Contig-U04631-1
Contig ID Contig-U04631-1
Contig update 2001. 8.29
Contig sequence
>Contig-U04631-1 (Contig-U04631-1Q) /CSM_Contig/Contig-U04631-1Q.Seq.d
TTAATATCTCTCTCTCTCTCTCCTCTAAGTTTTTCAAATAATAATAATAA
TATAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAATCACA
AGCTCACTCACTCACAAACACACTAACCCAATAACCTGACCAAACACAAT
AATTTTCAATGGTCTCACTTTAAAAAAATAAAATATAAAAAAATAAAAAA
ATCTCAAACTACCAATAAACTAACTATTTCAAAATAAATAAATAAATTCG
CCCATTCCAAAGGATCCTTTGGAAAAAATATAAAAATTATATATATATAT
AAAAAATAAAATAAATTAAAAAAAAAAAAAAATAATAATAATTATATAAA
AAAAATATAAATTTAACAACTATTATAAAATAACAATAAGAAAGTCAAAT
ATTAATTTATTAAAATCTATTTTTGTAGTAACAAATTTTATATCGCGAAA
TATTTTAAAAATAAAAAA

Gap no gap
Contig length 468
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 2489636
End point 2489168
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 3
Link to clone list U04631
List of clone(s)

est1=SSB859F,1,318
est2=SSH415E,12,469
est3=SSG363F,16,342
Translated Amino Acid sequence
LISLSLSPLSFSNNNNNIIKKKKKKKKKKKTNHKLTHSQTH*pnnltkhnnfqwshfkki
kykkikksqttnkltisk*inkfahskgsfgknikiiyiykk*nklkkkknnnnyikki*
i*qll*nnnkkvky*fikiyfcsnkfyiakyfknkk


Translated Amino Acid sequence (All Frames)
Frame A:
LISLSLSPLSFSNNNNNIIKKKKKKKKKKKTNHKLTHSQTH*pnnltkhnnfqwshfkki
kykkikksqttnkltisk*inkfahskgsfgknikiiyiykk*nklkkkknnnnyikki*
i*qll*nnnkkvky*fikiyfcsnkfyiakyfknkk


Frame B:
*ylslsll*vfqiiiii**kkkkkkkkkkkqitsslthkhtnpit*pntiifngltlkk*
nikk*knlklpin*lfqnk*inspipkdpleki*klyiyiknkin*kkkkiiiii*kkyk
fnnyykitirksninllksifvvtnfisrnilkik


Frame C:
nislslsskffk****ynkkkkkkkkkkknksqahsltntltq*pdqtq*fsmvsl*knk
i*knkkisnyq*tnyfkink*irpfqrilwkkyknyiyi*kik*ikkkkk***lykknin
lttiik*q*esqiliy*nlfl**qilyreif*k*k


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04631-1 (Contig-U04631-1Q)
/CSM_Contig/Contig-U04631-1Q.Seq.d
(468 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04631-1 (Contig-U04631-1Q) /CSM_Contig/Conti... 159 3e-39
Contig-U09153-1 (Contig-U09153-1Q) /CSM_Contig/Conti... 46 3e-05
Contig-U13905-1 (Contig-U13905-1Q) /CSM_Contig/Conti... 44 1e-04
Contig-U12089-1 (Contig-U12089-1Q) /CSM_Contig/Conti... 44 1e-04
Contig-U11330-1 (Contig-U11330-1Q) /CSM_Contig/Conti... 44 1e-04
Contig-U10772-1 (Contig-U10772-1Q) /CSM_Contig/Conti... 44 1e-04
Contig-U06611-1 (Contig-U06611-1Q) /CSM_Contig/Conti... 44 1e-04
Contig-U12806-1 (Contig-U12806-1Q) /CSM_Contig/Conti... 42 5e-04
Contig-U12523-1 (Contig-U12523-1Q) /CSM_Contig/Conti... 42 5e-04
Contig-U12368-1 (Contig-U12368-1Q) /CSM_Contig/Conti... 42 5e-04

>Contig-U04631-1 (Contig-U04631-1Q) /CSM_Contig/Contig-U04631-1Q.Seq.d
Length = 468

Score = 159 bits (80), Expect = 3e-39
Identities = 80/80 (100%)
Strand = Plus / Plus


Query: 92 caaatcacaagctcactcactcacaaacacactaacccaataacctgaccaaacacaata 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 caaatcacaagctcactcactcacaaacacactaacccaataacctgaccaaacacaata 151


Query: 152 attttcaatggtctcacttt 171
||||||||||||||||||||
Sbjct: 152 attttcaatggtctcacttt 171


Score = 141 bits (71), Expect = 8e-34
Identities = 71/71 (100%)
Strand = Plus / Plus


Query: 202 tctcaaactaccaataaactaactatttcaaaataaataaataaattcgcccattccaaa 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tctcaaactaccaataaactaactatttcaaaataaataaataaattcgcccattccaaa 261


Query: 262 ggatcctttgg 272
|||||||||||
Sbjct: 262 ggatcctttgg 272


Score = 135 bits (68), Expect = 5e-32
Identities = 68/68 (100%)
Strand = Plus / Plus


Query: 389 agaaagtcaaatattaatttattaaaatctatttttgtagtaacaaattttatatcgcga 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 agaaagtcaaatattaatttattaaaatctatttttgtagtaacaaattttatatcgcga 448


Query: 449 aatatttt 456
||||||||
Sbjct: 449 aatatttt 456


Score = 67.9 bits (34), Expect = 9e-12
Identities = 34/34 (100%)
Strand = Plus / Plus


Query: 23 ctctaagtttttcaaataataataataatataat 56
||||||||||||||||||||||||||||||||||
Sbjct: 23 ctctaagtttttcaaataataataataatataat 56


Score = 36.2 bits (18), Expect = 0.032
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 255 ttccaaaggatcctttgg 272
||||||||||||||||||
Sbjct: 274 ttccaaaggatcctttgg 257


Score = 32.2 bits (16), Expect = 0.51
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 36 aaataataataataatataa 55
||||||||||||| ||||||
Sbjct: 330 aaataataataattatataa 349


>Contig-U09153-1 (Contig-U09153-1Q) /CSM_Contig/Contig-U09153-1Q.Seq.d
Length = 924

Score = 46.1 bits (23), Expect = 3e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 30 tttttcaaataataataataata 52
|||||||||||||||||||||||
Sbjct: 422 tttttcaaataataataataata 444


Score = 32.2 bits (16), Expect = 0.51
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 37 aataataataataata 52
||||||||||||||||
Sbjct: 183 aataataataataata 198


Score = 32.2 bits (16), Expect = 0.51
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 37 aataataataataata 52
||||||||||||||||
Sbjct: 435 aataataataataata 450


Score = 32.2 bits (16), Expect = 0.51
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 37 aataataataataata 52
||||||||||||||||
Sbjct: 432 aataataataataata 447


Score = 30.2 bits (15), Expect = 2.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 37 aataataataataat 51
|||||||||||||||
Sbjct: 438 aataataataataat 452


Score = 28.2 bits (14), Expect = 7.9
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 37 aataataataataa 50
||||||||||||||
Sbjct: 186 aataataataataa 199


Score = 28.2 bits (14), Expect = 7.9
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 39 taataataataata 52
||||||||||||||
Sbjct: 770 taataataataata 783


Score = 28.2 bits (14), Expect = 7.9
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 39 taataataataata 52
||||||||||||||
Sbjct: 182 taataataataata 195


>Contig-U13905-1 (Contig-U13905-1Q) /CSM_Contig/Contig-U13905-1Q.Seq.d
Length = 3002

Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 31 ttttcaaataataataataata 52
||||||||||||||||||||||
Sbjct: 2473 ttttcaaataataataataata 2494


Score = 30.2 bits (15), Expect = 2.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 37 aataataataataat 51
|||||||||||||||
Sbjct: 2482 aataataataataat 2496


