Contig-U04686-1
Contig ID Contig-U04686-1
Contig update 2001. 8.29
Contig sequence
>Contig-U04686-1 (Contig-U04686-1Q) /CSM_Contig/Contig-U04686-1Q.Seq.d
AATAAATAAAAAACAAAAAAAAGAATGATGAATAATAAATTATTATTATT
AGTTATTGCATTATTATGTATTGCTAGTAATTCAATTGTTGAATCATTTT
CATTCAAAGTTTCAGCAAAAGTTGAAGAATGTATTTATGAAGAAATTGGT
GTAGATTTATCATTCACAGCAATGTTTCAAGTTATTCAAGGTGGTTTCAA
TGATATTGATTTCACTATCATTTCACCAGATAAAAGAATTGTATATTCTG
GTCAACGTGAAAGTGAAGGTACTAAAACACTTCGTTCAAGTTTTGCTGGT
GTTTACAGTTTTTGTTTCAGTAATAAAATGTCTTCATTAACTGATAAAAC
TGTTAGTTTTATTTTATCTGTTGGTGAATCTTCTCCAATTAGAGAAATCG
CTAAAAAGAAGGATTTAACCCCAATTGAAAGATCAATTATGACTTTATCA
GATGGTGTTATTGCAGTTAAAAATGAACAAAATTATTTCAAAATGAGAGA
AGCAGCTCACAGAAACACCGCAGAAAGTACAAATAGTAGAGTTTTATGGT
GGTCAGTTTTTGAAGCATTTGTTTTAATAGCATTAAGTATTTGGCAAATT
TATTATTCTCCGTAGATTCTTTGAAGTCAAACGTGCAGTATAAATTCAAT
ATTTCCAAATAAAATTAAAATTATAAAATAAAACAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA

Gap no gap
Contig length 766
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 1031721
End point 1030955
Strand (PLUS/MINUS) MINUS
Number of clones 4
Number of EST 4
Link to clone list U04686
List of clone(s)

est1=VSI241E,1,673
est2=SSC305E,3,698
est3=VSE383Z,44,694
est4=VSC277Z,151,767
Translated Amino Acid sequence
nk*KTKKRMMNNKLLLLVIALLCIASNSIVESFSFKVSAKVEECIYEEIGVDLSFTAMFQ
VIQGGFNDIDFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSF
ILSVGESSPIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSR
VLWWSVFEAFVLIALSIWQIYYSP*il*sqtcsinsifpnkikiik*nkkkkkkkkkkkk
kkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
nk*KTKKRMMNNKLLLLVIALLCIASNSIVESFSFKVSAKVEECIYEEIGVDLSFTAMFQ
VIQGGFNDIDFTIISPDKRIVYSGQRESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSF
ILSVGESSPIREIAKKKDLTPIERSIMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSR
VLWWSVFEAFVLIALSIWQIYYSP*il*sqtcsinsifpnkikiik*nkkkkkkkkkkkk
kkkkkkkkkkkkkkk


Frame B:
inkkqkke**iinyyy*llhyyvllviqllnhfhskfqqklknvfmkklv*iyhsqqcfk
lfkvvsmilislsfhqikelyilvnvkvkvlkhfvqvllvftvfvsvikclh*likllvl
fyllvnllqlekslkrri*pqlkdql*lyqmvllqlkmnkiisk*ekqltetpqkvqive
fyggqflkhlf**h*vfgkfiilrrffevkrav*iqyfqiklkl*nktkkkkkkkkkkkk
kkkkkkkkkkkkkkk


Frame C:
*iknkkknde**iiiisyciimyc**fnc*iifiqsfsks*rmyl*rnwcrfiihsnvss
ysrwfq*y*fhyhftr*kncifwst*k*ry*ntsfkfcwclqflfq**nvfin**nc*fy
ficw*ifsn*rnr*kegfnpn*kinydfirwcycs*k*tklfqnersssqkhrrkyk**s
fmvvsf*sicfnsikylanllfsvdslksnvqykfnisk*n*nykikqkkkkkkkkkkkk
kkkkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04686-1 (Contig-U04686-1Q)
/CSM_Contig/Contig-U04686-1Q.Seq.d
(766 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04686-1 (Contig-U04686-1Q) /CSM_Contig/Conti... 1158 0.0
Contig-U10328-1 (Contig-U10328-1Q) /CSM_Contig/Conti... 38 0.014
Contig-U14366-1 (Contig-U14366-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U09825-1 (Contig-U09825-1Q) /CSM_Contig/Conti... 36 0.054
Contig-U14894-1 (Contig-U14894-1Q) /CSM_Contig/Conti... 34 0.21
Contig-U10883-1 (Contig-U10883-1Q) /CSM_Contig/Conti... 34 0.21
Contig-U09534-1 (Contig-U09534-1Q) /CSM_Contig/Conti... 34 0.21
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti... 32 0.84
Contig-U13988-1 (Contig-U13988-1Q) /CSM_Contig/Conti... 32 0.84
Contig-U13909-1 (Contig-U13909-1Q) /CSM_Contig/Conti... 32 0.84

>Contig-U04686-1 (Contig-U04686-1Q) /CSM_Contig/Contig-U04686-1Q.Seq.d
Length = 766

Score = 1158 bits (584), Expect = 0.0
Identities = 584/584 (100%)
Strand = Plus / Plus


Query: 73 gctagtaattcaattgttgaatcattttcattcaaagtttcagcaaaagttgaagaatgt 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gctagtaattcaattgttgaatcattttcattcaaagtttcagcaaaagttgaagaatgt 132


Query: 133 atttatgaagaaattggtgtagatttatcattcacagcaatgtttcaagttattcaaggt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atttatgaagaaattggtgtagatttatcattcacagcaatgtttcaagttattcaaggt 192


Query: 193 ggtttcaatgatattgatttcactatcatttcaccagataaaagaattgtatattctggt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggtttcaatgatattgatttcactatcatttcaccagataaaagaattgtatattctggt 252


Query: 253 caacgtgaaagtgaaggtactaaaacacttcgttcaagttttgctggtgtttacagtttt 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 caacgtgaaagtgaaggtactaaaacacttcgttcaagttttgctggtgtttacagtttt 312


