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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04580-1
Contig ID Contig-U04580-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U04580-1 (Contig-U04580-1Q) /CSM_Contig/Contig-U04580-1Q.Seq.d
TTTTAATTTATTCAAGTTCAATTTTTTAAAAATATATATATATCCATATA
AAGATGTTAAAAAGTTTAAATTTTATAAATAGGAGTAACAGTATCTTCAT
TATCAAAAACTCGTAACTTCACATCACAAGTTAATAAAGAAACATGGGAT
AAATATGTTGCAAGCAATAAAAAACCAGTTGTTGTTGATTTCTTTGCTAC
ATGGTGTCCCCCTTGTAAACAACTTGAACCAGTATTAGTAAAAGCAGTAG
AAGATTATGGAAAATGTGATTTATATAAATATGACATATCTGAAGAAGAA
GGATTTCACGAAAAATTTGGAATTCAATCAATTCCACATGTTATTGGTTT
TCATAATAACAAAATAGTTTNCGAATTCAAAGGTGCCATTCCAGCATCCC
AAGTTAAAAAACATTTGGAAAAATTTGATGAACATTTAGGCGGAAAATAA
AAAACAAATTAAAAAAAAAAAAAATATATTAAATAAATAATTAAAAAAAA
AAAAAAAAAAAATTTGGATAATTCCTTTTTATCATTTTTTTTTTTTAATT
TATATTTATATTTATTTTTAAAAAATAATACTAATAATATTAATTAAAAT
TAACAGTTTTTGGTGGTTAATTTTTTAAAAAACAGATTTAAAAAAAAAAA
AAAACCACAAAAAAAATAAAAAAAAAATNTAATTGTTTAAAGATTAAAAA
AAAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 722
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 2672507
End point 2673184
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U04580
List of clone(s) 

est1=SSB596F,1,199
est2=SSD140Z,32,524
est3=SSB596Z,262,723
Translated Amino Acid sequence 
f*fiqvqffkniyisi*rc*kv*il*IGVTVSSLSKTRNFTSQVNKETWDKYVASNKKPV
VVDFFATWCPPCKQLEPVLVKAVEDYGKCDLYKYDISEEEGFHEKFGIQSIPHVIGFHNN
KIVXEFKGAIPASQVKKHLEKFDEHLGGK*ktn*kkkkyik*iikkkkkknldnsflsff
ffnlylylflknntnnin*n*qflvvnflknrfkkkkkpqkk*kknxiv*rlkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
f*fiqvqffkniyisi*rc*kv*il*IGVTVSSLSKTRNFTSQVNKETWDKYVASNKKPV
VVDFFATWCPPCKQLEPVLVKAVEDYGKCDLYKYDISEEEGFHEKFGIQSIPHVIGFHNN
KIVXEFKGAIPASQVKKHLEKFDEHLGGK*ktn*kkkkyik*iikkkkkknldnsflsff
ffnlylylflknntnnin*n*qflvvnflknrfkkkkkpqkk*kknxiv*rlkkkkkkkk


Frame B:
fnlfkfnflkiyiypykdvkkfkfyk*e*qylhyqklvtshhklikkhginmlqaiknql
llisllhgvplvnnlnqy**kq*kimenviyinmtylkkkdftknlefnqfhmllvfiit
k*fxnskvpfqhpklkniwknlmni*aenkkqikkkknilnk*lkkkkkkiwiipfyhff
fliyiyiyf*kiiliilikinsfwwlif*ktdlkkkknhkknkkkx*lfkd*kkkkkkkk


Frame C:
liysssif*kyiyihikmlkslnfinrsnsifiikns*lhits**rnmg*icckq*ktsc
c*flcymvspl*tt*tsiskssrrlwkm*fi*i*hi*rrrisrkiwnsinstcywfs**q
nsxriqrchssips*ktfgki**tfrrkiknklkkkkiy*inn*kkkkkkfg*flfiiff
f*fifififkk*y**y*lkltvfgg*ffkkqi*kkkkttkkikkkxnclkikkkkkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04580-1 (Contig-U04580-1Q)
/CSM_Contig/Contig-U04580-1Q.Seq.d
         (722 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04580-1 (Contig-U04580-1Q) /CSM_Contig/Conti...   801  0.0
Contig-U09903-1 (Contig-U09903-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U13836-1 (Contig-U13836-1Q) /CSM_Contig/Conti...    36  0.051
Contig-U04813-1 (Contig-U04813-1Q) /CSM_Contig/Conti...    36  0.051
Contig-U03221-1 (Contig-U03221-1Q) /CSM_Contig/Conti...    36  0.051
Contig-U12262-1 (Contig-U12262-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U11546-1 (Contig-U11546-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U11534-1 (Contig-U11534-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U09872-1 (Contig-U09872-1Q) /CSM_Contig/Conti...    34  0.20

>Contig-U04580-1 (Contig-U04580-1Q) /CSM_Contig/Contig-U04580-1Q.Seq.d
          Length = 722

 Score =  801 bits (404), Expect = 0.0
 Identities = 431/443 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttaatttattcaagttcaattttttaaaannnnnnnnnnnnccatataaagatgttaa 60
           |||||||||||||||||||||||||||||||            |||||||||||||||||
Sbjct: 1   ttttaatttattcaagttcaattttttaaaaatatatatatatccatataaagatgttaa 60

                                                                       
Query: 61  aaagtttaaattttataaataggagtaacagtatcttcattatcaaaaactcgtaacttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaagtttaaattttataaataggagtaacagtatcttcattatcaaaaactcgtaacttc 120

                                                                       
Query: 121 acatcacaagttaataaagaaacatgggataaatatgttgcaagcaataaaaaaccagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acatcacaagttaataaagaaacatgggataaatatgttgcaagcaataaaaaaccagtt 180

                                                                       
Query: 181 gttgttgatttctttgctacatggtgtcccccttgtaaacaacttgaaccagtattagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttgttgatttctttgctacatggtgtcccccttgtaaacaacttgaaccagtattagta 240

                                                                       
Query: 241 aaagcagtagaagattatggaaaatgtgatttatataaatatgacatatctgaagaagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagcagtagaagattatggaaaatgtgatttatataaatatgacatatctgaagaagaa 300

                                                                       
Query: 301 ggatttcacgaaaaatttggaattcaatcaattccacatgttattggttttcataataac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggatttcacgaaaaatttggaattcaatcaattccacatgttattggttttcataataac 360

                                                                       
Query: 361 aaaatagtttncgaattcaaaggtgccattccagcatcccaagttaaaaaacatttggaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaatagtttncgaattcaaaggtgccattccagcatcccaagttaaaaaacatttggaa 420

                                  
Query: 421 aaatttgatgaacatttaggcgg 443
           |||||||||||||||||||||||
Sbjct: 421 aaatttgatgaacatttaggcgg 443


 Score = 48.1 bits (24), Expect = 1e-05
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 603 acagtttttggtggttaatttttt 626
           ||||||||||||||||||||||||
Sbjct: 603 acagtttttggtggttaatttttt 626


 Score = 32.2 bits (16), Expect = 0.79
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 680 taattgtttaaagatt 695
           ||||||||||||||||
Sbjct: 680 taattgtttaaagatt 695


>Contig-U09903-1 (Contig-U09903-1Q) /CSM_Contig/Contig-U09903-1Q.Seq.d
          Length = 1863

 Score = 38.2 bits (19), Expect = 0.013
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 178  gttgttgttgatttctttg 196
            |||||||||||||||||||
Sbjct: 1709 gttgttgttgatttctttg 1691


>Contig-U13836-1 (Contig-U13836-1Q) /CSM_Contig/Contig-U13836-1Q.Seq.d
          Length = 1740

 Score = 36.2 bits (18), Expect = 0.051
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 326  aatcaattccacatgtta 343
            ||||||||||||||||||
Sbjct: 1412 aatcaattccacatgtta 1429