Score = 28.2 bits (14), Expect = 7.9
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 399 atattaatttatta 412
||||||||||||||
Sbjct: 66 atattaatttatta 79


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,974
Number of Sequences: 6905
Number of extensions: 27974
Number of successful extensions: 14489
Number of sequences better than 10.0: 2459
length of query: 468
length of database: 5,674,871
effective HSP length: 16
effective length of query: 452
effective length of database: 5,564,391
effective search space: 2515104732
effective search space used: 2515104732
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 6.27
Homology vs DNA
Query= Contig-U04631-1 (Contig-U04631-1Q) /CSM_Contig/Contig-U04631-1Q.Seq.d
(468 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU038206) Dictyostelium discoideum slug cDNA, clone SSH415. 159 1e-62 3
(AU073204) Dictyostelium discoideum slug cDNA, clone SSG363. 159 1e-46 2
(AU071596) Dictyostelium discoideum slug cDNA, clone SSB859. 159 1e-46 2
(AC207704) Mimulus guttatus clone MG_Bb-094P09, complete seq... 52 0.019 1
(BH485089) BOGRX54TR BOGR Brassica oleracea genomic clone BO... 52 0.019 1
(ED805815) MG__Bb0094D22r MG__Bb Mimulus guttatus genomic, g... 52 0.019 1
(ED800775) MG__Ba0089N08r MG__Ba Mimulus guttatus genomic, g... 52 0.019 1
(BH688320) BOHYA50TF BO_2_3_KB Brassica oleracea genomic clo... 52 0.019 1
(CV520445) 0089P0045Z_A11_T7 Mimulus guttatus library 2 Mimu... 52 0.019 1
(AC176403) Strongylocentrotus purpuratus clone R3-3044J13, W... 42 0.021 2
(BX571686) Carp DNA sequence from clone XXfos-C114. 44 0.072 2
(AC103309) Rattus norvegicus clone CH230-131P21, *** SEQUENC... 50 0.076 1
(AP009095) Marchantia polymorpha genomic DNA, chromosome Y, ... 50 0.076 1
(ET196938) MUGQ_CH252P395O01Sp6_CP750_001 CHORI-252 Vervet M... 50 0.076 1
(ER924064) MUGQ_CH252P283M09Sp6_CP414_035 CHORI-252 Vervet M... 50 0.076 1
(ED559976) MUGQ_CH252P137B24T7_CN136_096 CHORI-252 Vervet Mo... 50 0.076 1
(BX088705) Zebrafish DNA sequence from clone DKEY-21G19. 42 0.11 2
(AC099067) Rattus norvegicus clone CH230-6I23, WORKING DRAFT... 46 0.13 2
(AC099350) Rattus norvegicus clone CH230-6O13, WORKING DRAFT... 46 0.13 2
(CU137725) Zebrafish DNA sequence from clone DKEY-246D1 in l... 42 0.18 3
(CR631123) Zebrafish DNA sequence from clone DKEY-189H14 in ... 42 0.28 2
(AC216456) Populus trichocarpa clone POP034-G24, complete se... 48 0.30 1
(AB258672) Pipistrellus abramus LOC133619 gene, INT0657 locu... 48 0.30 1
(Z93397) Caenorhabditis elegans Cosmid ZC482. 48 0.30 1
(AF362375) Dictyostelium discoideum histidine kinase DhkE (d... 48 0.30 1
(AC189672) Trichinella spiralis BAC clone TS195-18H12 from c... 48 0.30 1
(AC130922) Rattus norvegicus clone CH230-202J11, *** SEQUENC... 48 0.30 1
(AC103499) Rattus norvegicus clone CH230-32D20, *** SEQUENCI... 48 0.30 1
(Z98857) Caenorhabditis elegans DNA *** SEQUENCING IN PROGRE... 48 0.30 1
(AC177687) Strongylocentrotus purpuratus clone R3-1013I2, WO... 48 0.30 1
(DE566045) Bombyx mori genomic DNA, Fosmid clone:GBMFno209_e... 48 0.30 1
(BI511579) BB160006A20C09.5 Bee Brain Normalized Library, BB... 48 0.30 1
(CR847880) Zebrafish DNA sequence from clone DKEY-165L13 in ... 44 0.32 2
(CE510148) tigr-gss-dog-17000310725845 Dog Library Canis lup... 40 0.34 2
(BX548158) Zebrafish DNA sequence from clone CH211-106G4 in ... 44 0.37 2
(CV836435) ID0ACC30BC05RM1 ID0ACC Acyrthosiphon pisum cDNA c... 40 0.42 2
(AL935310) Zebrafish DNA sequence from clone CH211-235I6 in ... 42 0.78 2
(CT573175) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.81 2
(CU972390) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.86 2
(BX510933) Zebrafish DNA sequence from clone CH211-271G16 in... 42 1.1 2
(BX901894) Zebrafish DNA sequence from clone DKEY-71L4 in li... 38 1.2 2
(CT025647) Zebrafish DNA sequence from clone CH211-173P13 in... 46 1.2 1
(CR925824) Zebrafish DNA sequence from clone DKEYP-66E4 in l... 46 1.2 1
(CR391989) Zebrafish DNA sequence from clone DKEY-263H23 in ... 46 1.2 1
(BX901929) Zebrafish DNA sequence from clone DKEY-11K24 in l... 46 1.2 1
(BX000451) Zebrafish DNA sequence from clone CH211-30E10. 46 1.2 1
(AL954667) Zebrafish DNA sequence from clone CH211-214K3 in ... 46 1.2 1
(GF035777) pRRL2:Newb:20080411:415933 USMARC Pig Breed SNP D... 46 1.2 1
(AL646048) Mouse DNA sequence from clone RP23-289C5 on chrom... 46 1.2 1
(AC137978) Mus musculus chromosome 1, clone RP24-468M12, com... 46 1.2 1
(AC129933) Mus musculus chromosome 1, clone RP23-234P14, com... 46 1.2 1
(AC124357) Mus musculus BAC clone RP24-490K11 from chromosom... 46 1.2 1
(AC102062) Mus musculus chromosome 19, clone RP23-217B9, com... 46 1.2 1
(AC212272) Macaca mulatta BAC CH250-329N3 (Children's Hospi... 46 1.2 1
(AC199586) Rhesus Macaque BAC CH250-101H7 () complete seque... 46 1.2 1
(EU534409) Triticum aestivum cultivar Chinese Yumai mitochon... 46 1.2 1
(CU468223) S.lycopersicum DNA sequence from clone LE_HBa-111... 46 1.2 1
(AP008982) Triticum aestivum mitochondrial DNA, complete gen... 46 1.2 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 46 1.2 1
(AP004324) Oryza sativa Japonica Group genomic DNA, chromoso... 46 1.2 1
(AM474701) Vitis vinifera, whole genome shotgun sequence, co... 46 1.2 1
(AM470757) Vitis vinifera contig VV78X034688.2, whole genome... 46 1.2 1
(AM461949) Vitis vinifera contig VV78X127711.9, whole genome... 46 1.2 1
(AM445845) Vitis vinifera contig VV78X261114.5, whole genome... 46 1.2 1
(AM443038) Vitis vinifera contig VV78X043577.2, whole genome... 46 1.2 1
(AC216459) Populus trichocarpa clone POP074-L11, complete se... 46 1.2 1
(AC171726) Solanum lycopersicum chromosome 1 clone C01HBa008... 46 1.2 1
(EA170044) Sequence 34359 from patent US 7214786. 46 1.2 1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 46 1.2 1
(AP000894) Homo sapiens genomic DNA, chromosome 18 clone:RP1... 46 1.2 1
(AL356320) Human DNA sequence from clone RP11-201O14 on chro... 46 1.2 1
(AC217778) Homo sapiens chromosome 17, clone RP11-1022D1, co... 46 1.2 1
(AC217777) Homo sapiens chromosome 17, clone RP11-978P20, co... 46 1.2 1
(AC217775) Homo sapiens chromosome 17, clone RP11-619A10, co... 46 1.2 1
