Contig-U04734-1
Contig ID Contig-U04734-1
Contig update 2001. 8.29
Contig sequence
>Contig-U04734-1 (Contig-U04734-1Q) /CSM_Contig/Contig-U04734-1Q.Seq.d
ATCGTTATTCGTCAACTGAATCTCCAAAAGAACCAACTAAAATCAAATGT
ATCAATTTAATACTTTGTTCAGTTAAATTGGCTCAAGTAGTTGATCATCC
ACATTGTTTCCAATTGATTACTCCATCAAGAATTTACTTTTTCAGTTGTG
AAGATTCAACTGTACTATTCCAATGGATCTCTTTAATTAGATTATCAATT
AAAAAGAAATTGGAATCTTTGAAAGATGAAAATAATAATATTAATAATTT
CACAAGTATCGCTAGTGCTACCTCTCCAACTTCTTCAAGTAGCAATACTA
CTCCAATAGTTGTACCAATAGCTTCTCATTCAAATGCTACAGGTTCTTTA
TCTGCTTCATTGGGTAGTTCTTTCTTAAATCAACAACAAAGATCTTTAGA
ACAACAACAACATTTAAATACTTCAAATTCAAATTTAACTCCATTAGCTT
TATCTTCACAGGTATTATATCATATTAATAATTTTATATCTACATCTACA
TCTACATCTGCATCACAATCACAATCACAATCACCATCACCTTCACCTTC
ACACTCTATCAATCAAAAACAAAAAATTCGAAAACTATCATTTTATCAAA
GTAGGTCAAATACTCTCATTAATATCAATAATGATGAAGATAGACTGAAT
CCTTTTCCAACTTCTACTCTATCGGTTTCTNGTCTTTTAAATAATGATAN
CCATGGTAATAATGATTTTGATGGTAAACCCTTCCCCAATAATATTGATA
TTCCCCCCCCCACAACTACAAATGGNGNTAATAATAATAATACTACTACT
ACACAAGTCAAAAAGGGGAAGGATTTATCTTGTTCAAAAGAATTAAACTG
TTCTATGNGTCATGATGACAATAGCAAAGGTAGTAGTGGTTCCGGTAATA
ATAGTTGTGGGGATAATTTTAATAATGATGAAAGTTTGGCACAAAAAAAT
TTTAATTCTATAATATCTTTTTTTTTAAGCACAAAAAAATTCATTAAATC
TCCTAAAAGGACTATCTCTACTTCTTTCCTTTTTTCTTAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 1084
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 2405208
End point 2406217
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U04734
List of clone(s)

est1=SSC570E,1,1085
Translated Amino Acid sequence
RYSSTESPKEPTKIKCINLILCSVKLAQVVDHPHCFQLITPSRIYFFSCEDSTVLFQWIS
LIRLSIKKKLESLKDENNNINNFTSIASATSPTSSSSNTTPIVVPIASHSNATGSLSASL
GSSFLNQQQRSLEQQQHLNTSNSNLTPLALSSQVLYHINNFISTSTSTSASQSQSQSPSP
SPSHSINQKQKIRKLSFYQSRSNTLININNDEDRLNPFPTSTLSVSXLLNNDXHGNNDFD
GKPFPNNIDIPPPTTTNGXNNNNTTTTQVKKGKDLSCSKELNCSMXHDDNSKGSSGSGNN
SCGDNFNNDESLAQKNFNSIISFFLSTKKFIKSPKRTISTSFLFS*kkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
ivirqlnlqknqlksnvsi*yfvqlnwlk*liihivsn*llhqeftfsvvkiqlyysngs
l*ldyqlkrnwnl*kmkiiiliisqvslvlplqllqvaillq*lyq*lliqmlqvlyllh
wvvls*innkdl*nnnni*ilqiqi*lh*lylhryyiiliilylhlhlhlhhnhnhnhhh
lhlhtlsiknkkfenyhfikvgqilslisimmkid*ilfqlllyrflvf*imixmvimil
mvnpspiilifpppqlqmxxiiiilllhkskrgriylvqkn*tvlxvmmtiakvvvvpvi
ivvgiilimmkvwhkkilil*ylff*aqknslnllkglslllsfflkkkkkkkkkkkkkk
k


Frame B:
slfvn*iskrtn*nqmyqfntlfs*igsss*sstlfpidysiknllfql*rfnctipmdl
fn*iin*keigifer*k**y**fhkyr*cylsnffk*qyysnsctnsfsfkcyrfficfi
g*fflksttkifrttttfkyfkfkfnsisfiftgiisy**fyiyiyiyicititititit
ftftlyqsktknsktiilsk*vkysh*yq***r*tesfsnfysigfxsfk**xpw***f*
w*tlpq*y*yspphnykwx****yyyytsqkgegfilfkriklfyxs**q*qr**wfr**
*lwg*f****kfgtkkf*fynifffkhkkih*is*kdylyffpfflkkkkkkkkkkkkkk
k


Frame C:
RYSSTESPKEPTKIKCINLILCSVKLAQVVDHPHCFQLITPSRIYFFSCEDSTVLFQWIS
LIRLSIKKKLESLKDENNNINNFTSIASATSPTSSSSNTTPIVVPIASHSNATGSLSASL
GSSFLNQQQRSLEQQQHLNTSNSNLTPLALSSQVLYHINNFISTSTSTSASQSQSQSPSP
SPSHSINQKQKIRKLSFYQSRSNTLININNDEDRLNPFPTSTLSVSXLLNNDXHGNNDFD
GKPFPNNIDIPPPTTTNGXNNNNTTTTQVKKGKDLSCSKELNCSMXHDDNSKGSSGSGNN
SCGDNFNNDESLAQKNFNSIISFFLSTKKFIKSPKRTISTSFLFS*kkkkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04734-1 (Contig-U04734-1Q)
/CSM_Contig/Contig-U04734-1Q.Seq.d
(1084 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04734-1 (Contig-U04734-1Q) /CSM_Contig/Conti... 1721 0.0
Contig-U11191-1 (Contig-U11191-1Q) /CSM_Contig/Conti... 60 5e-09
Contig-U09216-1 (Contig-U09216-1Q) /CSM_Contig/Conti... 52 1e-06
Contig-U13856-1 (Contig-U13856-1Q) /CSM_Contig/Conti... 50 5e-06
Contig-U12801-1 (Contig-U12801-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U11679-1 (Contig-U11679-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U01687-1 (Contig-U01687-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U06209-1 (Contig-U06209-1Q) /CSM_Contig/Conti... 46 8e-05
Contig-U11711-1 (Contig-U11711-1Q) /CSM_Contig/Conti... 44 3e-04
Contig-U12467-1 (Contig-U12467-1Q) /CSM_Contig/Conti... 42 0.001

>Contig-U04734-1 (Contig-U04734-1Q) /CSM_Contig/Contig-U04734-1Q.Seq.d
Length = 1084

Score = 1721 bits (868), Expect = 0.0
Identities = 939/967 (97%)
Strand = Plus / Plus


Query: 1 atcgttattcgtcaactgaatctccaaaagaaccaactaaaatcaaatgtatcaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcgttattcgtcaactgaatctccaaaagaaccaactaaaatcaaatgtatcaatttaa 60


Query: 61 tactttgttcagttaaattggctcaagtagttgatcatccacattgtttccaattgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tactttgttcagttaaattggctcaagtagttgatcatccacattgtttccaattgatta 120


Query: 121 ctccatcaagaatttactttttcagttgtgaagattcaactgtactattccaatggatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccatcaagaatttactttttcagttgtgaagattcaactgtactattccaatggatct 180


Query: 181 ctttaattagattatcaattaaaaagaaattggaatctttgaaagatgaaaataataata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctttaattagattatcaattaaaaagaaattggaatctttgaaagatgaaaataataata 240


Query: 241 ttaataatttcacaagtatcgctagtgctacctctccaacttcttcaagtagcaatacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaataatttcacaagtatcgctagtgctacctctccaacttcttcaagtagcaatacta 300


Query: 301 ctccaatagttgtaccaatagcttctcattcaaatgctacaggttctttatctgcttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctccaatagttgtaccaatagcttctcattcaaatgctacaggttctttatctgcttcat 360


Query: 361 tgggtagttctttcttaaatcaacaacaaagatctttagaacaacaacaacatttaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgggtagttctttcttaaatcaacaacaaagatctttagaacaacaacaacatttaaata 420


Query: 421 cttcaaattcaaatttaactccattagctttatcttcacaggtattatatcatattaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttcaaattcaaatttaactccattagctttatcttcacaggtattatatcatattaata 480