Query: 313 tgtttcagtaataaaatgtcttcattaactgataaaactgttagttttattttatctgtt 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgtttcagtaataaaatgtcttcattaactgataaaactgttagttttattttatctgtt 372


Query: 373 ggtgaatcttctccaattagagaaatcgctaaaaagaaggatttaaccccaattgaaaga 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggtgaatcttctccaattagagaaatcgctaaaaagaaggatttaaccccaattgaaaga 432


Query: 433 tcaattatgactttatcagatggtgttattgcagttaaaaatgaacaaaattatttcaaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcaattatgactttatcagatggtgttattgcagttaaaaatgaacaaaattatttcaaa 492


Query: 493 atgagagaagcagctcacagaaacaccgcagaaagtacaaatagtagagttttatggtgg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atgagagaagcagctcacagaaacaccgcagaaagtacaaatagtagagttttatggtgg 552


Query: 553 tcagtttttgaagcatttgttttaatagcattaagtatttggcaaatttattattctccg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcagtttttgaagcatttgttttaatagcattaagtatttggcaaatttattattctccg 612


Query: 613 tagattctttgaagtcaaacgtgcagtataaattcaatatttcc 656
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tagattctttgaagtcaaacgtgcagtataaattcaatatttcc 656


Score = 32.2 bits (16), Expect = 0.84
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 23 gaatgatgaataataa 38
||||||||||||||||
Sbjct: 23 gaatgatgaataataa 38


>Contig-U10328-1 (Contig-U10328-1Q) /CSM_Contig/Contig-U10328-1Q.Seq.d
Length = 1351

Score = 38.2 bits (19), Expect = 0.014
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 402 taaaaagaaggatttaaccccaa 424
|||||| ||||||||||||||||
Sbjct: 1269 taaaaaaaaggatttaaccccaa 1247


>Contig-U14366-1 (Contig-U14366-1Q) /CSM_Contig/Contig-U14366-1Q.Seq.d
Length = 931

Score = 36.2 bits (18), Expect = 0.054
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 87 tgttgaatcattttcatt 104
||||||||||||||||||
Sbjct: 467 tgttgaatcattttcatt 484


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,633
Number of Sequences: 6905
Number of extensions: 10633
Number of successful extensions: 919
Number of sequences better than 10.0: 88
length of query: 766
length of database: 5,674,871
effective HSP length: 16
effective length of query: 750
effective length of database: 5,564,391
effective search space: 4173293250
effective search space used: 4173293250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.28
Homology vs DNA
Query= Contig-U04686-1 (Contig-U04686-1Q) /CSM_Contig/Contig-U04686-1Q.Seq.d
(766 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU268378) Dictyostelium discoideum vegetative cDNA clone:VS... 1084 0.0 2
(AU263068) Dictyostelium discoideum vegetative cDNA clone:VS... 1045 0.0 2
(AU268379) Dictyostelium discoideum vegetative cDNA clone:VS... 1043 0.0 3
(AB112541) Dictyostelium discoideum empA gene for emp24/gp25... 660 0.0 5
(C84126) Dictyostelium discoideum slug cDNA, clone SSC305. 955 0.0 3
(AU262448) Dictyostelium discoideum vegetative cDNA clone:VS... 862 0.0 2
(AB023969) Polysphondylium pallidum lbrA gene for COP-coated... 54 8e-11 4
(AC139869) Rattus norvegicus clone CH230-321G19, WORKING DRA... 50 0.13 1
(AF009621) Onchocerca volvulus cytosolic Cu/Zn superoxide di... 44 0.45 3
(GE705585) CBUI1329.g1 B.anynana_wing.0-3d_nosize Bicyclus a... 34 1.3 3
(GE692558) CBUN4548.g1 B.anynana_wing.0-3d_2-10kb Bicyclus a... 34 1.3 3
(AL382105) Medicago truncatula EST MtBC04G12F1 : T3 end of c... 34 1.4 2
(GE692557) CBUN4548.b1 B.anynana_wing.0-3d_2-10kb Bicyclus a... 34 1.6 3
(GE705582) CBUI1329.b1 B.anynana_wing.0-3d_nosize Bicyclus a... 34 1.6 3
(FP102187) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 1.9 4
(CR406834) Gallus gallus finished cDNA, clone ChEST555m7. 46 2.0 1
(CR352945) Gallus gallus finished cDNA, clone ChEST404d4. 46 2.0 1
(AC113204) Mus musculus chromosome 12, clone RP23-312J1, com... 46 2.0 1
(AC197392) MACACA MULATTA BAC clone CH250-576P3 from chromos... 46 2.0 1
(AC196702) Rhesus Macaque BAC CH250-431P18 () complete sequ... 46 2.0 1
(EF147612) Populus trichocarpa clone WS0123_M22 unknown mRNA. 46 2.0 1
(AC184393) Strongylocentrotus purpuratus clone R3-3101I17, W... 46 2.0 1
(BH108356) RPCI-24-401K7.TV RPCI-24 Mus musculus genomic clo... 46 2.0 1
(AZ513483) 1M0359A01R Mouse 10kb plasmid UUGC1M library Mus ... 46 2.0 1
(EH291720) Q1_Reed_18d_tembryo_01_M09_141.F 14d_emb Meleagri... 46 2.0 1
(DR411410) gPGC_EST01252 Embryonic gonadal PGC cDNA Library ... 46 2.0 1
(DN491343) UM88TD12.3pR Populus female catkins cDNA library ... 46 2.0 1
(CV237954) WS0124.B21_L09 PT-GT-FL-A-3 Populus trichocarpa c... 46 2.0 1
(CV237940) WS0124.B21_K17 PT-GT-FL-A-3 Populus trichocarpa c... 46 2.0 1
(CV237703) WS0123.B21_M22 PT-GT-FL-A-3 Populus trichocarpa c... 46 2.0 1
(CV237300) WS01227.B21.1_E22 PT-GT-FL-A-3 Populus trichocarp... 46 2.0 1
(AJ392663) Gallus gallus EST clone 12g11r1. 46 2.0 1
(BU409429) 603159561F1 CSEQRBL03 Gallus gallus cDNA clone Ch... 46 2.0 1
(BU371800) 603808439F1 CSEQCHN74 Gallus gallus cDNA clone Ch... 46 2.0 1
(AC125140) Mus musculus chromosome 17 clone RP24-327D1, comp... 38 2.8 4
(AC196222) MACACA MULATTA BAC clone CH250-65M9 from chromoso... 32 3.8 2
(DD001118) Neisseria Genomic Sequences And Methods Of Their ... 40 4.1 2
(AC215699) Homo sapiens FOSMID clone ABC13-48062100E19 from ... 40 5.0 4
(EJ742533) 1092962029668 Global-Ocean-Sampling_GS-30-02-01-1... 40 6.8 2
(CR626923) Zebrafish DNA sequence from clone CH211-251P5 in ... 44 7.8 1
(BX001014) Zebrafish DNA sequence from clone DKEY-11C5 in li... 44 7.8 1
(DL005653) NUCLEIC ACID PROBES AND NUCLEIC ACID ANALOG PROBES. 44 7.8 1
(CS459578) Sequence 59 from Patent WO2006117596. 44 7.8 1
(X57105) Onchocerca volvulus gene for Cu/Zn superoxide dismu... 44 7.8 1
(AP005233) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 44 7.8 1
(AP003965) Homo sapiens genomic DNA, chromosome 11q, clone:C... 44 7.8 1
(AP000439) Homo sapiens genomic DNA, chromosome 11 clone:CMB... 44 7.8 1
(AC092178) Homo sapiens BAC clone RP11-627I23 from 2, comple... 44 7.8 1
(AC141848) Pan troglodytes clone CH251-566H2, WORKING DRAFT ... 44 7.8 1
(CU928246) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.8 1
(CU915397) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 7.8 1
(AC180713) Strongylocentrotus purpuratus clone R3-3085A17, W... 44 7.8 1
(AC013698) Homo sapiens clone RP11-22C10, WORKING DRAFT SEQU... 44 7.8 1
(ER502654) 1093015408633 Global-Ocean-Sampling_GS-35-01-01-1... 44 7.8 1
(ER472887) 1092963973762 Global-Ocean-Sampling_GS-35-01-01-1... 44 7.8 1
(AM653689) Entamoeba moshkovskii FIC GSS, clone mosh003g06.q1k. 44 7.8 1
(EJ060704) 1095456062942 Global-Ocean-Sampling_GS-26-01-01-1... 44 7.8 1
(B92744) CIT-HSP-2164B21.TR CIT-HSP Homo sapiens genomic clo... 44 7.8 1
(BZ386411) EINAP56TR EI_10_12_KB Entamoeba invadens genomic ... 44 7.8 1
(DC444389) Gryllus bimaculatus mRNA, clone:GB00364-63_E10, 5... 44 7.8 1
(DC440210) Gryllus bimaculatus mRNA, clone:GB00364-20_A07, 5... 44 7.8 1
(AM592966) Paracentrotus lividus EST, clone MPMGp1173A196Q, ... 44 7.8 1
(CJ189513) Mus musculus 0 day neonate skin cDNA, RIKEN full-... 44 7.8 1
(AI721526) fc28g07.x1 Zebrafish WashU MPIMG EST Danio rerio ... 44 7.8 1
(GE406069) 293795083 Nasonia vitripennis Female Pupae Nasoni... 44 7.8 1
(FF530778) G710P5390RD4.T0 Acorn worm normalized juvenile pE... 44 7.8 1