(AC217769) Homo sapiens chromosome 17, clone RP11-57A24, com... 46 1.2 1
(AC215654) Homo sapiens chromosome 17, clone RP11-1169G11, c... 46 1.2 1
(AC139677) Homo sapiens chromosome 17, clone RP11-1070B7, co... 46 1.2 1
(AC139026) Homo sapiens chromosome 17, clone CTD-2514I13, co... 46 1.2 1
(AC138688) Homo sapiens chromosome 17, clone RP11-300H14, co... 46 1.2 1
(AC138645) Homo sapiens chromosome 17, clone RP11-995C19, co... 46 1.2 1
(AC103810) Homo sapiens chromosome 17, clone RP11-927P21, co... 46 1.2 1
(AC090419) Homo sapiens chromosome 17, clone CTD-2107B16, co... 46 1.2 1
(AC046170) Homo sapiens chromosome 17, clone RP11-219F9, com... 46 1.2 1
(AC037487) Homo sapiens chromosome 17, clone RP11-583F2, com... 46 1.2 1
(AC011511) Homo sapiens chromosome 19 clone CTD-2369P2, comp... 46 1.2 1
(AC139032) Homo sapiens chromosome 17 clone CTD-2371G12 map ... 46 1.2 1
(AC138687) Homo sapiens chromosome 17 clone RP11-297E22 map ... 46 1.2 1
(AC135723) Homo sapiens clone CTD-2545H8, LOW-PASS SEQUENCE ... 46 1.2 1
(AC134778) Homo sapiens chromosome 17 clone RP11-612G4 map 1... 46 1.2 1
(FP236276) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(CU856173) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.2 1
(CU633719) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(CU606902) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(AC069134) Homo sapiens chromosome 17 clone RP11-583F2, WORK... 46 1.2 1
(CU467028) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.2 1
(AP009900) Lotus japonicus genomic DNA, clone: LjT39M07, TM2... 46 1.2 1
(AP007556) Lotus japonicus genomic DNA, chromosome 2, clone:... 46 1.2 1
(AP007463) Lotus japonicus genomic DNA, chromosome 2, clone:... 46 1.2 1
(AP000938) Homo sapiens genomic DNA, chromosome 18p11.3 clon... 46 1.2 1
(AP000931) Homo sapiens genomic DNA, chromosome 18p11.3 clon... 46 1.2 1
(AC234593) Solanum tuberosum chromosome 5 clone RH172E15, **... 46 1.2 1
(AC233472) Solanum tuberosum chromosome 5 clone RH101E03, **... 46 1.2 1
(AC201318) Strongylocentrotus purpuratus clone R3-16K6, WORK... 46 1.2 1
(AC180206) Strongylocentrotus purpuratus clone R3-3005F17, W... 46 1.2 1
(AC024182) Homo sapiens chromosome 19 clone RP11-197O4, WORK... 46 1.2 1
(AQ814042) HS_5253_B2_H05_SP6E RPCI-11 Human Male BAC Librar... 46 1.2 1
(AQ753859) HS_5382_A1_H04_MR RPCI-11 Human Male BAC Library ... 46 1.2 1
(AQ679182) HS_5424_A2_D11_T7A RPCI-11 Human Male BAC Library... 46 1.2 1
(AQ491350) RPCI-11-248I3.TV RPCI-11 Homo sapiens genomic clo... 46 1.2 1
(AQ390526) CITBI-E1-2545N17.TR CITBI-E1 Homo sapiens genomic... 46 1.2 1
(AQ378405) RPCI11-164C14.TJ RPCI-11 Homo sapiens genomic clo... 46 1.2 1
(AQ353022) CITBI-E1-2537L9.TR CITBI-E1 Homo sapiens genomic ... 46 1.2 1
(AQ334907) HS_5007_B2_C01_T7 RPCI11 Human Male BAC Library H... 46 1.2 1
(FH497459) CHO_OF4067xd10f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.2 1
(FH273001) CHO_OF4155xa08r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.2 1
(ET985447) CHO_OF223xl22f1.ab1 CHO_OF Nicotiana tabacum geno... 46 1.2 1
(ER862104) PPTB671TR Solanum tuberosum RHPOTKEY BAC ends Sol... 46 1.2 1
(ER839904) POTKS08TF Solanum tuberosum RHPOTKEY BAC ends Sol... 46 1.2 1
(ER798840) PPTFW32TR Solanum tuberosum RHPOTKEY BAC ends Sol... 46 1.2 1
(AQ231950) HS_3243_B1_F06_MR CIT Approved Human Genomic Sper... 46 1.2 1
(EJ645003) 1093012264591 Global-Ocean-Sampling_GS-29-01-01-1... 46 1.2 1
(EI937488) VUH2-81B14TV VUUBBa (VUH2) Vigna unguiculata geno... 46 1.2 1
(EI728948) CHORI51410H09TR BAC library from the primary brea... 46 1.2 1
(ED806120) MG__Bb0013P13r MG__Bb Mimulus guttatus genomic, g... 46 1.2 1
(CZ849155) OC__Ba0237A10.r OC__Ba Oryza coarctata genomic cl... 46 1.2 1
(CW877423) shS2kd21-87.g_083.ab1 Whole-genome shotgun librar... 46 1.2 1
(CL524171) SAO6E05 Flanking Sequence Tag of Oryza sativa T-D... 46 1.2 1
(CL038661) CH216-46J11_Sp6.1 CH216 Xenopus (Silurana) tropic... 46 1.2 1
(EL935432) Centeaurea_plate-013_H19.trimmed.seq Centaurea no... 46 1.2 1
(EG882917) EST_ssal_eve_25986 ssaleve thyroid Salmo salar cD... 46 1.2 1
(DY722907) EST_ssal_rgb2_78646 ssalrgb2 mixed_tissue Salmo s... 46 1.2 1
(DR560738) WS02620.C21.1_F18 WS-PP-N-A-12 Picea glauca cDNA ... 46 1.2 1
(AU061023) Dictyostelium discoideum slug cDNA, clone SLC659. 46 1.2 1
(CX305073) C16018G07SK ExocortL1 Citrus medica cDNA clone C1... 46 1.2 1
(CV994733) IpCGFr3_9_E08_23 IpCGFr3 Ictalurus punctatus cDNA... 46 1.2 1
(CO232616) WS0054.B21_I02 WS-PP-A-6 Picea glauca cDNA clone ... 46 1.2 1
(CN267506) 17000531496106 GRN_EB Homo sapiens cDNA 5', mRNA ... 46 1.2 1
(CJ835594) Triticum aestivum cDNA clone:whatlal9o10, 5' end. 46 1.2 1
(CJ825812) Triticum aestivum cDNA clone:whatlal19b21, 5' end. 46 1.2 1
(CJ627616) Triticum aestivum cDNA clone whcs12d23 5', Y.Ogih... 46 1.2 1
(CA599839) waw1c.pk004.a13 waw1c Triticum aestivum cDNA clon... 46 1.2 1
(BQ579563) WHE2971_H05_O09ZS Wheat dormant embryo cDNA libra... 46 1.2 1
(BJ299441) Triticum aestivum cDNA clone:whsl30g16, 3' end, s... 46 1.2 1
(BJ298318) Triticum aestivum cDNA clone:whsl24e21, 3' end, s... 46 1.2 1
(BJ298196) Triticum aestivum cDNA clone:whsl23m05, 3' end, s... 46 1.2 1
(BJ273164) Triticum aestivum cDNA clone:whoh15o10, 3' end, s... 46 1.2 1
(BJ214908) Triticum aestivum cDNA clone:wh4k04, 3' end, sing... 46 1.2 1
(AA913278) om21d09.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA ... 46 1.2 1
(GE776433) EST_ssal_rgf_844889 ssalrgf mixed_tissue full-len... 46 1.2 1
(FD065026) CBPO8956.g1 CBPO: Normalized channel catfish cDNA... 46 1.2 1
(FD065025) CBPO8956.b1 CBPO: Normalized channel catfish cDNA... 46 1.2 1
(FD060228) CBPO6324.g1 CBPO: Normalized channel catfish cDNA... 46 1.2 1
(FD060227) CBPO6324.b1 CBPO: Normalized channel catfish cDNA... 46 1.2 1
(EX370411) GQ03219.B7_H02 GQ032 - Shoot tip (Normalized libr... 46 1.2 1
(BX119985) Zebrafish DNA sequence from clone CH211-270B10 in... 42 1.3 2
(BJ418295) Dictyostelium discoideum cDNA clone:ddv32c12, 5' ... 40 1.4 2
(CR847827) Zebrafish DNA sequence from clone DKEY-102M20 in ... 40 1.5 2
(DE283220) Oryzias latipes DNA, clone: ola1-242F07.R, genomi... 34 1.5 2
(AM428394) Vitis vinifera contig VV78X125212.1, whole genome... 42 1.5 2
