NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04551-1
Contig ID Contig-U04551-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04551-1 (Contig-U04551-1Q) /CSM_Contig/Contig-U04551-1Q.Seq.d
GTAATAATTTTTAAAAATAAATATTAAATGGAAATATCCTATATAATTTT
TTTTTTTATTTAAAAAAAAAAAAAAAACAATGTTAATGTGGATAAAAAAT
TAAGGTTAAAACAAATTTAAATAATAAATTATTTTTTCGATCGACATTTT
CAGCTCTAAAGAAATTAAAAGTAATTAAGGGAAAAAAAAAAAATTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 243
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 2147313
End point 2147070
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U04551
List of clone(s) 

est1=SSB425F,1,244
Translated Amino Acid sequence 
nnf*k*ilngnilynfffylkkkkkqc*cg*KIKVKTNLNNKLFFRSTFSALKKLKVIKG
KKKN*kkkkkkkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
viifknky*meisyiifffi*kkkknnvnvdkklrlkqi*iinyffdrhfql*rn*k*lr
ekkkikkkkkkkkkkkkkkkk


Frame B:
**flkinikwkypi*ffflfkkkkktmlmwikn*g*nkfk**iifsidifsskeiksn*g
kkkklkkkkkkkkkkkkkkk


Frame C:
nnf*k*ilngnilynfffylkkkkkqc*cg*KIKVKTNLNNKLFFRSTFSALKKLKVIKG
KKKN*kkkkkkkkkkkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04551-1 (Contig-U04551-1Q)
/CSM_Contig/Contig-U04551-1Q.Seq.d
         (243 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04551-1 (Contig-U04551-1Q) /CSM_Contig/Conti...   206  8e-54
Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Conti...    42  3e-04
Contig-U10310-1 (Contig-U10310-1Q) /CSM_Contig/Conti...    40  0.001
Contig-U04232-1 (Contig-U04232-1Q) /CSM_Contig/Conti...    38  0.004
Contig-U14745-1 (Contig-U14745-1Q) /CSM_Contig/Conti...    36  0.016
Contig-U14252-1 (Contig-U14252-1Q) /CSM_Contig/Conti...    36  0.016
Contig-U11926-1 (Contig-U11926-1Q) /CSM_Contig/Conti...    36  0.016
Contig-U11921-1 (Contig-U11921-1Q) /CSM_Contig/Conti...    36  0.016
Contig-U11895-1 (Contig-U11895-1Q) /CSM_Contig/Conti...    36  0.016
Contig-U10963-1 (Contig-U10963-1Q) /CSM_Contig/Conti...    36  0.016

>Contig-U04551-1 (Contig-U04551-1Q) /CSM_Contig/Contig-U04551-1Q.Seq.d
          Length = 243

 Score =  206 bits (104), Expect = 8e-54
 Identities = 104/104 (100%)
 Strand = Plus / Plus

                                                                       
Query: 78  caatgttaatgtggataaaaaattaaggttaaaacaaatttaaataataaattatttttt 137
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  caatgttaatgtggataaaaaattaaggttaaaacaaatttaaataataaattatttttt 137

                                                       
Query: 138 cgatcgacattttcagctctaaagaaattaaaagtaattaaggg 181
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cgatcgacattttcagctctaaagaaattaaaagtaattaaggg 181


 Score = 91.7 bits (46), Expect = 3e-19
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                        
Query: 1  gtaataatttttaaaaataaatattaaatggaaatatcctatataa 46
          ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  gtaataatttttaaaaataaatattaaatggaaatatcctatataa 46


>Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Contig-U14161-1Q.Seq.d
          Length = 510

 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 4  ataatttttaaaaataaatattaaa 28
          |||||||||||||||||| ||||||
Sbjct: 67 ataatttttaaaaataaaaattaaa 43


>Contig-U10310-1 (Contig-U10310-1Q) /CSM_Contig/Contig-U10310-1Q.Seq.d
          Length = 1172

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 157 taaagaaattaaaagtaatt 176
           ||||||||||||||||||||
Sbjct: 173 taaagaaattaaaagtaatt 192