Query: 481 attttatatctacatctacatctacatctgcatcacaatcacaatcacaatcaccatcac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attttatatctacatctacatctacatctgcatcacaatcacaatcacaatcaccatcac 540


Query: 541 cttcaccttcacactctatcaatcnnnnnnnnnnnnttcgaaaactatcattttatcaaa 600
|||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 541 cttcaccttcacactctatcaatcaaaaacaaaaaattcgaaaactatcattttatcaaa 600


Query: 601 gtaggtcaaatactctcattaatatcaataatgatgaagatagactgaatccttttccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtaggtcaaatactctcattaatatcaataatgatgaagatagactgaatccttttccaa 660


Query: 661 cttctactctatcggtttctngtcttttaaataatgatanccatggtaataatgattttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cttctactctatcggtttctngtcttttaaataatgatanccatggtaataatgattttg 720


Query: 721 atggtaaacccttccccaataatattgatattnnnnnnnnnacaactacaaatggngnta 780
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 721 atggtaaacccttccccaataatattgatattcccccccccacaactacaaatggngnta 780


Query: 781 ataataataatactactactacacaagtcaaaaaggggaaggatttatcttgttcaaaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ataataataatactactactacacaagtcaaaaaggggaaggatttatcttgttcaaaag 840


Query: 841 aattaaactgttctatgngtcatgatgacaatagcaaaggtagtagtggttccggtaata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aattaaactgttctatgngtcatgatgacaatagcaaaggtagtagtggttccggtaata 900


Query: 901 atagttgtggggataattttaataatgatgaaagtttggcacnnnnnnnttttaattcta 960
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 901 atagttgtggggataattttaataatgatgaaagtttggcacaaaaaaattttaattcta 960


Query: 961 taatatc 967
|||||||
Sbjct: 961 taatatc 967


Score = 97.6 bits (49), Expect = 2e-20
Identities = 49/49 (100%)
Strand = Plus / Plus


Query: 990 ttcattaaatctcctaaaaggactatctctacttctttccttttttctt 1038
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 ttcattaaatctcctaaaaggactatctctacttctttccttttttctt 1038


>Contig-U11191-1 (Contig-U11191-1Q) /CSM_Contig/Contig-U11191-1Q.Seq.d
Length = 1417

Score = 60.0 bits (30), Expect = 5e-09
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 512 atcacaatcacaatcacaatcaccatcacc 541
||||||||||||||||||||||||||||||
Sbjct: 1211 atcacaatcacaatcacaatcaccatcacc 1240


Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus


Query: 514 cacaatcacaatcacaatcaccatcaccttcacc 547
||||||||||||||||||||| |||||| |||||
Sbjct: 1207 cacaatcacaatcacaatcacaatcaccatcacc 1240


Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 512 atcacaatcacaatcacaatcacca 536
||||||||||||||||| |||||||
Sbjct: 1217 atcacaatcacaatcaccatcacca 1241


>Contig-U09216-1 (Contig-U09216-1Q) /CSM_Contig/Contig-U09216-1Q.Seq.d
Length = 691

Score = 52.0 bits (26), Expect = 1e-06
Identities = 32/34 (94%)
Strand = Plus / Plus


Query: 505 catctgcatcacaatcacaatcacaatcaccatc 538
|||||||||||||| ||||| |||||||||||||
Sbjct: 627 catctgcatcacaaacacaaacacaatcaccatc 660