(BX000452) Zebrafish DNA sequence from clone DKEY-12J12 in l... 42 1.6 2
(FF313055) 279387034 Pea aphid whole body normalized full le... 38 1.6 2
(BX950179) Zebrafish DNA sequence from clone DKEY-27P23 in l... 42 1.6 2
(EC825324) SME00005313 esmbsro2 Sawyeria marylandensis cDNA,... 34 1.7 2
(FF300182) 279336290 Pea aphid whole body normalized full le... 38 1.7 2
(CW899685) RPCI42_135F19.TV RPCI-42 Bos taurus genomic clone... 34 1.7 2
(AC094752) Rattus norvegicus clone CH230-5H14, *** SEQUENCIN... 42 1.8 2
(CT009722) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 2.2 2
(CT573061) Zebrafish DNA sequence from clone DKEY-165F9 in l... 42 2.3 2
(AY686474) Mus musculus strain 129S6/SvEvTac chromosome 6 cl... 38 2.4 3
(AM428512) Vitis vinifera contig VV78X199510.6, whole genome... 38 2.4 2
(CU633785) Zebrafish DNA sequence from clone CH73-301C19 in ... 40 2.4 2
(AM437277) Vitis vinifera contig VV78X074565.5, whole genome... 36 2.5 2
(AY857643) Danio rerio interferon regulatory factor 6 (irf6)... 36 2.8 2
(AC164570) Mus musculus BAC clone CH25-194I22 from chromosom... 40 2.9 2
(CU137652) Zebrafish DNA sequence from clone DKEY-70B23 in l... 44 3.2 3
(CU741141) A BAC library has been constructed from PN40024 g... 38 3.7 2
(BX914215) Zebrafish DNA sequence from clone DKEY-245F7 in l... 40 3.8 2
(AC112845) Rattus norvegicus clone CH230-127J16, *** SEQUENC... 40 4.0 3
(Z80216) Caenorhabditis elegans Cosmid F10G8. 44 4.1 2
(AC116682) Mus musculus chromosome 15 clone RP24-475F22 map ... 40 4.1 2
(AC121101) Mus musculus chromosome 8, clone RP24-511A8, comp... 40 4.2 2
(AC231235) Cavia porcellus clone CH234-74P14, WORKING DRAFT ... 40 4.3 2
(AC149630) Rhinolophus ferrumequinum clone VMRC7-251C10, com... 40 4.3 2
(AC186239) Cavia porcellus clone CH234-112P3, WORKING DRAFT ... 40 4.4 2
(AL732520) Mouse DNA sequence from clone RP23-123E1 on chrom... 44 4.4 2
(AC104833) Mus Musculus Strain C57BL6/J Chromosome 15 BAC, R... 40 4.5 2
(BX957307) Zebrafish DNA sequence from clone CH211-117E20 in... 40 4.5 2
(AL929514) Zebrafish DNA sequence from clone CH211-187D9 in ... 38 4.6 2
(AC202274) Rhesus Macaque BAC CH250-243E6 () complete seque... 40 4.6 2
(AC175989) Strongylocentrotus purpuratus clone R3-17I22, WOR... 40 4.7 2
(FJ151068) Afrixalus paradorsalis 12S ribosomal RNA gene, pa... 44 4.7 1
(CU076099) Zebrafish DNA sequence from clone CH211-51H21 in ... 44 4.7 1
(CT955984) Zebrafish DNA sequence from clone CH73-165P10 in ... 44 4.7 1
(CT583678) Zebrafish DNA sequence from clone DKEYP-106C11 in... 44 4.7 1
(CT573493) Zebrafish DNA sequence from clone DKEY-228B12 in ... 44 4.7 1
(CT027716) Zebrafish DNA sequence from clone DKEY-32M20 in l... 44 4.7 1
(CT027703) Zebrafish DNA sequence from clone CH211-268L2 in ... 44 4.7 1
(CR954145) Zebrafish DNA sequence from clone DKEY-106N22 in ... 44 4.7 1
(CR848036) Zebrafish DNA sequence from clone DKEY-76C17 in l... 44 4.7 1
(CR847905) Zebrafish DNA sequence from clone CH211-244M18 in... 44 4.7 1
(CR847868) Zebrafish DNA sequence from clone DKEYP-99G4 in l... 44 4.7 1
(CR847834) Zebrafish DNA sequence from clone CH211-197E21 in... 44 4.7 1
(CR759896) Zebrafish DNA sequence from clone DKEY-192J17 in ... 44 4.7 1
(CR450803) Zebrafish DNA sequence from clone DKEY-11O18 in l... 44 4.7 1
(CR450730) Zebrafish DNA sequence from clone DKEY-43P5 in li... 44 4.7 1
(CR406336) Gallus gallus finished cDNA, clone ChEST864o18. 44 4.7 1
(CR391983) Zebrafish DNA sequence from clone DKEY-61O7 in li... 44 4.7 1
(CR354558) Zebrafish DNA sequence from clone CH211-12A23 in ... 44 4.7 1
(BX649501) Zebrafish DNA sequence from clone DKEY-123F20 in ... 44 4.7 1
(BX548007) Zebrafish DNA sequence from clone CH211-93A2 in l... 44 4.7 1
(BX465208) Zebrafish DNA sequence from clone DKEYP-91H6 in l... 44 4.7 1
(BX321890) Zebrafish DNA sequence from clone CH211-258D5 in ... 44 4.7 1
(BX296537) Zebrafish DNA sequence from clone CH211-249G3 in ... 44 4.7 1
(BX005183) Zebrafish DNA sequence from clone CH211-136A14 in... 44 4.7 1
(BC108033) Danio rerio SRY-box containing gene 14, mRNA (cDN... 44 4.7 1
(AL928800) Zebrafish DNA sequence from clone CH211-233G21 in... 44 4.7 1
(AF106940) Gallus gallus hyaluronan synthase 2 (HAS2) mRNA, ... 44 4.7 1
(BV600036) S217P60920FD1.T0 Noemie Pan troglodytes troglodyt... 44 4.7 1
(BV206210) sqnm220348 Human DNA (Sequenom) Homo sapiens STS ... 44 4.7 1
(BV188660) sqnm160535 Human DNA (Sequenom) Homo sapiens STS ... 44 4.7 1
(X99946) M.musculus 94kb genomic sequence encoding Tsx gene. 44 4.7 1
(U41395) Mus musculus X inactive specific transcript (Xist) ... 44 4.7 1
(AL805923) Mouse DNA sequence from clone RP23-65B16 on chrom... 44 4.7 1
(AL669964) Mouse DNA sequence from clone RP23-11P22 on chrom... 44 4.7 1
(AL596187) Mouse DNA sequence from clone RP23-287H9 on chrom... 44 4.7 1
(AJ421479) Mus musculus X-inactivation center region; segmen... 44 4.7 1
(AC160462) Mus musculus chromosome 1, clone RP23-225K21, com... 44 4.7 1
(AC158948) Mus musculus chromosome 1, clone RP24-263I3, comp... 44 4.7 1
(AC154531) Mus musculus BAC clone RP23-468B10 from chromosom... 44 4.7 1
(AC133871) Mus musculus chromosome 1, clone RP24-414I11, com... 44 4.7 1
(AC133574) Mus musculus strain C57BL/6J clone rp23-35b9, com... 44 4.7 1
(AC133488) Mus musculus strain C57BL/6J clone rp23-432e14, c... 44 4.7 1
(AC129321) Mus musculus BAC clone RP24-160I20 from 8, comple... 44 4.7 1
(AC124115) Mus musculus chromosome 10, clone RP24-377E13, co... 44 4.7 1
(AC102361) Mus musculus chromosome 18, clone RP23-37I2, comp... 44 4.7 1
(AC008019) Mus musculus strain 129S6/SvEvTac chromosome 16 c... 44 4.7 1
(AC003067) Mus musculus Chromosome 16 BAC Clone tbx3 Synteni... 44 4.7 1
(AC003066) Mus musculus Chromosome 16 BAC Clone tbx1 Synteni... 44 4.7 1
(AC197280) Macaca mulatta BAC CH250-229E14 (Children's Hosp... 44 4.7 1
(AC196451) Rhesus Macaque BAC CH250-452G10 () complete sequ... 44 4.7 1
(AM478391) Vitis vinifera contig VV78X153147.31, whole genom... 44 4.7 1
(AM470601) Vitis vinifera, whole genome shotgun sequence, co... 44 4.7 1
(AM462952) Vitis vinifera contig VV79X001842.3, whole genome... 44 4.7 1
