAAAATATCAGAATCAAATGATGATGGAATCATATATTAAATTAAAATT
TAGATCAAATAAAGAAATTCACCAAAAAGATTTCGAAACAATTGAAAACC
TTCTTAAACAAGGTGAAGAAGAATTAAAATCAATGAATGATTTTCATGAA
TTGAGGGCAAAAAGTAAATCTGGACAAGACCATGAATCAATTTTAAATGA
TTGTTTTGATGATGATTTTAATTATATAGGTTCGACACCAACTGTAAAGA
AATAAAAAAAGTAATAATAAAAAAAAAAAAAAAAATTTTGTATATAGAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 428
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 4890347
End point 4889936
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U04794
List of clone(s) 

est1=SSC886F,1,429
Translated Amino Acid sequence 
TEAKTEMSSKIIKENKRLVLDLYKRCLYSAKRCPKYQNQMMMESYIKLKFRSNKEIHQKD
FETIENLLKQGEEELKSMNDFHELRAKSKSGQDHESILNDCFDDDFNYIGSTPTVKK*kk
***kkkkkfci*kkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
nrsknrnvi*nykrk*ktcfrfi*kmfifskkvskisesnddgiiy*iki*ik*rnspkr
frnn*kps*tr*rrikine*fs*iegkk*iwtrp*infk*lf***f*lyrfdtnckeikk
viikkkkkilyiekkkkkkkkk


Frame B:
TEAKTEMSSKIIKENKRLVLDLYKRCLYSAKRCPKYQNQMMMESYIKLKFRSNKEIHQKD
FETIENLLKQGEEELKSMNDFHELRAKSKSGQDHESILNDCFDDDFNYIGSTPTVKK*kk
***kkkkkfci*kkkkkkkkkk


Frame C:
qkqkqkchlkl*kkikdlf*iyikdvyiqqkgvqnirik**wnhiln*nldqikkftkki
skqlktflnkvkkn*nq*mifmn*gqkvnldktmnqf*mivlmmilii*vrhql*rnkks
nnkkkkknfvyrkkkkkkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04794-1 (Contig-U04794-1Q)
/CSM_Contig/Contig-U04794-1Q.Seq.d
         (428 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04794-1 (Contig-U04794-1Q) /CSM_Contig/Conti...   700  0.0
Contig-U11292-1 (Contig-U11292-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U13355-1 (Contig-U13355-1Q) /CSM_Contig/Conti...    38  0.007
Contig-U06628-1 (Contig-U06628-1Q) /CSM_Contig/Conti...    38  0.007
Contig-U11881-1 (Contig-U11881-1Q) /CSM_Contig/Conti...    36  0.030
Contig-U14273-1 (Contig-U14273-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U13900-1 (Contig-U13900-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U12838-1 (Contig-U12838-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U11611-1 (Contig-U11611-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U11525-1 (Contig-U11525-1Q) /CSM_Contig/Conti...    34  0.12

>Contig-U04794-1 (Contig-U04794-1Q) /CSM_Contig/Contig-U04794-1Q.Seq.d
          Length = 428

 Score =  700 bits (353), Expect = 0.0
 Identities = 353/353 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacagaagcaaaaacagaaatgtcatctaaaattataaaagaaaataaaagacttgtttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aacagaagcaaaaacagaaatgtcatctaaaattataaaagaaaataaaagacttgtttt 60

                                                                       
Query: 61  agatttatataaaagatgtttatattcagcaaaaaggtgtccaaaatatcagaatcaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agatttatataaaagatgtttatattcagcaaaaaggtgtccaaaatatcagaatcaaat 120

                                                                       
Query: 121 gatgatggaatcatatattaaattaaaatttagatcaaataaagaaattcaccaaaaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgatggaatcatatattaaattaaaatttagatcaaataaagaaattcaccaaaaaga 180

                                                                       
Query: 181 tttcgaaacaattgaaaaccttcttaaacaaggtgaagaagaattaaaatcaatgaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcgaaacaattgaaaaccttcttaaacaaggtgaagaagaattaaaatcaatgaatga 240

                                                                       
Query: 241 ttttcatgaattgagggcaaaaagtaaatctggacaagaccatgaatcaattttaaatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttcatgaattgagggcaaaaagtaaatctggacaagaccatgaatcaattttaaatga 300

                                                                
Query: 301 ttgttttgatgatgattttaattatataggttcgacaccaactgtaaagaaat 353
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgttttgatgatgattttaattatataggttcgacaccaactgtaaagaaat 353


>Contig-U11292-1 (Contig-U11292-1Q) /CSM_Contig/Contig-U11292-1Q.Seq.d
          Length = 1939

 Score = 44.1 bits (22), Expect = 1e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 29  aaaattataaaagaaaataaaa 50
           ||||||||||||||||||||||
Sbjct: 421 aaaattataaaagaaaataaaa 442


>Contig-U13355-1 (Contig-U13355-1Q) /CSM_Contig/Contig-U13355-1Q.Seq.d
          Length = 675

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 28  taaaattataaaagaaaataaaa 50
           |||||||| ||||||||||||||
Sbjct: 610 taaaattaaaaaagaaaataaaa 632


 Score = 28.2 bits (14), Expect = 7.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                         
Query: 31  aattataaaagaaa 44
           ||||||||||||||
Sbjct: 151 aattataaaagaaa 138