>(AU268378) Dictyostelium discoideum vegetative cDNA clone:VSI241,
5' end single read.
Length = 623

Score = 1084 bits (547), Expect(2) = 0.0
Identities = 550/551 (99%)
Strand = Plus / Plus


Query: 73 gctagtaattcaattgttgaatcattttcattcaaagtttcagcaaaagttgaagaatgt 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gctagtaattcaattgttgaatcattttcattcaaagtttcagcaaaagttgaagaatgt 132


Query: 133 atttatgaagaaattggtgtagatttatcattcacagcaatgtttcaagttattcaaggt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atttatgaagaaattggtgtagatttatcattcacagcaatgtttcaagttattcaaggt 192


Query: 193 ggtttcaatgatattgatttcactatcatttcaccagataaaagaattgtatattctggt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggtttcaatgatattgatttcactatcatttcaccagataaaagaattgtatattctggt 252


Query: 253 caacgtgaaagtgaaggtactaaaacacttcgttcaagttttgctggtgtttacagtttt 312
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 caacgtgaaagtgaaggtactaaaacacttcgttcaagttttgctggtgtctacagtttt 312


Query: 313 tgtttcagtaataaaatgtcttcattaactgataaaactgttagttttattttatctgtt 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tgtttcagtaataaaatgtcttcattaactgataaaactgttagttttattttatctgtt 372


Query: 373 ggtgaatcttctccaattagagaaatcgctaaaaagaaggatttaaccccaattgaaaga 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggtgaatcttctccaattagagaaatcgctaaaaagaaggatttaaccccaattgaaaga 432


Query: 433 tcaattatgactttatcagatggtgttattgcagttaaaaatgaacaaaattatttcaaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tcaattatgactttatcagatggtgttattgcagttaaaaatgaacaaaattatttcaaa 492


Query: 493 atgagagaagcagctcacagaaacaccgcagaaagtacaaatagtagagttttatggtgg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atgagagaagcagctcacagaaacaccgcagaaagtacaaatagtagagttttatggtgg 552


Query: 553 tcagtttttgaagcatttgttttaatagcattaagtatttggcaaatttattattctccg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcagtttttgaagcatttgttttaatagcattaagtatttggcaaatttattattctccg 612


Query: 613 tagattctttg 623
|||||||||||
Sbjct: 613 tagattctttg 623

Score = 32.2 bits (16), Expect(2) = 0.0
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 23 gaatgatgaataataa 38
||||||||||||||||
Sbjct: 23 gaatgatgaataataa 38