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 43,041
Number of Sequences: 6905
Number of extensions: 43041
Number of successful extensions: 16499
Number of sequences better than 10.0: 1103
length of query: 1084
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1068
effective length of database: 5,564,391
effective search space: 5942769588
effective search space used: 5942769588
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.29
Homology vs DNA
Query= Contig-U04734-1 (Contig-U04734-1Q) /CSM_Contig/Contig-U04734-1Q.Seq.d
(1084 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C84058) Dictyostelium discoideum slug cDNA, clone SSC570. 341 0.0 4
(AU071814) Dictyostelium discoideum slug cDNA, clone SSC570. 476 e-130 1
(BJ370433) Dictyostelium discoideum cDNA clone:ddc54i06, 5' ... 50 4e-05 2
(BJ421934) Dictyostelium discoideum cDNA clone:ddv44f08, 5' ... 50 4e-05 2
(BJ421849) Dictyostelium discoideum cDNA clone:ddv44e01, 5' ... 50 4e-05 2
(BJ368989) Dictyostelium discoideum cDNA clone:ddc48h24, 5' ... 50 4e-05 2
(BJ366883) Dictyostelium discoideum cDNA clone:ddc40h16, 5' ... 50 5e-05 2
(BJ423190) Dictyostelium discoideum cDNA clone:ddv48i11, 5' ... 50 5e-05 2
(BJ426807) Dictyostelium discoideum cDNA clone:ddv60g07, 5' ... 50 5e-05 2
(EB196620) PEG001-C-004509-301 Non-Normalized Pedal-Pleural ... 48 7e-05 2
(AU037653) Dictyostelium discoideum slug cDNA, clone SSE138. 48 2e-04 2
(BX229860) Danio rerio genomic clone DKEY-56P11, genomic sur... 48 2e-04 2
(AU074569) Dictyostelium discoideum slug cDNA, clone SSL282. 36 2e-04 3
(AC177637) Strongylocentrotus purpuratus clone R3-1020F5, WO... 40 6e-04 7
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 42 6e-04 7
(DY893525) CeleSEQ12888 Cunninghamella elegans pBluescript (... 48 0.001 2
(DY893919) CeleSEQ13382 Cunninghamella elegans pBluescript (... 48 0.001 2
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 40 0.001 12
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 40 0.003 9
(AL034558) Plasmodium falciparum MAL3P2. 40 0.003 9
(AF029726) Dictyostelium discoideum histidine kinase C (dhkC... 36 0.003 4
(BJ396969) Dictyostelium discoideum cDNA clone:dds44i14, 5' ... 38 0.004 3
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 38 0.005 10
(AL954307) Zebrafish DNA sequence from clone CH211-201C19. 40 0.005 6
(AF361474) Dictyostelium discoideum receptor histidine kinas... 36 0.005 4
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 36 0.006 14
(AF222894) Ureaplasma parvum serovar 3 str. ATCC 700970, com... 36 0.006 14
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 44 0.006 6
(CU972517) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.008 2
(CR628381) Zebrafish DNA sequence from clone DKEY-27I16 in l... 44 0.008 4
(DY894132) CeleSEQ13630 Cunninghamella elegans pBluescript (... 32 0.008 4
(CU914563) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.008 2
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 40 0.008 10
(AC201462) Strongylocentrotus purpuratus clone R3-3040O16, W... 48 0.009 2
(DY893824) CeleSEQ13270 Cunninghamella elegans pBluescript (... 32 0.009 4
(AL844509) Plasmodium falciparum chromosome 13. 40 0.009 10
(DY891121) CeleSEQ7668 Cunninghamella elegans pBluescript (E... 32 0.010 4
(DY894444) CeleSEQ14019 Cunninghamella elegans pBluescript (... 32 0.010 4
(EI884716) CAH1-50N9TR CAA1Ba Cicer arietinum genomic clone ... 48 0.011 2
(AU034373) Dictyostelium discoideum slug cDNA, clone SLC768. 40 0.012 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 36 0.012 7
(BX141594) Danio rerio genomic clone DKEY-87C23, genomic sur... 48 0.012 2
(AB030033) Dictyostelium discoideum gene for AmiB, complete ... 36 0.012 5
(BX148530) Danio rerio genomic clone DKEY-105M24, genomic su... 48 0.012 2
(ED154308) AUAC-aam85h03.b1 Ascaris suum whole genome shotgu... 36 0.013 4
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.018 7
(FE243093) CAPG748.fwd CAPG Naegleria gruberi amoeba stage N... 40 0.021 3
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 40 0.022 6
(AC189678) Trichinella spiralis BAC clone TS195-47H12 from c... 34 0.028 8
(AC168707) Strongylocentrotus purpuratus clone R3-3011K17, W... 48 0.033 4
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 38 0.034 6
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 42 0.034 4
(CU694491) Zebrafish DNA sequence from clone CH1073-227D2 in... 46 0.037 2
(BJ423924) Dictyostelium discoideum cDNA clone:ddv50h23, 5' ... 36 0.038 3
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 40 0.039 8
(DB762123) Apis mellifera head cDNA, RIKEN full-length enric... 36 0.040 3
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 40 0.045 4
(BJ371072) Dictyostelium discoideum cDNA clone:ddc56e15, 5' ... 36 0.045 3
(AP010039) Lotus japonicus genomic DNA, chromosome 3, clone:... 52 0.046 1
(AP009942) Lotus japonicus genomic DNA, clone: LjB18I11, BM0... 52 0.046 1
(AP009864) Lotus japonicus genomic DNA, chromosome 1, clone:... 52 0.046 1
(AY254473) Dictyostelium discoideum nucleotide exchange fact... 44 0.048 4
(BJ361393) Dictyostelium discoideum cDNA clone:ddc17b04, 5' ... 38 0.051 3
(AC100729) Mus musculus chromosome 19, clone RP24-286E16, co... 46 0.052 3
(AU074405) Dictyostelium discoideum slug cDNA, clone SSK612. 38 0.056 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 40 0.060 6
(AC180616) Strongylocentrotus purpuratus clone R3-3092B12, W... 48 0.061 4
(BJ364680) Dictyostelium discoideum cDNA clone:ddc32f15, 5' ... 44 0.067 3
(ED096100) AUAC-aag18c10.b1 Ascaris suum whole genome shotgu... 36 0.074 4
(ED091285) AUAC-aam85h03.g1 Ascaris suum whole genome shotgu... 36 0.074 4
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 0.083 5
(EY333571) CAWY5786.rev CAWY Helobdella robusta Subtracted E... 38 0.084 3
(AC178661) Strongylocentrotus purpuratus clone R3-11P19, WOR... 48 0.086 4
(ED348647) AUAC-aad57f01.g1 Ascaris suum whole genome shotgu... 36 0.095 4
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 40 0.096 5
(AU269358) Dictyostelium discoideum vegetative cDNA clone:VS... 34 0.098 4
(EY333572) CAWY5786.fwd CAWY Helobdella robusta Subtracted E... 38 0.10 3
(AC201556) Strongylocentrotus purpuratus clone R3-3119B17, W... 40 0.11 2
(CU570897) Zebrafish DNA sequence from clone DKEY-228B20 in ... 40 0.11 5
(EI418235) PV_GBa0004N24.f PV_GBa Phaseolus vulgaris genomic... 34 0.11 3
(CR788246) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.11 6
(AC004710) Plasmodium falciparum chromosome 12, *** SEQUENCI... 36 0.12 7
(EC821592) SME00008813 esmbsro2 Sawyeria marylandensis cDNA,... 32 0.12 4
(AM484307) Vitis vinifera contig VV78X028339.14, whole genom... 46 0.12 2
(DY886500) CeleSEQ2179 Cunninghamella elegans pBluescript (E... 36 0.12 3
(AU270913) Dictyostelium discoideum vegetative cDNA clone:VS... 48 0.13 2
(AY022565) Oryza sativa microsatellite MRG4890 containing (A... 32 0.13 3
(BM622714) 17000687476606 A.Gam.ad.cDNA1 Anopheles gambiae c... 46 0.13 2
(AU270912) Dictyostelium discoideum vegetative cDNA clone:VS... 48 0.13 2
(BJ387810) Dictyostelium discoideum cDNA clone:dds5l02, 5' e... 42 0.14 2
(BX615813) Anopheles gambiae EST, clone AGADA60TR. 46 0.14 2
(DU993919) OG_ABa0114A09.r OG_ABa Oryza granulata genomic cl... 38 0.14 2
(AU052594) Dictyostelium discoideum slug cDNA, clone SLD565. 38 0.14 3
(BJ379000) Dictyostelium discoideum cDNA clone:ddc33a14, 3' ... 38 0.15 2