(AM457834) Vitis vinifera contig VV78X237124.5, whole genome... 44 4.7 1
(AM451133) Vitis vinifera contig VV78X062997.4, whole genome... 44 4.7 1
(AM432959) Vitis vinifera contig VV78X043318.12, whole genom... 44 4.7 1
(AM432727) Vitis vinifera contig VV78X275021.7, whole genome... 44 4.7 1
(AM270014) Aspergillus niger contig An02c0190, complete genome. 44 4.7 1
(AC189640) Brassica rapa subsp. pekinensis clone KBrS006L21,... 44 4.7 1
(AC174361) Medicago truncatula chromosome 8 clone mth2-39o9,... 44 4.7 1
(AC157757) Medicago truncatula clone mth2-16j22, complete se... 44 4.7 1
(AC146791) Medicago truncatula chromosome 8 clone mth2-123m1... 44 4.7 1
(AC135800) Medicago truncatula clone mth2-14g8, complete seq... 44 4.7 1
(DL465347) COMPOSITIONS, KITS, AND METHODS FOR IDENTIFICATIO... 44 4.7 1
(DD139832) Methods of Diagnosis of Breast Cancer, Compositio... 44 4.7 1
(CS483547) Sequence 115 from Patent EP1754795. 44 4.7 1
(CS239346) Sequence 174 from Patent WO2005118858. 44 4.7 1
(CS052300) Sequence 9 from Patent WO2005021788. 44 4.7 1
(CS052298) Sequence 7 from Patent WO2005021788. 44 4.7 1
(CQ858158) Sequence 217 from Patent WO2004069189. 44 4.7 1
(CQ858121) Sequence 180 from Patent WO2004069189. 44 4.7 1
(CQ858120) Sequence 179 from Patent WO2004069189. 44 4.7 1
(AX829126) Sequence 19 from Patent WO02059377. 44 4.7 1
(AX375530) Sequence 5 from Patent WO0198543. 44 4.7 1
(GM773998) Sequence 9 from Patent EP1980629. 44 4.7 1
(GM773996) Sequence 7 from Patent EP1980629. 44 4.7 1
(GC698860) Sequence 14105 from patent US 6812339. 44 4.7 1
(GC696840) Sequence 12085 from patent US 6812339. 44 4.7 1
(AR547984) Sequence 3115 from patent US 6747137. 44 4.7 1
(CR932210) Paramecium tetraurelia, UNC119F, UNC119 homologue... 44 4.7 1
(AY160104) Dictyostelium discoideum nucleotide exchange fact... 44 4.7 1
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6... 44 4.7 1
(AE014829) Plasmodium falciparum 3D7 chromosome 10 section 1... 44 4.7 1
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 44 4.7 1
(AC189734) Trichinella spiralis BAC clone TS195-20H12 from c... 44 4.7 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 44 4.7 1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 44 4.7 1
(AC092212) Trypanosoma brucei chromosome 8 clone RPCI93-10J1... 44 4.7 1
(X17059) Human NAT1 gene for arylamine N-acetyltransferase. 44 4.7 1
(U80835) Human acetyltransferase (NAT1) gene, variant allele... 44 4.7 1
(S78829) NATI (NATI*10)=acetyltransferase 1 {3' region, poly... 44 4.7 1
(EU518937) Homo sapiens NEL-like 1 (chicken) (NELL1) gene, c... 44 4.7 1
(D90041) Homo sapiens mRNA for arylamine N-acetyltransferase... 44 4.7 1
(DQ305975) Homo sapiens isolate Thai59-2 arylamine N-acetylt... 44 4.7 1
(DQ305974) Homo sapiens isolate Thai59-1 arylamine N-acetylt... 44 4.7 1
(DQ305973) Homo sapiens isolate Thai58-2 arylamine N-acetylt... 44 4.7 1
(DQ305972) Homo sapiens isolate Thai58-1 arylamine N-acetylt... 44 4.7 1
(DQ305971) Homo sapiens isolate Thai57-2 arylamine N-acetylt... 44 4.7 1
(DQ305970) Homo sapiens isolate Thai57-1 arylamine N-acetylt... 44 4.7 1
(DQ305969) Homo sapiens isolate Thai52-2 arylamine N-acetylt... 44 4.7 1
(DQ305968) Homo sapiens isolate Thai52-1 arylamine N-acetylt... 44 4.7 1
(DQ305967) Homo sapiens isolate Thai49-2 arylamine N-acetylt... 44 4.7 1
(DQ305966) Homo sapiens isolate Thai49-1 arylamine N-acetylt... 44 4.7 1
(DQ305965) Homo sapiens isolate Thai47-2 arylamine N-acetylt... 44 4.7 1
(DQ305964) Homo sapiens isolate Thai47-1 arylamine N-acetylt... 44 4.7 1
(DQ305963) Homo sapiens isolate Thai25-2 arylamine N-acetylt... 44 4.7 1
(DQ305962) Homo sapiens isolate Thai25-1 arylamine N-acetylt... 44 4.7 1
(DQ305961) Homo sapiens isolate Thai24-2 arylamine N-acetylt... 44 4.7 1
(DQ305960) Homo sapiens isolate Thai24-1 arylamine N-acetylt... 44 4.7 1
(DQ305959) Homo sapiens isolate Thai16-2 arylamine N-acetylt... 44 4.7 1
(DQ305958) Homo sapiens isolate Thai16-1 arylamine N-acetylt... 44 4.7 1
(DQ305957) Homo sapiens isolate Thai14-2 arylamine N-acetylt... 44 4.7 1
(DQ305956) Homo sapiens isolate Thai14-1 arylamine N-acetylt... 44 4.7 1
(DQ305955) Homo sapiens isolate Thai13-2 arylamine N-acetylt... 44 4.7 1
(DQ305954) Homo sapiens isolate Thai13-1 arylamine N-acetylt... 44 4.7 1
(DQ305953) Homo sapiens isolate Thai12-2 arylamine N-acetylt... 44 4.7 1
(DQ305952) Homo sapiens isolate Thai12-1 arylamine N-acetylt... 44 4.7 1
(DQ305951) Homo sapiens isolate Thai09-2 arylamine N-acetylt... 44 4.7 1
(DQ305950) Homo sapiens isolate Thai09-1 arylamine N-acetylt... 44 4.7 1
(DQ305949) Homo sapiens isolate Thai02-2 arylamine N-acetylt... 44 4.7 1
(DQ305948) Homo sapiens isolate Thai02-1 arylamine N-acetylt... 44 4.7 1
(DQ305947) Homo sapiens isolate Sar81-2 arylamine N-acetyltr... 44 4.7 1
(DQ305946) Homo sapiens isolate Sar81-1 arylamine N-acetyltr... 44 4.7 1
(DQ305945) Homo sapiens isolate Sar77-2 arylamine N-acetyltr... 44 4.7 1
(DQ305944) Homo sapiens isolate Sar77-1 arylamine N-acetyltr... 44 4.7 1
(DQ305943) Homo sapiens isolate Sar73-2 arylamine N-acetyltr... 44 4.7 1
(DQ305942) Homo sapiens isolate Sar73-1 arylamine N-acetyltr... 44 4.7 1
(DQ305941) Homo sapiens isolate Sar62-2 arylamine N-acetyltr... 44 4.7 1
(DQ305940) Homo sapiens isolate Sar62-1 arylamine N-acetyltr... 44 4.7 1
(DQ305939) Homo sapiens isolate Sar54-2 arylamine N-acetyltr... 44 4.7 1
(DQ305938) Homo sapiens isolate Sar54-1 arylamine N-acetyltr... 44 4.7 1
(DQ305937) Homo sapiens isolate Sar42-2 arylamine N-acetyltr... 44 4.7 1
(DQ305936) Homo sapiens isolate Sar42-1 arylamine N-acetyltr... 44 4.7 1
(DQ305935) Homo sapiens isolate SaaH04-2 arylamine N-acetylt... 44 4.7 1
(DQ305934) Homo sapiens isolate SaaH04-1 arylamine N-acetylt... 44 4.7 1
(DQ305933) Homo sapiens isolate SaaH01-2 arylamine N-acetylt... 44 4.7 1
(DQ305932) Homo sapiens isolate SaaH01-1 arylamine N-acetylt... 44 4.7 1
(DQ305931) Homo sapiens isolate SaaG04-2 arylamine N-acetylt... 44 4.7 1
(DQ305930) Homo sapiens isolate SaaG04-1 arylamine N-acetylt... 44 4.7 1
(DQ305929) Homo sapiens isolate SaaF04-2 arylamine N-acetylt... 44 4.7 1
(DQ305928) Homo sapiens isolate SaaF04-1 arylamine N-acetylt... 44 4.7 1