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9800
Number of Sequences: 6905
Number of extensions: 9800
Number of successful extensions: 1231
Number of sequences better than 10.0: 426
length of query: 428
length of database: 5,674,871
effective HSP length: 16
effective length of query: 412
effective length of database: 5,564,391
effective search space: 2292529092
effective search space used: 2292529092
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 7. 1
Homology vs DNA 
Query= Contig-U04794-1 (Contig-U04794-1Q) /CSM_Contig/Contig-U04794-1Q.Seq.d
         (428 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU071979) Dictyostelium discoideum slug cDNA, clone SSC886.      476   e-130  1
(CR391934) Zebrafish DNA sequence from clone DKEY-279E7 in l...    30   0.003  3
(FH558617) CHO_OF4477xn17f1.ab1 CHO_OF4 Nicotiana tabacum ge...    54   0.004  1
(AC204805) Procavia capensis clone CH280-219H2, WORKING DRAF...    38   0.057  6
(ET629268) bext_c_147 Bulleidia extructa W1219 genomic libra...    50   0.069  1
(AC188180) Rhesus macaque BAC clone CH250-23H12 from chromos...    44   0.071  6
(AC215944) Populus trichocarpa clone POP073-M17, complete se...    32   0.077  8
(AB018118) Arabidopsis thaliana genomic DNA, chromosome 5, P...    36   0.084  4
(AM487420) Vitis vinifera contig VV78X217490.10, whole genom...    44   0.11   2
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen...    34   0.11   13
(AE000783) Borrelia burgdorferi B31, complete genome.              38   0.12   12
(CR925757) Zebrafish DNA sequence from clone CH211-208H16 in...    44   0.12   4
(AE001438) Clostridium acetobutylicum ATCC 824 megaplasmid p...    40   0.13   5
(AP008972) Finegoldia magna ATCC 29328 plasmid pFMC DNA, com...    34   0.15   7
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s...    36   0.16   10
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome.    34   0.18   11
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    32   0.19   14
(CU570679) M.truncatula DNA sequence from clone MTH2-17J20 o...    34   0.19   6
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    38   0.24   10
(CL873075) abe85g11.x1 Soybean methylation filtered genomic ...    36   0.25   2
(AC111516) Rattus norvegicus clone CH230-140A9, *** SEQUENCI...    34   0.25   6
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    34   0.27   8
(AY729654) Sudan ebolavirus strain Gulu, complete genome.          48   0.27   1
(DQ871219) Triticum turgidum subsp. dicoccoides clones BAC 4...    48   0.27   1
(AM485573) Vitis vinifera, whole genome shotgun sequence, co...    48   0.27   1
(AF153276) Populus tremula x Populus tremuloides pumilio dom...    48   0.27   1
(EA700623) Sequence 79502 from patent US 7365185.                  48   0.27   1
(AC232258) Triticum aestivum clone TAACSPALLhA_1639D16, *** ...    48   0.27   1
(AA999407) MCCE3259.M1F Schistosoma mansoni, cercariae Schis...    48   0.27   1
(BM884590) rc12h04.y1 Meloidogyne hapla egg pAMP1 v1 Meloido...    48   0.27   1
(BM884305) rc21g02.y1 Meloidogyne hapla egg pAMP1 v1 Meloido...    48   0.27   1
(AC178932) Strongylocentrotus purpuratus clone R3-3115M20, W...    40   0.28   2
(CP001205) Borrelia burgdorferi ZS7, complete genome.              38   0.28   11
(AC222134) Bos taurus clone CH240-371A22, WORKING DRAFT SEQU...    40   0.31   4
(AU076395) Dictyostelium discoideum slug cDNA, clone SSI696.       38   0.32   2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    32   0.32   11
(AL954677) Zebrafish DNA sequence from clone DKEY-13J14 in l...    36   0.37   5
(EK077540) 1092961064042 Global-Ocean-Sampling_GS-31-01-01-1...    36   0.40   2
(CP000395) Borrelia afzelii PKo, complete genome.                  36   0.40   9
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9...    36   0.46   8
(CR626904) Zebrafish DNA sequence from clone DKEY-53D10 in l...    36   0.49   5
(AL844507) Plasmodium falciparum chromosome 8.                     36   0.55   11
(BX005438) Zebrafish DNA sequence from clone DKEY-3E9 in lin...    34   0.57   7
(CU928426) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.58   2
(AC124029) Mus musculus chromosome 1, clone RP23-238E7, comp...    34   0.58   2
(CU915405) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   0.59   2