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9127
Number of Sequences: 6905
Number of extensions: 9127
Number of successful extensions: 3746
Number of sequences better than 10.0: 572
length of query: 243
length of database: 5,674,871
effective HSP length: 15
effective length of query: 228
effective length of database: 5,571,296
effective search space: 1270255488
effective search space used: 1270255488
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 6.23
Homology vs DNA 
Query= Contig-U04551-1 (Contig-U04551-1Q) /CSM_Contig/Contig-U04551-1Q.Seq.d
         (243 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BX901876) Zebrafish DNA sequence from clone CH211-140G2 in ...    38   0.002  2
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ...    54   0.002  1
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8...    54   0.002  1
(CU463197) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.024  2
(CU928831) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   0.024  2
(CU633363) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.037  1
(CU074285) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.037  1
(AC190354) Aotus nancymaae clone CH258-64M13, WORKING DRAFT ...    50   0.037  1
(AC187674) Aotus nancymaae clone CH258-44N1, WORKING DRAFT S...    50   0.037  1
(AC186474) Callicebus moloch clone LB5-406E19, WORKING DRAFT...    50   0.037  1
(EJ026747) 1095454028447 Global-Ocean-Sampling_GS-26-01-01-1...    50   0.037  1
(DX398587) GH__Sa0013F09.b1 Gossypium herbaceum WGS library ...    50   0.037  1
(EY695049) CS00-C3-700-032-C02-CT.F Sweet orange fruit, deve...    50   0.037  1
(AM447128) Vitis vinifera contig VV78X164754.5, whole genome...    44   0.087  2
(CU469521) Zebrafish DNA sequence from clone CH1073-143L10 i...    48   0.15   1
(AL844867) Mouse DNA sequence from clone RP23-17B8 on chromo...    48   0.15   1
(EK170641) 1095458072332 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.15   1
(DT569731) EST1080371 GH_TMO Gossypium hirsutum cDNA, mRNA s...    48   0.15   1
(DB781479) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB781280) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB780484) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB779599) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB778997) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB778554) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB777890) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB777887) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB777655) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB776918) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB776828) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB776576) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB776257) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB776246) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB776013) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB774667) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB774496) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB773852) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB773156) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB771962) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB771708) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB771703) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB771165) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB771151) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB770954) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB770790) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB770532) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB770089) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB768483) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB768285) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB767826) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB767063) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB765995) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB765797) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB764439) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB764018) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB763974) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB763946) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB763817) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB763402) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB763362) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB762876) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB762462) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB762157) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB759149) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB758669) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB758262) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB757845) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB757427) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB757074) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB756422) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755901) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755388) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755346) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755281) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755274) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755232) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(DB755077) Apis mellifera head cDNA, RIKEN full-length enric...    48   0.15   1
(CN859111) 000728AAAA008914HT (AAAA) Royal Gala 59 DAFB frui...    48   0.15   1
(BQ117266) EST602842 mixed potato tissues Solanum tuberosum ...    48   0.15   1
(BE341776) EST394608 potato stolon, Cornell University Solan...    48   0.15   1
(FC313420) CAIC3896.fwd CAIC Nematostella vectensis Nemve wh...    48   0.15   1
(EY326539) CAWY11669.fwd CAWY Helobdella robusta Subtracted ...    48   0.15   1
(EY320936) CAWX7637.fwd CAWX Helobdella robusta Primary Earl...    48   0.15   1
(AM440378) Vitis vinifera, whole genome shotgun sequence, co...    34   0.37   2
(EJ903463) 1093018501004 Global-Ocean-Sampling_GS-30-02-01-1...    38   0.47   2
(EJ910749) 1093018537100 Global-Ocean-Sampling_GS-30-02-01-1...    38   0.50   2
(CR932018) Zebrafish DNA sequence from clone DKEY-250C11 in ...    46   0.59   1
(AL844605) Mouse DNA sequence from clone RP24-115D19 on chro...    46   0.59   1
(AC084288) Mus musculus Strain C57BL6/J Chromosome 2 BAC, RP...    46   0.59   1
(CU302331) Medicago truncatula chromosome 5 clone mte1-35l19...    46   0.59   1