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 881,410,235
Number of extensions: 54341898
Number of successful extensions: 4353914
Number of sequences better than 10.0: 67
Length of query: 766
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 742
Effective length of database: 99,340,224,878
Effective search space: 73710446859476
Effective search space used: 73710446859476
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.30
Homology vs Protein
Query= Contig-U04686-1 (Contig-U04686-1Q) /CSM_Contig/Contig-U04686-1Q.Seq.d
(766 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q769F9) RecName: Full=Transmembrane emp24 domain-containing pro... 348 2e-95
AB023969_1(AB023969|pid:none) Polysphondylium pallidum lbrA gene... 259 9e-69
(A7SXK3) RecName: Full=Transmembrane emp24 domain-containing pro... 145 5e-34
BC050165_1(BC050165|pid:none) Danio rerio transmembrane emp24 do... 144 7e-34
(Q15363) RecName: Full=Transmembrane emp24 domain-containing pro... 143 2e-33
BC044095_1(BC044095|pid:none) Xenopus laevis coated vesicle memb... 142 2e-33
BT079590_1(BT079590|pid:none) Esox lucius clone eluc-evq-534-324... 142 3e-33
(Q63524) RecName: Full=Transmembrane emp24 domain-containing pro... 141 5e-33
BT075513_1(BT075513|pid:none) Osmerus mordax clone omor-eva-518-... 141 5e-33
(Q9R0Q3) RecName: Full=Transmembrane emp24 domain-containing pro... 141 5e-33
(P49020) RecName: Full=Transmembrane emp24 domain-containing pro... 141 5e-33
BT046693_1(BT046693|pid:none) Salmo salar clone ssal-eve-549-119... 141 7e-33
CR942760_1(CR942760|pid:none) Xenopus tropicalis finished cDNA, ... 140 9e-33
AJ720174_1(AJ720174|pid:none) Gallus gallus mRNA for hypothetica... 140 1e-32
(O17528) RecName: Full=Suppressor/enhancer of lin-12 protein 9; ... 139 8e-32
BT078311_1(BT078311|pid:none) Lepeophtheirus salmonis Pacific fo... 137 1e-31
BT077340_1(BT077340|pid:none) Lepeophtheirus salmonis Pacific fo... 136 2e-31
AK089965_1(AK089965|pid:none) Mus musculus colon RCB-0549 Cle-H3... 131 7e-30
AE014298_657(AE014298|pid:none) Drosophila melanogaster chromoso... 129 2e-29
AE017341_60(AE017341|pid:none) Cryptococcus neoformans var. neof... 122 1e-26
AF151867_1(AF151867|pid:none) Homo sapiens CGI-109 protein mRNA,... 117 3e-25
AK027512_1(AK027512|pid:none) Homo sapiens cDNA FLJ14606 fis, cl... 117 3e-25
AY552062_1(AY552062|pid:none) Aedes aegypti putative coated vesi... 115 2e-24
BC079781_1(BC079781|pid:none) Xenopus laevis MGC86295 protein, m... 114 3e-24
BC082914_1(BC082914|pid:none) Xenopus laevis MGC86295 protein, m... 114 3e-24
BC064279_1(BC064279|pid:none) Xenopus tropicalis transmembrane e... 114 3e-24
BC067383_1(BC067383|pid:none) Danio rerio transmembrane emp24 pr... 113 8e-24
BT078822_1(BT078822|pid:none) Esox lucius clone eluc-evq-527-370... 112 2e-23
BT049188_1(BT049188|pid:none) Salmo salar clone ssal-eve-570-075... 111 3e-23
FN357408_8(FN357408|pid:none) Schistosoma mansoni genome sequenc... 108 5e-23
BT073722_1(BT073722|pid:none) Oncorhynchus mykiss clone omyk-evo... 110 6e-23
BT073768_1(BT073768|pid:none) Oncorhynchus mykiss clone omyk-evo... 110 6e-23
(Q9Y3Q3) RecName: Full=Transmembrane emp24 domain-containing pro... 106 9e-22
BT081175_1(BT081175|pid:none) Caligus clemensi clone ccle-evs-50... 106 9e-22
DQ440427_1(DQ440427|pid:none) Aedes aegypti clone AET-572 membra... 102 3e-21
BC133434_1(BC133434|pid:none) Bos taurus transmembrane emp24 pro... 103 6e-21
FN314585_1(FN314585|pid:none) Schistosoma japonicum isolate Anhu... 100 1e-20
AY304581_1(AY304581|pid:none) Homo sapiens TIRAP3b long form (TI... 102 2e-20
FM992695_671(FM992695|pid:none) Candida dubliniensis CD36 chromo... 102 2e-20
AM502250_253(AM502250|pid:none) Leishmania infantum chromosome 32. 101 2e-20
BT075180_1(BT075180|pid:none) Osmerus mordax clone omor-eva-512-... 99 1e-19
AK150560_1(AK150560|pid:none) Mus musculus bone marrow macrophag... 96 2e-19
AK075218_1(AK075218|pid:none) Homo sapiens cDNA FLJ90737 fis, cl... 98 3e-19
CP000501_144(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 97 7e-19
AJ627205_1(AJ627205|pid:none) Oncorhynchus mykiss mRNA for membr... 95 2e-18
AM270206_15(AM270206|pid:none) Aspergillus niger contig An09c017... 95 3e-18
BT073999_1(BT073999|pid:none) Oncorhynchus mykiss clone omyk-evo... 95 3e-18
BT077795_1(BT077795|pid:none) Lepeophtheirus salmonis Pacific fo... 95 3e-18
DQ151584_2(DQ151584|pid:none) Pichia angusta Erp3p (ERP3) and Em... 94 3e-18
AM920436_1617(AM920436|pid:none) Penicillium chrysogenum Wiscons... 94 4e-18
BT056994_1(BT056994|pid:none) Salmo salar clone ssal-eve-535-246... 94 5e-18
AP007162_436(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 94 6e-18
BT056538_1(BT056538|pid:none) Salmo salar clone ssal-eve-542-084... 94 6e-18
CU633438_492(CU633438|pid:none) Podospora anserina genomic DNA c... 91 7e-18
AM494969_223(AM494969|pid:none) Leishmania braziliensis chromoso... 93 8e-18
AE016819_398(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 92 2e-17
AE014298_1774(AE014298|pid:none) Drosophila melanogaster chromos... 91 5e-17
AP001300_1(AP001300|pid:none) Arabidopsis thaliana genomic DNA, ... 90 9e-17
CR382137_150(CR382137|pid:none) Debaryomyces hansenii strain CBS... 90 9e-17
CR382131_1453(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 89 1e-16
(Q6AXN3) RecName: Full=Transmembrane emp24 domain-containing pro... 89 2e-16
(Q9CXE7) RecName: Full=Transmembrane emp24 domain-containing pro... 89 2e-16
BC020076_1(BC020076|pid:none) Mus musculus transmembrane emp24 p... 88 3e-16
(P32803) RecName: Full=Endosomal protein P24B; AltName: Full=Bas... 88 3e-16
(O13770) RecName: Full=Uncharacterized membrane protein C17A5.08... 88 3e-16
