Contig-U04791-1
Contig ID Contig-U04791-1
Contig update 2002. 9.13
Contig sequence
>Contig-U04791-1 (Contig-U04791-1Q) /CSM_Contig/Contig-U04791-1Q.Seq.d
ACAATACTGTCATATTTTAATAATTATAATAATAATAATAAATTATTATT
ATTTTATTATTATTATTTTTTTTTTTAATATATTTTTAGTTATTAAATAA
AAAATAAAAAATAAAAAAAAATTAAAAATTTCCCATTTTCCCATTTTCTC
AAGAACAATAATAATATTAATAATAA

Gap no gap
Contig length 176
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 4111000
End point 4110824
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U04791
List of clone(s)

est1=SSC870F,1,177
Translated Amino Acid sequence
QYCHILIIIIIIINYYYFIIIIFFFNIFLVIK*kiknkkklkishfpifsrtiiilii


Translated Amino Acid sequence (All Frames)
Frame A:
tilsyfnnynnnnklllfyyyyfff*yifsy*iknkk*kkiknfpfshflknnnninn


Frame B:
QYCHILIIIIIIINYYYFIIIIFFFNIFLVIK*kiknkkklkishfpifsrtiiilii


Frame C:
ntvif**l*****iiiillllfffliyf*llnkk*kikkn*kfpifpfsqeq**y***


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04791-1 (Contig-U04791-1Q)
/CSM_Contig/Contig-U04791-1Q.Seq.d
(176 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04791-1 (Contig-U04791-1Q) /CSM_Contig/Conti... 96 1e-20
Contig-U14435-1 (Contig-U14435-1Q) /CSM_Contig/Conti... 46 1e-05
Contig-U14434-1 (Contig-U14434-1Q) /CSM_Contig/Conti... 46 1e-05
Contig-U12248-1 (Contig-U12248-1Q) /CSM_Contig/Conti... 46 1e-05
Contig-U02001-1 (Contig-U02001-1Q) /CSM_Contig/Conti... 46 1e-05
Contig-U01210-1 (Contig-U01210-1Q) /CSM_Contig/Conti... 46 1e-05
Contig-U05178-1 (Contig-U05178-1Q) /CSM_Contig/Conti... 44 5e-05
Contig-U14273-1 (Contig-U14273-1Q) /CSM_Contig/Conti... 42 2e-04
Contig-U13711-1 (Contig-U13711-1Q) /CSM_Contig/Conti... 38 0.003
Contig-U12605-1 (Contig-U12605-1Q) /CSM_Contig/Conti... 36 0.012

>Contig-U04791-1 (Contig-U04791-1Q) /CSM_Contig/Contig-U04791-1Q.Seq.d
Length = 176

Score = 95.6 bits (48), Expect = 1e-20
Identities = 48/48 (100%)
Strand = Plus / Plus


Query: 129 tttcccattttcccattttctcaagaacaataataatattaataataa 176
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tttcccattttcccattttctcaagaacaataataatattaataataa 176


>Contig-U14435-1 (Contig-U14435-1Q) /CSM_Contig/Contig-U14435-1Q.Seq.d
Length = 619

Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 154 aacaataataatattaataataa 176
|||||||||||||||||||||||
Sbjct: 479 aacaataataatattaataataa 501


Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 157 aataataatattaataataa 176
||||||||||||||||||||
Sbjct: 494 aataataatattaataataa 513


Score = 38.2 bits (19), Expect = 0.003
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 154 aacaataataatattaataataa 176
||||||||||||| |||||||||
Sbjct: 560 aacaataataataataataataa 582


>Contig-U14434-1 (Contig-U14434-1Q) /CSM_Contig/Contig-U14434-1Q.Seq.d
Length = 492

Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 154 aacaataataatattaataataa 176
|||||||||||||||||||||||
Sbjct: 299 aacaataataatattaataataa 321


Score = 34.2 bits (17), Expect = 0.046
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 159 taataatattaataata 175
|||||||||||||||||
Sbjct: 253 taataatattaataata 269


