Contig-U04549-1
Contig ID Contig-U04549-1
Contig update 2001. 8.29
Contig sequence
>Contig-U04549-1 (Contig-U04549-1Q) /CSM_Contig/Contig-U04549-1Q.Seq.d
CATAAAGGTTTAATTGGTTTCATTCAAGATTATATTTTAAATTGTATTGG
TTGTCTTTGGTTTGATAGAGCTGAATCAAAAGATAGATTATTAGTTGCAC
AACAAATTTCAAAACATATTGAAAACGAAAATAATGACCCATTATTAATT
TTCCCAGAAGGTGTATGTGTTAATAATCAATATTGTGTTATGTTTAAAAA
AGGTGCATTTGAATTACCAAATGTTATTATCTATCCAGTTGCAATCAAAT
ATAATACATTATTTGTTGATGCATTTTGGAATTCAAAGAAACAATCATTT
ATTAGACATATGTTTAATTTAATGACATCATGGGCATTTGTTTGTGATGT
TTGGTATTTAGAACCACAAACAATTAGAGAAGGTGAAACAGCAACACAAT
TTGCTAATCGTGTTAAAGCAATGATTGCAAAGAAAGCTGGTATCATAAAT
GTACCATGGGATGGTTATTTGAAATACTTTAAACCAGGTTCAAGATTTGC
TGAACATAAACAAAAGATTTTTGCTTTTCGTTTTAAAAAGAAATTTGAAG
AACAATTAAATAATAGTAACAATAATATTAATAATAGTTTTGGTAGTGAT
GAAAATGAACATTGAAAATGATGGACAAGATAATAATAATAATAATGAAT
CCTCAAATAGTAGTATCGTAAAAAGATAATAATACTTCTTCAAGTATTAA
ACAAAGAAAATTGGCAACCCCAAACGAATAACTAAAAAAAATAAATAAAT
AATGAAAATAGTAAAAAAAAAAAAACAAAAAATAAAGAAATTGTATTAAA
TCAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 869
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4672282
End point 4673091
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 5
Link to clone list U04549
List of clone(s)

est1=VFE435Z,1,752
est2=SSB383F,17,354
est3=SSB383Z,346,763
est4=SSC607F,347,757
est5=VSA885Z,419,870
Translated Amino Acid sequence
HKGLIGFIQDYILNCIGCLWFDRAESKDRLLVAQQISKHIENENNDPLLIFPEGVCVNNQ
YCVMFKKGAFELPNVIIYPVAIKYNTLFVDAFWNSKKQSFIRHMFNLMTSWAFVCDVWYL
EPQTIREGETATQFANRVKAMIAKKAGIINVPWDGYLKYFKPGSRFAEHKQKIFAFRFKK
KFEEQLNNSNNNINNSFGSDENEH*k*wtr******ilk**yrkkiiillqvlnkenwqp
qtnn*kk*innenskkkktknkeivlnq*kkkkkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
HKGLIGFIQDYILNCIGCLWFDRAESKDRLLVAQQISKHIENENNDPLLIFPEGVCVNNQ
YCVMFKKGAFELPNVIIYPVAIKYNTLFVDAFWNSKKQSFIRHMFNLMTSWAFVCDVWYL
EPQTIREGETATQFANRVKAMIAKKAGIINVPWDGYLKYFKPGSRFAEHKQKIFAFRFKK
KFEEQLNNSNNNINNSFGSDENEH*k*wtr******ilk**yrkkiiillqvlnkenwqp
qtnn*kk*innenskkkktknkeivlnq*kkkkkkkkkkkkkkkkkkkk


Frame B:
ikv*lvsfkiif*ivlvvfglielnqkidy*lhnkfqnilktkimthy*fsqkvyvliin
ivlclkkvhlnyqmllsiqlqsniihyllmhfgiqrnnhlldicli**hhghlfvmfgi*
nhkqlekvkqqhnllivlkq*lqrklvs*myhgmvi*ntlnqvqdllninkrfllfvlkr
nlknn*iivtiiliivlvvmkmniendgqdnnnnnessnssivkr**yffky*tkkignp
kritkknk*imkivkkkkqkikkly*inkkkkkkkkkkkkkkkkkkkkk


Frame C:
*rfnwfhsrlyfklywlslv**s*ikr*iiscttnfkty*krk**piinfprrcmc**si
lcyv*krci*itkcyylsscnqi*yiic*cilefketiiy*tyv*fndimgicl*clvfr
ttnn*rr*nsntic*sc*sndckeswyhkctmgwlfeil*trfkic*t*tkdfcfsf*ke
i*rtik***q*y***fw***k*tlkmmdkiiiiimnpqivvs*kdnntsssikqrklatp
ne*lkkink**k**kkknkk*rnciksikkkkkkkkkkkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04549-1 (Contig-U04549-1Q)
/CSM_Contig/Contig-U04549-1Q.Seq.d
(869 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04549-1 (Contig-U04549-1Q) /CSM_Contig/Conti... 1247 0.0
Contig-U09342-1 (Contig-U09342-1Q) /CSM_Contig/Conti... 52 1e-06
Contig-U13317-1 (Contig-U13317-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U04694-1 (Contig-U04694-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U14698-1 (Contig-U14698-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U01897-1 (Contig-U01897-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U13711-1 (Contig-U13711-1Q) /CSM_Contig/Conti... 46 6e-05
Contig-U08861-1 (Contig-U08861-1Q) /CSM_Contig/Conti... 46 6e-05
Contig-U05215-1 (Contig-U05215-1Q) /CSM_Contig/Conti... 46 6e-05
Contig-U04626-1 (Contig-U04626-1Q) /CSM_Contig/Conti... 46 6e-05