BC056540_1(BC056540|pid:none) Danio rerio transmembrane emp24 pr... 88 3e-16
AE017347_301(AE017347|pid:none) Cryptococcus neoformans var. neo... 88 3e-16
CR382126_541(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 87 6e-16
AL451018_3(AL451018|pid:none) Neurospora crassa DNA linkage grou... 87 6e-16
BC054154_1(BC054154|pid:none) Xenopus laevis transmembrane prote... 87 6e-16
CU928169_261(CU928169|pid:none) Kluyveromyces thermotolerans str... 87 8e-16
AB261040_1(AB261040|pid:none) Entamoeba histolytica gene for EhE... 87 8e-16
BT073560_1(BT073560|pid:none) Oncorhynchus mykiss clone omyk-evn... 87 8e-16
(Q5E971) RecName: Full=Transmembrane emp24 domain-containing pro... 86 2e-15
(Q9P7I9) RecName: Full=Endosomal protein P24B; Flags: Precursor;... 86 2e-15
(Q9Y3A6) RecName: Full=Transmembrane emp24 domain-containing pro... 85 2e-15
(Q5RE32) RecName: Full=Transmembrane emp24 domain-containing pro... 85 3e-15
AL832012_1(AL832012|pid:none) Homo sapiens mRNA; cDNA DKFZp451D0... 85 3e-15
BX248754_1(BX248754|pid:none) human full-length cDNA 5-PRIME end... 85 3e-15
AM466070_1(AM466070|pid:none) Vitis vinifera contig VV78X151322.... 85 3e-15
(P49755) RecName: Full=Transmembrane emp24 domain-containing pro... 85 3e-15
FN357365_53(FN357365|pid:none) Schistosoma mansoni genome sequen... 84 4e-15
X90517_1(X90517|pid:none) X.laevis mRNA for translocon-associate... 84 4e-15
BC080371_1(BC080371|pid:none) Xenopus tropicalis transmembrane e... 84 5e-15
(Q63584) RecName: Full=Transmembrane emp24 domain-containing pro... 84 5e-15
BC064755_1(BC064755|pid:none) Mus musculus transmembrane emp24-l... 84 5e-15
(Q9D1D4) RecName: Full=Transmembrane emp24 domain-containing pro... 84 5e-15
BC123278_1(BC123278|pid:none) Xenopus laevis transmembrane emp24... 84 6e-15
AK304210_1(AK304210|pid:none) Homo sapiens cDNA FLJ57776 complet... 83 8e-15
BC107426_1(BC107426|pid:none) Homo sapiens transmembrane emp24 p... 83 8e-15
BT048675_1(BT048675|pid:none) Salmo salar clone ssal-eve-564-043... 83 1e-14
(Q90515) RecName: Full=Transmembrane emp24 domain-containing pro... 83 1e-14
BC059496_1(BC059496|pid:none) Danio rerio transmembrane emp24-li... 83 1e-14
BT041017_1(BT041017|pid:none) Zea mays full-length cDNA clone ZM... 83 1e-14
BT056983_1(BT056983|pid:none) Salmo salar clone ssal-rgb-543-297... 82 1e-14
BC118699_1(BC118699|pid:none) Xenopus tropicalis hypothetical pr... 82 1e-14
CU928179_812(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 82 2e-14
(O35587) RecName: Full=Transmembrane protein Tmp21; AltName: Ful... 82 2e-14
BT045554_1(BT045554|pid:none) Salmo salar clone ssal-rgf-524-314... 82 2e-14
BT071857_1(BT071857|pid:none) Salmo salar clone ssal-rgf-002-249... 81 3e-14
BT037055_1(BT037055|pid:none) Zea mays full-length cDNA clone ZM... 81 4e-14
BC054575_1(BC054575|pid:none) Danio rerio transmembrane emp24 pr... 81 4e-14
AJ719300_1(AJ719300|pid:none) Gallus gallus mRNA for hypothetica... 80 5e-14
BT021063_1(BT021063|pid:none) Bos taurus transmembrane emp24 pro... 80 5e-14
AK169001_1(AK169001|pid:none) Mus musculus 17 days embryo kidney... 80 9e-14
AK044120_1(AK044120|pid:none) Mus musculus 10 days neonate corte... 80 9e-14
(Q9BVK6) RecName: Full=Transmembrane emp24 domain-containing pro... 80 9e-14
BC088422_1(BC088422|pid:none) Rattus norvegicus transmembrane em... 80 9e-14
AK313292_1(AK313292|pid:none) Homo sapiens cDNA, FLJ93804, highl... 80 9e-14
BC054179_1(BC054179|pid:none) Xenopus laevis hypothetical protei... 80 9e-14
AK152581_1(AK152581|pid:none) Mus musculus bone marrow macrophag... 79 1e-13
DQ151584_1(DQ151584|pid:none) Pichia angusta Erp3p (ERP3) and Em... 79 1e-13
AM424591_1(AM424591|pid:none) Vitis vinifera contig VV78X035889.... 79 1e-13
FN392321_700(FN392321|pid:none) Pichia pastoris GS115 chromosome... 79 1e-13
BC074441_1(BC074441|pid:none) Xenopus laevis MGC84702 protein, m... 79 2e-13
BC071427_1(BC071427|pid:none) Danio rerio zgc:86755, mRNA (cDNA ... 79 2e-13
BC087506_1(BC087506|pid:none) Xenopus laevis hypothetical protei... 79 2e-13
EU934418_1(EU934418|pid:none) TSA: Anopheles darlingi AD-295 emp... 79 2e-13
AK294122_1(AK294122|pid:none) Homo sapiens cDNA FLJ53032 complet... 79 2e-13
BT075301_1(BT075301|pid:none) Osmerus mordax clone omor-eva-510-... 78 3e-13
AE014297_1026(AE014297|pid:none) Drosophila melanogaster chromos... 78 3e-13
CR382135_246(CR382135|pid:none) Debaryomyces hansenii strain CBS... 78 4e-13
BC089720_1(BC089720|pid:none) Xenopus tropicalis MGC108344 prote... 78 4e-13
AJ720718_1(AJ720718|pid:none) Gallus gallus mRNA for hypothetica... 77 5e-13
AY543009_1(AY543009|pid:none) Bigelowiella natans COP protein mR... 77 6e-13
BC168726_1(BC168726|pid:none) Rattus norvegicus transmembrane em... 77 8e-13
AY222960_1(AY222960|pid:none) Schistosoma japonicum SJCHGC06199 ... 77 8e-13
X90872_1(X90872|pid:none) H.sapiens mRNA for gp25L2 protein. 77 8e-13
AB112544_1(AB112544|pid:none) Dictyostelium discoideum empD mRNA... 77 8e-13
(Q7Z7H5) RecName: Full=Transmembrane emp24 domain-containing pro... 77 8e-13
AK340677_1(AK340677|pid:none) Acyrthosiphon pisum ACYPI010154 mR... 77 8e-13
BT049368_1(BT049368|pid:none) Salmo salar clone ssal-rgb-537-051... 76 1e-12
BC084535_1(BC084535|pid:none) Xenopus tropicalis hypothetical LO... 75 2e-12
BT011389_1(BT011389|pid:none) Drosophila melanogaster AT29354 fu... 75 2e-12
BT044389_1(BT044389|pid:none) Drosophila melanogaster FI08064 fu... 75 2e-12
AK075642_1(AK075642|pid:none) Mus musculus 18-day embryo whole b... 72 3e-12
BC004691_1(BC004691|pid:none) Mus musculus transmembrane emp24 p... 75 3e-12
(Q13445) RecName: Full=Transmembrane emp24 domain-containing pro... 75 3e-12
(Q5R7E6) RecName: Full=Transmembrane emp24 domain-containing pro... 75 3e-12