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3336
Number of Sequences: 6905
Number of extensions: 3336
Number of successful extensions: 1771
Number of sequences better than 10.0: 621
length of query: 176
length of database: 5,674,871
effective HSP length: 15
effective length of query: 161
effective length of database: 5,571,296
effective search space: 896978656
effective search space used: 896978656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 7. 1
Homology vs DNA
Query= Contig-U04791-1 (Contig-U04791-1Q) /CSM_Contig/Contig-U04791-1Q.Seq.d
(176 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU071969) Dictyostelium discoideum slug cDNA, clone SSC870. 96 5e-16 1
(AC209042) Populus trichocarpa clone POP052-O09, complete se... 56 4e-04 1
(AL929172) Zebrafish DNA sequence from clone DKEYP-46C10 in ... 52 0.007 1
(AC025029) Homo sapiens 3 BAC RP11-442C9 (Roswell Park Cance... 52 0.007 1
(EY352528) CAWZ18869.rev CAWZ Helobdella robusta Primary Lat... 52 0.007 1
(EY305194) CAWX19233.rev CAWX Helobdella robusta Primary Ear... 52 0.007 1
(CU104756) Zebrafish DNA sequence from clone DKEY-232D5 in l... 48 0.10 1
(BX511067) Zebrafish DNA sequence from clone DKEYP-29G6 in l... 48 0.10 1
(AC130264) Rattus norvegicus clone CH230-134H3, *** SEQUENCI... 48 0.10 1
(AC127662) Rattus norvegicus clone CH230-22C11, *** SEQUENCI... 48 0.10 1
(AC177737) Strongylocentrotus purpuratus clone R3-1008I23, W... 48 0.10 1
(ED294966) AUAC-aak73f05.g1 Ascaris suum whole genome shotgu... 48 0.10 1
(BJ091491) Xenopus laevis cDNA clone:XL097f05, 3' end, singl... 48 0.10 1
(EV415672) 210749160 NGP Nasonia giraulti cDNA clone 130I11 ... 44 0.21 2
(ES617688) NGPBZ89TR NGPA Nasonia giraulti cDNA, mRNA sequence. 44 0.23 2
(EV415100) 210744552 NGP Nasonia giraulti cDNA clone 130I11 ... 44 0.24 2
(FP016105) Zebrafish DNA sequence from clone CH73-151N6 in l... 46 0.41 1
(CU929244) Zebrafish DNA sequence from clone CH73-78K15 in l... 46 0.41 1
(CU929154) Zebrafish DNA sequence from clone CH73-329G8 in l... 46 0.41 1
(CU928072) Zebrafish DNA sequence from clone CH73-383L1 in l... 46 0.41 1
(CU927890) Zebrafish DNA sequence from clone CH73-356L14 in ... 46 0.41 1
(CU915283) Zebrafish DNA sequence from clone CH1073-215B15 i... 46 0.41 1
(CU896667) Zebrafish DNA sequence from clone CH211-287I18 in... 46 0.41 1
(CU861474) Zebrafish DNA sequence from clone CH73-129N15 in ... 46 0.41 1
(CU855854) Zebrafish DNA sequence from clone CH73-116B16 in ... 46 0.41 1
(CU855685) Zebrafish DNA sequence from clone CH211-172E9 in ... 46 0.41 1
(CU694755) Zebrafish DNA sequence from clone CH1073-458H17 i... 46 0.41 1
(CU694373) Zebrafish DNA sequence from clone CH73-334D15 in ... 46 0.41 1
(CU694269) Zebrafish DNA sequence from clone CH73-169F6 in l... 46 0.41 1
(CU694264) Zebrafish DNA sequence from clone CH73-200O13 in ... 46 0.41 1
(CU683892) Zebrafish DNA sequence from clone ZFOS-335G10 in ... 46 0.41 1
(CU658285) Zebrafish DNA sequence from clone CH73-345H12 in ... 46 0.41 1
(CU611049) Zebrafish DNA sequence from clone CH1073-158H13 i... 46 0.41 1
(CU607104) Zebrafish DNA sequence from clone CH211-111G18 in... 46 0.41 1
(CU571403) Zebrafish DNA sequence from clone DKEY-96J1 in li... 46 0.41 1
(CU467833) Zebrafish DNA sequence from clone CH211-46B8 in l... 46 0.41 1
(CU462859) Zebrafish DNA sequence from clone CH211-245K15 in... 46 0.41 1
(CU179747) Zebrafish DNA sequence from clone CH211-129C2. 46 0.41 1
(CU075912) Zebrafish DNA sequence from clone CH73-34P21 in l... 46 0.41 1
(CU041323) Zebrafish DNA sequence from clone CH73-338M18 in ... 46 0.41 1
(CU012054) Zebrafish DNA sequence from clone DKEYP-117D7 in ... 46 0.41 1
(CT737186) Zebrafish DNA sequence from clone DKEY-271J14 in ... 46 0.41 1
(CT485611) Zebrafish DNA sequence from clone CH73-134I10 in ... 46 0.41 1
(CT027814) Zebrafish DNA sequence from clone CH211-195E10 in... 46 0.41 1
(CT027703) Zebrafish DNA sequence from clone CH211-268L2 in ... 46 0.41 1
(CT027674) Zebrafish DNA sequence from clone CH211-57L19 in ... 46 0.41 1
(CR974456) Zebrafish DNA sequence from clone CH73-253J10 in ... 46 0.41 1
(CR932397) Zebrafish DNA sequence from clone CH211-123E19 in... 46 0.41 1
(CR926457) Zebrafish DNA sequence from clone DKEY-164F21 in ... 46 0.41 1
(CR925753) Zebrafish DNA sequence from clone CH211-222B21 in... 46 0.41 1
(CR925728) Zebrafish DNA sequence from clone DKEY-96G2 in li... 46 0.41 1
(CR855397) Zebrafish DNA sequence from clone CH73-77E20 in l... 46 0.41 1
(CR848821) Zebrafish DNA sequence from clone CH211-210H15. 46 0.41 1
(CR848021) Zebrafish DNA sequence from clone DKEY-219E21 in ... 46 0.41 1
(CR847968) Zebrafish DNA sequence from clone CH211-203D7 in ... 46 0.41 1
(CR788293) Zebrafish DNA sequence from clone DKEYP-3E1 in li... 46 0.41 1
(CR762470) Zebrafish DNA sequence from clone DKEY-12N16 in l... 46 0.41 1
(CR759878) Zebrafish DNA sequence from clone DKEY-219F18 in ... 46 0.41 1
(CR678270) Zebrafish DNA sequence from clone CH211-233O14 in... 46 0.41 1
(CR513784) Zebrafish DNA sequence from clone CH211-286B4 in ... 46 0.41 1
(CR450847) Zebrafish DNA sequence from clone CH211-235J21 in... 46 0.41 1
(CR450803) Zebrafish DNA sequence from clone DKEY-11O18 in l... 46 0.41 1
(CR392043) Zebrafish DNA sequence from clone CH211-94N14 in ... 46 0.41 1
(CR391934) Zebrafish DNA sequence from clone DKEY-279E7 in l... 46 0.41 1
(CR388191) Zebrafish DNA sequence from clone DKEY-110I10 in ... 46 0.41 1
(CR381687) Zebrafish DNA sequence from clone DKEY-283C16 in ... 46 0.41 1
(CR376733) Zebrafish DNA sequence from clone DKEY-189O24 in ... 46 0.41 1
(CR361563) Zebrafish DNA sequence from clone CH211-254L20 in... 46 0.41 1
(CR361549) Zebrafish DNA sequence from clone CH211-241I6 in ... 46 0.41 1
(CR354430) Zebrafish DNA sequence from clone CH211-218P2 in ... 46 0.41 1
(CR352286) Zebrafish DNA sequence from clone CH211-93A20 in ... 46 0.41 1
(CR318640) Zebrafish DNA sequence from clone CH211-243M5 in ... 46 0.41 1
(CR293522) Zebrafish DNA sequence from clone DKEY-29I3 in li... 46 0.41 1
(BX957359) Zebrafish DNA sequence from clone DKEY-234E8 in l... 46 0.41 1
(BX957294) Zebrafish DNA sequence from clone DKEY-187I15 in ... 46 0.41 1