(AC182736) Pan troglodytes BAC clone CH251-15A9 from chromos...    46   0.64   3
(AC197101) Zea mays chromosome 5 clone ZMMBBb-545D18; ZMMBBb...    36   0.68   5
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8...    36   0.70   9
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    34   0.71   14
(AC200982) Strongylocentrotus purpuratus clone R3-12A5, WORK...    40   0.74   3
(DQ667174) Homo sapiens protein kinase, cAMP-dependent, cata...    44   0.78   3
(BZ595693) SALK_089472.55.40.n Arabidopsis thaliana TDNA ins...    34   0.80   2
(DT957227) CFW150-B03.x1d-t SHGC-CFW Gasterosteus aculeatus ...    32   0.97   3
(AF074020) Mus musculus integral membrane protein 2A (Itm2a)...    46   1.1    1
(AC090017) Homo sapiens 12q BAC RP11-471N19 (Roswell Park Ca...    46   1.1    1
(AC135873) Rattus norvegicus clone CH230-317O9, *** SEQUENCI...    46   1.1    1
(AC122580) Rattus norvegicus clone CH230-29H2, *** SEQUENCIN...    46   1.1    1
(AC199517) Zea mays chromosome 3 clone CH201-29P17; ZMMBBc00...    46   1.1    1
(AC163149) Bos taurus clone CH240-78C13, WORKING DRAFT SEQUE...    46   1.1    1
(FI208071) CccaBa008-B18TR CccABa Cajanus cajan genomic clon...    46   1.1    1
(EK307042) 1095462384214 Global-Ocean-Sampling_GS-31-01-01-1...    46   1.1    1
(EJ491085) 1095403539843 Global-Ocean-Sampling_GS-28-01-01-1...    46   1.1    1
(DX492519) Cpl34345 Papaya Genomic DNA BAC Library Carica pa...    46   1.1    1
(CG377330) OGYBC78TV ZM_0.7_1.5_KB Zea mays genomic clone ZM...    46   1.1    1
(CG377319) OGYBC78TH ZM_0.7_1.5_KB Zea mays genomic clone ZM...    46   1.1    1
(CC667621) OGLBJ45TV ZM_0.7_1.5_KB Zea mays genomic clone ZM...    46   1.1    1
(CT816640) Paramecium tetraurelia 5-PRIME EST from clone LK0...    46   1.1    1
(CT776890) Paramecium tetraurelia 5-PRIME EST from clone LK0...    46   1.1    1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    46   1.1    1
(CP000013) Borrelia garinii PBi, complete genome.                  32   1.1    9
(AC106501) Rattus norvegicus clone CH230-215G2, *** SEQUENCI...    44   1.1    4
(AC098235) Rattus norvegicus clone CH230-1F15, *** SEQUENCIN...    38   1.2    4
(CU928264) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   1.2    6
(AC200368) Microcebus murinus clone CH257-387K14, WORKING DR...    40   1.2    4
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    32   1.2    9
(AC124120) Mus musculus chromosome 1, clone RP24-64M13, comp...    40   1.2    4
(FG298107) 1108793299550 New World Screwworm Larvae 9387 EST...    34   1.2    2
(EJ929732) 1093018800747 Global-Ocean-Sampling_GS-30-02-01-1...    40   1.2    2
(AC152926) Tribolium castaneum  BAC T.cast_C1K1 (Clemson Uni...    44   1.3    3
(AL450063) Human DNA sequence from clone RP11-82H13 on chrom...    44   1.3    3
(FK872210) EST_crog_evp_915540 crog_evp Caligus rogercressey...    42   1.4    2
(AC091927) Homo sapiens chromosome 5 clone RP11-292A2, WORKI...    36   1.4    4
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    40   1.4    14
(FP102340) H.melpomene DNA sequence from clone AEHM-31B4.          38   1.4    6
(AP008209) Oryza sativa (japonica cultivar-group) genomic DN...    32   1.5    2
(AP008214) Oryza sativa (japonica cultivar-group) genomic DN...    32   1.5    2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    30   1.5    8
(FI307477) AdH1168-CPY2-N12TF AdH1 Arachis duranensis genomi...    34   1.6    2
(AC120723) Rattus norvegicus clone CH230-293E11, WORKING DRA...    36   1.6    4
(CP001279) Nautilia profundicola AmH, complete genome.             34   1.7    12
(AC207866) Spermophilus tridecemlineatus clone VMRC20-232J12...    38   1.8    4
(GC698488) Sequence 13733 from patent US 6812339.                  44   1.8    3
(CR932079) Paramecium tetraurelia centrin-related protein gene.    40   1.9    3
(AC035249) Arabidopsis thaliana chromosome 1 BAC F8D11 genom...    36   1.9    4
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    36   1.9    5
(AC220874) Bos taurus clone CH240-342G7, WORKING DRAFT SEQUE...    34   2.0    5
(AC136785) Homo sapiens BAC clone RP11-124C9 from 4, complet...    36   2.1    4
(DX561344) GH_MBb0058B18r GH_MBb Gossypium hirsutum genomic ...    30   2.1    3
(AC185796) Bos taurus clone RP42-255I10, WORKING DRAFT SEQUE...    34   2.1    2