BC129377_1(BC129377|pid:none) Danio rerio zgc:158680, mRNA (cDNA... 73 9e-12
(Q3V009) RecName: Full=Transmembrane emp24 domain-containing pro... 73 9e-12
(Q2TBK5) RecName: Full=Transmembrane emp24 domain-containing pro... 73 9e-12
U41805_1(U41805|pid:none) Mus musculus putative T1/ST2 receptor ... 73 9e-12
AE016817_426(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 73 1e-11
BC123580_1(BC123580|pid:none) Bos taurus transmembrane emp24 pro... 72 1e-11
AK304148_1(AK304148|pid:none) Homo sapiens cDNA FLJ58873 complet... 72 3e-11
CR382124_610(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 72 3e-11
AK297710_1(AK297710|pid:none) Homo sapiens cDNA FLJ58917 complet... 72 3e-11
FN315258_1(FN315258|pid:none) Schistosoma japonicum isolate Anhu... 71 3e-11
EZ000131_1(EZ000131|pid:none) TSA: Schistosoma japonicum SJCHGC0... 71 3e-11
BC038511_1(BC038511|pid:none) Homo sapiens transmembrane emp24 p... 70 6e-11
AK075529_1(AK075529|pid:none) Homo sapiens cDNA PSEC0228 fis, cl... 70 6e-11
BT044973_1(BT044973|pid:none) Salmo salar clone ssal-rgf-508-296... 70 7e-11
T22362(T22362) hypothetical protein F47G9.1 - Caenorhabditis ele... 70 7e-11
AK293308_1(AK293308|pid:none) Homo sapiens cDNA FLJ54845 complet... 70 7e-11
AB172136_1(AB172136|pid:none) Macaca fascicularis brain cDNA clo... 70 1e-10
BC082910_1(BC082910|pid:none) Xenopus laevis hypothetical LOC494... 69 1e-10
BT074939_1(BT074939|pid:none) Osmerus mordax clone omor-rgc-518-... 69 2e-10
AX969249_1(AX969249|pid:none) Sequence 52 from Patent EP1104808. 68 3e-10
EF145918_1(EF145918|pid:none) Populus trichocarpa clone WS0114_E... 67 6e-10
AM494971_176(AM494971|pid:none) Leishmania braziliensis chromoso... 67 8e-10
AX058594_1(AX058594|pid:none) Sequence 1 from Patent WO0075321. ... 66 1e-09
AL117354_3(AL117354|pid:none) Human DNA sequence from clone RP5-... 66 1e-09
AK302920_1(AK302920|pid:none) Homo sapiens cDNA FLJ52032 complet... 66 1e-09
AM502253_199(AM502253|pid:none) Leishmania infantum chromosome 35. 66 1e-09
AM294798_1(AM294798|pid:none) Drosophila melanogaster CG11785 ge... 66 1e-09
(A8MT96) RecName: Full=Glycoprotein 25L; Short=GP25L; F... 65 2e-09
AK159813_1(AK159813|pid:none) Mus musculus osteoclast-like cell ... 65 2e-09
AM294801_1(AM294801|pid:none) Drosophila melanogaster CG11785 ge... 65 3e-09
AB261038_1(AB261038|pid:none) Entamoeba histolytica gene for EhE... 64 4e-09
AB097009_1(AB097009|pid:none) Homo sapiens mRNA for putative NFk... 64 4e-09
Y17127_1(Y17127|pid:none) Cyprinus carpio mRNA for S31 protein. 64 4e-09
FM253350_1(FM253350|pid:none) Blattella germanica partial mRNA f... 64 7e-09
BT053421_1(BT053421|pid:none) Medicago truncatula clone MTYFP_FQ... 64 7e-09
DQ440320_1(DQ440320|pid:none) Aedes aegypti clone AET-409 transm... 63 1e-08
AE014298_2184(AE014298|pid:none) Drosophila melanogaster chromos... 62 2e-08
(Q6C503) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 62 2e-08
BT041117_1(BT041117|pid:none) Zea mays full-length cDNA clone ZM... 62 3e-08
(Q6BTC2) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 61 3e-08
DQ443143_1(DQ443143|pid:none) Bombyx mori transmembrane traffick... 61 3e-08
AK341432_1(AK341432|pid:none) Acyrthosiphon pisum ACYPI008048 mR... 61 3e-08
(Q9D2R4) RecName: Full=Glycoprotein 25L; Short=GP25L; F... 61 3e-08
AC009176_13(AC009176|pid:none) Arabidopsis thaliana chromosome I... 60 8e-08
(P53198) RecName: Full=Protein ERP6; Flags: Precursor; &S64004(... 60 8e-08
AE016819_229(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 59 1e-07
BC100009_1(BC100009|pid:none) Danio rerio transmembrane emp24 pr... 59 2e-07
BT081028_1(BT081028|pid:none) Caligus clemensi clone ccle-evs-51... 59 2e-07
EU955673_1(EU955673|pid:none) Zea mays clone 1542082 transmembra... 59 2e-07
CU928179_433(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 59 2e-07
(P38819) RecName: Full=Protein ERP5; Flags: Precursor; &S48952(... 58 3e-07
AE017344_505(AE017344|pid:none) Cryptococcus neoformans var. neo... 58 3e-07
AM502249_146(AM502249|pid:none) Leishmania infantum chromosome 31. 58 3e-07
AP004125_8(AP004125|pid:none) Oryza sativa Japonica Group genomi... 57 5e-07
AL451017_23(AL451017|pid:none) Neurospora crassa DNA linkage gro... 57 5e-07
(Q9HEK4) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 57 5e-07
CR382121_367(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 57 6e-07
FN357583_13(FN357583|pid:none) Schistosoma mansoni genome sequen... 57 8e-07
BT077508_1(BT077508|pid:none) Lepeophtheirus salmonis Pacific fo... 56 1e-06
EU971148_1(EU971148|pid:none) Zea mays clone 358430 transmembran... 56 1e-06
AM432265_5(AM432265|pid:none) Vitis vinifera contig VV78X079613.... 56 1e-06
CP000585_128(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 56 1e-06
AP005393_18(AP005393|pid:none) Oryza sativa Japonica Group genom... 56 1e-06
CU928169_341(CU928169|pid:none) Kluyveromyces thermotolerans str... 56 1e-06
AY693075_1(AY693075|pid:none) Saccharomyces cerevisiae clone FLH... 56 1e-06
AC159429_19(AC159429|pid:none) Trypanosoma brucei chromosome 7 c... 55 2e-06
(Q5B5L5) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 55 2e-06
AL035477_15(AL035477|pid:none) Plasmodium falciparum MAL4P4. &A... 55 2e-06
AM920437_1876(AM920437|pid:none) Penicillium chrysogenum Wiscons... 55 3e-06
BT080990_1(BT080990|pid:none) Caligus clemensi clone ccle-evs-50... 55 3e-06
AC091781_74(AC091781|pid:none) Trypanosoma brucei chromosome 4 c... 55 3e-06
CU640366_128(CU640366|pid:none) Podospora anserina genomic DNA c... 54 4e-06
AL844509_145(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 54 4e-06
AM269977_22(AM269977|pid:none) Aspergillus niger contig An01c030... 54 5e-06