(EY493825) CBBP19673.fwd CBBP Hirudo medicinalis hermaphrodi... 46 0.15 2
(AC006278) Plasmodium falciparum chromosome 12 clone PFYAC34... 42 0.15 7
(BJ335627) Dictyostelium discoideum cDNA clone:dda51c03, 5' ... 34 0.15 4
(BJ385102) Dictyostelium discoideum cDNA clone:ddc51g21, 3' ... 40 0.15 2
(BJ384863) Dictyostelium discoideum cDNA clone:ddc51b04, 3' ... 40 0.16 2
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 36 0.16 9
(EH012903) USDA-FP_182176 Lysiphlebus testaceipes adult whol... 46 0.17 2
(EH013506) USDA-FP_186299 Lysiphlebus testaceipes adult whol... 42 0.17 2
(BJ384610) Dictyostelium discoideum cDNA clone:ddc50h03, 3' ... 40 0.17 2
(GD217291) G1045P365FH12.T1 Aplysia californica Pooled Norma... 38 0.17 2
(DH612455) Rattus norvegicus DNA, BAC clone: RNB1-142F18, 5'... 46 0.17 2
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 34 0.17 9
(CT712429) Danio rerio EST, clone ZF_mu_255e03 5'. 40 0.17 2
(AF238313) Dictyostelium discoideum developmental protein DG... 50 0.18 1
(AE014298) Drosophila melanogaster chromosome X, complete se... 50 0.18 1
(AC023712) Drosophila melanogaster X BAC RP98-1M22 (Roswell ... 50 0.18 1
(AC013061) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 0.18 1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 38 0.18 5
(CU929046) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.19 4
(EI447704) PV_GBa0045P20.f PV_GBa Phaseolus vulgaris genomic... 32 0.19 4
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 42 0.19 4
(AC180183) Strongylocentrotus purpuratus clone R3-4001O12, W... 48 0.19 5
(BZ971209) PUCBL92TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 40 0.19 2
(AJ224893) Dictyostelium discoideum srfA gene. 34 0.20 4
(BJ369152) Dictyostelium discoideum cDNA clone:ddc49d15, 5' ... 36 0.23 3
(AC168404) Strongylocentrotus purpuratus clone R3-4002H9, WO... 46 0.24 5
(BJ383659) Dictyostelium discoideum cDNA clone:ddc53e19, 3' ... 38 0.24 2
(EV426748) 210763907 NVP Nasonia vitripennis cDNA clone 213C... 36 0.24 3
(AC171135) Helobdella robusta clone CH306-1A6, complete sequ... 38 0.24 6
(EJ326984) 1092963395686 Global-Ocean-Sampling_GS-28-01-01-1... 36 0.26 3
(BX510325) Zebrafish DNA sequence from clone CH211-149A22 in... 42 0.28 4
(AC179777) Strongylocentrotus purpuratus clone R3-1015N09, W... 46 0.29 5
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 38 0.30 4
(BX238765) Danio rerio genomic clone DKEY-57N24, genomic sur... 34 0.30 3
(EY325659) CAWY11071.rev CAWY Helobdella robusta Subtracted ... 30 0.30 4
(AC115581) Dictyostelium discoideum chromosome 2 map complem... 38 0.30 4
(AF122424) AF122424 Strongylocentrotus purpuratus early clea... 40 0.31 2
(AC226828) Medicago truncatula chromosome 2 clone mth2-168c2... 36 0.31 8
(BJ436592) Dictyostelium discoideum cDNA clone:ddv31k13, 3' ... 38 0.32 3
(CG807163) 1118078E01.y1 1118 - RescueMu Grid S Zea mays gen... 38 0.32 2
(U32174) Dictyostelium discoideum spore lysis A (splA) gene,... 36 0.32 5
(DC233309) Plasmodium berghei strain ANKA cDNA clone:SG02726... 38 0.33 2
(EY482936) CBBP12678.rev CBBP Hirudo medicinalis hermaphrodi... 36 0.36 3
(EY294152) CAWX11518.fwd CAWX Helobdella robusta Primary Ear... 32 0.37 4
(AF111942) Dictyostelium discoideum AX4 development protein ... 36 0.37 3
(FD301168) CBFA39007.b1 CBFA: Normalized cDNA library made f... 40 0.37 2
(BJ383552) Dictyostelium discoideum cDNA clone:ddc53m12, 3' ... 38 0.38 2
(AF104350) Dictyostelium discoideum prespore-specific protei... 36 0.39 4
(AC153737) Otolemur garnettii clone CH256-300D9, WORKING DRA... 34 0.39 2
(EY293684) CAWX11263.fwd CAWX Helobdella robusta Primary Ear... 32 0.40 4
(AC124905) Equus caballus clone CH241-184O19, complete seque... 36 0.40 2
(BX004962) Zebrafish DNA sequence from clone CH211-93N23 in ... 40 0.41 6
(AC178140) Strongylocentrotus purpuratus clone R3-3078L19, W... 38 0.41 2
(EE205856) c2p10z1.f1 Danio rerio 10am (morning) eye/brain c... 42 0.41 2
(CW938701) TcB18.4_D05_T7 Tribolium BAC library Tribolium ca... 32 0.42 4
(AM441130) Vitis vinifera contig VV78X084905.10, whole genom... 36 0.43 2
(CB931937) ri73b07.y1 Meloidogyne chitwoodi J2 pDNR LIB Melo... 46 0.43 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 30 0.44 14
(AY220913) Dictyostelium discoideum ComD (comD) gene, comple... 34 0.45 4
(AC125336) Homo sapiens BAC clone RP11-698E18 from 4, comple... 34 0.45 2
(DU049717) 147335 Tomato HindIII BAC Library Solanum lycoper... 32 0.45 4
(BJ323953) Dictyostelium discoideum cDNA clone:dda4e06, 5' e... 32 0.46 4
(BJ408545) Dictyostelium discoideum cDNA clone:dds46m05, 3' ... 38 0.46 2
(BJ351611) Dictyostelium discoideum cDNA clone:dda44e04, 3' ... 38 0.46 2
(BJ382556) Dictyostelium discoideum cDNA clone:ddc45k01, 3' ... 38 0.47 2
(BJ348489) Dictyostelium discoideum cDNA clone:dda33k12, 3' ... 38 0.47 2
(BJ382803) Dictyostelium discoideum cDNA clone:ddc45n19, 3' ... 38 0.48 2
(U78758) Dictyostelium discoideum random slug cDNA-11 (rsc11... 36 0.49 3
(BJ406151) Dictyostelium discoideum cDNA clone:dds34g10, 3' ... 38 0.51 2
(BX005146) Zebrafish DNA sequence from clone CH211-152N19 in... 40 0.51 6
(EI488215) PV_GBa0103G03.r PV_GBa Phaseolus vulgaris genomic... 32 0.51 3
(BW638035) Dugesia ryukyuensis mRNA, clone: Dr_sW_010_F16, 5... 38 0.52 2
(U66912) Dictyostelium discoideum ORF DG1016 gene, partial cds. 36 0.52 3
(BJ386105) Dictyostelium discoideum cDNA clone:ddc57m02, 3' ... 38 0.52 2
(DH426686) Oryzias latipes Fosmid clone:GOLWFno844_c17, reve... 36 0.53 3
(CD483880) atr01-22ms1-d01 Atr01 Amborella trichopoda cDNA c... 38 0.53 2
(BJ399268) Dictyostelium discoideum cDNA clone:dds5l02, 3' e... 42 0.54 2
(BJ379110) Dictyostelium discoideum cDNA clone:ddc33f19, 3' ... 38 0.54 2
(AL974248) Danio rerio genomic clone DKEY-42F14, genomic sur... 40 0.54 2
(BJ357298) Dictyostelium discoideum cDNA clone:dda63h04, 3' ... 38 0.55 2
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 36 0.55 10
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 40 0.55 5
(BJ383167) Dictyostelium discoideum cDNA clone:ddc52h03, 3' ... 38 0.56 2
(AQ915547) nbeb0059A09f CUGI Rice BAC Library (EcoRI) Oryza ... 32 0.56 3
(FJ588849) Plasmodium falciparum isolate 3D7 UvrD-like prote... 36 0.56 3
(AF238311) Dictyostelium discoideum AMP deaminase (amdA) gen... 38 0.58 2
(BX649467) Zebrafish DNA sequence from clone CH211-117L16 in... 48 0.58 4
(AP000577) Homo sapiens genomic DNA, chromosome 11 clone:CMB... 38 0.59 4
(BJ379625) Dictyostelium discoideum cDNA clone:ddc35p09, 3' ... 38 0.60 2
(BJ435423) Dictyostelium discoideum cDNA clone:ddv27g06, 3' ... 42 0.61 2
(BJ379517) Dictyostelium discoideum cDNA clone:ddc35i05, 3' ... 38 0.61 2
(BJ382380) Dictyostelium discoideum cDNA clone:ddc44f13, 3' ... 38 0.61 2
(BJ407604) Dictyostelium discoideum cDNA clone:dds43h01, 3' ... 38 0.61 2
(BJ384705) Dictyostelium discoideum cDNA clone:ddc50m11, 3' ... 38 0.61 2
(BJ382509) Dictyostelium discoideum cDNA clone:ddc44p24, 3' ... 38 0.61 2
(BJ385450) Dictyostelium discoideum cDNA clone:ddc55b04, 3' ... 38 0.61 2
(BJ380931) Dictyostelium discoideum cDNA clone:ddc39d19, 3' ... 38 0.61 2
(BJ378952) Dictyostelium discoideum cDNA clone:ddc33h09, 3' ... 38 0.61 2
(BJ380825) Dictyostelium discoideum cDNA clone:ddc39o08, 3' ... 38 0.61 2
(BJ378672) Dictyostelium discoideum cDNA clone:ddc32p10, 3' ... 38 0.61 2