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9452
Number of Sequences: 6905
Number of extensions: 9452
Number of successful extensions: 997
Number of sequences better than 10.0: 83
length of query: 722
length of database: 5,674,871
effective HSP length: 16
effective length of query: 706
effective length of database: 5,564,391
effective search space: 3928460046
effective search space used: 3928460046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.25
Homology vs DNA 
Query= Contig-U04580-1 (Contig-U04580-1Q) /CSM_Contig/Contig-U04580-1Q.Seq.d
         (722 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C92140) Dictyostelium discoideum slug cDNA, clone SSD140.        620   e-173  1
(AU037197) Dictyostelium discoideum slug cDNA, clone SSB596.      266   7e-67  2
(AU071468) Dictyostelium discoideum slug cDNA, clone SSB596.      214   1e-56  2
(CO852395) LM_SH5_003157 Locusta migratoria solitarious phas...    52   0.030  1
(CO840835) LM_GL5_003045 Locusta migratoria gregarious phase...    52   0.030  1
(CO835405) LM_GH5_003344 Locusta migratoria gregarious phase...    52   0.030  1
(CO835404) LM_GH5_003343 Locusta migratoria gregarious phase...    52   0.030  1
(CO835403) LM_GH5_003342 Locusta migratoria gregarious phase...    52   0.030  1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    52   0.030  1
(AT002404) Entamoeba histolytica cDNA clone:En025.                 50   0.12   1
(CV219285) EST878995 non-normalized T1 cDNA library Trichomo...    50   0.12   1
(CV219284) EST878994 non-normalized T1 cDNA library Trichomo...    50   0.12   1
(CV212467) EST872177 non-normalized T1 cDNA library Trichomo...    50   0.12   1
(CV212466) EST872176 non-normalized T1 cDNA library Trichomo...    50   0.12   1
(GE731265) CBUH1622.b1 B.anynana_wing.LCPP_2-10kb Bicyclus a...    50   0.12   1
(FF684423) RH_MEa0013bB08 RH_MEa blackberry emerging leaf Ru...    50   0.12   1
(DY899617) SF9L06631 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY899045) SF9L05786 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY898680) SF9L04291 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY897591) SF9L02632 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY897525) SF9L02534 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY897417) SF9L02357 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY897126) SF9L01904 Spodoptera frugiperda cDNA Cell Line Li...    48   0.47   1
(DY790060) Sf1M07175-3-1 Spodoptera frugiperda Midgut cDNA L...    48   0.47   1
(DY790015) Sf1M07079-5-1 Spodoptera frugiperda Midgut cDNA L...    48   0.47   1
(DY789333) Sf1M05596-3-1 Spodoptera frugiperda Midgut cDNA L...    48   0.47   1
(DY788944) Sf1M04721-5-1 Spodoptera frugiperda Midgut cDNA L...    48   0.47   1
(DK969189) Papilio xuthus mRNA, clone: PxutEST_ftf11d05, 3' ...    48   0.47   1
(DK969188) Papilio xuthus mRNA, clone: PxutEST_ftf11d05, 5' ...    48   0.47   1
(CP000393) Trichodesmium erythraeum IMS101, complete genome.       48   0.47   1
(AC063932) Homo sapiens 3 BAC RP11-298A18 (Roswell Park Canc...    42   0.85   3
(DE849190) Macropus eugenii DNA, BAC clone: MEB1-011L06_R, 3...    46   1.9    1
(EH114732) E07_RPL_P22 Fifth instar salivary gland cDNA libr...    46   1.9    1
(EC826133) SME00002210 esmbsro2 Sawyeria marylandensis cDNA,...    46   1.9    1
(EC821271) SME00008886 esmbsro2 Sawyeria marylandensis cDNA,...    46   1.9    1
(EC820263) SME00009343 esmbsro2 Sawyeria marylandensis cDNA,...    46   1.9    1
(EB084366) 2.40 Midgut subtracted library in response to bac...    46   1.9    1
(GE684441) CBUA8122.b1 B.anynana_head_nosize Bicyclus anynan...    46   1.9    1
(FD779287) NADG-aaa01e12.g1 Rhodnius_prolixus_EST_NADG_Bacte...    46   1.9    1
(FD779229) NADG-aaa13e09.g1 Rhodnius_prolixus_EST_NADG_Bacte...    46   1.9    1
(FD778983) NADG-aaa13e09.b1 Rhodnius_prolixus_EST_NADG_Bacte...    46   1.9    1
(FD482290) NADI-aaa29b11.g1 Rhodnius_prolixus_EST_NADI_5th_i...    46   1.9    1
(FD481836) NADI-aaa32c09.b1 Rhodnius_prolixus_EST_NADI_5th_i...    46   1.9    1
(FD481321) NADI-aaa29b11.b1 Rhodnius_prolixus_EST_NADI_5th_i...    46   1.9    1
(FD481144) NADI-aaa32c09.g1 Rhodnius_prolixus_EST_NADI_5th_i...    46   1.9    1
(EX684459) JS7BE91JG Salt and heat stressed Fragaria vesca (...    46   1.9    1
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    46   1.9    1
(AC176792) Strongylocentrotus purpuratus clone R3-3106M23, W...    36   2.4    4
(EJ179797) 1092344115371 Global-Ocean-Sampling_GS-27-01-01-1...    36   4.7    2
(AC078805) Homo sapiens 3 BAC RP11-402E20 (Roswell Park Canc...    44   7.3    1
(AQ753723) HS_2137_B1_D01_MR CIT Approved Human Genomic Sper...    44   7.3    1
(AQ023988) CpGR0327A Cryptosporidium parvum genomic random l...    44   7.3    1
(AQ003781) CpG0390B CpIOWAgDNA1 Cryptosporidium parvum genom...    44   7.3    1
(AM648950) Entamoeba moshkovskii FIC GSS, clone mosh063e09.p1k.    44   7.3    1
(EL834917) CBWN15684.g1 NICHD_XGC_tropTe1 Xenopus (Silurana)...    44   7.3    1
(DR923151) EST1114690 Aquilegia cDNA library Aquilegia formo...    44   7.3    1
(DR923150) EST1114689 Aquilegia cDNA library Aquilegia formo...    44   7.3    1
(DR873154) JGI_CABG12638.rev NIH_XGC_tropSto1 Xenopus (Silur...    44   7.3    1
(CX963108) JGI_CAAO12301.fwd NIH_XGC_tropTe5 Xenopus (Silura...    44   7.3    1
(CX963107) JGI_CAAO12301.rev NIH_XGC_tropTe5 Xenopus (Silura...    44   7.3    1
(CX932114) JGI_CAAO2149.rev NIH_XGC_tropTe5 Xenopus (Siluran...    44   7.3    1
(CX905107) JGI_CAAM15206.fwd NIH_XGC_tropTe3 Xenopus (Silura...    44   7.3    1
(CX905106) JGI_CAAM15206.rev NIH_XGC_tropTe3 Xenopus (Silura...    44   7.3    1
(CX888904) JGI_CAAM2328.rev NIH_XGC_tropTe3 Xenopus (Siluran...    44   7.3    1
(CX804862) JGI_CAAJ16884.rev NIH_XGC_tropBrn2 Xenopus (Silur...    44   7.3    1
(CX321127) JGI_XZT12645.fwd NIH_XGC_tropTad5 Xenopus (Silura...    44   7.3    1
(AM043494) Schistosoma mansoni lung schistosomulum EST, clon...    44   7.3    1
(CN478005) rx44h08.y1.gz Meloidogyne paranaensis egg SL1 pGE...    44   7.3    1
(CN477959) rx44c09.y1.gz Meloidogyne paranaensis egg SL1 pGE...    44   7.3    1
(CK241834) rx34c02.y1 Meloidogyne paranaensis egg SL1 pGEM M...    44   7.3    1
(CK241154) rx25h08.y1 Meloidogyne paranaensis egg SL1 pGEM M...    44   7.3    1
(AI977193) EST271787 Schistosoma mansoni male, Phil LoVerde/...    44   7.3    1
(CD191689) MS1-0073T-L306-G09-U.B MS1-0073 Schistosoma manso...    44   7.3    1
(CD188708) MS1-0063U-A261-H03-U.B MS1-0063 Schistosoma manso...    44   7.3    1
(CD188512) MS1-0063U-A243-F10-U.B MS1-0063 Schistosoma manso...    44   7.3    1
(CD132749) MG1-0024U-A217-D01-U.B MG1-0024 Schistosoma manso...    44   7.3    1
(H95404) yw60b08.r1 Soares_placenta_8to9weeks_2NbHP8to9W Hom...    44   7.3    1
(AW871695) ra80h10.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(AW870759) ra50c01.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(AW829884) ra47a04.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(AW828508) ra62f04.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(AW827983) ra60c05.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(FF505605) G709P51FH11.T0 Acorn worm normalized neurula pExp...    44   7.3    1
(AW783365) ra27h03.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(AW735701) ra29e11.y1 Bird-Rao Meloidogyne incognita J2 Melo...    44   7.3    1
(EX716912) SC_AW204651e09.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX716612) SC_AW204451g08.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX716489) SC_AW203551g06.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX716430) SC_AW203531g06.esd.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX716115) SB_AW219351e01.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX715520) SB_AW218451g05.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX715491) SB_AW218451c12.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX715074) SB_AW217851d12.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX714698) SB_AW217351b06.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX714606) SB_AW217152h04.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX714514) SB_AW217051f03.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX713899) SB_AW216031g10.esd.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX713817) SB_AW215931d11.esd.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX713655) SB_AW215731b12.ab1.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX713429) SB_AW215431b11.ab1.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX713026) NC_AW221151b02.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX709283) GF_AW200651a08.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX709205) GF_AW200551g09.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX709116) GF_AW200531d11.esd.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX709030) GF_AW200451c05.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX708963) GF_AW200431c05.esd.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX708043) FS_AW203051d09.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX707981) FS_AW203031d09.esd.y AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX707795) FS_AW202851e03.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX707572) FS_AW202651a03.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX707293) FS_AW202351e04.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX706161) FS_AW201451b03.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(EX706152) FS_AW201451a02.esd.z AW2 Schistosoma mansoni cDNA...    44   7.3    1
(ES678207) CCAX4368.g3 NICHD_XGC_tropEye1 Xenopus (Silurana)...    44   7.3    1
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co...    44   7.3    1
(AP006628) Onion yellows phytoplasma OY-M DNA, complete genome.    44   7.3    1
(AC151747) Ornithorhynchus anatinus chromosome UNK clone OAB...    42   8.9    2