(AC120535) Oryza sativa Japonica Group chromosome 3 clone OS...    32   2.2    2
(AP004661) Oryza sativa Japonica Group genomic DNA, chromoso...    32   2.2    2
(AC185729) Bos taurus clone RP42-134K19, WORKING DRAFT SEQUE...    34   2.2    2
(CR931739) Medicago truncatula chromosome 5 clone mth2-7j2, ...    32   2.2    6
(AC185905) Bos taurus clone RP42-102N18, WORKING DRAFT SEQUE...    34   2.2    2
(AM470686) Vitis vinifera contig VV78X085117.16, whole genom...    38   2.3    4
(CP000084) Candidatus Pelagibacter ubique HTCC1062, complete...    34   2.3    13
(AM487553) Vitis vinifera contig VV78X203420.3, whole genome...    34   2.4    3
(FM250118) Caenorhabditis elegans EST, clone  B05_ce5.trans....    42   2.4    2
(AM485455) Vitis vinifera, whole genome shotgun sequence, co...    34   2.4    3
(CR297994) mte1-15A14FM1 BAC end, cultivar Jemalong A17 of M...    30   2.4    3
(EA699446) Sequence 78325 from patent US 7365185.                  32   2.4    2
(AM483781) Vitis vinifera contig VV78X202658.5, whole genome...    40   2.5    2
(EA680389) Sequence 59268 from patent US 7365185.                  32   2.5    2
(AB088804) Scirpodendron ghaeri chloroplast matK gene for ma...    36   2.8    2
(EA641544) Sequence 20423 from patent US 7365185.                  32   2.8    2
(AC199148) Zea mays chromosome 10 clone CH201-523G10; ZMMBBc...    36   2.8    4
(CL645349) CH213-93B24.SP6 CH213 Gasterosteus aculeatus geno...    32   2.8    2
(AC092638) Homo sapiens BAC clone RP11-363G3 from 2, complet...    36   2.8    6
(CD101805) AGENCOURT_13980692 NIH_MGC_187 Homo sapiens cDNA ...    32   2.9    2
(CR294641) mte1-10H11FM1 BAC end, cultivar Jemalong A17 of M...    30   2.9    3
(FE687420) Pv010D_M13R_C03.ab1 Phaseolus vulgaris cv Early g...    32   2.9    2
(AJ677035) Bos taurus EST, clone KN224-022_L03.                    34   2.9    2
(AC108867) Homo sapiens BAC clone RP11-102H15 from 4, comple...    42   3.0    4
(EC241061) 46255 CK01 Drosophila melanogaster cDNA clone CK0...    32   3.0    2
(BX322583) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    38   3.0    4
(AM658726) Entamoeba moshkovskii FIC GSS, clone mosh082f06.q1k.    32   3.0    3
(AC189559) Brassica rapa subsp. pekinensis clone KBrH007A03,...    44   3.0    2
(AP005672) Physcomitrella patens subsp. patens chloroplast D...    36   3.1    5
(CP000932) Campylobacter lari RM2100, complete genome.             32   3.1    13
(CP000939) Clostridium botulinum B1 str. Okra, complete genome.    32   3.1    12
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    32   3.4    6
(EK259821) 1095462113861 Global-Ocean-Sampling_GS-31-01-01-1...    30   3.5    3
(EA632998) Sequence 11877 from patent US 7365185.                  34   3.5    3
(AC174330) Medicago truncatula clone mth2-145c20, WORKING DR...    40   3.7    3
(AC094740) Rattus norvegicus clone CH230-5C10, *** SEQUENCIN...    40   3.7    3
(AC232202) Monodelphis domestica clone VMRC18-207L16, WORKIN...    32   3.8    6
(AC196809) Rhesus Macaque  BAC CH250-221O18 () complete sequ...    42   3.8    2
(AC225507) Medicago truncatula clone mth2-161b5, WORKING DRA...    36   3.8    3
(AX346974) Sequence 2045 from Patent WO0200928.                    38   3.9    2
(AC140745) Rattus norvegicus clone CH230-382H7, WORKING DRAF...    44   3.9    2
(CU740081) Brassica rapa subsp. pekinensis clone KBrB012C14,...    32   4.2    4
(CU207210) Medicago truncatula chromosome 5 clone mth2-27n19...    38   4.2    3
(AL669895) Mouse DNA sequence from clone RP23-31N7 on chromo...    44   4.3    1
(AC196863) MACACA MULATTA BAC clone CH250-153I8 from chromos...    44   4.3    1
(EU011573) Fusarium proliferatum voucher ITEM 4303 plasmid p...    44   4.3    1
(EU011572) Fusarium proliferatum voucher ITEM 4295 plasmid p...    44   4.3    1
(EU011571) Fusarium proliferatum voucher ITEM 4294 plasmid p...    44   4.3    1
(EU011570) Fusarium proliferatum voucher ITEM 2343 plasmid p...    44   4.3    1
(EU011569) Fusarium proliferatum voucher ITEM 2341 plasmid p...    44   4.3    1
(EU011568) Fusarium proliferatum voucher ITEM 2337 plasmid p...    44   4.3    1
(EF622512) Fusarium proliferatum strain ITEM-2336 plasmid pF...    44   4.3    1
(AP008211) Oryza sativa (japonica cultivar-group) genomic DN...    44   4.3    1