>Contig-U04549-1 (Contig-U04549-1Q) /CSM_Contig/Contig-U04549-1Q.Seq.d
Length = 869

Score = 1247 bits (629), Expect = 0.0
Identities = 629/629 (100%)
Strand = Plus / Plus


Query: 1 cataaaggtttaattggtttcattcaagattatattttaaattgtattggttgtctttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cataaaggtttaattggtttcattcaagattatattttaaattgtattggttgtctttgg 60


Query: 61 tttgatagagctgaatcaaaagatagattattagttgcacaacaaatttcaaaacatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgatagagctgaatcaaaagatagattattagttgcacaacaaatttcaaaacatatt 120


Query: 121 gaaaacgaaaataatgacccattattaattttcccagaaggtgtatgtgttaataatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaaacgaaaataatgacccattattaattttcccagaaggtgtatgtgttaataatcaa 180


Query: 181 tattgtgttatgtttaaaaaaggtgcatttgaattaccaaatgttattatctatccagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tattgtgttatgtttaaaaaaggtgcatttgaattaccaaatgttattatctatccagtt 240


Query: 241 gcaatcaaatataatacattatttgttgatgcattttggaattcaaagaaacaatcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaatcaaatataatacattatttgttgatgcattttggaattcaaagaaacaatcattt 300


Query: 301 attagacatatgtttaatttaatgacatcatgggcatttgtttgtgatgtttggtattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attagacatatgtttaatttaatgacatcatgggcatttgtttgtgatgtttggtattta 360


Query: 361 gaaccacaaacaattagagaaggtgaaacagcaacacaatttgctaatcgtgttaaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaaccacaaacaattagagaaggtgaaacagcaacacaatttgctaatcgtgttaaagca 420


Query: 421 atgattgcaaagaaagctggtatcataaatgtaccatgggatggttatttgaaatacttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgattgcaaagaaagctggtatcataaatgtaccatgggatggttatttgaaatacttt 480


Query: 481 aaaccaggttcaagatttgctgaacataaacaaaagatttttgcttttcgttttaaaaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaaccaggttcaagatttgctgaacataaacaaaagatttttgcttttcgttttaaaaag 540


Query: 541 aaatttgaagaacaattaaataatagtaacaataatattaataatagttttggtagtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatttgaagaacaattaaataatagtaacaataatattaataatagttttggtagtgat 600


Query: 601 gaaaatgaacattgaaaatgatggacaag 629
|||||||||||||||||||||||||||||
Sbjct: 601 gaaaatgaacattgaaaatgatggacaag 629


Score = 170 bits (86), Expect = 2e-42
Identities = 86/86 (100%)
Strand = Plus / Plus


Query: 647 gaatcctcaaatagtagtatcgtaaaaagataataatacttcttcaagtattaaacaaag 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gaatcctcaaatagtagtatcgtaaaaagataataatacttcttcaagtattaaacaaag 706


Query: 707 aaaattggcaaccccaaacgaataac 732
||||||||||||||||||||||||||
Sbjct: 707 aaaattggcaaccccaaacgaataac 732


Score = 38.2 bits (19), Expect = 0.015
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 787 gaaattgtattaaatcaat 805
|||||||||||||||||||
Sbjct: 787 gaaattgtattaaatcaat 805


>Contig-U09342-1 (Contig-U09342-1Q) /CSM_Contig/Contig-U09342-1Q.Seq.d
Length = 1131

Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 557 taaataatagtaacaataatattaataata 586
||||||||||||| ||||||||||||||||
Sbjct: 45 taaataatagtaataataatattaataata 74


>Contig-U13317-1 (Contig-U13317-1Q) /CSM_Contig/Contig-U13317-1Q.Seq.d
Length = 884

Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Plus


Query: 554 aattaaataatagtaacaataatattaataata 586
|||||||||||||||| ||||||| ||||||||
Sbjct: 851 aattaaataatagtaataataataataataata 883