(DQ305927) Homo sapiens isolate SaaF01-2 arylamine N-acetylt... 44 4.7 1
(DQ305926) Homo sapiens isolate SaaF01-1 arylamine N-acetylt... 44 4.7 1
(DQ305925) Homo sapiens isolate SaaD01-2 arylamine N-acetylt... 44 4.7 1
(DQ305924) Homo sapiens isolate SaaD01-1 arylamine N-acetylt... 44 4.7 1
(DQ305923) Homo sapiens isolate SaaC01-2 arylamine N-acetylt... 44 4.7 1
(DQ305922) Homo sapiens isolate SaaC01-1 arylamine N-acetylt... 44 4.7 1
(DQ305921) Homo sapiens isolate SaaB04-2 arylamine N-acetylt... 44 4.7 1
(DQ305920) Homo sapiens isolate SaaB04-1 arylamine N-acetylt... 44 4.7 1
(DQ305919) Homo sapiens isolate SaaB01-2 arylamine N-acetylt... 44 4.7 1
(DQ305918) Homo sapiens isolate SaaB01-1 arylamine N-acetylt... 44 4.7 1
(DQ305917) Homo sapiens isolate SaaA01-2 arylamine N-acetylt... 44 4.7 1
(DQ305916) Homo sapiens isolate SaaA01-1 arylamine N-acetylt... 44 4.7 1
(DQ305915) Homo sapiens isolate Pyg80-2 arylamine N-acetyltr... 44 4.7 1
(DQ305914) Homo sapiens isolate Pyg80-1 arylamine N-acetyltr... 44 4.7 1
(DQ305913) Homo sapiens isolate Pyg76-2 arylamine N-acetyltr... 44 4.7 1
(DQ305912) Homo sapiens isolate Pyg76-1 arylamine N-acetyltr... 44 4.7 1
(DQ305911) Homo sapiens isolate Pyg75-2 arylamine N-acetyltr... 44 4.7 1
(DQ305910) Homo sapiens isolate Pyg75-1 arylamine N-acetyltr... 44 4.7 1
(DQ305909) Homo sapiens isolate Pyg74-2 arylamine N-acetyltr... 44 4.7 1
(DQ305908) Homo sapiens isolate Pyg74-1 arylamine N-acetyltr... 44 4.7 1
(DQ305907) Homo sapiens isolate Pyg73-2 arylamine N-acetyltr... 44 4.7 1
(DQ305906) Homo sapiens isolate Pyg73-1 arylamine N-acetyltr... 44 4.7 1
(DQ305905) Homo sapiens isolate Pyg72-2 arylamine N-acetyltr... 44 4.7 1
(DQ305904) Homo sapiens isolate Pyg72-1 arylamine N-acetyltr... 44 4.7 1
(DQ305903) Homo sapiens isolate Pyg63-2 arylamine N-acetyltr... 44 4.7 1
(DQ305902) Homo sapiens isolate Pyg63-1 arylamine N-acetyltr... 44 4.7 1
(DQ305901) Homo sapiens isolate Pyg37-2 arylamine N-acetyltr... 44 4.7 1
(DQ305900) Homo sapiens isolate Pyg37-1 arylamine N-acetyltr... 44 4.7 1
(DQ305899) Homo sapiens isolate Pyg29-2 arylamine N-acetyltr... 44 4.7 1
(DQ305898) Homo sapiens isolate Pyg29-1 arylamine N-acetyltr... 44 4.7 1
(DQ305897) Homo sapiens isolate Pyg24-2 arylamine N-acetyltr... 44 4.7 1
(DQ305896) Homo sapiens isolate Pyg24-1 arylamine N-acetyltr... 44 4.7 1
(DQ305895) Homo sapiens isolate Guj45-2 arylamine N-acetyltr... 44 4.7 1
(DQ305894) Homo sapiens isolate Guj45-1 arylamine N-acetyltr... 44 4.7 1
(DQ305893) Homo sapiens isolate Guj42-2 arylamine N-acetyltr... 44 4.7 1
(DQ305892) Homo sapiens isolate Guj42-1 arylamine N-acetyltr... 44 4.7 1
(DQ305891) Homo sapiens isolate Guj40-2 arylamine N-acetyltr... 44 4.7 1
(DQ305890) Homo sapiens isolate Guj40-1 arylamine N-acetyltr... 44 4.7 1
(DQ305889) Homo sapiens isolate Guj35-2 arylamine N-acetyltr... 44 4.7 1
(DQ305888) Homo sapiens isolate Guj35-1 arylamine N-acetyltr... 44 4.7 1
(DQ305887) Homo sapiens isolate Guj33-2 arylamine N-acetyltr... 44 4.7 1
(DQ305886) Homo sapiens isolate Guj33-1 arylamine N-acetyltr... 44 4.7 1
(DQ305885) Homo sapiens isolate Guj27-2 arylamine N-acetyltr... 44 4.7 1
(DQ305884) Homo sapiens isolate Guj27-1 arylamine N-acetyltr... 44 4.7 1
(DQ305883) Homo sapiens isolate Guj23-2 arylamine N-acetyltr... 44 4.7 1
(DQ305882) Homo sapiens isolate Guj23-1 arylamine N-acetyltr... 44 4.7 1
(DQ305881) Homo sapiens isolate Guj22-2 arylamine N-acetyltr... 44 4.7 1
(DQ305880) Homo sapiens isolate Guj22-1 arylamine N-acetyltr... 44 4.7 1
(DQ305879) Homo sapiens isolate Guj21-2 arylamine N-acetyltr... 44 4.7 1
(DQ305878) Homo sapiens isolate Guj21-1 arylamine N-acetyltr... 44 4.7 1
(DQ305877) Homo sapiens isolate Guj19-2 arylamine N-acetyltr... 44 4.7 1
(DQ305876) Homo sapiens isolate Guj19-1 arylamine N-acetyltr... 44 4.7 1
(DQ305875) Homo sapiens isolate Gab9080-2 arylamine N-acetyl... 44 4.7 1
(DQ305874) Homo sapiens isolate Gab9080-1 arylamine N-acetyl... 44 4.7 1
(DQ305873) Homo sapiens isolate Gab68-2 arylamine N-acetyltr... 44 4.7 1
(DQ305872) Homo sapiens isolate Gab68-1 arylamine N-acetyltr... 44 4.7 1
(DQ305871) Homo sapiens isolate Gab65-2 arylamine N-acetyltr... 44 4.7 1
(DQ305870) Homo sapiens isolate Gab65-1 arylamine N-acetyltr... 44 4.7 1
(DQ305869) Homo sapiens isolate Gab5012-2 arylamine N-acetyl... 44 4.7 1
(DQ305868) Homo sapiens isolate Gab5012-1 arylamine N-acetyl... 44 4.7 1
(DQ305867) Homo sapiens isolate Gab4843-2 arylamine N-acetyl... 44 4.7 1
(DQ305866) Homo sapiens isolate Gab4843-1 arylamine N-acetyl... 44 4.7 1
(DQ305865) Homo sapiens isolate Gab4063-2 arylamine N-acetyl... 44 4.7 1
(DQ305864) Homo sapiens isolate Gab4063-1 arylamine N-acetyl... 44 4.7 1
(DQ305863) Homo sapiens isolate Gab2417-2 arylamine N-acetyl... 44 4.7 1
(DQ305862) Homo sapiens isolate Gab2417-1 arylamine N-acetyl... 44 4.7 1
(DQ305861) Homo sapiens isolate Gab2210-2 arylamine N-acetyl... 44 4.7 1
(DQ305860) Homo sapiens isolate Gab2210-1 arylamine N-acetyl... 44 4.7 1
(DQ305859) Homo sapiens isolate Gab1113-2 arylamine N-acetyl... 44 4.7 1
(DQ305858) Homo sapiens isolate Gab1113-1 arylamine N-acetyl... 44 4.7 1
(DQ305857) Homo sapiens isolate Gab1009-2 arylamine N-acetyl... 44 4.7 1
(DQ305856) Homo sapiens isolate Gab1009-1 arylamine N-acetyl... 44 4.7 1
(DQ305855) Homo sapiens isolate Fre6613-2 arylamine N-acetyl... 44 4.7 1
(DQ305854) Homo sapiens isolate Fre6613-1 arylamine N-acetyl... 44 4.7 1
(DQ305853) Homo sapiens isolate Fre4503-2 arylamine N-acetyl... 44 4.7 1
(DQ305852) Homo sapiens isolate Fre4503-1 arylamine N-acetyl... 44 4.7 1
(DQ305851) Homo sapiens isolate Fre3703-2 arylamine N-acetyl... 44 4.7 1
(DQ305850) Homo sapiens isolate Fre3703-1 arylamine N-acetyl... 44 4.7 1
(DQ305849) Homo sapiens isolate Fre3503-2 arylamine N-acetyl... 44 4.7 1
(DQ305848) Homo sapiens isolate Fre3503-1 arylamine N-acetyl... 44 4.7 1
(DQ305847) Homo sapiens isolate Fre2803-2 arylamine N-acetyl... 44 4.7 1
(DQ305846) Homo sapiens isolate Fre2803-1 arylamine N-acetyl... 44 4.7 1
(DQ305845) Homo sapiens isolate Fre2303-2 arylamine N-acetyl... 44 4.7 1
(DQ305844) Homo sapiens isolate Fre2303-1 arylamine N-acetyl... 44 4.7 1