(AM474601) Vitis vinifera contig VV78X118509.10, whole genom...    46   0.59   1
(AM473981) Vitis vinifera contig VV78X189459.3, whole genome...    46   0.59   1
(AM471537) Vitis vinifera, whole genome shotgun sequence, co...    46   0.59   1
(AM469600) Vitis vinifera, whole genome shotgun sequence, co...    46   0.59   1
(AM468150) Vitis vinifera contig VV78X086105.8, whole genome...    46   0.59   1
(AM454648) Vitis vinifera contig VV78X176562.5, whole genome...    46   0.59   1
(AM429588) Vitis vinifera contig VV78X000327.1, whole genome...    46   0.59   1
(AX346148) Sequence 1219 from Patent WO0200928.                    46   0.59   1
(AF081829) Rhipicephalus sanguineus mitochondrial DNA, compl...    46   0.59   1
(AF077345) Homo sapiens cartilage-derived C-type lectin (CLE...    46   0.59   1
(AC116096) Homo sapiens chromosome 3 clone RP11-669C19, comp...    46   0.59   1
(AC096653) Homo sapiens BAC clone RP11-16P17 from 4, complet...    46   0.59   1
(AC079414) Homo sapiens chromosome 16 clone RP11-358L22, com...    46   0.59   1
(AC152139) Dasypus novemcinctus clone VMRC5-318F6, WORKING D...    46   0.59   1
(AC152134) Dasypus novemcinctus clone VMRC5-225P6, WORKING D...    46   0.59   1
(AC069533) Homo sapiens chromosome 3 clone RP11-79E6, WORKIN...    46   0.59   1
(CU467085) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   0.59   1
(CR932363) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   0.59   1
(BX957272) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   0.59   1
(AC230361) Bos taurus clone CH240-510M15, WORKING DRAFT SEQU...    46   0.59   1
(AC220859) Bos taurus clone CH240-343A1, WORKING DRAFT SEQUE...    46   0.59   1
(AC023667) Homo sapiens chromosome 4 clone RP11-14C3 map 4, ...    46   0.59   1
(BH557086) BOGSG38TF BOGS Brassica oleracea genomic clone BO...    46   0.59   1
(BH458228) BOGXP18TR BOGX Brassica oleracea genomic clone BO...    46   0.59   1
(BH422426) BOHQP14TR BOHQ Brassica oleracea genomic clone BO...    46   0.59   1
(FI120735) MUGQ_CH252P494J03Sp6_CH0198_008 CHORI-252 Vervet ...    46   0.59   1
(ER819713) PPTDT90TF Solanum tuberosum RHPOTKEY BAC ends Sol...    46   0.59   1
(EJ884969) 1093018413518 Global-Ocean-Sampling_GS-30-02-01-1...    46   0.59   1
(ED483539) MUGQ_CH252P111J20Sp6_CN62_072 CHORI-252 Vervet Mo...    46   0.59   1
(DX889058) KBrH016D03R KBrH, Brassica rapa HindIII BAC libra...    46   0.59   1
(DX504533) 527_13_14219167_5489_43928_078 Limanthese alba me...    46   0.59   1
(DE851029) Macropus eugenii DNA, BAC clone: MEB1-014D07_F, 5...    46   0.59   1
(CE030953) tigr-gss-dog-17000347369192 Dog Library Canis lup...    46   0.59   1
(CC503600) CH240_343A1.TARBAC13P2 CHORI-240 Bos taurus genom...    46   0.59   1
(BZ003994) oem73h03.g1 B.oleracea002 Brassica oleracea genom...    46   0.59   1
(BH954934) odh36c04.b1 B.oleracea002 Brassica oleracea genom...    46   0.59   1
(BH952512) odh02b01.b1 B.oleracea002 Brassica oleracea genom...    46   0.59   1
(AG291022) Mus musculus molossinus DNA, clone:MSMg01-065O20....    46   0.59   1
(DR892999) JGI_XZT26140.rev NIH_XGC_tropTad5 Xenopus (Silura...    46   0.59   1
(CX368606) JGI_XZT54561.rev NIH_XGC_tropTad5 Xenopus (Silura...    46   0.59   1
(CD317532) StrPu621.001894 Sea urchin unfertilised egg cDNA ...    46   0.59   1
(ES688438) CCAX9957.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES684862) CCAX8019.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES682776) CCAX6875.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES682729) CCAX6847.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES682676) CCAX6820.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES681379) CCAX6116.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES680508) CCAX5640.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES679869) CCAX5292.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES677636) CCAX3895.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES676183) CCAX2771.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES675831) CCAX2567.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(ES675577) CCAX2425.g1 NICHD_XGC_tropEye1 Xenopus (Silurana)...    46   0.59   1
(AC006593) Arabidopsis thaliana chromosome 2 clone F16D14 ma...    44   0.64   2
(AC024895) Homo sapiens chromosome 3 clone RP11-368C9, WORKI...    38   1.2    3
(CR354393) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   1.2    2
(BX855592) Zebrafish DNA sequence from clone CH211-232K3 in ...    36   1.2    2
(AC105031) Homo sapiens chromosome 8, clone CTD-2272D18, com...    34   1.2    2
(AM474603) Vitis vinifera contig VV78X099721.7, whole genome...    36   1.4    2
(CL473458) SAIL_1_D05.v1 SAIL Collection Arabidopsis thalian...    36   1.4    3
(EJ973909) 1093022102017 Global-Ocean-Sampling_GS-30-02-01-1...    38   1.5    2
(BZ033568) oeh05h08.g1 B.oleracea002 Brassica oleracea genom...    42   1.5    2
(EB475469) AGENCOURT_73665308 NICHD_XGC_int_m Xenopus laevis...    36   1.6    2
(GC697265) Sequence 12510 from patent US 6812339.                  38   1.7    3
(BZ426572) BONPJ01TF BO_1.6_2_KB_tot Brassica oleracea genom...    40   1.8    2
(BV465725) G591P64717FF1.T0 Clint Pan troglodytes verus STS ...    36   1.8    2
(EJ439924) 1093015300095 Global-Ocean-Sampling_GS-28-01-01-1...    38   1.8    2
(AM487876) Vitis vinifera contig VV78X155704.10, whole genom...    44   1.8    2
(FI033455) CHO_OF6446xc16f1.ab1 CHO_OF6 Nicotiana tabacum ge...    40   1.9    2
(EK376134) 1095469440635 Global-Ocean-Sampling_GS-31-01-01-1...    34   1.9    2
(BU172162) AGENCOURT_7960186 NIH_MGC_72 Homo sapiens cDNA cl...    42   1.9    2
(EJ961746) 1093022007264 Global-Ocean-Sampling_GS-30-02-01-1...    38   2.0    2
(EK434812) 1095521024246 Global-Ocean-Sampling_GS-31-01-01-1...    42   2.0    2
(CU929054) Zebrafish DNA sequence from clone CH73-206B14 in ...    44   2.3    1
(CR847829) Zebrafish DNA sequence from clone RP71-49N9 in li...    44   2.3    1
(AC146503) Danio rerio clone CH211-271F10, complete sequence.      44   2.3    1
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         44   2.3    1
(BV649915) S216P60246RD7.T0 Masuku Pan troglodytes troglodyt...    44   2.3    1
(AL805907) Mouse DNA sequence from clone RP23-262M20 on chro...    44   2.3    1
(AC161793) Mus musculus chromosome 7, clone RP23-80J7, compl...    44   2.3    1
(AC122246) Mus musculus BAC clone RP23-152K13 from 1, comple...    44   2.3    1
(AP000731) Arabidopsis thaliana genomic DNA, chromosome 3, B...    44   2.3    1
(AM480421) Vitis vinifera contig VV78X268042.4, whole genome...    44   2.3    1