>(C92140) Dictyostelium discoideum slug cDNA, clone SSD140.
          Length = 492

 Score =  620 bits (313), Expect = e-173
 Identities = 321/323 (99%)
 Strand = Plus / Plus


Query: 83  gagtaacagtatcttcattatcaaaaactcgtaacttcacatcacaagttaataaagaaa 142
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 51  gagtcacagtatcttcattatcaaaaactcgtaacttcacatcacaagttaataangaaa 110


Query: 143 catgggataaatatgttgcaagcaataaaaaaccagttgttgttgatttctttgctacat 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 catgggataaatatgttgcaagcaataaaaaaccagttgttgttgatttctttgctacat 170


Query: 203 ggtgtcccccttgtaaacaacttgaaccagtattagtaaaagcagtagaagattatggaa 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ggtgtcccccttgtaaacaacttgaaccagtattagtaaaagcagtagaagattatggaa 230


Query: 263 aatgtgatttatataaatatgacatatctgaagaagaaggatttcacgaaaaatttggaa 322
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aatgtgatttatataaatatgacatatctgaagaagaaggatttcacgaaaaatttggaa 290


Query: 323 ttcaatcaattccacatgttattggttttcataataacaaaatagtttncgaattcaaag 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttcaatcaattccacatgttattggttttcataataacaaaatagtttncgaattcaaag 350


Query: 383 gtgccattccagcatcccaagtt 405
           |||||||||||||||||||||||
Sbjct: 351 gtgccattccagcatcccaagtt 373