AM910987_258(AM910987|pid:none) Plasmodium knowlesi strain H chr... 54 7e-06
AY557710_1(AY557710|pid:none) Saccharomyces cerevisiae clone FLH... 52 2e-05
AM920437_316(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 52 2e-05
CR380954_199(CR380954|pid:none) Candida glabrata strain CBS138 c... 52 2e-05
(O13946) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 52 2e-05
AM502249_147(AM502249|pid:none) Leishmania infantum chromosome 31. 52 2e-05
BT076683_1(BT076683|pid:none) Caligus rogercresseyi clone crog-e... 52 2e-05
AM910996_133(AM910996|pid:none) Plasmodium knowlesi strain H chr... 52 2e-05
BX295540_3(BX295540|pid:none) Neurospora crassa DNA linkage grou... 52 3e-05
AY849658_1(AY849658|pid:none) Magnaporthe grisea ERP1 protein-li... 52 3e-05
AC155889_16(AC155889|pid:none) Medicago truncatula chromosome 2 ... 51 4e-05
AK296800_1(AK296800|pid:none) Homo sapiens cDNA FLJ53754 complet... 51 5e-05
(Q5A302) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 51 5e-05
EU963278_1(EU963278|pid:none) Zea mays clone 260295 transmembran... 50 6e-05
CU928171_159(CU928171|pid:none) Kluyveromyces thermotolerans str... 50 6e-05
CR382139_628(CR382139|pid:none) Debaryomyces hansenii strain CBS... 50 6e-05
FM992690_586(FM992690|pid:none) Candida dubliniensis CD36 chromo... 50 8e-05
AM883112_1(AM883112|pid:none) Anas platyrhynchos partial mRNA fo... 50 8e-05
BC038498_1(BC038498|pid:none) Mus musculus transmembrane emp24 d... 50 8e-05
EF144715_1(EF144715|pid:none) Populus trichocarpa clone WS01117_... 50 8e-05
AY061384_1(AY061384|pid:none) Drosophila melanogaster LD30746 fu... 49 1e-04
CP000583_483(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 49 1e-04
AK073679_1(AK073679|pid:none) Oryza sativa Japonica Group cDNA c... 49 1e-04
AK014065_1(AK014065|pid:none) Mus musculus 13 days embryo head c... 49 1e-04
FM992688_1009(FM992688|pid:none) Candida dubliniensis CD36 chrom... 49 2e-04
EF082959_1(EF082959|pid:none) Picea sitchensis clone WS02722_I15... 49 2e-04
FN319598_1(FN319598|pid:none) Schistosoma japonicum isolate Anhu... 49 2e-04
FN319600_1(FN319600|pid:none) Schistosoma japonicum isolate Anhu... 49 2e-04
FN392321_1171(FN392321|pid:none) Pichia pastoris GS115 chromosom... 49 2e-04
CU928176_549(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 48 4e-04
AL109673_1(AL109673|pid:none) Homo sapiens mRNA full length inse... 48 4e-04
AE014296_1127(AE014296|pid:none) Drosophila melanogaster chromos... 48 4e-04
AJ606027_1(AJ606027|pid:none) Triticum aestivum partial mRNA for... 47 7e-04
AC161863_26(AC161863|pid:none) Medicago truncatula clone mth2-17... 47 7e-04
EF145950_1(EF145950|pid:none) Populus trichocarpa clone WS0114_H... 46 0.001
CT005268_113(CT005268|pid:none) Leishmania major strain Friedlin... 46 0.001
AC161863_28(AC161863|pid:none) Medicago truncatula clone mth2-17... 46 0.001
CR382125_930(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 45 0.002
CR548612_328(CR548612|pid:none) Paramecium tetraurelia macronucl... 45 0.002
CP001574_100(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 45 0.003
EF145610_1(EF145610|pid:none) Populus trichocarpa clone WS01126_... 44 0.004
(O14324) RecName: Full=Uncharacterized membrane protein C16E9.09... 44 0.004
BT015148_1(BT015148|pid:none) Arabidopsis thaliana At2g03290 gen... 44 0.004
CR380953_21(CR380953|pid:none) Candida glabrata strain CBS138 ch... 44 0.006
G01160(G01160) transmembrane protein - human (fragment) &X97444... 44 0.006
AC073178_16(AC073178|pid:none) Arabidopsis thaliana chromosome 1... 42 0.017
BC016568_1(BC016568|pid:none) Mus musculus transmembrane emp24 d... 42 0.022
(Q5KMQ3) RecName: Full=Endoplasmic reticulum vesicle protein 25;... 42 0.022
Y17129_1(Y17129|pid:none) Anguilla anguilla mRNA for S31 protein. 42 0.022
CR380955_47(CR380955|pid:none) Candida glabrata strain CBS138 ch... 42 0.022
(Q8WW62) RecName: Full=Transmembrane emp24 domain-containing pro... 42 0.028
CR940347_25(CR940347|pid:none) Theileria annulata strain Ankara ... 42 0.028
BC020827_1(BC020827|pid:none) Homo sapiens transmembrane emp24 p... 42 0.028
AC006535_7(AC006535|pid:none) Genomic sequence for Arabidopsis t... 42 0.028
EF148792_1(EF148792|pid:none) Populus trichocarpa x Populus delt... 41 0.037
CU928178_409(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 40 0.063
CR382132_971(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 40 0.11
AB261037_1(AB261037|pid:none) Entamoeba histolytica gene for EhE... 40 0.11
BC087777_1(BC087777|pid:none) Xenopus tropicalis transmembrane e... 39 0.14
(Q0VCA9) RecName: Full=Transmembrane emp24 domain-containing pro... 39 0.18
CP000496_469(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.24
AK118529_1(AK118529|pid:none) Arabidopsis thaliana At1g26690 mRN... 39 0.24
CU928169_682(CU928169|pid:none) Kluyveromyces thermotolerans str... 38 0.31
(Q9CQG0) RecName: Full=Transmembrane emp24 domain-containing pro... 38 0.41
AC068197_23(AC068197|pid:none) Genomic sequence for Arabidopsis ... 38 0.41
AY191223_1(AY191223|pid:none) Homo sapiens transformation-relate... 37 0.91
AL607152_8(AL607152|pid:none) Mouse DNA sequence from clone RP23... 37 0.91
AK074557_1(AK074557|pid:none) Homo sapiens cDNA FLJ90076 fis, cl... 37 0.91
CP000703_345(CP000703|pid:none) Staphylococcus aureus subsp. aur... 35 2.0
AE015928_2628(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 35 2.6
AY954964_16(AY954964|pid:none) Bacteriophage 29, complete genome. 35 2.6
AB370268_52(AB370268|pid:none) Staphylococcus phage phiMR11 DNA,... 35 2.6
AY954965_16(AY954965|pid:none) Bacteriophage 52A, complete genom... 35 2.6
CP000931_4221(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 33 7.7