(BJ405206) Dictyostelium discoideum cDNA clone:dds30n19, 3' ... 38 0.61 2
(BJ382584) Dictyostelium discoideum cDNA clone:ddc45a09, 3' ... 38 0.62 2
(BJ347877) Dictyostelium discoideum cDNA clone:dda31p11, 3' ... 38 0.62 2
(EY292014) CAWX10321.rev CAWX Helobdella robusta Primary Ear... 40 0.62 2
(BJ345689) Dictyostelium discoideum cDNA clone:dda28b17, 3' ... 36 0.62 3
(BJ357418) Dictyostelium discoideum cDNA clone:dda63b18, 3' ... 38 0.62 2
(BJ352046) Dictyostelium discoideum cDNA clone:dda45p09, 3' ... 38 0.62 2
(BJ435422) Dictyostelium discoideum cDNA clone:ddv27g05, 3' ... 42 0.63 2
(BJ379390) Dictyostelium discoideum cDNA clone:ddc34p16, 3' ... 42 0.63 2
(BJ350900) Dictyostelium discoideum cDNA clone:dda41j09, 3' ... 38 0.63 2
(FD297077) CBFA36670.b1 CBFA: Normalized cDNA library made f... 40 0.63 2
(BJ445706) Dictyostelium discoideum cDNA clone:ddv60j09, 3' ... 38 0.63 2
(BJ379349) Dictyostelium discoideum cDNA clone:ddc34g15, 3' ... 38 0.63 2
(FM969809) Glossina morsitans morsitans EST, clone GMsg82g12... 44 0.63 2
(BJ379626) Dictyostelium discoideum cDNA clone:ddc35p10, 3' ... 38 0.63 2
(BJ380847) Dictyostelium discoideum cDNA clone:ddc39d14, 3' ... 38 0.64 2
(BJ386600) Dictyostelium discoideum cDNA clone:ddc58d24, 3' ... 38 0.64 2
(BJ346386) Dictyostelium discoideum cDNA clone:dda30b24, 3' ... 42 0.64 2
(BX005347) Zebrafish DNA sequence from clone DKEY-199K9 in l... 36 0.65 7
(AC200918) Strongylocentrotus purpuratus clone R3-1009A20, W... 40 0.65 4
(AE001391) Plasmodium falciparum 3D7 chromosome 2 section 28... 34 0.65 5
(FD297078) CBFA36670.g1 CBFA: Normalized cDNA library made f... 40 0.66 2
(FP017285) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.67 4
(CR381577) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 0.70 7
(DQ342053) Dictyostelium discoideum STIP mRNA, complete cds. 38 0.71 4
(CU929316) Zebrafish DNA sequence from clone CH73-182H3 in l... 48 0.71 1
(CU915762) Zebrafish DNA sequence from clone CH73-289G7 in l... 48 0.71 1
(CU896649) Zebrafish DNA sequence from clone CH73-379J16 in ... 48 0.71 1
(CU571308) Zebrafish DNA sequence from clone CH211-173D10 in... 48 0.71 1
(CU467907) Zebrafish DNA sequence from clone DKEY-167H10 in ... 48 0.71 1
(CU278516) Zebrafish DNA sequence from clone DKEY-42D18 in l... 48 0.71 1
(CT583690) Zebrafish DNA sequence from clone CH211-89L23 in ... 48 0.71 1
(CT027582) Zebrafish DNA sequence from clone CH211-214O2 in ... 48 0.71 1
(CR936477) Zebrafish DNA sequence from clone DKEY-152P12 in ... 48 0.71 1
(CR762473) Zebrafish DNA sequence from clone DKEY-189I24 in ... 48 0.71 1
(CR407590) Zebrafish DNA sequence from clone CH211-153N15 in... 48 0.71 1
(CR391943) Zebrafish DNA sequence from clone DKEY-15M21 in l... 48 0.71 1
(BX950862) Zebrafish DNA sequence from clone CH211-194L2 in ... 48 0.71 1
(BX897749) Zebrafish DNA sequence from clone DKEY-26L20 in l... 48 0.71 1
(BX571978) Zebrafish DNA sequence from clone CH211-156B2 in ... 48 0.71 1
(BX511124) Zebrafish DNA sequence from clone CH211-260P9 in ... 48 0.71 1
(BX004970) Zebrafish DNA sequence from clone DKEY-9I4. 48 0.71 1
(AL929558) Zebrafish DNA sequence from clone CH211-159N7. 48 0.71 1
(AL929334) Zebrafish DNA sequence from clone DKEY-24F15 in l... 48 0.71 1
(AL845544) Zebrafish DNA sequence from clone BUSM1-133F4 in ... 48 0.71 1
(AC146480) Danio rerio clone CH211-40O9, complete sequence. 48 0.71 1
(AC135446) Rattus norvegicus BAC CH230-231N23 (Children's H... 48 0.71 1
(AC214854) Pan troglodytes BAC clone CH251-353O9 from chromo... 48 0.71 1
(X12493) Yeast ADR6 gene for transcription factor. 48 0.71 1
(U33335) Saccharomyces cerevisiae chromosome XVI, left arm c... 48 0.71 1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 48 0.71 1
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 48 0.71 1
(AM485191) Vitis vinifera contig VV78X155224.6, whole genome... 48 0.71 1
(AM476153) Vitis vinifera contig VV78X000050.2, whole genome... 48 0.71 1
(AM470092) Vitis vinifera contig VV78X051300.6, whole genome... 48 0.71 1
(AM470074) Vitis vinifera contig VV78X108336.13, whole genom... 48 0.71 1
(AM469680) Vitis vinifera contig VV78X030437.7, whole genome... 48 0.71 1
(AM468930) Vitis vinifera contig VV78X031504.14, whole genom... 48 0.71 1
(AM462616) Vitis vinifera contig VV78X223145.3, whole genome... 48 0.71 1
(AM460500) Vitis vinifera contig VV78X073620.2, whole genome... 48 0.71 1
(AM456934) Vitis vinifera contig VV78X244497.1, whole genome... 48 0.71 1
(AM447233) Vitis vinifera contig VV78X150930.5, whole genome... 48 0.71 1
(AM445176) Vitis vinifera contig VV78X265484.9, whole genome... 48 0.71 1
(AM444751) Vitis vinifera, whole genome shotgun sequence, co... 48 0.71 1
(AM433938) Vitis vinifera contig VV78X101345.11, whole genom... 48 0.71 1
(DJ025884) Genome-wide DNA marker of Saccharomyces cerevisiae. 48 0.71 1
(AX830618) Sequence 1338 from Patent WO03072602. 48 0.71 1
(AX819588) Sequence 1338 from Patent EP1338608. 48 0.71 1
(AX595476) Sequence 1130 from Patent EP1258494. 48 0.71 1
(AR084534) Sequence 23 from patent US 5981185. 48 0.71 1
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 48 0.71 1
(AE014836) Plasmodium falciparum 3D7 chromosome 11 section 1... 48 0.71 1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 48 0.71 1
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 48 0.71 1
(AC155979) Xenopus (Silurana) tropicalis clone CH216-64G21, ... 48 0.71 1
(AC136415) Rattus norvegicus clone CH230-349G24, *** SEQUENC... 48 0.71 1
(AC128163) Rattus norvegicus clone CH230-292M21, WORKING DRA... 48 0.71 1
(AC126981) Rattus norvegicus clone CH230-189O1, *** SEQUENCI... 48 0.71 1
(AC106229) Rattus norvegicus clone CH230-98M10, *** SEQUENCI... 48 0.71 1
(FP236564) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(FP085391) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CU928117) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CU915422) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.71 1
(CU896640) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CU855946) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CU582907) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.71 1
(CU138530) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CU137720) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CT737158) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CR753794) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CR381542) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(CR354439) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.71 1
(AC201160) Strongylocentrotus purpuratus clone R3-14G20, WOR... 48 0.71 1
(AC200975) Strongylocentrotus purpuratus clone R3-115D21, WO... 48 0.71 1
(AC184563) Strongylocentrotus purpuratus clone R3-3110L10, W... 48 0.71 1
(AC181550) Strongylocentrotus purpuratus clone R3-7F22, WORK... 48 0.71 1
(AC181315) Strongylocentrotus purpuratus clone R3-4017M11, W... 48 0.71 1
(AC181203) Strongylocentrotus purpuratus clone R3-11A11, WOR... 48 0.71 1
(AC180906) Strongylocentrotus purpuratus clone R3-3064I16, W... 48 0.71 1
(AC180693) Strongylocentrotus purpuratus clone R3-3087B14, W... 48 0.71 1
(AC180679) Strongylocentrotus purpuratus clone R3-3087O15, W... 48 0.71 1
(AC179311) Strongylocentrotus purpuratus clone R3-55G3, WORK... 48 0.71 1
(AC179285) Strongylocentrotus purpuratus clone R3-45I06, WOR... 48 0.71 1
(AC178848) Strongylocentrotus purpuratus clone R3-29A23, WOR... 48 0.71 1