(AM474832) Vitis vinifera contig VV78X005166.9, whole genome...    44   2.3    1
(AM461391) Vitis vinifera contig VV78X158191.6, whole genome...    44   2.3    1
(AM454247) Vitis vinifera contig VV78X080236.4, whole genome...    44   2.3    1
(AM454124) Vitis vinifera contig VV78X022284.12, whole genom...    44   2.3    1
(AM449502) Vitis vinifera contig VV78X221419.5, whole genome...    44   2.3    1
(AM446093) Vitis vinifera contig VV78X032267.8, whole genome...    44   2.3    1
(AM442542) Vitis vinifera, whole genome shotgun sequence, co...    44   2.3    1
(AM427851) Vitis vinifera contig VV78X097497.21, whole genom...    44   2.3    1
(AC184064) Populus trichocarpa clone Pop1-109C22, complete s...    44   2.3    1
(AC137079) Medicago truncatula clone mth2-27d17, complete se...    44   2.3    1
(AX392734) Sequence 24 from Patent WO0212526.                      44   2.3    1
(AR707081) Sequence 24 from patent US 6933145.                     44   2.3    1
(CT737253) Pig DNA sequence from clone CH242-97O12 on chromo...    44   2.3    1
(EF175763) Romanomermis nielseni mitochondrion, complete gen...    44   2.3    1
(AF304319) Neospora caninum small subunit ribosomal RNA and ...    44   2.3    1
(AF304315) Neospora caninum small subunit ribosomal RNA gene...    44   2.3    1
(AF040973) Neospora caninum small subunit ribosomal RNA gene...    44   2.3    1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    44   2.3    1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    44   2.3    1
(AL353354) Human DNA sequence from clone RP3-429K2 on chromo...    44   2.3    1
(AC138781) Homo sapiens BAC clone RP11-366H4 from 4, complet...    44   2.3    1
(AC137561) Homo sapiens 12 BAC RP11-678N14 (Roswell Park Can...    44   2.3    1
(AC012312) Homo sapiens chromosome 5 clone CTC-558O19, compl...    44   2.3    1
(AC008534) Homo sapiens chromosome 5 clone CTC-484P3, comple...    44   2.3    1
(AC162229) Bos taurus clone CH240-111L19, WORKING DRAFT SEQU...    44   2.3    1
(AC161794) Mus musculus chromosome 7 clone RP24-77L4 map 7, ...    44   2.3    1
(AC161671) Bos taurus clone CH240-104B2, WORKING DRAFT SEQUE...    44   2.3    1
(AC157261) Rhinolophus ferrumequinum clone VMRC7-261C3, WORK...    44   2.3    1
(AC148856) Otolemur garnettii clone CH256-528G23, WORKING DR...    44   2.3    1
(AC148054) Atelerix albiventris clone LB4-124B14, WORKING DR...    44   2.3    1
(AC145658) Homo sapiens chromosome UNK clone XXFOS-85464D6, ...    44   2.3    1
(AC140671) Medicago truncatula clone mth2-9h24, WORKING DRAF...    44   2.3    1
(AC121090) Mus musculus chromosome 15 clone RP24-189A18 map ...    44   2.3    1
(AC111428) Rattus norvegicus clone CH230-246F11, WORKING DRA...    44   2.3    1
(AC109622) Mus musculus clone RP23-346C12, WORKING DRAFT SEQ...    44   2.3    1
(CU856616) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   2.3    1
(CU856024) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   2.3    1
(CU469248) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   2.3    1
(AC027421) Homo sapiens chromosome 1 clone RP11-1C6 map 1, W...    44   2.3    1
(AC027303) Homo sapiens chromosome 5 clone CTB-100B21, WORKI...    44   2.3    1
(AC025860) Homo sapiens chromosome 1 clone RP11-692J20 map 1...    44   2.3    1
(CT954338) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   2.3    1
(CR936853) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    44   2.3    1
(AC230328) Bos taurus clone CH240-512M3, WORKING DRAFT SEQUE...    44   2.3    1
(AC216314) Tupaia belangeri clone CH275-489A12, WORKING DRAF...    44   2.3    1
(AC189839) Atelerix albiventris clone LB4-147C22, WORKING DR...    44   2.3    1
(AC164129) Bos taurus clone CH240-121A9, WORKING DRAFT SEQUE...    44   2.3    1
(BH487251) BOHPX80TR BOHP Brassica oleracea genomic clone BO...    44   2.3    1
(FI231441) CccaBb001-H17JF CccABb Cajanus cajan genomic clon...    44   2.3    1
(ET648523) JBVRY11TR JBVR Allium cepa genomic clone JBVRW_RX...    44   2.3    1
(ET645238) JBVRY11TF JBVR Allium cepa genomic clone JBVRW_RX...    44   2.3    1
(ER631037) 1093018443561 Global-Ocean-Sampling_GS-36-01-01-2...    44   2.3    1
(EK335357) 1095467040104 Global-Ocean-Sampling_GS-31-01-01-1...    44   2.3    1
(EJ577189) 1092960119150 Global-Ocean-Sampling_GS-29-01-01-1...    44   2.3    1
(EI328702) GM_WBc0067C23.f GM_WBc Glycine max genomic clone ...    44   2.3    1
(DX465060) Cpl06888 Papaya Genomic DNA BAC Library Carica pa...    44   2.3    1
(DH457242) Macropus eugenii DNA with T7 primer, fosmid clone...    44   2.3    1
(CZ969481) 169664 Tomato MboI BAC Library Solanum lycopersic...    44   2.3    1
(CT535536) A BAC library has been constructed from cultivar ...    44   2.3    1
(CE637141) tigr-gss-dog-17000366760594 Dog Library Canis lup...    44   2.3    1
(CE428501) tigr-gss-dog-17000362886722 Dog Library Canis lup...    44   2.3    1
(CC272074) CH261-67J24_RM1.1 CH261 Gallus gallus genomic clo...    44   2.3    1
(AG276630) Mus musculus molossinus DNA, clone:MSMg01-046D01....    44   2.3    1
(EL905724) INIT2_5_C11.g1_A006 G5 trophont cDNA (INIT2) Icht...    44   2.3    1
(CO384456) AGENCOURT_26625155 NIH_MGC_253 Rattus norvegicus ...    44   2.3    1
(BF296477) 037PbF03 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ...    44   2.3    1
(BB975456) Plasmodium berghei str. ANKA cDNA clone: OK005286...    44   2.3    1
(FL447712) 25737695 CERES-502 Zea mays cDNA clone 1702405 3'...    44   2.3    1
(EX826432) CcLXMa65g02n1 Montse common carp adult head and k...    44   2.3    1
(AM482947) Vitis vinifera contig VV78X268987.1, whole genome...    38   2.6    2
(AC133957) Mus musculus BAC clone RP23-367D8 from chromosome...    36   2.7    2
(EJ626676) 1092963192601 Global-Ocean-Sampling_GS-29-01-01-1...    34   3.0    3
(FH547229) CHO_OF4513xg07r1.ab1 CHO_OF4 Nicotiana tabacum ge...    34   3.0    3
(ED727405) GM_WBb0083A09.f GM_WBb Glycine max genomic clone ...    30   3.1    3
(AM462567) Vitis vinifera contig VV78X235720.6, whole genome...    34   3.5    3
(AM465640) Vitis vinifera contig VV78X062970.13, whole genom...    40   3.8    2
(AC116387) Mus musculus chromosome 18, clone RP23-37P9, comp...    36   3.9    4
(AC151072) Bos taurus clone CH240-209O1, WORKING DRAFT SEQUE...    34   4.0    3
(AC023522) Homo sapiens clone RP11-21K13, WORKING DRAFT SEQU...    42   4.0    3
(AC204337) Macaca mulatta  BAC CH250-528C5 (Children's Hospi...    40   4.0    2
(EW898637) G894P5129FJ6.T0 Ixodes scapularis Pooled Non-infe...    36   4.2    2
(AL035477) Plasmodium falciparum MAL4P4.                           32   4.3    2