(BX957260) Zebrafish DNA sequence from clone DKEY-1N7 in lin... 46 0.41 1
(BX957258) Zebrafish DNA sequence from clone DKEY-285J17 in ... 46 0.41 1
(BX927240) Zebrafish DNA sequence from clone DKEY-16N13 in l... 46 0.41 1
(BX927175) Zebrafish DNA sequence from clone CH211-237C7 in ... 46 0.41 1
(BX901898) Zebrafish DNA sequence from clone DKEY-148E3 in l... 46 0.41 1
(BX897729) Zebrafish DNA sequence from clone DKEY-240A12 in ... 46 0.41 1
(BX842687) Zebrafish DNA sequence from clone DKEY-97L11 in l... 46 0.41 1
(BX663614) Zebrafish DNA sequence from clone DKEY-148L2 in l... 46 0.41 1
(BX663494) Zebrafish DNA sequence from clone CH211-234N7 in ... 46 0.41 1
(BX649596) Zebrafish DNA sequence from clone CH211-69P4 in l... 46 0.41 1
(BX649568) Zebrafish DNA sequence from clone CH211-122A20 in... 46 0.41 1
(BX629346) Zebrafish DNA sequence from clone DKEY-16N21 in l... 46 0.41 1
(BX571850) Zebrafish DNA sequence from clone DKEY-259L18 in ... 46 0.41 1
(BX571724) Zebrafish DNA sequence from clone CH211-165B19 in... 46 0.41 1
(BX539346) Zebrafish DNA sequence from clone DKEYP-73G7 in l... 46 0.41 1
(BX537273) Zebrafish DNA sequence from clone CH211-151F2 in ... 46 0.41 1
(BX511264) Zebrafish DNA sequence from clone DKEY-31O6 in li... 46 0.41 1
(BX511113) Zebrafish DNA sequence from clone DKEY-38J10 in l... 46 0.41 1
(BX510929) Zebrafish DNA sequence from clone CH211-261F9. 46 0.41 1
(BX510302) Zebrafish DNA sequence from clone RP71-81M21. 46 0.41 1
(BX470222) Zebrafish DNA sequence from clone DKEYP-120F10 in... 46 0.41 1
(BX470176) Zebrafish DNA sequence from clone CH211-120C23 in... 46 0.41 1
(BX470175) Zebrafish DNA sequence from clone DKEY-228K17 in ... 46 0.41 1
(BX470146) Zebrafish DNA sequence from clone DKEY-126D11 in ... 46 0.41 1
(BX465868) Zebrafish DNA sequence from clone DKEY-42I9 in li... 46 0.41 1
(BX465184) Zebrafish DNA sequence from clone DKEY-20N10 in l... 46 0.41 1
(BX324137) Zebrafish DNA sequence from clone CH211-42A2 in l... 46 0.41 1
(BX323600) Zebrafish DNA sequence from clone CH211-234C2 in ... 46 0.41 1
(BX322662) Zebrafish DNA sequence from clone CH211-222C18 in... 46 0.41 1
(BX294162) Zebrafish DNA sequence from clone CH211-270C5 in ... 46 0.41 1
(BX284621) Zebrafish DNA sequence from clone CH211-207N6. 46 0.41 1
(BX255915) Zebrafish DNA sequence from clone CH211-245L1 in ... 46 0.41 1
(BX248387) Zebrafish DNA sequence from clone CH211-231O6 in ... 46 0.41 1
(BX247882) Zebrafish DNA sequence from clone CH211-224P3 in ... 46 0.41 1
(BX088699) Zebrafish DNA sequence from clone CH211-192K19 in... 46 0.41 1
(BX088581) Zebrafish DNA sequence from clone CH211-209H6 in ... 46 0.41 1
(BX005474) Zebrafish DNA sequence from clone CH211-141E22 in... 46 0.41 1
(BX005436) Zebrafish DNA sequence from clone DKEY-9A8 in lin... 46 0.41 1
(BX005349) Zebrafish DNA sequence from clone DKEY-111D8 in l... 46 0.41 1
(BX005323) Zebrafish DNA sequence from clone DKEY-11F12 in l... 46 0.41 1
(BX005310) Zebrafish DNA sequence from clone CH211-214J2 in ... 46 0.41 1
(BX005306) Zebrafish DNA sequence from clone DKEY-78C7 in li... 46 0.41 1
(BX005229) Zebrafish DNA sequence from clone DKEY-21D17 in l... 46 0.41 1
(BX005082) Zebrafish DNA sequence from clone DKEY-148A17 in ... 46 0.41 1
(BX004819) Zebrafish DNA sequence from clone CH211-208B16 in... 46 0.41 1
(BX001057) Zebrafish DNA sequence from clone CH211-89G13 in ... 46 0.41 1
(BX001056) Zebrafish DNA sequence from clone CH211-15P9 in l... 46 0.41 1
(BC065688) Danio rerio RNA binding motif protein 35B, mRNA (... 46 0.41 1
(BC045439) Danio rerio RNA binding motif protein 35B, mRNA (... 46 0.41 1
(AL974310) Zebrafish DNA sequence from clone DKEY-14J6. 46 0.41 1
(AL954688) Zebrafish DNA sequence from clone CH211-212L1 in ... 46 0.41 1
(AL935300) Zebrafish DNA sequence from clone CH211-241E1 in ... 46 0.41 1
(AL929183) Zebrafish DNA sequence from clone CH211-142M8 in ... 46 0.41 1
(AL929090) Zebrafish DNA sequence from clone CH211-14A14 in ... 46 0.41 1
(AL928892) Zebrafish DNA sequence from clone DKEY-216E6. 46 0.41 1
(AL807829) Zebrafish DNA sequence from clone CH211-246M4 in ... 46 0.41 1
(BV976590) pRRL2:Newb:20080411:356917 USMARC Pig Breed SNP D... 46 0.41 1
(BV593098) G591P54329RA6.T0 Clint Pan troglodytes verus STS ... 46 0.41 1
(BV585412) G591P629214FE2.T0 Clint Pan troglodytes verus STS... 46 0.41 1
(BV584840) G591P627556RE10.T0 Clint Pan troglodytes verus ST... 46 0.41 1
(BV581744) G591P620408RH8.T0 Clint Pan troglodytes verus STS... 46 0.41 1
(X66853) M.musculus (clone D11PAS5) microsatellite DNA. 46 0.41 1
(AL929071) Mouse DNA sequence from clone RP24-450M24 on chro... 46 0.41 1
(AL732365) Mouse DNA sequence from clone RP23-357O2 on chrom... 46 0.41 1
(AC163199) Mus musculus 6 BAC RP23-333F8 (Roswell Park Cance... 46 0.41 1
(AC132910) Mus musculus chromosome 17, clone RP24-301I14, co... 46 0.41 1
(AC123558) Mus musculus BAC clone RP23-336N16 from chromosom... 46 0.41 1
(AC122389) Mus musculus BAC clone RP24-80N23 from 16, comple... 46 0.41 1
(AC121136) Mus musculus chromosome 8, clone RP23-339I14, com... 46 0.41 1
(AC105976) Mus musculus chromosome 5, clone RP24-315H14, com... 46 0.41 1
(AC200443) Pongo abelii BAC clone CH276-137H12 from chromoso... 46 0.41 1
(AC187622) Pan troglodytes BAC clone CH251-480J2 from chromo... 46 0.41 1
(AC155321) Pan troglodytes BAC clone CH251-489N11 from chrom... 46 0.41 1
(EU325896) Poncirus trifoliata F-box protein mRNA, complete ... 46 0.41 1
(AP011072) Solanum lycopersicum DNA, chromosome 8, clone: C0... 46 0.41 1
(AM484493) Vitis vinifera contig VV78X208899.7, whole genome... 46 0.41 1
(AM481251) Vitis vinifera contig VV78X119952.4, whole genome... 46 0.41 1
(AM443238) Vitis vinifera contig VV78X259255.5, whole genome... 46 0.41 1
(AM443065) Vitis vinifera contig VV78X034793.5, whole genome... 46 0.41 1
(AM442802) Vitis vinifera, whole genome shotgun sequence, co... 46 0.41 1
(AM442061) Vitis vinifera contig VV78X087658.7, whole genome... 46 0.41 1
(AM430215) Vitis vinifera contig VV78X208105.6, whole genome... 46 0.41 1
(AX112153) Sequence 5 from Patent WO0127287. 46 0.41 1
(AR302165) Sequence 5 from patent US 6541202. 46 0.41 1