(AM778094) Carica papaya Y chromosome sequence, clone PH 52H15.    44   4.3    1
(AM482964) Vitis vinifera, whole genome shotgun sequence, co...    44   4.3    1
(AM478228) Vitis vinifera contig VV78X154899.6, whole genome...    44   4.3    1
(AM476777) Vitis vinifera contig VV78X091525.8, whole genome...    44   4.3    1
(AM475728) Vitis vinifera contig VV78X016421.4, whole genome...    44   4.3    1
(AM463789) Vitis vinifera, whole genome shotgun sequence, co...    44   4.3    1
(AM463042) Vitis vinifera contig VV78X225381.7, whole genome...    44   4.3    1
(AM457436) Vitis vinifera contig VV78X189170.7, whole genome...    44   4.3    1
(AM455210) Vitis vinifera contig VV78X121003.8, whole genome...    44   4.3    1
(AM444490) Vitis vinifera contig VV78X218820.7, whole genome...    44   4.3    1
(AM435541) Vitis vinifera contig VV78X014485.3, whole genome...    44   4.3    1
(AM432986) Vitis vinifera, whole genome shotgun sequence, co...    44   4.3    1
(AC183495) Brassica oleracea Contig A, complete sequence.          44   4.3    1
(AC151916) Medicago truncatula clone mth2-57h18, complete se...    44   4.3    1
(AC108501) Oryza sativa Japonica Group chromosome 5 clone OJ...    44   4.3    1
(AB469055) Oryza barthii DNA, ADH1 region, complete sequence...    44   4.3    1
(EA702615) Sequence 81494 from patent US 7365185.                  44   4.3    1
(EA675199) Sequence 54078 from patent US 7365185.                  44   4.3    1
(CS742028) Sequence 10024 from Patent WO2005083127.                44   4.3    1
(AY043292) Tribolium castaneum strain GA-2 HOMC gene cluster...    44   4.3    1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    44   4.3    1
(AL354762) Human DNA sequence from clone RP11-342E2 on chrom...    44   4.3    1
(AC105459) Homo sapiens BAC clone RP11-115D14 from 7, comple...    44   4.3    1
(AC093283) Homo sapiens chromosome 5 clone RP11-428C6, compl...    44   4.3    1
(AC069426) Homo sapiens 3 BAC RP11-200O17 (Roswell Park Canc...    44   4.3    1
(AC157082) Bos taurus clone CH240-60P13, WORKING DRAFT SEQUE...    44   4.3    1
(AC156043) Bos taurus clone CH240-51P10, WORKING DRAFT SEQUE...    44   4.3    1
(AC144388) Medicago truncatula chromosome 8 clone mth2-16a10...    44   4.3    1
(AC135299) Rattus norvegicus clone CH230-345B23, WORKING DRA...    44   4.3    1
(AC133244) Rattus norvegicus clone CH230-8A24, *** SEQUENCIN...    44   4.3    1
(AC127206) Rattus norvegicus clone CH230-84I22, *** SEQUENCI...    44   4.3    1
(AC123140) Rattus norvegicus clone CH230-189F23, *** SEQUENC...    44   4.3    1
(AC109959) Rattus norvegicus clone CH230-329F22, *** SEQUENC...    44   4.3    1
(AC097102) Homo sapiens chromosome 3 clone RP11-699D17, WORK...    44   4.3    1
(CU855512) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.3    1
(AC073984) Homo sapiens chromosome 3 clone RP11-394K18, WORK...    44   4.3    1
(AC069041) Homo sapiens chromosome 1 clone RP11-307H8 map 1,...    44   4.3    1
(CU462866) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.3    1
(CT797474) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.3    1
(AL450308) Human DNA sequence *** SEQUENCING CANCELLED *** f...    44   4.3    1
(AC233212) Medicago truncatula chromosome 2 clone mth2-64g2,...    44   4.3    1
(AC231366) Medicago truncatula clone mth2-90g22, WORKING DRA...    44   4.3    1
(AC212380) Nomascus leucogenys chromosome UNK clone CH271-42...    44   4.3    1
(AC202586) Medicago truncatula clone mth2-33i12, WORKING DRA...    44   4.3    1
(AC171376) Microcebus murinus clone CH257-12K14, WORKING DRA...    44   4.3    1
(AC165371) Oryza sativa Japonica Group chromosome 5 clone OS...    44   4.3    1
(AC025340) Homo sapiens chromosome 1 clone RP11-742B6 map 1,...    44   4.3    1
(AC023885) Homo sapiens chromosome 5 clone RP11-399M5, WORKI...    44   4.3    1
(AC007867) Homo sapiens chromosome 17 clone RP11-339D15 map ...    44   4.3    1
(FI237139) CccaBb031-G17JR CccABb Cajanus cajan genomic clon...    44   4.3    1
(ER575254) 1093015808917 Global-Ocean-Sampling_GS-36-01-01-2...    44   4.3    1
(ER501675) 1093015400727 Global-Ocean-Sampling_GS-35-01-01-1...    44   4.3    1
(EK377243) 1095469445699 Global-Ocean-Sampling_GS-31-01-01-1...    44   4.3    1