(AC178825) Strongylocentrotus purpuratus clone R3-25I15, WOR... 48 0.71 1
(AC178823) Strongylocentrotus purpuratus clone R3-23A16, WOR... 48 0.71 1
(AC178257) Strongylocentrotus purpuratus clone R3-1116F2, WO... 48 0.71 1
(AC178019) Strongylocentrotus purpuratus clone R3-3055D6, WO... 48 0.71 1
(AC177374) Strongylocentrotus purpuratus clone R3-1031P10, W... 48 0.71 1
(AC177027) Strongylocentrotus purpuratus clone R3-37M11, WOR... 48 0.71 1
(AC176919) Strongylocentrotus purpuratus clone R3-1104K4, WO... 48 0.71 1
(AC174255) Strongylocentrotus purpuratus clone R3-3096A7, WO... 48 0.71 1
(AC172318) Strongylocentrotus purpuratus clone R3-14F24, WOR... 48 0.71 1
(AC172309) Strongylocentrotus purpuratus clone R3-14K19, WOR... 48 0.71 1
(AC168814) Strongylocentrotus purpuratus clone R3-13G18, WOR... 48 0.71 1
(AC168787) Strongylocentrotus purpuratus clone R3-13K13, WOR... 48 0.71 1
(AC168453) Strongylocentrotus purpuratus clone R3-35M17, WOR... 48 0.71 1
(AC168450) Strongylocentrotus purpuratus clone R3-39A15, WOR... 48 0.71 1
(AC168440) Strongylocentrotus purpuratus clone R3-39F11, WOR... 48 0.71 1
(AC168382) Strongylocentrotus purpuratus clone R3-4013F18, W... 48 0.71 1
(AC006280) Plasmodium falciparum chromosome 12 clone PFYAC72... 48 0.71 1
(AZ205164) SP_0100_A2_A04_SP6E Strongylocentrotus purpuratus... 48 0.71 1
(AZ196612) SP_1032_A2_B07_SP6E Strongylocentrotus purpuratus... 48 0.71 1
(ER317884) 1092344156663 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.71 1
(EJ682332) 1092955140312 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.71 1
(EJ681972) 1092955136516 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.71 1
(EJ352300) 1092963600833 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.71 1
(EJ258785) 1095349027576 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.71 1
(EI978069) SB_BBc56-N10.F SB_BBc Sorghum bicolor genomic 5',... 48 0.71 1
(AL259289) Tetraodon nigroviridis genome survey sequence PUC... 48 0.71 1
(CU847978) A BAC library has been constructed from PN40024 g... 48 0.71 1
(CU782840) A BAC library has been constructed from PN40024 g... 48 0.71 1
(EG351053) SAAH-aad15g07.g1 Agen 0058 Schmidtea mediterranea... 48 0.71 1
(DW258547) UI-S-GG1-aav-f-14-0-UI.s1 UI-S-GG1 Euprymna scolo... 48 0.71 1
(DT764627) EST1198476 Aquilegia cDNA library Aquilegia formo... 48 0.71 1
(DB657664) Saccharomyces cerevisiae mRNA, clone: Y042_K18_F.... 48 0.71 1
(AU072418) Dictyostelium discoideum slug cDNA, clone SSE453. 48 0.71 1
(AM048491) Schistosoma mansoni lung schistosomulum EST, clon... 48 0.71 1
(AM043113) Schistosoma mansoni lung schistosomulum EST, clon... 48 0.71 1
(AJ821286) Theileria annulata EST, clone C0005205o7. 48 0.71 1
(CD192569) MS1-0074T-L338-E11-U.B MS1-0074 Schistosoma manso... 48 0.71 1
(BJ330104) Dictyostelium discoideum cDNA clone:dda27l08, 5' ... 48 0.71 1
(GD606400) 454PCS0234091 Scarlet Runner Bean globular-stage ... 48 0.71 1
(FE244063) CAPG7989.fwd CAPG Naegleria gruberi amoeba stage ... 48 0.71 1
(AL747958) Danio rerio genomic clone DKEY-10A8, genomic surv... 36 0.72 3
(DY893372) CeleSEQ12696 Cunninghamella elegans pBluescript (... 46 0.72 2
(DQ503422) Plasmodium mexicanum clone Pmx308 microsatellite ... 36 0.73 3
(AP003670) Mus musculus genomic DNA, chromosome 16q clone:RP... 42 0.74 5
(DY895402) CeleSEQ15223 Cunninghamella elegans pBluescript (... 46 0.74 2
(EL494737) D06_PFBAMHI-M-T3-PLATE19A.AB1 Blood stage Plasmod... 38 0.75 3
(CG807203) 1118078H12.y1 1118 - RescueMu Grid S Zea mays gen... 36 0.76 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 44 0.77 4
(AC178979) Strongylocentrotus purpuratus clone R3-3122D7, WO... 42 0.77 8
(AU074891) Dictyostelium discoideum slug cDNA, clone SSM372. 38 0.78 2
(EY360914) CAWZ7436.rev CAWZ Helobdella robusta Primary Late... 30 0.80 4
(DY893021) CeleSEQ12183 Cunninghamella elegans pBluescript (... 46 0.80 2
(DX451473) BE2006_F12_R IASMA L2 HindIII BAC library Vitis v... 38 0.81 3
(CU775129) A BAC library has been constructed from PN40024 g... 36 0.82 2
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 36 0.83 12
(EJ715095) 1092959143590 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.83 3
(AC117073) Dictyostelium discoideum chromosome 2 map 6045872... 32 0.83 6
(AL035475) Plasmodium falciparum MAL4P2. 36 0.86 9
(AC115606) Dictyostelium discoideum chromosome 2 map 159760-... 36 0.87 6
(BX927284) Zebrafish DNA sequence from clone CH211-28A12 in ... 40 0.88 6
(U67923) Dictyostelium discoideum (pXi) mRNA, partial cds. 40 0.88 2
(AE014845) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.88 8
(CU468817) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.90 3
(EE206467) c4b11z1.r1 Danio rerio 10am (morning) eye/brain c... 42 0.91 2
(CU469517) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 0.94 6
(EL496504) G06_PFBAMHI-S-T7-PLATE5A.AB1 Blood stage Plasmodi... 38 0.95 3
(AC178594) Strongylocentrotus purpuratus clone R3-3021N20, W... 32 0.95 7
(U87912) Dictyostelium discoideum MAP kinase kinase protein ... 32 0.96 4
(X17488) Plasmodium falciparum mRNA for asparagine-rich anti... 38 0.97 4
(AF361475) Dictyostelium discoideum double histidine kinase ... 32 0.99 4
(AC178819) Strongylocentrotus purpuratus clone R3-22O15, WOR... 34 1.00 8
(FP102937) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.0 4
(AC179332) Strongylocentrotus purpuratus clone R3-57J23, WOR... 38 1.0 6
(AC229697) Medicago truncatula clone mth2-26c18, WORKING DRA... 36 1.0 10
(EY293756) CAWX11304.rev CAWX Helobdella robusta Primary Ear... 30 1.0 4
(EY352005) CAWZ18419.rev CAWZ Helobdella robusta Primary Lat... 36 1.1 3
(EY300837) CAWX15241.rev CAWX Helobdella robusta Primary Ear... 36 1.1 3
(CU459027) Zebrafish DNA sequence from clone CH73-281K5 in l... 38 1.1 4
(DN859371) naa37h11.y2 Zebrafish whole eye. Unnormalized (na... 36 1.1 3
(FI449795) CH322-18M03.y CHORI-322 Drosophila melanogaster g... 36 1.2 2
(CU571334) Zebrafish DNA sequence from clone CH73-91P12 in l... 40 1.2 3
(AF015712) Dictyostelium discoideum kinesin-related protein ... 36 1.2 4
(DY892857) CeleSEQ11876 Cunninghamella elegans pBluescript (... 32 1.2 4
(AU261445) Dictyostelium discoideum vegetative cDNA clone:VS... 42 1.3 2
(AL590146) Zebrafish DNA sequence from clone RP71-20I5 in li... 40 1.3 3
(CT009595) Zebrafish DNA sequence from clone DKEY-97K17 in l... 40 1.3 2
(CU571086) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.3 4
(AY163574) Dictyostelium discoideum RGS-containing protein k... 36 1.3 4
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 32 1.3 12
(FE181760) LV_NC_RA28C01f Litopenaeus vannamei nerve cord cD... 30 1.3 3
(AY654900) Kluyveromyces lactis mitochondrion, complete genome. 42 1.4 4
(CR847887) Zebrafish DNA sequence from clone DKEY-178N6 in l... 38 1.4 3
(BX201031) Danio rerio genomic clone DKEY-217G13, genomic su... 36 1.4 3
(DY895094) CeleSEQ14831 Cunninghamella elegans pBluescript (... 36 1.4 3
(BX147963) Danio rerio genomic clone DKEY-106J10, genomic su... 34 1.4 3
(DW916238) MSAM159116_2754_2395 LCM-dissected maize shoot ap... 34 1.5 2
(AI508134) BSBmL3SZ09F3SK Brugia malayi infective larva cDNA... 38 1.5 2
(AC177434) Strongylocentrotus purpuratus clone R3-1031A06, W... 34 1.5 2
(DC225959) Plasmodium berghei strain ANKA cDNA clone:SG00426... 42 1.5 2
(EL509114) G03_PF-SAU3A-T3-M-P33_D.AB1 Blood stage Plasmodiu... 34 1.5 3