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 493,311,167
Number of extensions: 30838834
Number of successful extensions: 2388770
Number of sequences better than 10.0: 117
Length of query: 722
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 698
Effective length of database: 99,340,224,878
Effective search space: 69339476964844
Effective search space used: 69339476964844
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.30
Homology vs Protein 
Query= Contig-U04580-1 (Contig-U04580-1Q) /CSM_Contig/Contig-U04580-1Q.Seq.d
         (722 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000633_3114(CP000633|pid:none) Agrobacterium vitis S4 chromoso...    84   4e-15
CP001349_4982(CP001349|pid:none) Methylobacterium nodulans ORS 2...    84   6e-15
AL591688_3202(AL591688|pid:none) Sinorhizobium meliloti 1021 com...    83   8e-15
CP000943_4217(CP000943|pid:none) Methylobacterium sp. 4-46, comp...    83   8e-15
CP000927_4572(CP000927|pid:none) Caulobacter sp. K31, complete g...    83   1e-14
CP001622_4028(CP001622|pid:none) Rhizobium leguminosarum bv. tri...    83   1e-14
CP000759_527(CP000759|pid:none) Ochrobactrum anthropi ATCC 49188...    82   1e-14
BX572593_268(BX572593|pid:none) Rhodopseudomonas palustris CGA00...    82   1e-14
CP000738_3011(CP000738|pid:none) Sinorhizobium medicae WSM419, c...    82   1e-14
CU234118_305(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple...    82   1e-14
CP000873_852(CP000873|pid:none) Brucella canis ATCC 23365 chromo...    82   2e-14
BA000040_594(BA000040|pid:none) Bradyrhizobium japonicum USDA 11...    82   2e-14
CP000301_260(CP000301|pid:none) Rhodopseudomonas palustris BisB1...    81   3e-14
AE007870_688(AE007870|pid:none) Agrobacterium tumefaciens str. C...    81   4e-14
CP001489_784(CP001489|pid:none) Brucella melitensis ATCC 23457 c...    81   4e-14
AE014292_854(AE014292|pid:none) Brucella suis 1330 chromosome II...    81   4e-14
AM040265_343(AM040265|pid:none) Brucella melitensis biovar Abort...    81   4e-14
CP000133_3922(CP000133|pid:none) Rhizobium etli CFN 42, complete...    80   5e-14
AE005673_109(AE005673|pid:none) Caulobacter crescentus CB15, com...    80   6e-14
CP000463_408(CP000463|pid:none) Rhodopseudomonas palustris BisA5...    80   6e-14
(P07591) RecName: Full=Thioredoxin M-type, chloroplastic;       ...    80   8e-14
X51463_1(X51463|pid:none) Spinach mRNA for thioredoxin m (clone ...    80   8e-14
BT053967_1(BT053967|pid:none) Zea mays full-length cDNA clone ZM...    79   1e-13
AK099517_1(AK099517|pid:none) Oryza sativa Japonica Group cDNA c...    79   1e-13
CP000390_3239(CP000390|pid:none) Mesorhizobium sp. BNC1, complet...    79   1e-13
BA000012_3408(BA000012|pid:none) Mesorhizobium loti MAFF303099 D...    79   2e-13
CP000394_251(CP000394|pid:none) Granulibacter bethesdensis CGDNI...    79   2e-13
AM181176_5359(AM181176|pid:none) Pseudomonas fluorescens SBW25 c...    79   2e-13
AE015928_1456(AE015928|pid:none) Bacteroides thetaiotaomicron VP...    79   2e-13
CP000439_833(CP000439|pid:none) Francisella tularensis subsp. no...    78   2e-13
CP000250_295(CP000250|pid:none) Rhodopseudomonas palustris HaA2,...    78   3e-13
CP000352_2627(CP000352|pid:none) Ralstonia metallidurans CH34, c...    77   4e-13
BT053469_1(BT053469|pid:none) Medicago truncatula clone MTYFP_FQ...    77   4e-13
AX763726_1(AX763726|pid:none) Sequence 33 from Patent WO03040180...    77   4e-13
BT065894_1(BT065894|pid:none) Zea mays full-length cDNA clone ZM...    77   4e-13
CP000248_1986(CP000248|pid:none) Novosphingobium aromaticivorans...    77   5e-13
CP001196_340(CP001196|pid:none) Oligotropha carboxidovorans OM5 ...    77   5e-13
AY838902_1(AY838902|pid:none) Antrodia camphorata thioredoxin mR...    77   5e-13
CP000514_3294(CP000514|pid:none) Marinobacter aquaeolei VT8, com...    77   5e-13
BT051337_1(BT051337|pid:none) Medicago truncatula clone MTYF1_F2...    77   7e-13
AE017180_3261(AE017180|pid:none) Geobacter sulfurreducens PCA, c...    77   7e-13
EU952268_1(EU952268|pid:none) Zea mays clone 1273737 thioredoxin...    76   9e-13
CP000937_1762(CP000937|pid:none) Francisella philomiragia subsp....    76   9e-13
EU972958_1(EU972958|pid:none) Zea mays clone 390735 unknown mRNA.      76   9e-13
AL646052_1189(AL646052|pid:none) Ralstonia solanacearum GMI1000 ...    76   1e-12
CP000774_1309(CP000774|pid:none) Parvibaculum lavamentivorans DS...    76   1e-12
AP009044_3043(AP009044|pid:none) Corynebacterium glutamicum R DN...    75   2e-12
CP001052_3158(CP001052|pid:none) Burkholderia phytofirmans PsJN ...    75   2e-12
CP000148_3193(CP000148|pid:none) Geobacter metallireducens GS-15...    75   3e-12
CP000352_2127(CP000352|pid:none) Ralstonia metallidurans CH34, c...    75   3e-12
CP000449_2923(CP000449|pid:none) Maricaulis maris MCS10, complet...    75   3e-12
CP001337_646(CP001337|pid:none) Chloroflexus aggregans DSM 9485,...    75   3e-12
AY084496_1(AY084496|pid:none) Arabidopsis thaliana clone 10950 m...    74   4e-12
CP000958_2570(CP000958|pid:none) Burkholderia cenocepacia MC0-3 ...    74   4e-12
CP000458_2562(CP000458|pid:none) Burkholderia cenocepacia HI2424...    74   4e-12
AP008207_3754(AP008207|pid:none) Oryza sativa (japonica cultivar...    74   4e-12
CP000685_1337(CP000685|pid:none) Flavobacterium johnsoniae UW101...    74   4e-12
CP001390_1285(CP001390|pid:none) Geobacter sp. FRC-32, complete ...    74   4e-12
CP001628_2227(CP001628|pid:none) Micrococcus luteus NCTC 2665, c...    74   4e-12
AP003263_29(AP003263|pid:none) Oryza sativa Japonica Group genom...    74   4e-12
CP000378_1942(CP000378|pid:none) Burkholderia cenocepacia AU 105...    74   4e-12
CP000124_2346(CP000124|pid:none) Burkholderia pseudomallei 1710b...    74   4e-12
CP000697_2097(CP000697|pid:none) Acidiphilium cryptum JF-5, comp...    74   4e-12
CP001025_2460(CP001025|pid:none) Burkholderia ambifaria MC40-6 c...    74   5e-12
CP000440_2604(CP000440|pid:none) Burkholderia ambifaria AMMD chr...    74   5e-12
AE001437_3036(AE001437|pid:none) Clostridium acetobutylicum ATCC...    74   5e-12
CP000151_2709(CP000151|pid:none) Burkholderia sp. 383 chromosome...    74   5e-12
CP000908_2217(CP000908|pid:none) Methylobacterium extorquens PA1...    74   6e-12
BA000021_304(BA000021|pid:none) Wigglesworthia glossinidia endos...    74   6e-12
CP000915_779(CP000915|pid:none) Francisella tularensis subsp. me...    74   6e-12
CP001298_2398(CP001298|pid:none) Methylobacterium chloromethanic...    74   6e-12
(P10472) RecName: Full=Thioredoxin;          Short=Trx;                74   6e-12
CP001150_2881(CP001150|pid:none) Rhodobacter sphaeroides KD131 c...    74   6e-12
CP000673_2331(CP000673|pid:none) Clostridium kluyveri DSM 555, c...    74   6e-12
AL646052_779(AL646052|pid:none) Ralstonia solanacearum GMI1000 c...    74   6e-12
AP009049_2100(AP009049|pid:none) Clostridium kluyveri NBRC 12016...    74   6e-12
CP000143_62(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 chr...    74   6e-12
CP000158_3484(CP000158|pid:none) Hyphomonas neptunium ATCC 15444...    74   6e-12
CP001620_2007(CP001620|pid:none) Corynebacterium kroppenstedtii ...    74   6e-12
CU695238_15(CU695238|pid:none) Ralstonia solanacearum strain Mol...    74   6e-12
CP000607_967(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2...    73   8e-12
CP000526_651(CP000526|pid:none) Burkholderia mallei SAVP1 chromo...    73   8e-12
CU459003_2720(CU459003|pid:none) Magnetospirillum gryphiswaldens...    73   8e-12
CP000124_1052(CP000124|pid:none) Burkholderia pseudomallei 1710b...    73   8e-12
BX571965_865(BX571965|pid:none) Burkholderia pseudomallei strain...    73   8e-12
CP000086_2179(CP000086|pid:none) Burkholderia thailandensis E264...    73   8e-12
CP000820_1035(CP000820|pid:none) Frankia sp. EAN1pec, complete g...    73   8e-12
AF095750_1(AF095750|pid:none) Arabidopsis thaliana thioredoxin m...    73   8e-12
CP000570_899(CP000570|pid:none) Burkholderia pseudomallei 668 ch...    73   8e-12
CP001503_2782(CP001503|pid:none) Burkholderia glumae BGR1 chromo...    73   1e-11
CP000661_2868(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17...    73   1e-11
CP001504_1420(CP001504|pid:none) Burkholderia glumae BGR1 chromo...    73   1e-11
CP000386_988(CP000386|pid:none) Rubrobacter xylanophilus DSM 994...    73   1e-11
AE008922_2575(AE008922|pid:none) Xanthomonas campestris pv. camp...    73   1e-11
CP001504_967(CP001504|pid:none) Burkholderia glumae BGR1 chromos...    72   1e-11
DQ911523_1(DQ911523|pid:none) Flavobacterium columnare strain AL...    72   1e-11
BA000030_4313(BA000030|pid:none) Streptomyces avermitilis MA-468...    72   1e-11
CP000680_3833(CP000680|pid:none) Pseudomonas mendocina ymp, comp...    72   1e-11
CP001097_785(CP001097|pid:none) Chlorobium limicola DSM 245, com...    72   1e-11
CP001124_400(CP001124|pid:none) Geobacter bemidjiensis Bem, comp...    72   1e-11
BA000037_3182(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch...    72   2e-11
AE016795_890(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso...    72   2e-11
EF148317_1(EF148317|pid:none) Populus trichocarpa x Populus delt...    72   2e-11
AE016853_669(AE016853|pid:none) Pseudomonas syringae pv. tomato ...    72   2e-11
CP000377_54(CP000377|pid:none) Silicibacter sp. TM1040, complete...    72   2e-11
CP000607_997(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2...    72   2e-11
CP000249_3640(CP000249|pid:none) Frankia sp. CcI3, complete geno...    72   2e-11
CT573072_936(CT573072|pid:none) Kuenenia stuttgartiensis genome ...    72   2e-11
CP000246_713(CP000246|pid:none) Clostridium perfringens ATCC 131...    72   2e-11
CP000542_1513(CP000542|pid:none) Verminephrobacter eiseniae EF01...    72   2e-11
AE008923_2736(AE008923|pid:none) Xanthomonas axonopodis pv. citr...    72   2e-11
EU056813_1(EU056813|pid:none) Limonium bicolor thioredoxin mRNA,...    71   3e-11
CP000431_1435(CP000431|pid:none) Rhodococcus jostii RHA1, comple...    71   3e-11
CP000432_1063(CP000432|pid:none) Rhodococcus jostii RHA1 plasmid...    71   3e-11
AE006470_1198(AE006470|pid:none) Chlorobium tepidum TLS, complet...    71   3e-11
CP000698_361(CP000698|pid:none) Geobacter uraniireducens Rf4, co...    71   3e-11
CP001080_1484(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP...    71   3e-11
CP000304_818(CP000304|pid:none) Pseudomonas stutzeri A1501, comp...    71   3e-11
CT573326_530(CT573326|pid:none) Pseudomonas entomophila str. L48...    71   3e-11
CP001287_544(CP001287|pid:none) Cyanothece sp. PCC 8801, complet...    71   4e-11