(FM160648) Trypanosoma brucei TREU927 BAC26D11 sequence, str... 46 0.41 1
(DQ503422) Plasmodium mexicanum clone Pmx308 microsatellite ... 46 0.41 1
(AY878843) Plasmodium falciparum isolate W2 hypothetical pro... 46 0.41 1
(AY878842) Plasmodium falciparum isolate MUZ12 hypothetical ... 46 0.41 1
(AY878841) Plasmodium falciparum isolate HB3 hypothetical pr... 46 0.41 1
(AY878840) Plasmodium falciparum isolate D6 hypothetical pro... 46 0.41 1
(AY878839) Plasmodium falciparum isolate 3D7 hypothetical pr... 46 0.41 1
(AY878838) Plasmodium falciparum isolate KF1776 hypothetical... 46 0.41 1
(AY191012) Dictyostelium discoideum autophagy protein 5 (apg... 46 0.41 1
(AL929355) Plasmodium falciparum strain 3D7, chromosome 9; s... 46 0.41 1
(AC159443) Trypanosoma brucei chromosome 5 clone RPCI93-30H1... 46 0.41 1
(AC159436) Trypanosoma brucei chromosome 5 clone RPCI93-29K2... 46 0.41 1
(AC117082) Dictyostelium discoideum chromosome 2 map complem... 46 0.41 1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 46 0.41 1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 46 0.41 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 0.41 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 46 0.41 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 46 0.41 1
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 46 0.41 1
(AL596451) Human DNA sequence from clone RP11-75C9 on chromo... 46 0.41 1
(AL359732) Human DNA sequence from clone RP11-450B15 on chro... 46 0.41 1
(AL078593) Human DNA sequence from clone RP1-210B1 on chromo... 46 0.41 1
(AC026204) Homo sapiens chromosome 3 clone RP11-590A20 map 3... 46 0.41 1
(AC026184) Homo sapiens chromosome 3 clone RP11-291P21 map 3... 46 0.41 1
(AC018504) Homo sapiens chromosome 3 clone RP11-53E12 map 3p... 46 0.41 1
(AC002499) Human Cosmid g5129s435 from 7q31.3, complete sequ... 46 0.41 1
(AC158959) Mus musculus chromosome 3 clone RP23-321J10 map 3... 46 0.41 1
(AC153096) Ornithorhynchus anatinus clone OA_Bb-96B20, WORKI... 46 0.41 1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 46 0.41 1
(AC107145) Rattus norvegicus clone CH230-106E18, WORKING DRA... 46 0.41 1
(FP236356) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(FP236172) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(FP103058) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(FP102999) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(FP090904) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.41 1
(FP016191) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(FP003599) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU929430) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU929365) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU929336) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU929156) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(CU929047) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU928228) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU915814) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU914774) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU862076) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.41 1
(CU856352) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU855808) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU855777) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU694255) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU694197) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU682767) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU682601) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU681837) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU525318) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CU407082) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.41 1
(CU138522) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CT573411) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CT573235) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CT476818) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(CT025901) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR853288) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(CR847807) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR788315) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(CR759888) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(CR628388) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR394559) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR385032) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR382375) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR354546) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(CR354393) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(CR318594) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 46 0.41 1
(BX901969) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.41 1
(AP003655) Mus musculus genomic DNA, chromosome 16q clone:RP... 46 0.41 1
(AL844509) Plasmodium falciparum chromosome 13. 46 0.41 1
(AL844507) Plasmodium falciparum chromosome 8. 46 0.41 1
(AC209152) Papio anubis clone RP41-181M12, WORKING DRAFT SEQ... 46 0.41 1
(AC204468) Ornithorhynchus anatinus clone OA_Bb-77C24, WORKI... 46 0.41 1
(AC201183) Strongylocentrotus purpuratus clone R3-14O10, WOR... 46 0.41 1
(AC191485) Ornithorhynchus anatinus clone OA_Bb-227M21, WORK... 46 0.41 1
(AC181735) Strongylocentrotus purpuratus clone R3-1037M09, W... 46 0.41 1
(AC181725) Strongylocentrotus purpuratus clone R3-1039D03, W... 46 0.41 1
(AC181102) Strongylocentrotus purpuratus clone R3-3047K03, W... 46 0.41 1
(AC180630) Strongylocentrotus purpuratus clone R3-3090I22, W... 46 0.41 1
(AC180543) Strongylocentrotus purpuratus clone R3-3016G13, W... 46 0.41 1
(AC180079) Strongylocentrotus purpuratus clone R3-4008G24, W... 46 0.41 1
(AC179374) Strongylocentrotus purpuratus clone R3-1101P8, WO... 46 0.41 1
(AC178877) Strongylocentrotus purpuratus clone R3-27F2, WORK... 46 0.41 1
(AC177993) Strongylocentrotus purpuratus clone R3-3051M15, W... 46 0.41 1
(AC176917) Strongylocentrotus purpuratus clone R3-33C4, WORK... 46 0.41 1
(AC176569) Strongylocentrotus purpuratus clone R3-3076O4, WO... 46 0.41 1