(EJ872433) 1093018353045 Global-Ocean-Sampling_GS-30-02-01-1...    44   4.3    1
(EJ796895) 1093017405817 Global-Ocean-Sampling_GS-30-02-01-1...    44   4.3    1
(EJ669890) 1092955054410 Global-Ocean-Sampling_GS-30-02-01-1...    44   4.3    1
(DX402439) GK_Sa0001F01.b1 Gossypioides kirkii WGS library G...    44   4.3    1
(CU803789) A BAC library has been constructed from PN40024 g...    44   4.3    1
(CU796859) A BAC library has been constructed from PN40024 g...    44   4.3    1
(CU795515) A BAC library has been constructed from PN40024 g...    44   4.3    1
(CU763375) A BAC library has been constructed from PN40024 g...    44   4.3    1
(CU744304) A BAC library has been constructed from PN40024 g...    44   4.3    1
(CT491634) A BAC library has been constructed from cultivar ...    44   4.3    1
(CT201937) Sus scrofa genomic clone CH242-145P6, genomic sur...    44   4.3    1
(AG634213) Macaca fuscata fuscata DNA, clone: MSB2-037F08_R,...    44   4.3    1
(CG923924) MBEJC76TR mth2 Medicago truncatula genomic clone ...    44   4.3    1
(AG196993) Pan troglodytes DNA, clone: RP43-076O11.T7.             44   4.3    1
(ES397292) MUT11-P04.x1d-t SHGC-MUT Mytilus californianus cD...    44   4.3    1
(DV627520) 98157.1 Cold Sweetening C Solanum tuberosum cDNA ...    44   4.3    1
(DN338213) LIB3187-048-P1-K1-E8 LIB3187 Canis lupus familiar...    44   4.3    1
(BY930449) Bombyx mori cDNA, clone:E_EL_ovS0_10B03_R_0, 3' e...    44   4.3    1
(EX267269) 1447731_5_F09_043 PY06 Carica papaya cDNA, mRNA s...    44   4.3    1
(CU856046) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   4.4    5
(AC211305) Populus trichocarpa clone POP004-I01, complete se...    32   4.5    4
(AL606965) Mouse DNA sequence from clone RP23-313I15 on chro...    38   4.6    6
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    36   4.6    7
(EF508371) Rhodomonas salina strain CCMP1319 chloroplast, co...    38   4.6    3
(GM887650) Sequence 117 from Patent WO2008137089.                  32   4.7    11
(AC146711) Medicago truncatula clone mth2-114d1, complete se...    40   4.7    3
(AC158909) Mus musculus chromosome 1, clone RP23-118K4, comp...    40   4.7    2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    38   4.7    6
(AC123718) Mus musculus chromosome 1, clone RP23-401A11, com...    40   4.8    2
(AC146058) Pan troglodytes BAC clone RP43-92A10 from chromos...    40   5.0    4
(AL670181) Mouse DNA sequence from clone RP23-216P24 on chro...    36   5.1    4
(ER479279) 1093015254349 Global-Ocean-Sampling_GS-35-01-01-1...    40   5.1    2
(L63545) Lymphocystis disease virus 1, complete genome.            38   5.1    4
(EJ733275) 1092961003431 Global-Ocean-Sampling_GS-30-02-01-1...    40   5.2    2
(AM459410) Vitis vinifera contig VV78X132888.40, whole genom...    34   5.2    3
(CU560954) Spc_2YH19 cDNA clone of Developmental Stages Libr...    36   5.2    2
(EJ409118) 1093012122589 Global-Ocean-Sampling_GS-28-01-01-1...    40   5.3    2
(ER294041) 1092343629455 Global-Ocean-Sampling_GS-34-01-01-1...    36   5.3    2
(EK159524) 1095458020243 Global-Ocean-Sampling_GS-31-01-01-1...    38   5.4    2
(EJ187008) 1092344159627 Global-Ocean-Sampling_GS-27-01-01-1...    40   5.4    2
(AC189183) Brassica rapa subsp. pekinensis clone KBrB001A20,...    28   5.4    7
(AC114265) Dictyostelium discoideum chromosome 2 map 4520461...    38   5.4    4
(EJ969443) 1093022069566 Global-Ocean-Sampling_GS-30-02-01-1...    40   5.5    2
(EJ922143) 1093018649573 Global-Ocean-Sampling_GS-30-02-01-1...    38   5.5    2
(EJ575052) 1092960090786 Global-Ocean-Sampling_GS-29-01-01-1...    40   5.7    2
(EJ837966) 1093017812372 Global-Ocean-Sampling_GS-30-02-01-1...    40   5.7    2
(EJ426537) 1093015231398 Global-Ocean-Sampling_GS-28-01-01-1...    40   5.7    2
(AC131145) Rattus norvegicus clone CH230-270B11, *** SEQUENC...    40   5.7    4
(EJ494401) 1095403562843 Global-Ocean-Sampling_GS-28-01-01-1...    38   5.8    2
(AC129698) Rattus norvegicus clone CH230-10O17, *** SEQUENCI...    40   5.8    4
(EJ993579) 1093023069164 Global-Ocean-Sampling_GS-30-02-01-1...    40   5.8    2
(AC135740) Rattus norvegicus clone CH230-471C8, *** SEQUENCI...    36   6.0    5
(EJ836094) 1093017634811 Global-Ocean-Sampling_GS-30-02-01-1...    38   6.2    2
(EJ873176) 1093018355965 Global-Ocean-Sampling_GS-30-02-01-1...    40   6.2    2