CP000744_1031(CP000744|pid:none) Pseudomonas aeruginosa PA7, com...    71   4e-11
CP001322_2389(CP001322|pid:none) Desulfatibacillum alkenivorans ...    71   4e-11
CP000140_1864(CP000140|pid:none) Parabacteroides distasonis ATCC...    71   4e-11
CP000448_438(CP000448|pid:none) Syntrophomonas wolfei subsp. wol...    71   4e-11
CU861906_784(CU861906|pid:none) Ralstonia solanacearum strain Mo...    71   4e-11
AF187159_2(AF187159|pid:none) Streptomyces coelicolor TrxB (trxB...    71   4e-11
CP001189_2207(CP001189|pid:none) Gluconacetobacter diazotrophicu...    71   4e-11
CP000613_2442(CP000613|pid:none) Rhodospirillum centenum SW, com...    71   4e-11
AE004091_4060(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co...    71   4e-11
CP001108_1162(CP001108|pid:none) Prosthecochloris aestuarii DSM ...    71   4e-11
AM889285_184(AM889285|pid:none) Gluconacetobacter diazotrophicus...    71   4e-11
CP000155_1204(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    70   5e-11
CP000926_551(CP000926|pid:none) Pseudomonas putida GB-1, complet...    70   5e-11
CP000009_737(CP000009|pid:none) Gluconobacter oxydans 621H, comp...    70   5e-11
CP000804_3247(CP000804|pid:none) Roseiflexus castenholzii DSM 13...    70   5e-11
CP000960_98(CP000960|pid:none) Burkholderia cenocepacia MC0-3 ch...    70   7e-11
CP000853_643(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ...    70   7e-11
CP000828_5313(CP000828|pid:none) Acaryochloris marina MBIC11017,...    70   7e-11
CP000267_194(CP000267|pid:none) Rhodoferax ferrireducens T118, c...    70   7e-11
AP009493_2118(AP009493|pid:none) Streptomyces griseus subsp. gri...    70   7e-11
BX248361_44(BX248361|pid:none) Corynebacterium diphtheriae gravi...    70   7e-11
CP001644_784(CP001644|pid:none) Ralstonia pickettii 12D chromoso...    70   9e-11
CP000270_2070(CP000270|pid:none) Burkholderia xenovorans LB400 c...    70   9e-11
(Q8KE49) RecName: Full=Thioredoxin-2;          Short=Trx-2;  &AE...    70   9e-11
CP001111_2908(CP001111|pid:none) Stenotrophomonas maltophilia R5...    70   9e-11
AE000657_1324(AE000657|pid:none) Aquifex aeolicus VF5, complete ...    70   9e-11
CP000949_562(CP000949|pid:none) Pseudomonas putida W619, complet...    70   9e-11
CP000680_307(CP000680|pid:none) Pseudomonas mendocina ymp, compl...    70   9e-11
CP000713_2289(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl...    70   9e-11
CP000453_314(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1...    70   9e-11
AP009152_2347(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ...    69   1e-10
CP000319_80(CP000319|pid:none) Nitrobacter hamburgensis X14, com...    69   1e-10
CP000076_5443(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c...    69   1e-10
CP001230_1222(CP001230|pid:none) Persephonella marina EX-H1, com...    69   1e-10
AE015451_504(AE015451|pid:none) Pseudomonas putida KT2440 comple...    69   1e-10
CP000712_536(CP000712|pid:none) Pseudomonas putida F1, complete ...    69   1e-10
CP000094_5018(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ...    69   1e-10
CP001013_2794(CP001013|pid:none) Leptothrix cholodnii SP-6, comp...    69   1e-10
CP000264_4067(CP000264|pid:none) Jannaschia sp. CCS1, complete g...    69   1e-10
CP000512_4480(CP000512|pid:none) Acidovorax citrulli AAC00-1, co...    69   1e-10
CP001348_2165(CP001348|pid:none) Clostridium cellulolyticum H10,...    69   1e-10
AM999887_701(AM999887|pid:none) Wolbachia endosymbiont of Culex ...    69   1e-10
CP001344_150(CP001344|pid:none) Cyanothece sp. PCC 7425, complet...    69   1e-10
AF095752_1(AF095752|pid:none) Arabidopsis thaliana thioredoxin m...    69   1e-10
AE017285_1831(AE017285|pid:none) Desulfovibrio vulgaris subsp. v...    69   1e-10
AM260479_2722(AM260479|pid:none) Ralstonia eutropha H16 chromoso...    69   1e-10
AE003852_302(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ...    69   1e-10
AK227059_1(AK227059|pid:none) Arabidopsis thaliana mRNA for thio...    69   1e-10
CP001472_221(CP001472|pid:none) Acidobacterium capsulatum ATCC 5...    69   1e-10
L35043_32(L35043|pid:none) Mycoplasma gallisepticum strain A5969...    69   1e-10
CP000923_1401(CP000923|pid:none) Thermoanaerobacter sp. X514, co...    69   1e-10
BX294154_192(BX294154|pid:none) Rhodopirellula baltica SH 1 comp...    69   1e-10
AP009153_1250(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN...    69   1e-10
CP000806_2387(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...    69   1e-10
FM178379_147(FM178379|pid:none) Aliivibrio salmonicida LFI1238 c...    69   2e-10
CP000108_1133(CP000108|pid:none) Chlorobium chlorochromatii CaD3...    69   2e-10
CR380957_28(CR380957|pid:none) Candida glabrata strain CBS138 ch...    69   2e-10
BA000030_2836(BA000030|pid:none) Streptomyces avermitilis MA-468...    69   2e-10
AE015450_633(AE015450|pid:none) Mycoplasma gallisepticum strain ...    69   2e-10
CP001029_4856(CP001029|pid:none) Methylobacterium populi BJ001, ...    69   2e-10
CP000850_3842(CP000850|pid:none) Salinispora arenicola CNS-205, ...    69   2e-10
CP000113_2585(CP000113|pid:none) Myxococcus xanthus DK 1622, com...    69   2e-10
CP001618_366(CP001618|pid:none) Beutenbergia cavernae DSM 12333,...    69   2e-10
AM942759_3283(AM942759|pid:none) Proteus mirabilis strain HI4320...    69   2e-10
CP000009_604(CP000009|pid:none) Gluconobacter oxydans 621H, comp...    69   2e-10
CR378674_138(CR378674|pid:none) Photobacterium profundum SS9; se...    69   2e-10
CP000908_4381(CP000908|pid:none) Methylobacterium extorquens PA1...    69   2e-10
B55124(B55124;A27801)thioredoxin - Chlorobium limicola f.sp. thi...    69   2e-10
AL939123_197(AL939123|pid:none) Streptomyces coelicolor A3(2) co...    69   2e-10
CP001298_4701(CP001298|pid:none) Methylobacterium chloromethanic...    69   2e-10
CP000568_356(CP000568|pid:none) Clostridium thermocellum ATCC 27...    69   2e-10
CU207366_2979(CU207366|pid:none) Gramella forsetii KT0803 comple...    69   2e-10
BA000031_3001(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22...    69   2e-10
BA000016_739(BA000016|pid:none) Clostridium perfringens str. 13 ...    68   3e-10
CP001358_1183(CP001358|pid:none) Desulfovibrio desulfuricans sub...    68   3e-10
CP001099_852(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ...    68   3e-10
AE000782_1267(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304...    68   3e-10
CP000804_3998(CP000804|pid:none) Roseiflexus castenholzii DSM 13...    68   3e-10
CP000440_1968(CP000440|pid:none) Burkholderia ambifaria AMMD chr...    68   3e-10
CP001101_1404(CP001101|pid:none) Chlorobium phaeobacteroides BS1...    68   3e-10
L35043_18(L35043|pid:none) Mycoplasma gallisepticum strain A5969...    68   3e-10
CP000821_4101(CP000821|pid:none) Shewanella sediminis HAW-EB3, c...    68   3e-10
CP000828_4723(CP000828|pid:none) Acaryochloris marina MBIC11017,...    68   3e-10
CP000830_3423(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ...    68   3e-10
CP000934_1406(CP000934|pid:none) Cellvibrio japonicus Ueda107, c...    68   3e-10
CP000377_2846(CP000377|pid:none) Silicibacter sp. TM1040, comple...    68   3e-10
CP001107_1168(CP001107|pid:none) Eubacterium rectale ATCC 33656,...    68   3e-10
CP000750_4471(CP000750|pid:none) Kineococcus radiotolerans SRS30...    68   3e-10
FJ634736_1(FJ634736|pid:none) Synthetic construct Drosophila mel...    68   3e-10
AJ316577_1(AJ316577|pid:none) Pisum sativum chloroplast mRNA for...    68   3e-10
CP000089_2968(CP000089|pid:none) Dechloromonas aromatica RCB, co...    68   3e-10
CP001102_608(CP001102|pid:none) Candidatus Amoebophilus asiaticu...    68   3e-10
DQ311424_1(DQ311424|pid:none) Bombyx mori mitochondrial thioredo...    68   3e-10
AB478083_1(AB478083|pid:none) Pichia pastoris TRX2 gene for thio...    68   3e-10
CP000746_1814(CP000746|pid:none) Actinobacillus succinogenes 130...    68   3e-10
AM467187_2(AM467187|pid:none) Vitis vinifera contig VV78X176831....    67   4e-10
BX548174_1227(BX548174|pid:none) Prochlorococcus marinus MED4 co...    67   4e-10
CP000117_187(CP000117|pid:none) Anabaena variabilis ATCC 29413, ...    67   4e-10
CP001110_1435(CP001110|pid:none) Pelodictyon phaeoclathratiforme...    67   4e-10
CP001131_3566(CP001131|pid:none) Anaeromyxobacter sp. K, complet...    67   4e-10
CP001016_2137(CP001016|pid:none) Beijerinckia indica subsp. indi...    67   4e-10
AJ605859_1(AJ605859|pid:none) Mesobuthus gibbosus partial trxt g...    67   4e-10
AJ605810_1(AJ605810|pid:none) Mesobuthus cyprius partial trxt ge...    67   4e-10
(Q9ZP20) RecName: Full=Thioredoxin M-type, chloroplastic;       ...    67   4e-10
CP000668_3413(CP000668|pid:none) Yersinia pestis Pestoides F, co...    67   4e-10
CP001020_1896(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co...    67   4e-10
AJ605817_1(AJ605817|pid:none) Mesobuthus gibbosus partial trxt g...    67   4e-10
AM286415_161(AM286415|pid:none) Yersinia enterocolitica subsp. e...    67   4e-10
CP001601_2523(CP001601|pid:none) Corynebacterium aurimucosum ATC...    67   4e-10
AJ605847_1(AJ605847|pid:none) Mesobuthus gibbosus partial trxt g...    67   4e-10
AJ605827_1(AJ605827|pid:none) Mesobuthus gibbosus partial trxt g...    67   4e-10
CP001635_5033(CP001635|pid:none) Variovorax paradoxus S110 chrom...    67   4e-10
CP000789_298(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 chr...    67   4e-10
(Q4L5F0) RecName: Full=Thioredoxin;          Short=Trx;  &AP0067...    67   4e-10
CP000058_4315(CP000058|pid:none) Pseudomonas syringae pv. phaseo...    67   4e-10
CP000552_1150(CP000552|pid:none) Prochlorococcus marinus str. MI...    67   6e-10
CP000393_2507(CP000393|pid:none) Trichodesmium erythraeum IMS101...    67   6e-10
CU459141_2971(CU459141|pid:none) Acinetobacter baumannii str. AY...    67   6e-10
CU468230_2774(CU468230|pid:none) Acinetobacter baumannii str. SD...    67   6e-10
(P37395) RecName: Full=Thioredoxin;          Short=Trx;  &AF0221...    67   6e-10
CU458896_4906(CU458896|pid:none) Mycobacterium abscessus chromos...    67   6e-10
CP001083_3575(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    67   6e-10
AM295250_758(AM295250|pid:none) Staphylococcus carnosus subsp. c...    67   6e-10
AY376435_1(AY376435|pid:none) Paracoccidioides brasiliensis thio...    67   6e-10
AP006841_711(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ...    67   6e-10
AE009951_686(AE009951|pid:none) Fusobacterium nucleatum subsp. n...    67   6e-10