(DQ305843) Homo sapiens isolate Fre2103-2 arylamine N-acetyl... 44 4.7 1
(DQ305842) Homo sapiens isolate Fre2103-1 arylamine N-acetyl... 44 4.7 1
(DQ305841) Homo sapiens isolate Fre1703-2 arylamine N-acetyl... 44 4.7 1
(DQ305840) Homo sapiens isolate Fre1703-1 arylamine N-acetyl... 44 4.7 1
(DQ305839) Homo sapiens isolate Fre1203-2 arylamine N-acetyl... 44 4.7 1
(DQ305838) Homo sapiens isolate Fre1203-1 arylamine N-acetyl... 44 4.7 1
(DQ305837) Homo sapiens isolate Fre0203-2 arylamine N-acetyl... 44 4.7 1
(DQ305836) Homo sapiens isolate Fre0203-1 arylamine N-acetyl... 44 4.7 1
(DQ305835) Homo sapiens isolate Ask1830-2 arylamine N-acetyl... 44 4.7 1
(DQ305834) Homo sapiens isolate Ask1830-1 arylamine N-acetyl... 44 4.7 1
(DQ305833) Homo sapiens isolate Ask1817-2 arylamine N-acetyl... 44 4.7 1
(DQ305832) Homo sapiens isolate Ask1817-1 arylamine N-acetyl... 44 4.7 1
(DQ305831) Homo sapiens isolate Ask1751-2 arylamine N-acetyl... 44 4.7 1
(DQ305830) Homo sapiens isolate Ask1751-1 arylamine N-acetyl... 44 4.7 1
(DQ305829) Homo sapiens isolate Ask1399-2 arylamine N-acetyl... 44 4.7 1
(DQ305828) Homo sapiens isolate Ask1399-1 arylamine N-acetyl... 44 4.7 1
(DQ305827) Homo sapiens isolate Ask1267-2 arylamine N-acetyl... 44 4.7 1
(DQ305826) Homo sapiens isolate Ask1267-1 arylamine N-acetyl... 44 4.7 1
(DQ305825) Homo sapiens isolate Ask1254-2 arylamine N-acetyl... 44 4.7 1
(DQ305824) Homo sapiens isolate Ask1254-1 arylamine N-acetyl... 44 4.7 1
(DQ305823) Homo sapiens isolate Ask1235-2 arylamine N-acetyl... 44 4.7 1
(DQ305822) Homo sapiens isolate Ask1235-1 arylamine N-acetyl... 44 4.7 1
(DQ305821) Homo sapiens isolate Ask1162-2 arylamine N-acetyl... 44 4.7 1
(DQ305820) Homo sapiens isolate Ask1162-1 arylamine N-acetyl... 44 4.7 1
(DQ305819) Homo sapiens isolate Ask1149-2 arylamine N-acetyl... 44 4.7 1
(DQ305818) Homo sapiens isolate Ask1149-1 arylamine N-acetyl... 44 4.7 1
(DQ305817) Homo sapiens isolate Ask1102-2 arylamine N-acetyl... 44 4.7 1
(DQ305816) Homo sapiens isolate Ask1102-1 arylamine N-acetyl... 44 4.7 1
(BX647521) Homo sapiens mRNA; cDNA DKFZp686D09211 (from clon... 44 4.7 1
(BC047666) Homo sapiens N-acetyltransferase 1 (arylamine N-a... 44 4.7 1
(BC013732) Homo sapiens, similar to N-acetyltransferase 1 (a... 44 4.7 1
(AY800271) Homo sapiens N-acetyltransferase 1 (arylamine N-a... 44 4.7 1
(AY376850) Homo sapiens arylamine N-acetyltransferase 1 vari... 44 4.7 1
(AY338489) Homo sapiens N-acetyltransferase 1 (arylamine N-a... 44 4.7 1
(AP006208) Homo sapiens genomic DNA, chromosome 8, clone:RP1... 44 4.7 1
(AK290912) Homo sapiens cDNA FLJ77099 complete cds, highly s... 44 4.7 1
(AJ581143) Homo sapiens partial mRNA for arylamine N-acetylt... 44 4.7 1
(AJ581142) Homo sapiens partial mRNA for arylamine N-acetylt... 44 4.7 1
(AJ307007) Homo sapiens NAT1 gene for arylamine N-acetyltran... 44 4.7 1
(AJ278017) Homo sapiens NAT1 gene for arylamine N-acetyltran... 44 4.7 1
(AF308866) Homo sapiens arylamine N-acetyltransferase 1 (NAT... 44 4.7 1
(AF082904) Homo sapiens N-acetyltransferase-1 (NAT1) gene, N... 44 4.7 1
(AF082903) Homo sapiens N-acetyltransferase-1 (NAT1) gene, N... 44 4.7 1
(AF071552) Homo sapiens N-acetyltransferase-1 (NAT1) gene, N... 44 4.7 1
(AF067408) Homo sapiens N-acetyltransferase-1 (NAT1) gene, N... 44 4.7 1
(AF032678) Homo sapiens N-acetyltransferase NAT1 (allele NAT... 44 4.7 1
(AF032677) Homo sapiens N-acetyltransferase NAT1 (allele NAT... 44 4.7 1
(AF008204) Homo sapiens mutant arylamine N-acetyltransferase... 44 4.7 1
(AC124242) Homo sapiens chromosome 8, clone CTD-2547L16, com... 44 4.7 1
(AC108157) Homo sapiens BAC clone RP11-580P21 from 4, comple... 44 4.7 1
(AC097525) Homo sapiens BAC clone RP11-627E8 from 2, complet... 44 4.7 1
(AC069575) Homo sapiens chromosome 11, clone RP11-771G24, co... 44 4.7 1
(AC026784) Homo sapiens chromosome 5 clone CTD-2138O14, comp... 44 4.7 1
(AC026405) Homo sapiens chromosome 5 clone CTC-347N9, comple... 44 4.7 1
(AC025062) Homo sapiens chromosome 8, clone RP11-685B14, com... 44 4.7 1
(AC023905) Homo sapiens chromosome 15 clone CTD-2050N2 map 1... 44 4.7 1
(AC011445) Homo sapiens chromosome 19 clone CTC-246B18, comp... 44 4.7 1
(AC010811) Homo sapiens chromosome 11, clone RP11-3E17, comp... 44 4.7 1
(AC009558) Homo sapiens chromosome 15, clone RP11-142J21, co... 44 4.7 1
(AC146991) Lytechinus variegatus clone BLV-86E23, WORKING DR... 44 4.7 1
(AC142562) Bos taurus clone RP42-371H23, WORKING DRAFT SEQUE... 44 4.7 1
(AC136551) Rattus norvegicus clone CH230-266F24, *** SEQUENC... 44 4.7 1
(AC136508) Pan troglodytes clone rp43-14n19, WORKING DRAFT S... 44 4.7 1
(AC136282) Rattus norvegicus clone CH230-5L8, *** SEQUENCING... 44 4.7 1
(AC136193) Pan troglodytes clone CH251-360F6, WORKING DRAFT ... 44 4.7 1
(AC136116) Rattus norvegicus clone CH230-140L5, *** SEQUENCI... 44 4.7 1
(AC125800) Rattus norvegicus clone CH230-7H18, *** SEQUENCIN... 44 4.7 1
(AC122655) Rattus norvegicus clone CH230-238D17, *** SEQUENC... 44 4.7 1
(AC120200) Danio rerio strain Tue clone CH211-247D19, WORKIN... 44 4.7 1
(AC114281) Homo sapiens chromosome 5 clone CTD-2306N9, WORKI... 44 4.7 1
(AC113101) Mus musculus clone RP23-318N14, LOW-PASS SEQUENCE... 44 4.7 1
(AC103295) Rattus norvegicus clone CH230-134K10, *** SEQUENC... 44 4.7 1
(AC103242) Rattus norvegicus clone CH230-41N13, WORKING DRAF... 44 4.7 1
(AC095952) Rattus norvegicus clone CH230-11A16, WORKING DRAF... 44 4.7 1
(AC095084) Rattus norvegicus clone CH230-7C22, *** SEQUENCIN... 44 4.7 1
(CU929521) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 4.7 1
(CU929512) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 4.7 1
(CU929357) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 4.7 1
(CU928115) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.7 1
(CU928046) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 4.7 1
(CU855924) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 4.7 1
(AC041042) Homo sapiens chromosome 5 clone RP11-97L2, WORKIN... 44 4.7 1
(AC025843) Homo sapiens chromosome 15 clone RP11-313A9 map 1... 44 4.7 1
(CU463096) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 4.7 1
(CU138574) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 4.7 1