(AC176440) Strongylocentrotus purpuratus clone R3-3066P09, W... 46 0.41 1
(AC175949) Strongylocentrotus purpuratus clone R3-3038B20, W... 46 0.41 1
(AC172308) Strongylocentrotus purpuratus clone R3-14N10, WOR... 46 0.41 1
(AC020996) Homo sapiens chromosome 11 clone RP11-311G20 map ... 46 0.41 1
(AK087242) Mus musculus 0 day neonate lung cDNA, RIKEN full-... 46 0.41 1
(AZ932473) 474.dhz99h06.s1 Saccharomyces unisporus NRRL Y-15... 46 0.41 1
(FI133174) CsB10STC_02L16F_860 ends of BAC library of B10 li... 46 0.41 1
(FI071421) CHO_OF7323xf05r1.ab1 CHO_OF7 Nicotiana tabacum ge... 46 0.41 1
(FI066518) CHO_OF7269xb09f1.ab1 CHO_OF7 Nicotiana tabacum ge... 46 0.41 1
(FH697581) CHO_OF5031xb09f1.ab1 CHO_OF5 Nicotiana tabacum ge... 46 0.41 1
(FH515693) CHO_OF4711xc05f2.ab1 CHO_OF4 Nicotiana tabacum ge... 46 0.41 1
(FH346841) CHO_OF4645xj10r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 0.41 1
(FH243537) CHO_OF3122xc09f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 0.41 1
(FH215162) CHO_OF3374xe16f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 0.41 1
(FH072834) CHO_OF3678xm08r1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 0.41 1
(ET863972) CHO_OF192xh08r1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.41 1
(ET730028) CHO_OF151xc02r2.ab1 CHO_OF Nicotiana tabacum geno... 46 0.41 1
(ET729959) CHO_OF151xc02r1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.41 1
(ET729882) CHO_OF151xc02f1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.41 1
(ET714188) CHO_OF096xk20f1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.41 1
(ET705010) CHO_OF088xj15r1.ab1 CHO_OF Nicotiana tabacum geno... 46 0.41 1
(EK327920) 1095467013783 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.41 1
(AL986145) Danio rerio genomic clone DKEY-40H5, genomic surv... 46 0.41 1
(EI874604) CAH1-42H21TR CAA1Ba Cicer arietinum genomic clone... 46 0.41 1
(EI869383) CAH1-35A16TV CAA1Ba Cicer arietinum genomic clone... 46 0.41 1
(EI476053) PV_GBa0086J17.r PV_GBa Phaseolus vulgaris genomic... 46 0.41 1
(ED301939) AUAC-aao81e02.b1 Ascaris suum whole genome shotgu... 46 0.41 1
(DX542221) GH_MBb0070J02f GH_MBb Gossypium hirsutum genomic ... 46 0.41 1
(DX085444) AU_BAC008A1B11_Sp6 CHORI212 Ictalurus punctatus g... 46 0.41 1
(AL322531) Tetraodon nigroviridis genome survey sequence T7 ... 46 0.41 1
(AL260833) Tetraodon nigroviridis genome survey sequence T7 ... 46 0.41 1
(AL190627) Tetraodon nigroviridis genome survey sequence PUC... 46 0.41 1
(DU083638) 279924 Tomato HindIII BAC Library Solanum lycoper... 46 0.41 1
(DH117572) Oryzias latipes Fosmid clone:GOLWFno379_m22, reve... 46 0.41 1
(DE383922) Bombyx mori genomic DNA, BAC clone:5K11H. 46 0.41 1
(DE138336) Oryzias latipes DNA, forward end of BAC clone: Mn... 46 0.41 1
(DE134834) Oryzias latipes DNA, reverse end of BAC clone: Mn... 46 0.41 1
(DE118417) Oryzias latipes DNA, reverse end of BAC clone: Md... 46 0.41 1
(DE115257) Oryzias latipes DNA, forward end of BAC clone: Md... 46 0.41 1
(DE114893) Oryzias latipes DNA, reverse end of BAC clone: Md... 46 0.41 1
(DE112797) Oryzias latipes DNA, forward end of BAC clone: Md... 46 0.41 1
(CT495530) A BAC library has been constructed from cultivar ... 46 0.41 1
(CG807324) 1118080G02.y1 1118 - RescueMu Grid S Zea mays gen... 46 0.41 1
(CG807082) 1118077E03.y1 1118 - RescueMu Grid S Zea mays gen... 46 0.41 1
(CG750045) P044-2-H12.za Ppa EcoRI BAC Library Pristionchus ... 46 0.41 1
(BX233811) Danio rerio genomic clone DKEY-277F7, genomic sur... 46 0.41 1
(AG285943) Mus musculus molossinus DNA, clone:MSMg01-059D09.... 46 0.41 1
(AG103608) Pan troglodytes DNA, clone: PTB-107E08.R. 46 0.41 1
(EL547351) EST_omor_rgc_11304 omorrgc mixed_tissue Osmerus m... 46 0.41 1
(EL540467) EST_omor_rgc_4420 omorrgc mixed_tissue Osmerus mo... 46 0.41 1
(EL539453) EST_omor_rgc_3406 omorrgc mixed_tissue Osmerus mo... 46 0.41 1
(EH608494) FDR306-P00035-DEPE-R_B02 FDR306 Danio rerio cDNA ... 46 0.41 1
(EG348358) SAAH-aab81g11.b1 Agen 0058 Schmidtea mediterranea... 46 0.41 1
(EC854019) HDE00004086 Hyperamoeba dachnaya Non-normalized (... 46 0.41 1
(DY886264) CeleSEQ1847 Cunninghamella elegans pBluescript (E... 46 0.41 1
(DY302321) KN0AAQ2YK07RM1 CitNFL Citrus clementina cDNA 5', ... 46 0.41 1
(DY300323) IC0AAA9DD02RM1 CitNFL Citrus clementina cDNA 5', ... 46 0.41 1
(DY293543) IC0AAA83AD09RM1 CitNFL Citrus clementina cDNA 5',... 46 0.41 1
(DY288464) IC0AAA6CG09RM1 CitNFL Citrus clementina cDNA 5', ... 46 0.41 1
(DY285820) IC0AAA64AF01RM1 CitNFL Citrus clementina cDNA 5',... 46 0.41 1
(DY284501) IC0AAA61CC02RM1 CitNFL Citrus clementina cDNA 5',... 46 0.41 1
(DY280885) IC0AAA52BF11RM1 CitNFL Citrus clementina cDNA 5',... 46 0.41 1
(DY279350) IC0AAA49AF07RM1 CitNFL Citrus clementina cDNA 5',... 46 0.41 1
(DY272961) IC0AAA32CE04RM1 CitNFL Citrus clementina cDNA 5',... 46 0.41 1
(AU266757) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.41 1
(AU052517) Dictyostelium discoideum slug cDNA, clone SLD455. 46 0.41 1
(AU040011) Dictyostelium discoideum slug cDNA, clone SLH436. 46 0.41 1
(AU039114) Dictyostelium discoideum slug cDNA, clone SSM406. 46 0.41 1
(CV717176) UCRCS08_0008I08_f Parent Washington Navel Orange ... 46 0.41 1
(CV448177) EST902086 BEA Rhipicephalus microplus cDNA clone ... 46 0.41 1
(CN215113) 28882 Suspension culture Solanum tuberosum cDNA, ... 46 0.41 1
(CK185159) EST774474 BEA Rhipicephalus microplus cDNA clone ... 46 0.41 1
(CD605854) RK059A4C12.T7 Zebrafish Kidney Marrow cDNA librar... 46 0.41 1
(CB484761) omorlil001075 Osmerus mordax liver Osmerus mordax... 46 0.41 1
(BY880612) Cryptomeria japonica cDNA clone: CMFL008_H11, 5'e... 46 0.41 1
(BY879268) Cryptomeria japonica cDNA clone: CMFL004_N14, 5'e... 46 0.41 1
(BX764700) Xenopus tropicalis EST, clone TGas141b13 3'. 46 0.41 1
(BU709709) fl35h07.x1 Sugano Kawakami zebrafish DRA Danio re... 46 0.41 1
(BU670700) STR00445 26 somite embryos Danio rerio cDNA clone... 46 0.41 1
(BQ739517) PfESToab46h10.y1 Plasmodium falciparum 3D7 asexua... 46 0.41 1
(BP955064) Euphorbia tirucalli mRNA, clone: ETC039E01, 5' end. 46 0.41 1
(BM776737) fy45b03.x1 Sugano SJD adult male Danio rerio cDNA... 46 0.41 1