CP000142_3276(CP000142|pid:none) Pelobacter carbinolicus DSM 238...    67   6e-10
EF148248_1(EF148248|pid:none) Populus trichocarpa x Populus delt...    67   6e-10
CP000112_2063(CP000112|pid:none) Desulfovibrio desulfuricans G20...    67   6e-10
CP001100_1898(CP001100|pid:none) Chloroherpeton thalassium ATCC ...    67   7e-10
CP000386_2244(CP000386|pid:none) Rubrobacter xylanophilus DSM 99...    67   7e-10
CP000057_83(CP000057|pid:none) Haemophilus influenzae 86-028NP, ...    67   7e-10
CP000555_1283(CP000555|pid:none) Methylibium petroleiphilum PM1,...    67   7e-10
CP000238_167(CP000238|pid:none) Baumannia cicadellinicola str. H...    67   7e-10
CU466930_780(CU466930|pid:none) Candidatus Cloacamonas acidamino...    67   7e-10
AM902716_1980(AM902716|pid:none) Bordetella petrii strain DSM 12...    67   7e-10
EF146784_1(EF146784|pid:none) Populus trichocarpa clone WS01213_...    67   7e-10
FM954972_2873(FM954972|pid:none) Vibrio splendidus LGP32 chromos...    67   7e-10
AE008692_1097(AE008692|pid:none) Zymomonas mobilis subsp. mobili...    67   7e-10
CP000232_903(CP000232|pid:none) Moorella thermoacetica ATCC 3907...    67   7e-10
AJ605819_1(AJ605819|pid:none) Mesobuthus gibbosus partial trxt g...    67   7e-10
CP000671_504(CP000671|pid:none) Haemophilus influenzae PittEE, c...    67   7e-10
(P52231) RecName: Full=Thioredoxin;          Short=Trx;  &BA0000...    66   1e-09
AE003849_2160(AE003849|pid:none) Xylella fastidiosa 9a5c, comple...    66   1e-09
CP000323_2285(CP000323|pid:none) Psychrobacter cryohalolentis K5...    66   1e-09
AB032759_1(AB032759|pid:none) Actinobacillus actinomycetemcomita...    66   1e-09
EU016632_9(EU016632|pid:none) Uncultured Group I marine crenarch...    66   1e-09
CP000447_459(CP000447|pid:none) Shewanella frigidimarina NCIMB 4...    66   1e-09
CP000082_1989(CP000082|pid:none) Psychrobacter arcticus 273-4, c...    66   1e-09
(P43785) RecName: Full=Thioredoxin;          Short=Trx;  &E64047...    66   1e-09
AM420293_7186(AM420293|pid:none) Saccharopolyspora erythraea NRR...    66   1e-09
AM412317_3440(AM412317|pid:none) Clostridium botulinum A str. AT...    66   1e-09
CP000362_37(CP000362|pid:none) Roseobacter denitrificans OCh 114...    66   1e-09
AY619685_18(AY619685|pid:none) Uncultured gamma proteobacterium ...    66   1e-09
(Q05739) RecName: Full=Thioredoxin;          Short=Trx;  &B53307...    66   1e-09
CP000875_4387(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ...    66   1e-09
CP001287_1092(CP001287|pid:none) Cyanothece sp. PCC 8801, comple...    66   1e-09
CP000830_35(CP000830|pid:none) Dinoroseobacter shibae DFL 12, co...    66   1e-09
CP001197_397(CP001197|pid:none) Desulfovibrio vulgaris str. 'Miy...    66   1e-09
BA000016_2355(BA000016|pid:none) Clostridium perfringens str. 13...    66   1e-09
CP000285_3014(CP000285|pid:none) Chromohalobacter salexigens DSM...    66   1e-09
CP001001_3329(CP001001|pid:none) Methylobacterium radiotolerans ...    66   1e-09
CP000386_1808(CP000386|pid:none) Rubrobacter xylanophilus DSM 99...    66   1e-09
CP000251_3496(CP000251|pid:none) Anaeromyxobacter dehalogenans 2...    65   2e-09
CP001097_1054(CP001097|pid:none) Chlorobium limicola DSM 245, co...    65   2e-09
AB034941_8(AB034941|pid:none) Staphylococcus warneri nukM, nukA,...    65   2e-09
CS008397_1(CS008397|pid:none) Sequence 23 from Patent WO20050071...    65   2e-09
CP001359_3631(CP001359|pid:none) Anaeromyxobacter dehalogenans 2...    65   2e-09
CP001106_56(CP001106|pid:none) Eubacterium eligens ATCC 27750 pl...    65   2e-09
(P0AA25) RecName: Full=Thioredoxin-1;          Short=Trx-1;  &(P...    65   2e-09
CP000822_118(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,...    65   2e-09
U16857_2(U16857|pid:none) Fusion cloning vector pTRXFUS, complet...    65   2e-09
CP000127_2482(CP000127|pid:none) Nitrosococcus oceani ATCC 19707...    65   2e-09
AH2101(AH2101) thioredoxin [imported] - Nostoc sp. (strain PCC 7...    65   2e-09
GM711552_1(GM711552|pid:none) Sequence 47 from Patent WO20080949...    65   2e-09
CP001154_1679(CP001154|pid:none) Laribacter hongkongensis HLHK9,...    65   2e-09
AY184796_1(AY184796|pid:none) Chlamydomonas reinhardtii thioredo...    65   2e-09
CS008405_1(CS008405|pid:none) Sequence 31 from Patent WO20050071...    65   2e-09
CU928166_43(CU928166|pid:none) Kluyveromyces thermotolerans stra...    65   2e-09
AP006841_3171(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,...    65   2e-09
CP000510_3007(CP000510|pid:none) Psychromonas ingrahamii 37, com...    65   2e-09
AE005174_4741(AE005174|pid:none) Escherichia coli O157:H7 EDL933...    65   2e-09
CP000758_806(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188...    65   2e-09
CP000544_924(CP000544|pid:none) Halorhodospira halophila SL1, co...    65   2e-09
AE017125_55(AE017125|pid:none) Helicobacter hepaticus ATCC 51449...    65   2e-09
AM889285_716(AM889285|pid:none) Gluconacetobacter diazotrophicus...    65   2e-09
CP000282_1329(CP000282|pid:none) Saccharophagus degradans 2-40, ...    65   2e-09
(Q9CM49) RecName: Full=Thioredoxin;          Short=Trx;  &AE0044...    65   2e-09
AJ605826_1(AJ605826|pid:none) Mesobuthus gibbosus partial trxt g...    65   2e-09
CP000356_401(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ...    65   2e-09
AE009442_1170(AE009442|pid:none) Xylella fastidiosa Temecula1, c...    65   2e-09
AJ426489_6(AJ426489|pid:none) Buchnera aphidicola (Pemphigus spy...    65   2e-09
AP009510_11(AP009510|pid:none) Uncultured Termite group 1 bacter...    65   2e-09
(Q9ZP21) RecName: Full=Thioredoxin M-type, chloroplastic;       ...    65   2e-09
CP000941_1249(CP000941|pid:none) Xylella fastidiosa M12, complet...    65   2e-09
EF103378_1(EF103378|pid:none) Haliotis discus discus thioredoxin...    65   2e-09
A96499(A96499) hypothetical protein T10P12.4 [imported] - Arabid...    65   3e-09
AM167904_2376(AM167904|pid:none) Bordetella avium 197N complete ...    65   3e-09
CP000514_468(CP000514|pid:none) Marinobacter aquaeolei VT8, comp...    65   3e-09
AE015924_237(AE015924|pid:none) Porphyromonas gingivalis W83, co...    65   3e-09
CP000251_2488(CP000251|pid:none) Anaeromyxobacter dehalogenans 2...    65   3e-09
CP000153_2091(CP000153|pid:none) Sulfurimonas denitrificans DSM ...    65   3e-09
CP000157_2302(CP000157|pid:none) Erythrobacter litoralis HTCC259...    65   3e-09
CP001087_1222(CP001087|pid:none) Desulfobacterium autotrophicum ...    65   3e-09
EF147316_1(EF147316|pid:none) Populus trichocarpa clone WS0122_J...    65   3e-09
CP001100_2485(CP001100|pid:none) Chloroherpeton thalassium ATCC ...    65   3e-09
CP000048_57(CP000048|pid:none) Borrelia hermsii DAH, complete ge...    65   3e-09
AY128276_1(AY128276|pid:none) Arabidopsis thaliana At1g43560/T10...    65   3e-09
CP000647_4230(CP000647|pid:none) Klebsiella pneumoniae subsp. pn...    65   3e-09
AP006725_130(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044...    65   3e-09
AM420293_6036(AM420293|pid:none) Saccharopolyspora erythraea NRR...    65   3e-09
AP008232_2387(AP008232|pid:none) Sodalis glossinidius str. 'mors...    65   3e-09
CP000653_3969(CP000653|pid:none) Enterobacter sp. 638, complete ...    65   3e-09
CP000826_159(CP000826|pid:none) Serratia proteamaculans 568, com...    65   3e-09
CP001600_86(CP001600|pid:none) Edwardsiella ictaluri 93-146, com...    65   3e-09
CP000077_1699(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6...    65   3e-09
AE001437_1527(AE001437|pid:none) Clostridium acetobutylicum ATCC...    64   4e-09
CP001341_3878(CP001341|pid:none) Arthrobacter chlorophenolicus A...    64   4e-09
BX842652_253(BX842652|pid:none) Bdellovibrio bacteriovorus compl...    64   4e-09
CP001080_365(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1...    64   4e-09
CP001339_350(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c...    64   4e-09
AE017220_3821(AE017220|pid:none) Salmonella enterica subsp. ente...    64   4e-09
BX571874_205(BX571874|pid:none) Photorhabdus luminescens subsp. ...    64   4e-09
CP001607_1300(CP001607|pid:none) Aggregatibacter aphrophilus NJ8...    64   4e-09
(P23400) RecName: Full=Thioredoxin M-type, chloroplastic;       ...    64   4e-09
AE017340_2350(AE017340|pid:none) Idiomarina loihiensis L2TR, com...    64   4e-09
CP000382_268(CP000382|pid:none) Clostridium novyi NT, complete g...    64   4e-09
AP009552_683(AP009552|pid:none) Microcystis aeruginosa NIES-843 ...    64   4e-09
CP000436_1352(CP000436|pid:none) Haemophilus somnus 129PT, compl...    64   4e-09
(P0A0K4) RecName: Full=Thioredoxin;          Short=Trx;  &(P0A0K...    64   4e-09
CS673612_1(CS673612|pid:none) Sequence 187 from Patent WO2007060...    64   4e-09
AE008921_91(AE008921|pid:none) Uncultured marine proteobacterium...    64   5e-09
(P08058) RecName: Full=Thioredoxin;          Short=Trx;  &A35135...    64   5e-09
CP001055_1001(CP001055|pid:none) Elusimicrobium minutum Pei191, ...    64   5e-09
CP000356_154(CP000356|pid:none) Sphingopyxis alaskensis RB2256, ...    64   5e-09
M54881_1(M54881|pid:none) Escherichia coli thioredoxin (trxA) ge...    64   5e-09
CP000139_1831(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    64   5e-09
CP000103_2069(CP000103|pid:none) Nitrosospira multiformis ATCC 2...    64   5e-09
CP000383_1331(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334...    64   5e-09
CP000806_3984(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...    64   5e-09
CP000507_3206(CP000507|pid:none) Shewanella amazonensis SB2B, co...    64   5e-09
CU459003_4217(CU459003|pid:none) Magnetospirillum gryphiswaldens...    64   5e-09
CR954205_95(CR954205|pid:none) Ostreococcus tauri strain OTTH059...    64   5e-09
CP000931_3857(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...    64   5e-09
CR543861_2737(CR543861|pid:none) Acinetobacter sp. ADP1 complete...    64   5e-09
AM942444_2015(AM942444|pid:none) Corynebacterium urealyticum DSM...    64   5e-09
CP001357_2587(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    64   5e-09
NRL(2TIR) Thioredoxin mutant with lys 36 replaced by glu (k36e) -      64   5e-09
CP000563_3862(CP000563|pid:none) Shewanella baltica OS155, compl...    64   5e-09
AY948980_1(AY948980|pid:none) Schistosoma mansoni mitochondrial ...    64   6e-09
CP001614_191(CP001614|pid:none) Teredinibacter turnerae T7901, c...    64   6e-09
AE015928_2229(AE015928|pid:none) Bacteroides thetaiotaomicron VP...    64   6e-09
CP001280_1391(CP001280|pid:none) Methylocella silvestris BL2, co...    64   6e-09