(EG960700) AU_Ich_002A_G04 Whole organism normalized cDNA li...    34   4.4    2
(CT737140) Pan troglodytes chromosome X clone CH251-1E12, **...    40   4.4    2
(AC221321) Bos taurus clone CH240-403I6, WORKING DRAFT SEQUE...    36   4.5    2
(AC206081) Tupaia belangeri clone CH275-117F18, WORKING DRAF...    38   4.6    3
(AC216691) Populus trichocarpa clone POP102-M12, complete se...    32   4.6    2
(CB551122) MMSP0043_C12 MMSP Macaca mulatta cDNA, mRNA seque...    38   4.8    2
(AM482248) Vitis vinifera contig VV78X044248.8, whole genome...    32   4.8    2
(AC208932) Populus trichocarpa clone JGIACSB1081-D10, comple...    34   4.8    2
(AM489321) Vitis vinifera contig VV78X131434.8, whole genome...    40   4.9    2
(AC152778) Bos taurus clone CH240-15L11, WORKING DRAFT SEQUE...    40   5.1    2
(AM466540) Vitis vinifera contig VV78X029530.3, whole genome...    32   5.4    2
(DU208670) 1098574240874 CHORI-243 Ovis aries genomic clone ...    34   5.4    2
(AM455071) Vitis vinifera contig VV78X106484.4, whole genome...    34   5.5    2
(CT185150) Sus scrofa genomic clone CH242-114L19, genomic su...    38   5.6    2
(AG278474) Mus musculus molossinus DNA, clone:MSMg01-048M20....    32   5.8    2
(CL828775) OR_CBa0050D21.f OR_CBa Oryza rufipogon genomic cl...    38   5.8    2
(CL074779) CH216-134I12_Sp6.1 CH216 Xenopus (Silurana) tropi...    34   5.9    2
(GC699184) Sequence 14429 from patent US 6812339.                  38   5.9    3
(CN623672) tae57g04.x1 Hydra EST Darmstadt I Hydra magnipapi...    32   5.9    2
(AC215560) Equus caballus clone CH241-46A9, WORKING DRAFT SE...    38   6.0    3
(FH396657) CHO_OF4806xm14r1.ab1 CHO_OF4 Nicotiana tabacum ge...    40   6.0    2
(EJ411639) 1093012149701 Global-Ocean-Sampling_GS-28-01-01-1...    32   6.3    2
(AM453391) Vitis vinifera contig VV78X010339.6, whole genome...    34   6.3    2
(FH639066) CHO_OF4063xh13f1.ab1 CHO_OF4 Nicotiana tabacum ge...    40   6.4    2
(EK438173) 1095521143201 Global-Ocean-Sampling_GS-31-01-01-1...    40   6.4    2
(EK117698) 1092963264734 Global-Ocean-Sampling_GS-31-01-01-1...    32   6.5    2
(EW821987) G894P51RN1.T0 Ixodes scapularis Pooled Non-infect...    36   6.6    2
(EK243661) 1095460244386 Global-Ocean-Sampling_GS-31-01-01-1...    32   6.6    2
(CF885572) tric082xa09.g1 T.reesei mycelial culture, Version...    36   6.6    2
(AC113974) Mus musculus chromosome 18, clone RP23-140D3, com...    36   6.6    4
(ER870197) POTJY82TF Solanum tuberosum RHPOTKEY BAC ends Sol...    38   6.7    2
(EK465184) 1095469418844 Global-Ocean-Sampling_GS-32-01-01-1...    36   6.7    2
(EW825051) G894P574RD15.T0 Ixodes scapularis Pooled Non-infe...    36   6.7    2
(AC097210) Rattus norvegicus clone CH230-207E1, WORKING DRAF...    38   6.9    3
(FH541787) CHO_OF4767xn06r1.ab1 CHO_OF4 Nicotiana tabacum ge...    40   7.0    2
(CG970748) MBEHU13TR mth2 Medicago truncatula genomic clone ...    38   7.1    2
(FH573260) CHO_OF4886xf07r1.ab1 CHO_OF4 Nicotiana tabacum ge...    40   7.1    2
(EK386364) 1095469484860 Global-Ocean-Sampling_GS-31-01-01-1...    40   7.1    2
(CU407120) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   7.1    3
(DU958686) 228892 Tomato MboI BAC Library Solanum lycopersic...    34   7.2    2
(DX559763) GH_MBb0033P05f GH_MBb Gossypium hirsutum genomic ...    34   7.5    2
(FG299469) 1108793335775 New World Screwworm Larvae 9387 EST...    36   8.2    2
(AX345695) Sequence 766 from Patent WO0200928.                     38   8.4    2
(AC092575) Homo sapiens BAC clone RP11-4C18 from 2, complete...    42   8.6    3
(AM473914) Vitis vinifera contig VV79X004919.2, whole genome...    40   8.9    2
(CT027702) Zebrafish DNA sequence from clone DKEY-15H14 in l...    42   9.1    1
(BX681417) Zebrafish DNA sequence from clone DKEY-161L11 in ...    42   9.1    1
(BX294126) Zebrafish DNA sequence from clone DKEYP-35B8 in l...    42   9.1    1
(BX005384) Zebrafish DNA sequence from clone DKEY-114E11.          42   9.1    1
(BC061954) Danio rerio heme oxygenase (decycling) 1, mRNA (c...    42   9.1    1
(AL935192) Zebrafish DNA sequence from clone CH211-252B2.          42   9.1    1
(BV754007) pRRL2:Newb:20080411:124310 USMARC Pig Breed SNP D...    42   9.1    1
(BV280443) S232P6171RG4.T0 Beagle Canis familiaris STS genom...    42   9.1    1
(BV069406) S212P60393FC7.T0 CZECHII/Ei Mus musculus STS geno...    42   9.1    1
(AL928632) Mouse DNA sequence from clone RP23-303M15 on chro...    42   9.1    1
(AL772214) Mouse DNA sequence from clone RP23-370C18 on chro...    42   9.1    1
(AL645849) Mouse DNA sequence from clone RP23-14F5 on chromo...    42   9.1    1
(AL645823) Mouse DNA sequence from clone RP23-288I22 on chro...    42   9.1    1
(AC174160) Mus musculus chromosome 1, clone wi1-2075L23, com...    42   9.1    1
(AC167979) Mus musculus BAC clone CH36-45M24 from chromosome...    42   9.1    1
(AC164882) Mus musculus BAC clone RP23-88F16 from chromosome...    42   9.1    1
(AC163032) Mus musculus BAC clone RP24-144G20 from chromosom...    42   9.1    1
(AC160999) Mus musculus BAC clone RP23-58I16 from chromosome...    42   9.1    1
(AC139637) Mus musculus chromosome 15, clone RP24-253M12, co...    42   9.1    1
(AC132116) Mus musculus BAC clone RP24-158K7 from chromosome...    42   9.1    1
(AC125274) Mus musculus chromosome 15, clone RP24-157F9, com...    42   9.1    1
(AC123915) Mus musculus chromosome 1, clone RP23-108H22, com...    42   9.1    1
(AC121890) Mus musculus BAC clone RP24-146K18 from chromosom...    42   9.1    1
(AC116470) Mus musculus chromosome 16, clone RP23-383N18, co...    42   9.1    1
(AC112663) Mus musculus chromosome 5, clone RP23-465J5, comp...    42   9.1    1
(AC104893) Mus musculus chromosome 1, clone RP23-288O15, com...    42   9.1    1
(AC083910) Mus musculus 1 BAC RP23-337F12 (Roswell Park Canc...    42   9.1    1
(AC146357) Otolemur garnettii clone CH256-396G19, complete s...    42   9.1    1
(DQ162948) Phytophthora pistaciae strain IMI386658 tRNA-Tyr ...    42   9.1    1
(CU302343) Medicago truncatula chromosome 5 clone mte1-48o9,...    42   9.1    1
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ...    42   9.1    1
(AM484797) Vitis vinifera contig VV78X030853.12, whole genom...    42   9.1    1
(AM484648) Vitis vinifera contig VV78X134003.7, whole genome...    42   9.1    1
(AM483988) Vitis vinifera, whole genome shotgun sequence, co...    42   9.1    1
(AM483901) Vitis vinifera contig VV78X266710.4, whole genome...    42   9.1    1
(AM482935) Vitis vinifera, whole genome shotgun sequence, co...    42   9.1    1
(AM482375) Vitis vinifera contig VV79X002059.2, whole genome...    42   9.1    1