(EJ856390) 1093017944727 Global-Ocean-Sampling_GS-30-02-01-1...    40   6.2    2
(EJ989272) 1093023034947 Global-Ocean-Sampling_GS-30-02-01-1...    40   6.3    2
(BX936290) Zebrafish DNA sequence from clone DKEY-188L8 in l...    36   6.4    3
(AC192815) Pan troglodytes BAC clone CH251-56H1 from chromos...    34   6.4    3
(EJ622811) 1092963098364 Global-Ocean-Sampling_GS-29-01-01-1...    36   6.4    2
(AC068381) Homo sapiens chromosome 18 clone RP11-133O18 map ...    34   6.6    6
(ER330616) 1092344255653 Global-Ocean-Sampling_GS-34-01-01-1...    40   6.7    2
(AC034266) Homo sapiens chromosome 17 clone RP11-68P7 map 17...    40   6.8    3
(AC206101) MACACA MULATTA BAC clone CH250-104F6 from chromos...    32   6.8    4
(AL136998) Mouse DNA sequence from clone RP21-509E24 on chro...    34   6.8    4
(AL035476) Plasmodium falciparum MAL4P3.                           40   6.9    7
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    32   6.9    10
(AC140036) Mus musculus chromosome 3 clone RP23-350E24 map 3...    42   6.9    2
(AX344570) Sequence 21 from Patent WO0200932.                      32   6.9    7
(AC118979) Rattus norvegicus clone CH230-313J16, *** SEQUENC...    36   7.0    3
(CR382400) Plasmodium falciparum chromosome 6, complete sequ...    32   7.1    8
(AC084736) Homo sapiens chromosome 8, clone RP11-473A17, com...    42   7.4    3
(U11716) Pisum sativum disease resistance response protein 2...    32   7.4    3
(AC204781) Strongylocentrotus purpuratus clone CS-178508, WO...    42   7.4    4
(AC083825) Homo sapiens chromosome 3 clone RP11-208N8, WORKI...    36   7.5    6
(AC126105) Rattus norvegicus clone CH230-50O1, *** SEQUENCIN...    36   7.5    5
(AC179054) Strongylocentrotus purpuratus clone R3-4005I14, W...    36   7.6    5
(AC157472) Medicago truncatula chromosome 7 clone mth2-41h16...    36   7.6    5
(AC181643) Strongylocentrotus purpuratus clone R3-1103B10, W...    34   7.6    5
(AC146500) Danio rerio clone CH211-130P22, complete sequence.      36   7.7    5
(CU571268) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   7.7    2
(AC212947) Equus caballus clone CH241-495M7, WORKING DRAFT S...    32   7.7    2
(CU570909) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   7.8    2
(CT573456) Zebrafish DNA sequence from clone CH211-190P6 in ...    30   7.9    2
(AC146736) Otolemur garnettii clone CH256-480E9, WORKING DRA...    38   8.0    4
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    34   8.0    9
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g...    32   8.1    11
(AC022455) Arabidopsis thaliana chromosome 1 BAC T1P2 genomi...    34   8.4    5
(CP000728) Clostridium botulinum F str. Langeland, complete ...    34   8.4    13
(AC019235) Homo sapiens BAC clone RP11-665C14 from 4, comple...    38   8.5    3
(FJ429367) Carica papaya clone 55B21, *** SEQUENCING IN PROG...    38   8.6    3
(AP001683) Homo sapiens genomic DNA, chromosome 21q, section...    40   8.7    4
(AM458700) Vitis vinifera, whole genome shotgun sequence, co...    32   8.8    5
(AG320608) Mus musculus molossinus DNA, clone:MSMg01-106I20....    36   8.8    2
(AC109900) Rattus norvegicus clone CH230-287E4, *** SEQUENCI...    36   9.0    3
(AC125817) Rattus norvegicus clone CH230-2N21, WORKING DRAFT...    32   9.1    8
(AC214597) Populus trichocarpa clone POP037-E17, complete se...    36   9.1    4
(AL844509) Plasmodium falciparum chromosome 13.                    36   9.2    12
(AL808032) BAC 30B15 of library A from Tetraodon nigroviridis.     40   9.2    2
(BX571952) Zebrafish DNA sequence from clone DKEY-35E8 in li...    32   9.3    5
(CU137662) Medicago truncatula chromosome 5 clone mth2-155l8...    36   9.4    2
(AL133285) Human DNA sequence *** SEQUENCING CANCELLED *** f...    40   9.5    2
(AC184983) Bos taurus clone CH240-282A11, WORKING DRAFT SEQU...    36   9.5    3
(AL391297) Human DNA sequence from clone RP4-598G3 on chromo...    40   9.5    2
(AL954698) Zebrafish DNA sequence from clone CH211-233B16 in...    36   9.5    5
(AM465197) Vitis vinifera contig VV78X109389.2, whole genome...    30   9.6    2
(AC147975) Pan troglodytes BAC clone CH251-510J15 from chrom...    40   9.9    5
(AP006431) Lotus japonicus genomic DNA, chromosome 5, clone:...    36   10.0   2