CP001056_2729(CP001056|pid:none) Clostridium botulinum B str. Ek...    64   6e-09
CP000503_504(CP000503|pid:none) Shewanella sp. W3-18-1, complete...    64   6e-09
CP000302_443(CP000302|pid:none) Shewanella denitrificans OS217, ...    64   6e-09
BA000039_810(BA000039|pid:none) Thermosynechococcus elongatus BP...    64   6e-09
CP000672_477(CP000672|pid:none) Haemophilus influenzae PittGG, c...    64   6e-09
CP000783_3659(CP000783|pid:none) Enterobacter sakazakii ATCC BAA...    64   6e-09
CP000471_3193(CP000471|pid:none) Magnetococcus sp. MC-1, complet...    64   6e-09
AM778920_24(AM778920|pid:none) Microcystis aeruginosa PCC 7806 g...    64   6e-09
CP000880_264(CP000880|pid:none) Salmonella enterica subsp. arizo...    64   6e-09
CP000473_304(CP000473|pid:none) Solibacter usitatus Ellin6076, c...    64   6e-09
CP000859_1507(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ...    63   8e-09
CP000388_4188(CP000388|pid:none) Pseudoalteromonas atlantica T6c...    63   8e-09
CP001349_1563(CP001349|pid:none) Methylobacterium nodulans ORS 2...    63   8e-09
CR380951_15(CR380951|pid:none) Candida glabrata strain CBS138 ch...    63   8e-09
AP011115_3471(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp...    63   8e-09
CP000822_189(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,...    63   8e-09
CP001132_794(CP001132|pid:none) Acidithiobacillus ferrooxidans A...    63   8e-09
CP001229_115(CP001229|pid:none) Sulfurihydrogenibium azorense Az...    63   8e-09
(Q7M1B9) RecName: Full=Thioredoxin;          Short=Trx;  &CP0009...    63   1e-08
CP000153_1859(CP000153|pid:none) Sulfurimonas denitrificans DSM ...    63   1e-08
BX571658_94(BX571658|pid:none) Wolinella succinogenes, complete ...    63   1e-08
AE013599_3139(AE013599|pid:none) Drosophila melanogaster chromos...    63   1e-08
(P66928) RecName: Full=Thioredoxin;          Short=Trx;  &(P6692...    63   1e-08
FN318922_1(FN318922|pid:none) Schistosoma japonicum isolate Anhu...    63   1e-08
CP000780_1790(CP000780|pid:none) Candidatus Methanoregula boonei...    63   1e-08
CR522870_810(CR522870|pid:none) Desulfotalea psychrophila LSv54 ...    63   1e-08
CP001130_616(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co...    63   1e-08
CP000828_1797(CP000828|pid:none) Acaryochloris marina MBIC11017,...    63   1e-08
CP000686_972(CP000686|pid:none) Roseiflexus sp. RS-1, complete g...    63   1e-08
AE017354_2873(AE017354|pid:none) Legionella pneumophila subsp. p...    63   1e-08
CP000254_2412(CP000254|pid:none) Methanospirillum hungatei JF-1,...    63   1e-08
(Q9X2T1) RecName: Full=Thioredoxin;          Short=Trx;  &AE0040...    63   1e-08
CP000510_2480(CP000510|pid:none) Psychromonas ingrahamii 37, com...    63   1e-08
AY552545_38(AY552545|pid:none) Uncultured marine gamma proteobac...    63   1e-08
DQ214931_1(DQ214931|pid:none) Taeniopygia guttata clone 0058P001...    63   1e-08
CP000556_227(CP000556|pid:none) Methylibium petroleiphilum PM1 p...    63   1e-08
AP009178_1550(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom...    63   1e-08
AK301837_1(AK301837|pid:none) Homo sapiens cDNA FLJ55158 complet...    62   1e-08
AM260525_26(AM260525|pid:none) Bartonella tribocorum CIP 105476 ...    62   1e-08
AY894105_1(AY894105|pid:none) Synthetic construct Homo sapiens c...    62   1e-08
CP000393_3000(CP000393|pid:none) Trichodesmium erythraeum IMS101...    62   1e-08
CP001072_518(CP001072|pid:none) Helicobacter pylori Shi470, comp...    62   1e-08
CP001341_1417(CP001341|pid:none) Arthrobacter chlorophenolicus A...    62   1e-08
CP000507_734(CP000507|pid:none) Shewanella amazonensis SB2B, com...    62   1e-08
CP000679_1649(CP000679|pid:none) Caldicellulosiruptor saccharoly...    62   1e-08
AF276920_1(AF276920|pid:none) Homo sapiens thioredoxin 2 (TRX2) ...    62   1e-08
CU928162_2947(CU928162|pid:none) Escherichia coli ED1a chromosom...    62   1e-08
CP000394_2011(CP000394|pid:none) Granulibacter bethesdensis CGDN...    62   1e-08
CP000025_138(CP000025|pid:none) Campylobacter jejuni RM1221, com...    62   1e-08
CP001281_2911(CP001281|pid:none) Thauera sp. MZ1T, complete geno...    62   1e-08
(Q99757) RecName: Full=Thioredoxin, mitochondrial;          Shor...    62   1e-08
BX897699_26(BX897699|pid:none) Bartonella henselae strain Housto...    62   1e-08
AX461034_1(AX461034|pid:none) Sequence 24 from Patent WO0222823.       62   1e-08
AM933172_2568(AM933172|pid:none) Salmonella enterica subsp. ente...    62   2e-08
CP000792_113(CP000792|pid:none) Campylobacter concisus 13826, co...    62   2e-08
CP001393_1553(CP001393|pid:none) Anaerocellum thermophilum DSM 6...    62   2e-08
AE002098_1309(AE002098|pid:none) Neisseria meningitidis MC58, co...    62   2e-08
CP001329_480(CP001329|pid:none) Micromonas sp. RCC299 chromosome...    62   2e-08
CP000240_190(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13...    62   2e-08
CP000158_1849(CP000158|pid:none) Hyphomonas neptunium ATCC 15444...    62   2e-08
CP000239_735(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, comp...    62   2e-08
CP000489_2760(CP000489|pid:none) Paracoccus denitrificans PD1222...    62   2e-08
CP000089_925(CP000089|pid:none) Dechloromonas aromatica RCB, com...    62   2e-08
CP000361_2024(CP000361|pid:none) Arcobacter butzleri RM4018, com...    62   2e-08
AE014296_469(AE014296|pid:none) Drosophila melanogaster chromoso...    62   2e-08
AC010718_13(AC010718|pid:none) Arabidopsis thaliana chromosome 1...    62   2e-08
CP000316_2221(CP000316|pid:none) Polaromonas sp. JS666, complete...    62   2e-08
(P59527) RecName: Full=Thioredoxin;          Short=Trx;  &AE0168...    62   2e-08
AP009179_679(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D...    62   2e-08
(P50338) RecName: Full=Thioredoxin;          Short=Trx;  &S46522...    62   2e-08
AC126014_6(AC126014|pid:none) Medicago truncatula clone mth2-18j...    62   2e-08
CP000155_1257(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    62   2e-08
D87741_1(D87741|pid:none) Bovine mRNA for mitochondrial thioredo...    62   2e-08
AE017340_1982(AE017340|pid:none) Idiomarina loihiensis L2TR, com...    62   2e-08
CP000478_1691(CP000478|pid:none) Syntrophobacter fumaroxidans MP...    62   2e-08
AL928587_2(AL928587|pid:none) Mouse DNA sequence from clone RP23...    62   2e-08
CP001399_1717(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,...    62   2e-08
AD0397(AD0397) thioredoxin 2 [imported] - Yersinia pestis (strai...    62   2e-08
BC082341_1(BC082341|pid:none) Xenopus tropicalis txn2 protein, m...    62   2e-08
BC033461_1(BC033461|pid:none) Mus musculus DnaJ (Hsp40) homolog,...    62   2e-08
AE015928_677(AE015928|pid:none) Bacteroides thetaiotaomicron VPI...    62   2e-08
CP000661_2924(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17...    62   2e-08
CP000393_2886(CP000393|pid:none) Trichodesmium erythraeum IMS101...    62   2e-08
CP000127_566(CP000127|pid:none) Nitrosococcus oceani ATCC 19707,...    62   2e-08
AL111168_137(AL111168|pid:none) Campylobacter jejuni subsp. jeju...    62   2e-08
CP000511_5969(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1...    62   2e-08
CP000462_89(CP000462|pid:none) Aeromonas hydrophila subsp. hydro...    62   2e-08
(P97615) RecName: Full=Thioredoxin, mitochondrial;          Shor...    62   2e-08
CP000251_2193(CP000251|pid:none) Anaeromyxobacter dehalogenans 2...    62   2e-08
(P97493) RecName: Full=Thioredoxin, mitochondrial;          Shor...    62   2e-08
CP001050_1258(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945...    62   2e-08
CP000644_4001(CP000644|pid:none) Aeromonas salmonicida subsp. sa...    62   2e-08
BX897700_24(BX897700|pid:none) Bartonella quintana str. Toulouse...    62   2e-08
AP009493_2103(AP009493|pid:none) Streptomyces griseus subsp. gri...    61   3e-08
CP000252_2195(CP000252|pid:none) Syntrophus aciditrophicus SB, c...    61   3e-08
FM992695_901(FM992695|pid:none) Candida dubliniensis CD36 chromo...    61   3e-08
AE006641_332(AE006641|pid:none) Sulfolobus solfataricus P2, comp...    61   3e-08
BX640446_284(BX640446|pid:none) Bordetella bronchiseptica strain...    61   3e-08
AL591688_33(AL591688|pid:none) Sinorhizobium meliloti 1021 compl...    61   3e-08
AE017354_1386(AE017354|pid:none) Legionella pneumophila subsp. p...    61   3e-08
AL954747_1035(AL954747|pid:none) Nitrosomonas europaea ATCC 1971...    61   3e-08
CP001013_4083(CP001013|pid:none) Leptothrix cholodnii SP-6, comp...    61   3e-08
CR555306_2681(CR555306|pid:none) Azoarcus sp. EbN1 complete geno...    61   3e-08
CP000927_4836(CP000927|pid:none) Caulobacter sp. K31, complete g...    61   3e-08
DQ214930_1(DQ214930|pid:none) Taeniopygia guttata clone 0061P001...    61   3e-08
CP001154_588(CP001154|pid:none) Laribacter hongkongensis HLHK9, ...    61   3e-08
CP000409_2(CP000409|pid:none) Rickettsia canadensis str. McKiel,...    61   3e-08
BA000045_880(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D...    61   3e-08
BC142455_1(BC142455|pid:none) Bos taurus DnaJ (Hsp40) homolog, s...    61   4e-08
CP000768_132(CP000768|pid:none) Campylobacter jejuni subsp. doyl...    61   4e-08
CU468135_195(CU468135|pid:none) Erwinia tasmaniensis strain ET1/...    61   4e-08
AE017126_1137(AE017126|pid:none) Prochlorococcus marinus subsp. ...    61   4e-08
(O51890) RecName: Full=Thioredoxin;          Short=Trx;  &AE0132...    61   4e-08
NRL(1THO) Thioredoxin mutant with arg inserted between gly 33 An...    61   4e-08
BX640414_260(BX640414|pid:none) Bordetella pertussis strain Toha...    61   4e-08
CP000449_87(CP000449|pid:none) Maricaulis maris MCS10, complete ...    61   4e-08
CP000494_7320(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl...    61   4e-08
CP000633_24(CP000633|pid:none) Agrobacterium vitis S4 chromosome...    61   4e-08
AL157959_1394(AL157959|pid:none) Neisseria meningitidis serogrou...    61   4e-08
AY744381_6(AY744381|pid:none) Buchnera aphidicola (Cinara cedri)...    61   4e-08
BA000032_972(BA000032|pid:none) Vibrio parahaemolyticus RIMD 221...    61   4e-08
CP000628_26(CP000628|pid:none) Agrobacterium radiobacter K84 chr...    61   4e-08
CP000943_3937(CP000943|pid:none) Methylobacterium sp. 4-46, comp...    61   4e-08
AP009484_1323(AP009484|pid:none) Macrococcus caseolyticus JCSC54...    61   4e-08
AP009384_715(AP009384|pid:none) Azorhizobium caulinodans ORS 571...    61   4e-08
CP000937_1274(CP000937|pid:none) Francisella philomiragia subsp....    61   4e-08
CP000653_3041(CP000653|pid:none) Enterobacter sp. 638, complete ...    61   4e-08