(AM481634) Vitis vinifera contig VV78X097079.5, whole genome...    42   9.1    1
(AM481599) Vitis vinifera contig VV78X186415.8, whole genome...    42   9.1    1
(AM478829) Vitis vinifera contig VV78X153851.19, whole genom...    42   9.1    1
(AM478469) Vitis vinifera contig VV78X233004.5, whole genome...    42   9.1    1
(AM475808) Vitis vinifera contig VV78X222938.30, whole genom...    42   9.1    1
(AM475796) Vitis vinifera contig VV78X108423.5, whole genome...    42   9.1    1
(AM475328) Vitis vinifera, whole genome shotgun sequence, co...    42   9.1    1
(AM473000) Vitis vinifera contig VV78X264666.5, whole genome...    42   9.1    1
(AM470860) Vitis vinifera contig VV78X074716.3, whole genome...    42   9.1    1
(AM470086) Vitis vinifera contig VV78X222444.7, whole genome...    42   9.1    1
(AM469526) Vitis vinifera contig VV78X059161.22, whole genom...    42   9.1    1
(AM466422) Vitis vinifera contig VV78X214718.10, whole genom...    42   9.1    1
(AM465502) Vitis vinifera contig VV78X023476.3, whole genome...    42   9.1    1
(AM464936) Vitis vinifera contig VV78X041794.4, whole genome...    42   9.1    1
(AM463953) Vitis vinifera contig VV78X237806.7, whole genome...    42   9.1    1
(AM463902) Vitis vinifera contig VV78X169325.33, whole genom...    42   9.1    1
(AM461436) Vitis vinifera contig VV78X196488.8, whole genome...    42   9.1    1
(AM459797) Vitis vinifera contig VV78X050242.3, whole genome...    42   9.1    1
(AM456450) Vitis vinifera contig VV78X104795.20, whole genom...    42   9.1    1
(AM453697) Vitis vinifera contig VV78X010230.5, whole genome...    42   9.1    1
(AM451537) Vitis vinifera contig VV78X180574.5, whole genome...    42   9.1    1
(AM442214) Vitis vinifera contig VV78X027531.5, whole genome...    42   9.1    1
(AM440959) Vitis vinifera contig VV78X130550.4, whole genome...    42   9.1    1
(AM438267) Vitis vinifera, whole genome shotgun sequence, co...    42   9.1    1
(AM436607) Vitis vinifera contig VV78X270004.3, whole genome...    42   9.1    1
(AM435023) Vitis vinifera contig VV78X124074.19, whole genom...    42   9.1    1
(AM434684) Vitis vinifera contig VV78X060112.2, whole genome...    42   9.1    1
(AM431449) Vitis vinifera contig VV78X039659.9, whole genome...    42   9.1    1
(AM430937) Vitis vinifera contig VV78X022474.8, whole genome...    42   9.1    1
(AM430684) Vitis vinifera contig VV78X172808.12, whole genom...    42   9.1    1
(AM430589) Vitis vinifera contig VV78X126489.6, whole genome...    42   9.1    1
(AM430103) Vitis vinifera contig VV78X166216.26, whole genom...    42   9.1    1
(AM429824) Vitis vinifera contig VV78X247899.9, whole genome...    42   9.1    1
(AM429286) Vitis vinifera contig VV78X273942.12, whole genom...    42   9.1    1
(AM426469) Vitis vinifera contig VV78X077585.5, whole genome...    42   9.1    1
(AM423984) Vitis vinifera contig VV78X091401.6, whole genome...    42   9.1    1
(AC217036) Populus trichocarpa clone POP039-B10, complete se...    42   9.1    1
(AC216943) Populus trichocarpa clone POP051-N24, complete se...    42   9.1    1
(AC215898) Populus trichocarpa clone POP041-L02, complete se...    42   9.1    1
(AC214632) Populus trichocarpa clone POP076-H19, complete se...    42   9.1    1
(AC213083) Populus trichocarpa clone POP003-F15, complete se...    42   9.1    1
(AC211309) Populus trichocarpa clone POP016-I22, complete se...    42   9.1    1
(AC210550) Populus trichocarpa clone POP049-H01, complete se...    42   9.1    1
(AC210515) Populus trichocarpa clone POP118-O03, complete se...    42   9.1    1
(AC210387) Populus trichocarpa clone POP105-B09, complete se...    42   9.1    1
(AC208368) Populus trichocarpa clone JGIACSB21-H05, complete...    42   9.1    1
(AC189412) Brassica rapa subsp. pekinensis clone KBrB060F02,...    42   9.1    1
(AC189320) Brassica rapa subsp. pekinensis clone KBrB036H12,...    42   9.1    1
(AC182679) Populus trichocarpa clone Pop1-30I24, complete se...    42   9.1    1
(AC145023) Medicago truncatula chromosome 6 clone mth2-30j24...    42   9.1    1
(AC144644) Medicago truncatula clone mth2-14l3, complete seq...    42   9.1    1
(AC005957) Arabidopsis thaliana chromosome 2 clone T15J14 ma...    42   9.1    1
(EA426679) Sequence 36 from patent US 7332275.                     42   9.1    1
(EA426678) Sequence 35 from patent US 7332275.                     42   9.1    1
(EA333120) Sequence 5612 from patent US 7306913.                   42   9.1    1
(DJ386598) Diagnosis of Diseases Associated with Metastasis.       42   9.1    1
(DJ386597) Diagnosis of Diseases Associated with Metastasis.       42   9.1    1
(DI058935) Methods for generating databases and databases fo...    42   9.1    1
(DI008065) Methods for generating databases and databases fo...    42   9.1    1
(DD019107) METHODS FOR GENERATING DATABASES AND FOR IDENTIFY...    42   9.1    1
(DD019106) METHODS FOR GENERATING DATABASES AND FOR IDENTIFY...    42   9.1    1
(CQ877430) Sequence 18 from Patent WO2004081576.                   42   9.1    1
(CQ877429) Sequence 17 from Patent WO2004081576.                   42   9.1    1
(CQ877426) Sequence 14 from Patent WO2004081576.                   42   9.1    1
(CQ877425) Sequence 13 from Patent WO2004081576.                   42   9.1    1
(CQ493312) Sequence 25179 from Patent WO0160860.                   42   9.1    1
(BD452668) Diagnosis of Diseases Associated with tumor suppr...    42   9.1    1
(BD350417) METHODS FOR GENERATING DATABASES AND FOR IDENTIFY...    42   9.1    1
(BD350416) METHODS FOR GENERATING DATABASES AND FOR IDENTIFY...    42   9.1    1
(BD101185) Novel genes cloned in humanneuroblastoma and frag...    42   9.1    1
(BD021247) Novel gene and novel gene fragment cloned in huma...    42   9.1    1
(AX360265) Sequence 18 from Patent WO0204489.                      42   9.1    1
(AX360264) Sequence 17 from Patent WO0204489.                      42   9.1    1
(AX360261) Sequence 14 from Patent WO0204489.                      42   9.1    1
(AX360260) Sequence 13 from Patent WO0204489.                      42   9.1    1
(AX346219) Sequence 1290 from Patent WO0200928.                    42   9.1    1
(AX345555) Sequence 626 from Patent WO0200928.                     42   9.1    1
(AX345554) Sequence 625 from Patent WO0200928.                     42   9.1    1
(AX344651) Sequence 76 from Patent WO0200927.                      42   9.1    1
(AX344650) Sequence 75 from Patent WO0200927.                      42   9.1    1
(AX281394) Sequence 58 from Patent WO0177376.                      42   9.1    1
(AX281393) Sequence 57 from Patent WO0177376.                      42   9.1    1