(EL509113) G03_PF-SAU3A-T3-M-P33.AB1 Blood stage Plasmodium ... 34 1.5 3
(BX548002) Zebrafish DNA sequence from clone CH211-170I2 in ... 36 1.5 8
(CR759945) Zebrafish DNA sequence from clone CH211-167E4 in ... 36 1.5 2
(U86962) Dictyostelium discoideum MigA (migA) gene, complete... 32 1.5 3
(X17485) Plasmodium falciparum mRNA for asparagine-rich anti... 38 1.5 4
(DY893418) CeleSEQ12750 Cunninghamella elegans pBluescript (... 38 1.5 3
(DB734827) Apis mellifera head cDNA, RIKEN full-length enric... 44 1.5 2
(CZ985858) 203414 Tomato MboI BAC Library Solanum lycopersic... 34 1.5 3
(BI975242) 01362 leafy spurge Lambda HybriZAP 2.1 two-hybrid... 36 1.5 2
(AC114258) Dictyostelium discoideum chromosome 2 map complem... 36 1.5 5
(AF362372) Dictyostelium discoideum histidine kinase DhkJ (d... 40 1.5 3
(DC228889) Plasmodium berghei strain ANKA cDNA clone:SG01380... 42 1.6 2
(AM447528) Vitis vinifera contig VV78X056992.8, whole genome... 46 1.6 2
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 1.6 7
(AF237405) Glycine max SSR-containing genomic clone 134D1, s... 34 1.6 3
(CC453969) BARC-Satt529 Size-selected soybean genomic Glycin... 34 1.6 3
(EI917515) VUH2-45N20TV VUUBBa (VUH2) Vigna unguiculata geno... 38 1.6 3
(DY889352) CeleSEQ10870 Cunninghamella elegans pBluescript (... 38 1.6 3
(DU071445) 62363 Tomato HindIII BAC Library Solanum lycopers... 34 1.6 3
(AE014837) Plasmodium falciparum 3D7 chromosome 11 section 2... 34 1.6 7
(DT760914) EST1194763 Aquilegia cDNA library Aquilegia formo... 42 1.6 2
(AB149268) Homo sapiens DNA, STS on chromosome 8, D8S0760i, ... 40 1.6 2
(DJ461309) Method for analysing genome using microsatellite ... 40 1.6 2
(CU570894) Zebrafish DNA sequence from clone CH73-92E7 in li... 38 1.6 6
(CU851236) A BAC library has been constructed from PN40024 g... 36 1.7 2
(BQ451403) PfESToaa98f12.y1 Plasmodium falciparum 3D7 asexua... 38 1.7 2
(FH050786) CHO_OF3322xg17f1.ab1 CHO_OF3 Nicotiana tabacum ge... 36 1.7 2
(AU072970) Dictyostelium discoideum slug cDNA, clone SSF592. 34 1.7 3
(AB037280) Dictyostelium discoideum DdK2 gene for Dd kinesin... 36 1.7 4
(AI721331) fd18e02.x1 Sugano Kawakami zebrafish DRA Danio re... 42 1.7 2
(FI109591) 28-L103342-1033-002-H08-CCrv IGS-SCF-1033 Bvu-KWS... 36 1.7 2
(AQ997704) RPCI-23-383P6.TJ RPCI-23 Mus musculus genomic clo... 36 1.7 3
(DY891223) CeleSEQ7906 Cunninghamella elegans pBluescript (E... 34 1.7 3
(CU855898) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 1.7 6
(AC202225) Acyrthosiphon pisum BAC VMRC38-10-A7 (Benaroya R... 36 1.7 7
(AC145329) Medicago truncatula clone mth2-8i21, complete seq... 44 1.8 5
(BI504283) BB170007A10E03.5 Bee Brain Normalized/Subtracted ... 36 1.8 2
(CG807110) 1118077H02.y1 1118 - RescueMu Grid S Zea mays gen... 36 1.8 2
(EC819451) SME00005856 esmbsro2 Sawyeria marylandensis cDNA,... 28 1.8 4
(FH590922) CHO_OF4257xn05f1.ab1 CHO_OF4 Nicotiana tabacum ge... 32 1.8 3
(AY679519) Dictyostelium discoideum sphingosine kinase B (sg... 42 1.8 2
(CT737192) Zebrafish DNA sequence from clone DKEYP-106E12 in... 40 1.8 7
(AE014833) Plasmodium falciparum 3D7 chromosome 10 section 5... 36 1.8 6
(CT583693) Zebrafish DNA sequence from clone CH73-183O18 in ... 34 1.9 6
(CC206213) CH261-170C22_Sp6.1 CH261 Gallus gallus genomic cl... 34 1.9 2
(DW405454) ES-N-S03-0421-W Penaeus monodon Eyestalk cDNA lib... 40 1.9 2
(EY971823) gmnlbric_0004m02.t7 Gadus morhua brain SSH librar... 40 1.9 2
(CX681339) ydb87b06.y2 Sea urchin EST Lib1 Strongylocentrotu... 42 1.9 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 34 1.9 5
(AC181737) Strongylocentrotus purpuratus clone R3-1037L12, W... 36 1.9 6
(AC180275) Strongylocentrotus purpuratus clone R3-3123O09, W... 40 2.0 6
(BJ370545) Dictyostelium discoideum cDNA clone:ddc54c14, 5' ... 36 2.0 3
(AP008036) Lotus japonicus genomic DNA, chromosome 4, clone:... 42 2.0 5
(AJ002383) Dictyostelium discoideum mybB gene. 32 2.0 4
(Y13119) Dictyostelium discoideum mRNA for CudA protein. 36 2.0 2
(CR381625) Zebrafish DNA sequence from clone CH211-226F10. 40 2.0 6
(CZ934194) 253046 Tomato EcoRI BAC Library Solanum lycopersi... 36 2.0 3
(CT030207) Zebrafish DNA sequence from clone CH211-176G6 in ... 38 2.0 4
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8... 40 2.0 7
(AL714030) Zebrafish DNA sequence from clone BUSM1-223C6 in ... 40 2.1 5
(BB424986) Mus musculus 12 days embryo spinal cord cDNA, RIK... 42 2.1 2
(ET315121) S0103K10_SP6 CHORI-214 Salmo salar genomic clone ... 36 2.1 2
(CT573070) Zebrafish DNA sequence from clone DKEY-175K7 in l... 34 2.1 6
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 2.1 9
(BJ441140) Dictyostelium discoideum cDNA clone:ddv45e19, 3' ... 30 2.1 3
(AM429719) Vitis vinifera contig VV78X053014.5, whole genome... 38 2.1 3
(BJ442749) Dictyostelium discoideum cDNA clone:ddv50i22, 3' ... 38 2.1 2
(BJ509984) Oryzias latipes cDNA clone:MF01FSA009P17, 3' end ... 42 2.1 2
(FK826206) FCMI-PM-1656 WSSV infected Penaeus monodon cDNA l... 32 2.1 3
(CB930649) ri57c12.y1 Meloidogyne chitwoodi J2 pDNR LIB Melo... 32 2.2 3
(Z98551) Plasmodium falciparum MAL3P6. 36 2.2 10
(BX124047) Danio rerio genomic clone DKEY-71M5, genomic surv... 36 2.2 2
(EG342425) SAAH-aab29a11.b1 Agen 0058 Schmidtea mediterranea... 42 2.2 2
(EJ182452) 1092344131715 Global-Ocean-Sampling_GS-27-01-01-1... 38 2.2 2
(AC195410) Pan troglodytes BAC clone CH251-454A11 from chrom... 36 2.2 5
(BJ403721) Dictyostelium discoideum cDNA clone:dds26g01, 3' ... 36 2.2 2
(CR854960) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 2.2 5
(DR430510) nax31d09.y1 Chicken eye (embryo). Unnormalized (n... 32 2.2 3
(GE915092) Past_28_20453_E21.ab1_c Past_norm2007 Porites ast... 40 2.3 2
(DC222580) Plasmodium berghei strain ANKA cDNA clone:MZ00608... 42 2.3 2
(AC116032) Dictyostelium discoideum chromosome 2 map 4158743... 40 2.3 4
(CR847525) Zebrafish DNA sequence from clone DKEY-223D9 in l... 40 2.3 6
(BJ408013) Dictyostelium discoideum cDNA clone:dds44l10, 3' ... 38 2.3 2
(FP016214) Zebrafish DNA sequence from clone CH73-373H5 in l... 40 2.4 5
(CR848682) Zebrafish DNA sequence from clone CH211-286K10 in... 46 2.4 3
(AY242996) Antheraea pernyi mitochondrion, complete genome. 32 2.4 5
(AM443238) Vitis vinifera contig VV78X259255.5, whole genome... 36 2.4 3
(DK210549) Oryzias latipes cDNA, clone: olova16p19, 3' end. 42 2.4 2
(DR942278) EST1133817 Aquilegia cDNA library Aquilegia formo... 42 2.4 2
(EY300400) CAWX15002.rev CAWX Helobdella robusta Primary Ear... 36 2.4 2
(CR931959) Zebrafish DNA sequence from clone DKEY-261G17 in ... 40 2.5 2
(DT730619) EST1164469 Aquilegia cDNA library Aquilegia formo... 42 2.5 2
(EY349603) CAWZ17140.fwd CAWZ Helobdella robusta Primary Lat... 40 2.5 2
(DT728186) EST1162036 Aquilegia cDNA library Aquilegia formo... 42 2.5 2
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 2.5 11
(BJ329277) Dictyostelium discoideum cDNA clone:dda24m07, 5' ... 36 2.5 3
(CT573137) Zebrafish DNA sequence from clone DKEYP-71C5 in l... 42 2.5 3
(BZ496226) BONNW19TR BO_1.6_2_KB_tot Brassica oleracea genom... 42 2.5 2
(GD205352) G1045P347FD16.T1 Aplysia californica Pooled Norma... 40 2.5 2
(CR855330) Zebrafish DNA sequence from clone CH211-268F19. 42 2.5 5
(EK115849) 1092963240428 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.5 2
(BV728249) ha3513 Helianthus annuus Ha89 genomic fragments H... 36 2.5 2