>CP000633_3114(CP000633|pid:none) Agrobacterium vitis S4 chromosome
           1, complete sequence.
          Length = 334

 Score = 84.0 bits (206), Expect = 4e-15
 Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = +1

Query: 109 TRNFTSQVNKETWDKYVASNKKPVVVDFFATWCPPCKQLEPVLVKAV-EDYGKCDLYKYD 285
           T+ F   V +E       S ++PV+VDF+A WC PC+QL P++ KAV E  GK  L K +
Sbjct: 50  TQGFAKDVLEE-------SRRQPVLVDFWAPWCGPCRQLTPIIEKAVNEAKGKVKLVKMN 102

Query: 286 ISEEEGFHEKFGIQSIPHVIGFHNNKIVXEFKGAIPASQVKKHLEKFDEHLGG 444
           I E      + GIQSIP V+ F + +    F GA+P SQVK+ ++K     GG
Sbjct: 103 IDEHPAIAGQLGIQSIPAVVAFVDGRPADGFMGALPESQVKQFIDKLGGPDGG 155

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 720,050,381
Number of extensions: 12029146
Number of successful extensions: 48246
Number of sequences better than 10.0: 2415
Number of HSP's gapped: 47567
Number of HSP's successfully gapped: 2636
Length of query: 240
Length of database: 1,061,185,681
Length adjustment: 125
Effective length of query: 115
Effective length of database: 652,629,681
Effective search space: 75052413315
Effective search space used: 75052413315
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.63  gvh: 0.54  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.34  mip: 0.03
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: mitochondrial
	 28.0 %: cytoplasmic
	 28.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U04580-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0