(AX251147) Sequence 115 from Patent WO0168912.                     42   9.1    1
(AX112388) Sequence 36 from Patent WO0127857.                      42   9.1    1
(AX112387) Sequence 35 from Patent WO0127857.                      42   9.1    1
(GN008373) Sequence 814 from Patent EP2014669.                     42   9.1    1
(GC702333) Sequence 17578 from patent US 6812339.                  42   9.1    1
(GC697985) Sequence 13230 from patent US 6812339.                  42   9.1    1
(GC696706) Sequence 11950 from patent US 6812339.                  42   9.1    1
(AR759289) Sequence 18 from patent US 6958214.                     42   9.1    1
(AR759288) Sequence 17 from patent US 6958214.                     42   9.1    1
(AR759285) Sequence 14 from patent US 6958214.                     42   9.1    1
(AR759284) Sequence 13 from patent US 6958214.                     42   9.1    1
(AR659796) Sequence 837 from patent US 6900016.                    42   9.1    1
(AR659601) Sequence 642 from patent US 6900016.                    42   9.1    1
(EF488234) Sus scrofa adenylate kinase 3-like 1 (AK3L1) gene...    42   9.1    1
(CU633802) Pig DNA sequence from clone CH242-41L18 on chromo...    42   9.1    1
(AC164873) Sorex araneus, clone XX-26490757A10, complete seq...    42   9.1    1
(AC087160) Sus scrofa clone RP44-418J7, complete sequence.         42   9.1    1
(Y11430) T.gondii plastid DNA for tRNA-Ala, tRNA-Asp, tRNA-L...    42   9.1    1
(U88314) Caenorhabditis elegans cosmid C46H11, complete sequ...    42   9.1    1
(U87145) Toxoplasma gondii chloroplast, complete genome.           42   9.1    1
(U28056) Toxoplasma gondii small subunit rRNA gene, partial ...    42   9.1    1
(U15668) Myrmecia gulosa mitochondrion cytochrome b gene, pa...    42   9.1    1
(AY191789) Myrmecia gulosa cytochrome b gene, partial cds; m...    42   9.1    1
(AF150046) Amblyomma variegatum 12S small ribosomal RNA gene...    42   9.1    1
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    42   9.1    1
(DQ866809) Homo sapiens endoglin (Osler-Rendu-Weber syndrome...    42   9.1    1
(BC043436) Homo sapiens cDNA clone IMAGE:5296692.                  42   9.1    1
(BC001977) Homo sapiens, Similar to likely ortholog of yeast...    42   9.1    1
(AY485310) Homo sapiens phospholipase A2, group IVC (cytosol...    42   9.1    1
(AY358202) Homo sapiens clone DNA93013 RVLA1944 (UNQ1944) mR...    42   9.1    1
(AL589823) Human DNA sequence from clone RP11-341A22 on chro...    42   9.1    1
(AL359699) Human DNA sequence from clone RP11-130F5 on chrom...    42   9.1    1
(AL358943) Human DNA sequence from clone RP3-353O9 on chromo...    42   9.1    1
(AL357975) Human DNA sequence from clone RP11-72L13 on chrom...    42   9.1    1
(AL354985) Human DNA sequence from clone RP11-493B21 on chro...    42   9.1    1
(AL157935) Human DNA sequence from clone RP11-203J24 on chro...    42   9.1    1
(AL137257) Homo sapiens mRNA; cDNA DKFZp434C1613 (from clone...    42   9.1    1
(AL031347) Human DNA sequence from clone RP4-596H12 on chrom...    42   9.1    1
(AC114780) Homo sapiens BAC clone RP11-565M13 from 2, comple...    42   9.1    1
(AC093823) Homo sapiens BAC clone RP11-384K20 from 2, comple...    42   9.1    1
(AC084058) Homo sapiens chromosome 16 clone CTD-2119F7, comp...    42   9.1    1
(AC080132) Homo sapiens BAC clone RP11-166B20 from 4, comple...    42   9.1    1
(AC080125) Homo sapiens BAC clone RP11-175O15 from 2, comple...    42   9.1    1
(AC074182) Homo sapiens BAC clone RP11-553G13 from 2, comple...    42   9.1    1
(AC027020) Homo sapiens chromosome 15, clone RP11-526I2, com...    42   9.1    1
(AC026123) Homo sapiens 16 BAC RP11-174D5 (Roswell Park Canc...    42   9.1    1
(AC015723) Homo sapiens chromosome , clone RP11-168G16, comp...    42   9.1    1
(AC012308) Homo sapiens chromosome 10 clone RP11-5G18, compl...    42   9.1    1
(AC010458) Homo sapiens chromosome 19 clone CTD-2265M8, comp...    42   9.1    1
(AC007963) Homo sapiens chromosome 17, clone CTD-2010G8, com...    42   9.1    1
(AC005730) Homo sapiens chromosome 17, clone  hRPK.209_D_14,...    42   9.1    1
(AC157160) Bos taurus clone CH240-65C9, WORKING DRAFT SEQUEN...    42   9.1    1
(AC156902) Bos taurus clone CH240-60P15, WORKING DRAFT SEQUE...    42   9.1    1
(AC155669) Bos taurus clone CH240-45N11, WORKING DRAFT SEQUE...    42   9.1    1
(AC152044) Dasypus novemcinctus clone VMRC5-436A10, WORKING ...    42   9.1    1
(AC151185) Bos taurus clone CH240-158B3, WORKING DRAFT SEQUE...    42   9.1    1
(AC150587) Bos taurus clone CH240-337H2, WORKING DRAFT SEQUE...    42   9.1    1
(AC148657) Medicago truncatula chromosome 2 clone mth2-61k17...    42   9.1    1
(AC148323) Mus musculus chromosome UNK clone RP24-410F16, **...    42   9.1    1
(AC147195) Bos taurus clone RP42-466M15, WORKING DRAFT SEQUE...    42   9.1    1
(AC142509) Rattus norvegicus clone CH230-unknown, WORKING DR...    42   9.1    1
(AC142422) Rattus norvegicus clone CH230-64K9, WORKING DRAFT...    42   9.1    1
(AC141173) Rattus norvegicus clone CH230-429N20, WORKING DRA...    42   9.1    1
(AC133052) Rattus norvegicus clone CH230-225L10, WORKING DRA...    42   9.1    1
(AC130127) Rattus norvegicus clone CH230-214E13, WORKING DRA...    42   9.1    1
(AC122089) Rattus norvegicus clone CH230-270L9, *** SEQUENCI...    42   9.1    1
(AC120495) Mus musculus clone RP24-148B11, WORKING DRAFT SEQ...    42   9.1    1
(AC119991) Mus musculus clone RP24-555C22, LOW-PASS SEQUENCE...    42   9.1    1
(AC119725) Homo sapiens chromosome 3 clone RP11-759D18, WORK...    42   9.1    1
(AC112602) Rattus norvegicus clone CH230-329N2, *** SEQUENCI...    42   9.1    1
(AC110411) Rattus norvegicus clone CH230-29F21, *** SEQUENCI...    42   9.1    1
(AC109079) Rattus norvegicus clone CH230-230D15, *** SEQUENC...    42   9.1    1
(AC108197) Felis catus clone RP86-612M12, WORKING DRAFT SEQU...    42   9.1    1
(AC108191) Felis catus clone RP86-457A22, WORKING DRAFT SEQU...    42   9.1    1
(AC105684) Rattus norvegicus clone CH230-268F3, *** SEQUENCI...    42   9.1    1
(AC100683) Mus musculus clone RP23-168D6, LOW-PASS SEQUENCE ...    42   9.1    1
(AC097799) Rattus norvegicus clone CH230-46A18, WORKING DRAF...    42   9.1    1
(AC095806) Rattus norvegicus clone CH230-9J24, WORKING DRAFT...    42   9.1    1
(FP102635) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   9.1    1
(FP102155) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   9.1    1
(FP085533) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   9.1    1
(CU928828) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   9.1    1