>(C84058) Dictyostelium discoideum slug cDNA, clone SSC570.
Length = 481

Score = 341 bits (172), Expect(4) = 0.0
Identities = 181/181 (100%)
Strand = Plus / Plus


Query: 762 acaactacaaatggngntaataataataatactactactacacaagtcaaaaaggggaag 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 acaactacaaatggngntaataataataatactactactacacaagtcaaaaaggggaag 217


Query: 822 gatttatcttgttcaaaagaattaaactgttctatgngtcatgatgacaatagcaaaggt 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gatttatcttgttcaaaagaattaaactgttctatgngtcatgatgacaatagcaaaggt 277


Query: 882 agtagtggttccggtaataatagttgtggggataattttaataatgatgaaagtttggca 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtagtggttccggtaataatagttgtggggataattttaataatgatgaaagtttggca 337


Query: 942 c 942
|
Sbjct: 338 c 338

Score = 281 bits (142), Expect(4) = 0.0
Identities = 148/148 (100%)
Strand = Plus / Plus


Query: 605 gtcaaatactctcattaatatcaataatgatgaagatagactgaatccttttccaacttc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaaatactctcattaatatcaataatgatgaagatagactgaatccttttccaacttc 60


Query: 665 tactctatcggtttctngtcttttaaataatgatanccatggtaataatgattttgatgg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tactctatcggtttctngtcttttaaataatgatanccatggtaataatgattttgatgg 120


Query: 725 taaacccttccccaataatattgatatt 752
||||||||||||||||||||||||||||
Sbjct: 121 taaacccttccccaataatattgatatt 148

Score = 97.6 bits (49), Expect(4) = 0.0
Identities = 49/49 (100%)
Strand = Plus / Plus


Query: 990 ttcattaaatctcctaaaaggactatctctacttctttccttttttctt 1038
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttcattaaatctcctaaaaggactatctctacttctttccttttttctt 434

Score = 36.2 bits (18), Expect(4) = 0.0
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 950 ttttaattctataatatc 967
||||||||||||||||||
Sbjct: 346 ttttaattctataatatc 363

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,240,550,844
Number of extensions: 90279910
Number of successful extensions: 12561607
Number of sequences better than 10.0: 1088
Length of query: 1084
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1060
Effective length of database: 99,340,224,878
Effective search space: 105300638370680
Effective search space used: 105300638370680
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.31
Homology vs Protein
Query= Contig-U04734-1 (Contig-U04734-1Q) /CSM_Contig/Contig-U04734-1Q.Seq.d
(1084 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q1ZXH8) RecName: Full=Guanine exchange factor for Rac 30; 288 2e-76
BC073417_1(BC073417|pid:none) Xenopus laevis MGC80883 protein, m... 41 0.064
AK154449_1(AK154449|pid:none) Mus musculus NOD-derived CD11c +ve... 40 0.11
AL845465_8(AL845465|pid:none) Mouse DNA sequence from clone RP23... 40 0.11
BC129009_1(BC129009|pid:none) Xenopus tropicalis hypothetical pr... 40 0.11
BC129209_1(BC129209|pid:none) Danio rerio ArfGAP with SH3 domain... 40 0.11
AL023828_27(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 39 0.24
AL023828_28(AL023828|pid:none) Caenorhabditis elegans YAC Y17G7B... 39 0.24
T26508(T26508)hypothetical protein Y17G7B.15 - Caenorhabditis el... 39 0.24
BC129036_1(BC129036|pid:none) Danio rerio zgc:153917, mRNA (cDNA... 39 0.32
AC115592_30(AC115592|pid:none) Dictyostelium discoideum chromoso... 39 0.42
AK222401_1(AK222401|pid:none) Ciona intestinalis mRNA for zinc f... 39 0.42
(O43150) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 37 1.2
AB007860_1(AB007860|pid:none) Homo sapiens KIAA0400 mRNA, partia... 37 1.2
AK147622_1(AK147622|pid:none) Mus musculus adult male brain UNDE... 37 1.2
BC063308_1(BC063308|pid:none) Homo sapiens ArfGAP with SH3 domai... 37 1.2
(Q7SIG6) RecName: Full=Arf-GAP with SH3 domain, ANK repeat and P... 37 1.2
AK172944_1(AK172944|pid:none) Mus musculus mRNA for mKIAA0400 pr... 37 1.2
AK147656_1(AK147656|pid:none) Mus musculus cDNA, RIKEN full-leng... 37 1.2
(Q15027) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 37 1.6
AP007150_342(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 37 1.6
BX663499_10(BX663499|pid:none) Zebrafish DNA sequence from clone... 37 1.6
BT059190_1(BT059190|pid:none) Salmo salar clone ssal-rgf-531-199... 36 2.1
(Q9UUE2) RecName: Full=Protein csx2; &AL109846_8(AL109846|pid:n... 36 2.1
(Q5FVC7) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 35 3.5
BC133093_1(BC133093|pid:none) Danio rerio cDNA clone MGC:158388 ... 35 3.5
AK147319_1(AK147319|pid:none) Mus musculus cDNA, RIKEN full-leng... 35 3.5
CU467619_1(CU467619|pid:none) Zebrafish DNA sequence from clone ... 35 3.5
AE014297_3405(AE014297|pid:none) Drosophila melanogaster chromos... 35 3.5
(Q6IVG4) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 35 4.6
(Q15057) RecName: Full=ARFGAP with coiled-coil, ANK repeat and P... 35 4.6
BC060767_1(BC060767|pid:none) Homo sapiens ArfGAP with coiled-co... 35 4.6
AM270407_3(AM270407|pid:none) Aspergillus niger contig An18c0150... 35 4.6
BC060484_1(BC060484|pid:none) Xenopus laevis hypothetical protei... 35 6.0
BT066344_1(BT066344|pid:none) Zea mays full-length cDNA clone ZM... 34 7.9
AY150563_1(AY150563|pid:none) Aspergillus nidulans SipA3 gene, c... 34 7.9
BC048818_1(BC048818|pid:none) Mus musculus ArfGAP with SH# domai... 34 7.9
AK146545_1(AK146545|pid:none) Mus musculus 17 days pregnant adul... 34 7.9
BC094581_1(BC094581|pid:none) Mus musculus ArfGAP with SH# domai... 34 7.9

>(Q1ZXH8) RecName: Full=Guanine exchange factor for Rac 30;
Length = 1619

Score = 288 bits (738), Expect = 2e-76
Identities = 167/287 (58%), Positives = 169/287 (58%)
Frame = +3

Query: 3 RYSSTESPKEPTKIKCINLILCSVKLAQVVDHPHCFQLITPSRIYFFSCEDSTVLFQWIS 182
RYSSTESPKEPTKIKCINLILCSVKLAQVVDHPHCFQLITPSRIYFFSCEDSTVLFQWIS
Sbjct: 972 RYSSTESPKEPTKIKCINLILCSVKLAQVVDHPHCFQLITPSRIYFFSCEDSTVLFQWIS 1031

Query: 183 LIRLSIKKKLESLKDENNNINNFXXXXXXXXXXXXXXXXXXXVVPIASHXXXXXXXXXXX 362
LIRLSIKKKLESLKDENNNINNF VVPIASH
Sbjct: 1032 LIRLSIKKKLESLKDENNNINNFTSIASATSPTSSSSNTTPIVVPIASHSNATGSLSASL 1091

Query: 363 XXXFLNXXXXXXXXXXHLNTSNSNLTPLALSSQVLYHINNFIXXXXXXXXXXXXXXXXXX 542
FLN HLNTSNSNLTPLALSSQVLYHINNFI
Sbjct: 1092 GSSFLNQQQRSLEQQQHLNTSNSNLTPLALSSQVLYHINNFISTSTSTSASQSQSQSPSP 1151

Query: 543 XXXXXINQKQKIRKLSFYQSRSNTLININNDEDRLNPFPTSTLSVSXLLXXXXXXXXXXX 722
INQKQKIRKLSFYQ +RLN FPTSTLSVS LL
Sbjct: 1152 SPSHSINQKQKIRKLSFYQ-------------NRLNSFPTSTLSVSCLLNNDNHGNNDFD 1198

Query: 723 XKPFXXXXXXXXXXXXXXXXXXXXXXXQVKKGKDLSCSKELNCSMXH 863
K F QVKKGKDLSCSKELNCS+ H
Sbjct: 1199 GKSFTNNIDITTTTTTNDDNNNNTTTTQVKKGKDLSCSKELNCSISH 1245

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 980,756,860
Number of extensions: 12045848
Number of successful extensions: 20716
Number of sequences better than 10.0: 39
Number of HSP's gapped: 20711
Number of HSP's successfully gapped: 39
Length of query: 361
Length of database: 1,061,185,681
Length adjustment: 130
Effective length of query: 231
Effective length of database: 636,287,441
Effective search space: 146982398871
Effective search space used: 146982398871
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.62 gvh: 0.48 alm: 0.34 top: 0.53 tms: 0.00 mit: 0.31 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
20.0 %: nuclear
16.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vacuolar
4.0 %: vesicles of secretory system

>> prediction for Contig-U04734-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0