(BJ440630) Dictyostelium discoideum cDNA clone:ddv44d08, 3' ... 46 0.41 1
(BJ437426) Dictyostelium discoideum cDNA clone:ddv34a07, 3' ... 46 0.41 1
(BJ369770) Dictyostelium discoideum cDNA clone:ddc51o13, 5' ... 46 0.41 1
(BJ369601) Dictyostelium discoideum cDNA clone:ddc51k04, 5' ... 46 0.41 1
(BG728399) fo92b09.x1 zebrafish gridded kidney Danio rerio c... 46 0.41 1
(BG303774) fl35w63.x1 Sugano Kawakami zebrafish DRA Danio re... 46 0.41 1
(AA542446) fa07a06.s1 Zebrafish ICRFzfls Danio rerio cDNA cl... 46 0.41 1
(BB664404) Mus musculus 0 day neonate lung cDNA, RIKEN full-... 46 0.41 1
(BB534676) Mus musculus 0 day neonate lung cDNA, RIKEN full-... 46 0.41 1
(GO216057) CAGB26130.fwd CAGB Alvinella pompejana Normalized... 46 0.41 1
(GO216056) CAGB26130.rev CAGB Alvinella pompejana Normalized... 46 0.41 1
(GO182238) CAGA7516.rev CAGA Alvinella pompejana Normalized ... 46 0.41 1
(GO181430) CAGA714.fwd CAGA Alvinella pompejana Normalized l... 46 0.41 1
(GO181429) CAGA714.rev CAGA Alvinella pompejana Normalized l... 46 0.41 1
(GO170778) CAGA43931.fwd CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO170777) CAGA43931.rev CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO170090) CAGA43610.rev CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO167617) CAGA42448.rev CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO153064) CAGA3561.fwd CAGA Alvinella pompejana Normalized ... 46 0.41 1
(GO153063) CAGA3561.rev CAGA Alvinella pompejana Normalized ... 46 0.41 1
(GO142597) CAGA29964.fwd CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO142596) CAGA29964.rev CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO112001) CAGA15222.rev CAGA Alvinella pompejana Normalized... 46 0.41 1
(GO102561) CAFZ439.fwd CAFZ Alvinella pompejana Incyte regul... 46 0.41 1
(GO102560) CAFZ439.rev CAFZ Alvinella pompejana Incyte regul... 46 0.41 1
(FP110148) Danio rerio EST, clone ZF_invB18l03 3'. 46 0.41 1
(FF079077) G1045P319RA8.T0 Aplysia californica Pooled Normal... 46 0.41 1
(FE745534) CAYC3070.g1 CAYC Petrolisthes cinctipes heart, ne... 46 0.41 1
(FE745533) CAYC3070.b1 CAYC Petrolisthes cinctipes heart, ne... 46 0.41 1
(FE080788) LV_GL_RA01F14f Litopenaeus vannamei gills cDNA li... 46 0.41 1
(FE080787) LV_GL_RA18H08r Litopenaeus vannamei gills cDNA li... 46 0.41 1
(FE080611) LV_GL_RA01L10f Litopenaeus vannamei gills cDNA li... 46 0.41 1
(FE080610) LV_GL_RA18P21r Litopenaeus vannamei gills cDNA li... 46 0.41 1
(FE055184) LV_ES_RA22E16f Litopenaeus vannamei eyestalk cDNA... 46 0.41 1
(FD037792) CBCZ8619.g1 CBCZ: cDNA library made from Channel ... 46 0.41 1
(FD029809) CBCZ2613.g1 CBCZ: cDNA library made from Channel ... 46 0.41 1
(FD029808) CBCZ2613.b1 CBCZ: cDNA library made from Channel ... 46 0.41 1
(FC924230) C31803H09EF StrCleopN Citrus reshni cDNA clone C3... 46 0.41 1
(FC913483) IC0AAA6CG09RM1 IVIA1 Citrus clementina cDNA clone... 46 0.41 1
(FC913168) IC0AAA49AF07RM1 IVIA1 Citrus clementina cDNA clon... 46 0.41 1
(FC909382) IC0AAA9DD02RM1 IVIA1 Citrus clementina cDNA clone... 46 0.41 1
(FC899434) IC0AAA83AD09RM1 IVIA1 Citrus clementina cDNA clon... 46 0.41 1
(FC897131) IC0AAA61CC02RM1 IVIA1 Citrus clementina cDNA clon... 46 0.41 1
(FC894119) IC0AAA52BF11RM1 IVIA1 Citrus clementina cDNA clon... 46 0.41 1
(FC893927) IC0AAA32CE04RM1 IVIA1 Citrus clementina cDNA clon... 46 0.41 1
(FC884279) KN0AAQ2YK07RM1 IVIA1 Citrus clementina cDNA clone... 46 0.41 1
(FC878636) IC0AAA64AF01RM1 IVIA1 Citrus clementina cDNA clon... 46 0.41 1
(FC869074) C31008C04EF AbioticL1 Citrus clementina cDNA clon... 46 0.41 1
(EY706826) CS00-C3-701-061-G08-CT.F Sweet orange fruit, deve... 46 0.41 1
(EY502541) CBBP6425.rev CBBP Hirudo medicinalis hermaphrodit... 46 0.41 1
(EY498557) CBBP4193.rev CBBP Hirudo medicinalis hermaphrodit... 46 0.41 1
(EY495448) CBBP2306.rev CBBP Hirudo medicinalis hermaphrodit... 46 0.41 1
(EY487109) CBBP15603.rev CBBP Hirudo medicinalis hermaphrodi... 46 0.41 1
(EY482936) CBBP12678.rev CBBP Hirudo medicinalis hermaphrodi... 46 0.41 1
(EY383980) CAXA4893.rev CAXA Helobdella robusta Subtracted L... 46 0.41 1
(EY366780) CAXA10909.rev CAXA Helobdella robusta Subtracted ... 46 0.41 1
(EY364141) CAWZ9158.fwd CAWZ Helobdella robusta Primary Late... 46 0.41 1
(EY361886) CAWZ796.rev CAWZ Helobdella robusta Primary Late ... 46 0.41 1
(EY337999) CAWY8714.rev CAWY Helobdella robusta Subtracted E... 46 0.41 1
(EY335255) CAWY6898.fwd CAWY Helobdella robusta Subtracted E... 46 0.41 1
(EY335254) CAWY6898.rev CAWY Helobdella robusta Subtracted E... 46 0.41 1
(EY330390) CAWY3443.fwd CAWY Helobdella robusta Subtracted E... 46 0.41 1
(EY328949) CAWY1970.rev CAWY Helobdella robusta Subtracted E... 46 0.41 1
(EY301371) CAWX15538.fwd CAWX Helobdella robusta Primary Ear... 46 0.41 1
(EY301370) CAWX15538.rev CAWX Helobdella robusta Primary Ear... 46 0.41 1
(EY300400) CAWX15002.rev CAWX Helobdella robusta Primary Ear... 46 0.41 1
(EY299132) CAWX14295.rev CAWX Helobdella robusta Primary Ear... 46 0.41 1
(EX163657) LY_YIT_DP1776 Dermatophagoides pteronyssinus cDNA... 46 0.41 1
(FP102792) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.60 2
(AC036139) Homo sapiens chromosome 17 clone RP11-450I19 map ... 38 0.68 2
(AC207002) Pongo abelii BAC clone CH276-50G22 from chromosom... 40 0.68 2
(AC177413) Strongylocentrotus purpuratus clone R3-1031G04, W... 38 0.80 3
(U13645) Caenorhabditis elegans cosmid C05D10, complete sequ... 36 0.94 2
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 40 1.2 2
(AC176812) Strongylocentrotus purpuratus clone R3-3109O4, WO... 44 1.5 2
(AC180734) Strongylocentrotus purpuratus clone R3-3083M8, WO... 44 1.5 2
(CU929343) Zebrafish DNA sequence from clone CH1073-213I1. 44 1.6 1
(CU927933) Zebrafish DNA sequence from clone CH73-35H3 in li... 44 1.6 1
(CU634005) Zebrafish DNA sequence from clone CH1073-470B2 in... 44 1.6 1
(CU633737) Zebrafish DNA sequence from clone ZFOS-1132D4 in ... 44 1.6 1
(CU468684) Zebrafish DNA sequence from clone CH73-1M8 in lin... 44 1.6 1
(CU468270) Zebrafish DNA sequence from clone CH73-203L12 in ... 44 1.6 1
(CU464184) Zebrafish DNA sequence from clone DKEY-10K21 in l... 44 1.6 1