>(BX901876) Zebrafish DNA sequence from clone CH211-140G2 in linkage
            group 18.
          Length = 155813

 Score = 38.2 bits (19), Expect(2) = 0.002
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 15   aaataaatattaaatggaa 33
            |||||||||||||||||||
Sbjct: 7540 aaataaatattaaatggaa 7558

 Score = 34.2 bits (17), Expect(2) = 0.002
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 3    aataatttttaaaaata 19
            |||||||||||||||||
Sbjct: 7507 aataatttttaaaaata 7523

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 196,849,731
Number of extensions: 19269188
Number of successful extensions: 6871332
Number of sequences better than 10.0: 738
Length of query: 243
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 220
Effective length of database: 99,442,330,388
Effective search space: 21877312685360
Effective search space used: 21877312685360
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.30
Homology vs Protein 
Query= Contig-U04551-1 (Contig-U04551-1Q) /CSM_Contig/Contig-U04551-1Q.Seq.d
         (243 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 165,960,830
Number of extensions: 1487703
Number of successful extensions: 1799
Number of sequences better than 10.0: 0
Number of HSP's gapped: 1799
Number of HSP's successfully gapped: 0
Length of query: 81
Length of database: 1,061,185,681
Length adjustment: 51
Effective length of query: 30
Effective length of database: 894,494,833
Effective search space: 26834844990
Effective search space used: 26834844990
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 27 (15.0 bits)
PSORT 

 psg: 0.80  gvh: 0.36  alm: 0.53  top: 0.53  tms: 0.00  mit: 0.40  mip: 0.00
 nuc: 0.24  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 64.0 %: nuclear
	 20.0 %: cytoplasmic
	 16.0 %: mitochondrial

>> prediction for Contig-U04551-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0