>(Q769F9) RecName: Full=Transmembrane emp24 domain-containing
protein A; Flags: Precursor;
&AB112541_1(AB112541|pid:none)
Length = 205

Score = 348 bits (892), Expect(2) = 2e-95
Identities = 177/177 (100%), Positives = 177/177 (100%)
Frame = +1

Query: 76 SNSIVESFSFKVSAKVEECIYEEIGVDLSFTAMFQVIQGGFNDIDFTIISPDKRIVYSGQ 255
SNSIVESFSFKVSAKVEECIYEEIGVDLSFTAMFQVIQGGFNDIDFTIISPDKRIVYSGQ
Sbjct: 18 SNSIVESFSFKVSAKVEECIYEEIGVDLSFTAMFQVIQGGFNDIDFTIISPDKRIVYSGQ 77

Query: 256 RESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERS 435
RESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERS
Sbjct: 78 RESEGTKTLRSSFAGVYSFCFSNKMSSLTDKTVSFILSVGESSPIREIAKKKDLTPIERS 137

Query: 436 IMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYY 606
IMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYY
Sbjct: 138 IMTLSDGVIAVKNEQNYFKMREAAHRNTAESTNSRVLWWSVFEAFVLIALSIWQIYY 194

Score = 25.0 bits (53), Expect(2) = 2e-95
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2

Query: 608 LRRFFEVKRAV 640
LRRFFEVKRAV
Sbjct: 195 LRRFFEVKRAV 205

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 817,581,548
Number of extensions: 13636964
Number of successful extensions: 30506
Number of sequences better than 10.0: 287
Number of HSP's gapped: 30352
Number of HSP's successfully gapped: 312
Length of query: 255
Length of database: 1,061,185,681
Length adjustment: 126
Effective length of query: 129
Effective length of database: 649,361,233
Effective search space: 83767599057
Effective search space used: 83767599057
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.97 gvh: 0.78 alm: 0.28 top: 0.07 tms: 0.07 mit: 0.41 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 1.43 leu: 0.00 gpi: 1.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 1.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

36.0 %: plasma membrane
32.0 %: extracellular, including cell wall
20.0 %: endoplasmic reticulum
12.0 %: Golgi

>> prediction for Contig-U04686-1 is pla

VS (DIR, S) 3
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0