(CU459185) Zebrafish DNA sequence from clone CH73-167A11 in ... 44 1.6 1
(CU459177) Zebrafish DNA sequence from clone CH73-340G20 in ... 44 1.6 1
(CU459175) Zebrafish DNA sequence from clone CH73-122J5 in l... 44 1.6 1
(CU104725) Zebrafish DNA sequence from clone CH73-64L15 in l... 44 1.6 1
(CU104702) Zebrafish DNA sequence from clone CH1073-351B19 i... 44 1.6 1
(CU041319) Zebrafish DNA sequence from clone CH211-105D1 in ... 44 1.6 1
(CT583714) Zebrafish DNA sequence from clone CH211-101J4. 44 1.6 1
(CT583648) Zebrafish DNA sequence from clone CH211-189E22 in... 44 1.6 1
(CT583626) Zebrafish DNA sequence from clone CH211-180L22 in... 44 1.6 1
(CT574572) Zebrafish DNA sequence from clone CH211-232J10 in... 44 1.6 1
(CT573332) Zebrafish DNA sequence from clone CH73-381F5 in l... 44 1.6 1
(CT573157) Zebrafish DNA sequence from clone CH73-1M18 in li... 44 1.6 1
(CT573048) Zebrafish DNA sequence from clone CH211-95O16 in ... 44 1.6 1
(CT033846) Zebrafish DNA sequence from clone CH211-11G6. 44 1.6 1
(CT030207) Zebrafish DNA sequence from clone CH211-176G6 in ... 44 1.6 1
(CR933779) Zebrafish DNA sequence from clone DKEY-13J5 in li... 44 1.6 1
(CR931959) Zebrafish DNA sequence from clone DKEY-261G17 in ... 44 1.6 1
(CR854948) Zebrafish DNA sequence from clone CH211-142B24. 44 1.6 1
(CR848026) Zebrafish DNA sequence from clone CH211-188C16 in... 44 1.6 1
(CR792431) Zebrafish DNA sequence from clone CH211-285G23 in... 44 1.6 1
(CR788228) Zebrafish DNA sequence from clone CH211-15N4 in l... 44 1.6 1
(CR762420) Zebrafish DNA sequence from clone CH211-243G5. 44 1.6 1
(CR762418) Zebrafish DNA sequence from clone RP71-15A9 in li... 44 1.6 1
(CR759869) Zebrafish DNA sequence from clone DKEY-238F11 in ... 44 1.6 1
(CR753888) Zebrafish DNA sequence from clone CH211-154E10 in... 44 1.6 1
(CR631121) Zebrafish DNA sequence from clone CH211-285M3 in ... 44 1.6 1
(CR626891) Zebrafish DNA sequence from clone DKEY-33P20 in l... 44 1.6 1
(CR548627) Zebrafish DNA sequence from clone DKEYP-24A7 in l... 44 1.6 1
(CR545465) Zebrafish DNA sequence from clone CH211-263P13 in... 44 1.6 1
(CR533570) Zebrafish DNA sequence from clone DKEY-288J18 in ... 44 1.6 1
(CR524826) Zebrafish DNA sequence from clone CH211-227A6 in ... 44 1.6 1
(CR450785) Zebrafish DNA sequence from clone DKEYP-89E4 in l... 44 1.6 1
(CR450692) Zebrafish DNA sequence from clone CH211-198J13 in... 44 1.6 1
(CR391999) Zebrafish DNA sequence from clone CH211-261L7 in ... 44 1.6 1
(CR391919) Zebrafish DNA sequence from clone DKEY-174K18 in ... 44 1.6 1
(CR385083) Zebrafish DNA sequence from clone CH211-142E17 in... 44 1.6 1
(CR385053) Zebrafish DNA sequence from clone DKEY-273G18 in ... 44 1.6 1
(CR385040) Zebrafish DNA sequence from clone DKEYP-101C8 in ... 44 1.6 1
(CR376748) Zebrafish DNA sequence from clone DKEY-7I1 in lin... 44 1.6 1
(CR318632) Zebrafish DNA sequence from clone CH211-113N10 in... 44 1.6 1
(CR318626) Zebrafish DNA sequence from clone DKEY-29L7 in li... 44 1.6 1
(CR318596) Zebrafish DNA sequence from clone DKEY-104N16 in ... 44 1.6 1
(CR293511) Zebrafish DNA sequence from clone DKEY-93H22 in l... 44 1.6 1
(BX957325) Zebrafish DNA sequence from clone CH211-117O2 in ... 44 1.6 1
(BX950226) Zebrafish DNA sequence from clone CH211-105P23 in... 44 1.6 1
(BX928755) Zebrafish DNA sequence from clone DKEY-199C16 in ... 44 1.6 1
(BX927415) Zebrafish DNA sequence from clone CH211-1B13 in l... 44 1.6 1
(BX927362) Zebrafish DNA sequence from clone CH211-170N20 in... 44 1.6 1
(BX927308) Zebrafish DNA sequence from clone DKEY-16M19 in l... 44 1.6 1
(BX927289) Zebrafish DNA sequence from clone DKEY-119F1 in l... 44 1.6 1
(BX927253) Zebrafish DNA sequence from clone DKEY-29J8 in li... 44 1.6 1
(BX927123) Zebrafish DNA sequence from clone CH211-278N15 in... 44 1.6 1
(BX897741) Zebrafish DNA sequence from clone DKEY-273O13 in ... 44 1.6 1
(BX897684) Zebrafish DNA sequence from clone CH211-107A4 in ... 44 1.6 1
(BX855604) Zebrafish DNA sequence from clone CH211-284P4. 44 1.6 1
(BX649643) Zebrafish DNA sequence from clone CH211-125M10 in... 44 1.6 1
(BX649598) Zebrafish DNA sequence from clone CH211-214P12 in... 44 1.6 1
(BX649566) Zebrafish DNA sequence from clone CH211-15I6 in l... 44 1.6 1
(BX649535) Zebrafish DNA sequence from clone DKEY-234E12 in ... 44 1.6 1
(BX649533) Zebrafish DNA sequence from clone DKEY-31K12 in l... 44 1.6 1
(BX649478) Zebrafish DNA sequence from clone DKEY-149F22 in ... 44 1.6 1
(BX649434) Zebrafish DNA sequence from clone CH211-261N9 in ... 44 1.6 1
(BX649370) Zebrafish DNA sequence from clone DKEY-97I11 in l... 44 1.6 1
(BX640507) Zebrafish DNA sequence from clone DKEY-97O1 in li... 44 1.6 1
(BX640464) Zebrafish DNA sequence from clone DKEY-22M8 in li... 44 1.6 1
(BX571715) Zebrafish DNA sequence from clone DKEY-6E3 in lin... 44 1.6 1
(BX571664) Zebrafish DNA sequence from clone DKEYP-82H4 in l... 44 1.6 1
(BX569784) Zebrafish DNA sequence from clone DKEY-166K9 in l... 44 1.6 1
(BX548246) Zebrafish DNA sequence from clone CH211-274P15 in... 44 1.6 1
(BX548171) Zebrafish DNA sequence from clone DKEY-152J20 in ... 44 1.6 1
(BX545913) Zebrafish DNA sequence from clone DKEY-208P1 in l... 44 1.6 1
(BX537265) Zebrafish DNA sequence from clone DKEY-79H4 in li... 44 1.6 1
(BX537134) Zebrafish DNA sequence from clone CH211-205J6 in ... 44 1.6 1
(BX511165) Zebrafish DNA sequence from clone DKEY-22L14 in l... 44 1.6 1
(BX511110) Zebrafish DNA sequence from clone CH211-235L10 in... 44 1.6 1
(BX511081) Zebrafish DNA sequence from clone DKEY-6B12 in li... 44 1.6 1
(BX510659) Zebrafish DNA sequence from clone CH211-151B10 in... 44 1.6 1
(BX470140) Zebrafish DNA sequence from clone CH211-238E6 in ... 44 1.6 1
(BX470128) Zebrafish DNA sequence from clone DKEY-19F21 in l... 44 1.6 1
(BX470095) Zebrafish DNA sequence from clone DKEY-162H1 in l... 44 1.6 1
(BX469923) Zebrafish DNA sequence from clone RP71-3J3 in lin... 44 1.6 1
(BX465199) Zebrafish DNA sequence from clone DKEY-84I7 in li... 44 1.6 1
(BX324181) Zebrafish DNA sequence from clone CH211-203O8 in ... 44 1.6 1
(BX294000) Zebrafish DNA sequence from clone DKEYP-67B10. 44 1.6 1
(BX284666) Zebrafish DNA sequence from clone CH211-190K17 in... 44 1.6 1