>(AU038206) Dictyostelium discoideum slug cDNA, clone SSH415.
Length = 457

Score = 159 bits (80), Expect(3) = 1e-62
Identities = 80/80 (100%)
Strand = Plus / Plus


Query: 92 caaatcacaagctcactcactcacaaacacactaacccaataacctgaccaaacacaata 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 caaatcacaagctcactcactcacaaacacactaacccaataacctgaccaaacacaata 139


Query: 152 attttcaatggtctcacttt 171
||||||||||||||||||||
Sbjct: 140 attttcaatggtctcacttt 159

Score = 79.8 bits (40), Expect(3) = 1e-62
Identities = 40/40 (100%)
Strand = Plus / Plus


Query: 417 ctatttttgtagtaacaaattttatatcgcgaaatatttt 456
||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctatttttgtagtaacaaattttatatcgcgaaatatttt 444

Score = 60.0 bits (30), Expect(3) = 1e-62
Identities = 30/30 (100%)
Strand = Plus / Plus


Query: 27 aagtttttcaaataataataataatataat 56
||||||||||||||||||||||||||||||
Sbjct: 16 aagtttttcaaataataataataatataat 45

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 228,466,849
Number of extensions: 21697477
Number of successful extensions: 5772309
Number of sequences better than 10.0: 676
Length of query: 468
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 445
Effective length of database: 99,442,330,388
Effective search space: 44251837022660
Effective search space used: 44251837022660
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.30
Homology vs Protein
Query= Contig-U04631-1 (Contig-U04631-1Q) /CSM_Contig/Contig-U04631-1Q.Seq.d
(468 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54C88) RecName: Full=Uncharacterized protein DDB_G0293104; 37 0.22

>(Q54C88) RecName: Full=Uncharacterized protein DDB_G0293104;
Length = 39

Score = 37.0 bits (84), Expect = 0.22
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3

Query: 166 ETIENYCVWSGYW 128
ETIENYCVWSGYW
Sbjct: 21 ETIENYCVWSGYW 33

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 366,508,278
Number of extensions: 3640372
Number of successful extensions: 3339
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3326
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 1,061,185,681
Length adjustment: 117
Effective length of query: 39
Effective length of database: 678,777,265
Effective search space: 26472313335
Effective search space used: 26472313335
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.90 gvh: 0.37 alm: 0.60 top: 1.30 tms: 0.00 mit: 0.44 mip: 0.00
nuc: 0.44 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: nuclear
20.0 %: mitochondrial
16.0 %: cytoplasmic
8.0 %: plasma membrane
4.0 %: vesicles of secretory system

>> prediction for Contig-U04631-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0