>(AU071979) Dictyostelium discoideum slug cDNA, clone SSC886.
          Length = 240

 Score =  476 bits (240), Expect = e-130
 Identities = 240/240 (100%)
 Strand = Plus / Plus


Query: 1   aacagaagcaaaaacagaaatgtcatctaaaattataaaagaaaataaaagacttgtttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aacagaagcaaaaacagaaatgtcatctaaaattataaaagaaaataaaagacttgtttt 60


Query: 61  agatttatataaaagatgtttatattcagcaaaaaggtgtccaaaatatcagaatcaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agatttatataaaagatgtttatattcagcaaaaaggtgtccaaaatatcagaatcaaat 120


Query: 121 gatgatggaatcatatattaaattaaaatttagatcaaataaagaaattcaccaaaaaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgatggaatcatatattaaattaaaatttagatcaaataaagaaattcaccaaaaaga 180


Query: 181 tttcgaaacaattgaaaaccttcttaaacaaggtgaagaagaattaaaatcaatgaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcgaaacaattgaaaaccttcttaaacaaggtgaagaagaattaaaatcaatgaatga 240

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 640,945,219
Number of extensions: 44950951
Number of successful extensions: 4426312
Number of sequences better than 10.0: 317
Length of query: 428
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 405
Effective length of database: 99,442,330,388
Effective search space: 40274143807140
Effective search space used: 40274143807140
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.31
Homology vs Protein 
Query= Contig-U04794-1 (Contig-U04794-1Q) /CSM_Contig/Contig-U04794-1Q.Seq.d
         (428 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU928170_646(CU928170|pid:none) Kluyveromyces thermotolerans str...    46   5e-04
(Q9US02) RecName: Full=Uncharacterized protein C664.12c, mitocho...    44   0.001
AM270414_10(AM270414|pid:none) Aspergillus niger contig An18c022...    44   0.001
CR382125_109(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    42   0.007
CU928179_174(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    40   0.020
(A6ZYX9) RecName: Full=Uncharacterized mitochondrial protein YDR...    40   0.026
BT080626_1(BT080626|pid:none) Caligus clemensi clone ccle-evs-51...    39   0.058
CR382136_893(CR382136|pid:none) Debaryomyces hansenii chromosome...    37   0.17
CR380947_125(CR380947|pid:none) Candida glabrata strain CBS138 c...    37   0.22
AC003000_3(AC003000|pid:none) Arabidopsis thaliana chromosome 2 ...    37   0.22
(A7GKJ1) RecName: Full=DNA ligase;          EC=6.5.1.2; AltName:...    37   0.22
FN392319_158(FN392319|pid:none) Pichia pastoris GS115 chromosome...    37   0.22
BC144214_1(BC144214|pid:none) Homo sapiens chromosome 9 open rea...    37   0.29
AE001362_157(AE001362|pid:none) Plasmodium falciparum 3D7 chromo...    36   0.49
E71606(E71606)hypothetical protein PFB0765w - malaria parasite (...    36   0.49
(Q54PT6) RecName: Full=LYR motif-containing protein 5;                 35   0.64
AK097760_1(AK097760|pid:none) Homo sapiens cDNA FLJ40441 fis, cl...    35   1.1
AE002148_3(AE002148|pid:none) Ureaplasma parvum serovar 3 str. A...    34   1.9
Z46608_1(Z46608|pid:none) Drosophila melanogaster bcn92 gene.          33   2.4
(O46098) RecName: Full=Protein bcn92;  &AE014298_354(AE014298|pi...    33   2.4
FM992695_827(FM992695|pid:none) Candida dubliniensis CD36 chromo...    33   3.2
(Q95JR0) Cancer-associated gene 1 protein homolog (CAGE-1).  &AB...    33   3.2
AP008209_354(AP008209|pid:none) Oryza sativa (japonica cultivar-...    33   3.2
CP001393_2580(CP001393|pid:none) Anaerocellum thermophilum DSM 6...    33   4.1
FN357308_25(FN357308|pid:none) Schistosoma mansoni genome sequen...    33   4.1
AL139095_4(AL139095|pid:none) Human DNA sequence from clone RP11...    33   4.1
AE017261_269(AE017261|pid:none) Picrophilus torridus DSM 9790, c...    32   5.4
AB169153_1(AB169153|pid:none) Macaca fascicularis testis cDNA, c...    32   5.4
T19375(T19375)hypothetical protein C17H1.8 - Caenorhabditis eleg...    32   5.4
AB303687_1(AB303687|pid:none) Hypophthalmichthys molitrix MYH sc...    32   5.4
CT005258_23(CT005258|pid:none) Leishmania major strain Friedlin,...    32   5.4
AF064760_1(AF064760|pid:none) Streptochaeta angustifolia DNA-dir...    32   5.4
CP001357_708(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ...    32   5.4
Z92777_8(Z92777|pid:none) Caenorhabditis elegans Cosmid C17H1, c...    32   5.4
CP001567_34(CP001567|pid:none) Borrelia burgdorferi Bol26 plasmi...    32   5.4
AY341863_4(AY341863|pid:none) Borrelia burgdorferi plasmid bbk50...    32   5.4
FM992693_87(FM992693|pid:none) Candida dubliniensis CD36 chromos...    32   5.4
AB070045_1(AB070045|pid:none) Macaca fascicularis testis cDNA cl...    32   5.4
CP001129_815(CP001129|pid:none) Streptococcus equi subsp. zooepi...    32   7.1
AJ243770_1(AJ243770|pid:none) Paracirrhites forsteri mRNA for fa...    32   7.1
FM204884_1127(FM204884|pid:none) Streptococcus equi subsp. zooep...    32   7.1
CR940347_395(CR940347|pid:none) Theileria annulata strain Ankara...    32   7.1
(A2XDY1) RecName: Full=MADS-box transcription factor 1; AltName:...    32   7.1
Z92777_7(Z92777|pid:none) Caenorhabditis elegans Cosmid C17H1, c...    32   7.1
FM178799_1(FM178799|pid:none) Phycomyces blakesleeanus madB gene...    32   7.1
BC094096_1(BC094096|pid:none) Xenopus laevis hypothetical protei...    32   9.2
BA000023_1412(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,...    32   9.2
CP001146_1629(CP001146|pid:none) Dictyoglomus thermophilum H-6-1...    32   9.2
(Q9PNB8) RecName: Full=Guanylate kinase;          EC=2.7.4.8; Al...    32   9.2
CP001357_1760(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    32   9.2
AL844504_62(AL844504|pid:none) Plasmodium falciparum 3D7 chromos...    32   9.2

>CU928170_646(CU928170|pid:none) Kluyveromyces thermotolerans strain
           CBS6340 chromosome F complete sequence.
          Length = 79

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 23/61 (37%), Positives = 40/61 (65%)
 Frame = +2

Query: 47  KRLVLDLYKRCLYSAKRCPKYQNQMMMESYIKLKFRSNKEIHQKDFETIENLLKQGEEEL 226
           +R VL +Y++C+ +A   PK  NQ    ++I+ +FR  +++ +KDF TIE+LL+ G   L
Sbjct: 9   QREVLQMYRQCIRAAHDKPK-ANQPNFVTHIRKEFRQYQDLPRKDFSTIEHLLRVGHRRL 67

Query: 227 K 229
           +
Sbjct: 68  E 68

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 411,550,697
Number of extensions: 6171865
Number of successful extensions: 23720
Number of sequences better than 10.0: 51
Number of HSP's gapped: 23679
Number of HSP's successfully gapped: 51
Length of query: 142
Length of database: 1,061,185,681
Length adjustment: 105
Effective length of query: 37
Effective length of database: 717,998,641
Effective search space: 26565949717
Effective search space used: 26565949717
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
PSORT 

 psg: 0.40  gvh: 0.41  alm: 0.59  top: 0.53  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for Contig-U04794-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0