>(AU071969) Dictyostelium discoideum slug cDNA, clone SSC870.
Length = 177

Score = 95.6 bits (48), Expect = 5e-16
Identities = 48/48 (100%)
Strand = Plus / Plus


Query: 129 tttcccattttcccattttctcaagaacaataataatattaataataa 176
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tttcccattttcccattttctcaagaacaataataatattaataataa 176

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 97,224,254
Number of extensions: 8481542
Number of successful extensions: 2627520
Number of sequences better than 10.0: 1358
Length of query: 176
Length of database: 101,790,757,118
Length adjustment: 22
Effective length of query: 154
Effective length of database: 99,544,435,898
Effective search space: 15329843128292
Effective search space used: 15329843128292
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.31
Homology vs Protein
Query= Contig-U04791-1 (Contig-U04791-1Q) /CSM_Contig/Contig-U04791-1Q.Seq.d
(176 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 77,558,242
Number of extensions: 335340
Number of successful extensions: 758
Number of sequences better than 10.0: 0
Number of HSP's gapped: 758
Number of HSP's successfully gapped: 0
Length of query: 58
Length of database: 1,061,185,681
Length adjustment: 31
Effective length of query: 27
Effective length of database: 959,863,793
Effective search space: 25916322411
Effective search space used: 25916322411
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 26 (14.6 bits)

PSORT

psg: 1.04 gvh: 0.36 alm: 0.16 top: 0.50 tms: 0.07 mit: 0.33 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 1.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 1.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

28.0 %: endoplasmic reticulum
20.0 %: cytoplasmic
16.0 %: mitochondrial
12.0 %: Golgi
12.0 %: nuclear
8.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U04791-1 is end

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0