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,266
Number of Sequences: 6905
Number of extensions: 16266
Number of successful extensions: 2512
Number of sequences better than 10.0: 647
length of query: 869
length of database: 5,674,871
effective HSP length: 16
effective length of query: 853
effective length of database: 5,564,391
effective search space: 4746425523
effective search space used: 4746425523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.23
Homology vs DNA
Query= Contig-U04549-1 (Contig-U04549-1Q) /CSM_Contig/Contig-U04549-1Q.Seq.d
(869 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ430933) Dictyostelium discoideum cDNA clone:ddv9f10, 3' e... 1197 0.0 1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 696 0.0 5
(C84247) Dictyostelium discoideum slug cDNA, clone SSB383. 523 e-162 3
(AU071833) Dictyostelium discoideum slug cDNA, clone SSC607. 468 e-127 1
(AU071391) Dictyostelium discoideum slug cDNA, clone SSB383. 468 e-127 1
(AU261810) Dictyostelium discoideum vegetative cDNA clone:VS... 359 e-115 3
(EL369290) CCES5350.b1_L18.ab1 CCE(LMS) endive Cichorium end... 50 1e-18 4
(FE693889) Pv038Cr_M13R_F04.ab1 Phaseolus vulgaris cv Early ... 66 5e-15 2
(FE693890) Pv037C_M13R_G05.ab1 Phaseolus vulgaris cv Early g... 66 5e-15 2
(FE693891) Pv058D_M13R_G11.ab1 Phaseolus vulgaris cv Early g... 66 5e-15 2
(GE602195) CCPX1042.b1_C22.ab1 CCP(UWX) Globe Artichoke Cyna... 50 3e-14 3
(GE591407) CCPW15371.b1_E03.ab1 CCP(UWX) Globe Artichoke Cyn... 50 3e-14 3
(FF401722) MOOFP23TF MOO Vigna unguiculata cDNA 5', mRNA seq... 62 7e-14 2
(FF394770) MOOFP23TR MOO Vigna unguiculata cDNA 3', mRNA seq... 62 7e-14 2
(FG932158) UCRVU09_CCNT11741_g1 Cowpea UCR 707 Mixed Tissue ... 62 7e-14 2
(FG933682) UCRVU09_CCNT12654_g1 Cowpea UCR 707 Mixed Tissue ... 62 7e-14 2
(FG907008) UCRVU08_CCNS4896_g1 Cowpea IT97K-461-4 Mixed Tiss... 62 7e-14 2
(BQ168571) WHE2459_D12_G23ZT Triticum monococcum early repro... 52 1e-12 5
(BJ320708) Triticum aestivum cDNA clone:whyf16f12, 3' end, s... 52 1e-12 5
(CD863362) AZO1.106I16F010130 AZO1 Triticum aestivum cDNA cl... 52 2e-12 5
(BJ285061) Triticum aestivum cDNA clone:whr6h14, 3' end, sin... 52 2e-12 5
(CJ942780) Triticum aestivum cDNA clone:whchan5g21, 3' end. 52 2e-12 5
(CJ549129) Triticum aestivum cDNA clone rwhgc8f15 3', Y.Ogih... 52 2e-12 5
(EH726225) CNMM12656.b1_P20.ab1 CNM(LMS) spotted knapweed Ce... 50 2e-12 3
(CJ966947) Triticum aestivum cDNA clone:whchul5n02, 3' end. 52 2e-12 5
(CJ930511) Triticum aestivum cDNA clone:whchan5g21, 5' end. 52 2e-12 5
(CJ957426) Triticum aestivum cDNA clone:whchul14c20, 3' end. 52 2e-12 5
(CJ957128) Triticum aestivum cDNA clone:whchul13c20, 3' end. 52 2e-12 5
(EG392932) BG01043B1H04.r1 BG01 - normalized library Leymus ... 52 2e-12 5
(CJ958029) Triticum aestivum cDNA clone:whchul16c20, 3' end. 52 3e-12 5
(CJ958334) Triticum aestivum cDNA clone:whchul17c20, 3' end. 52 3e-12 5
(CJ573880) Triticum aestivum cDNA clone rwhok20f18 3', Y.Ogi... 52 3e-12 5
(EH697079) CCIM8896.b1_O15.ab1 CCI(LMS) chicory Cichorium in... 50 3e-12 3
(CJ572985) Triticum aestivum cDNA clone rwhok17o08 3', Y.Ogi... 52 3e-12 5
(EU391594) Ricinus communis putative lysophosphatidic acid a... 54 4e-12 2
(EI913516) VUH2-36L24TV VUUBBa (VUH2) Vigna unguiculata geno... 62 4e-12 2
(FD490550) Ltu01b_62_C02_C012.b1 Liriodendron Flower Bud Lib... 58 6e-12 3
(EA154132) Sequence 18447 from patent US 7214786. 52 5e-11 5
(FD750119) Afi04_58_A02_C014.b1 Aristolochia fimbriata flowe... 48 9e-11 3
(AU292458) Zinnia elegans cDNA, clone:Z7212, primer:M13 forw... 50 1e-10 3
(CD663079) UCRHV18_04ba11_b1 Drought-stressed Dicktoo barley... 44 1e-10 4
(BJ315224) Triticum aestivum cDNA clone:whyf16f12, 5' end, s... 52 1e-10 4
(FD519336) RUS38H03w HB (Hordeum vulgare cv. Barke) Hordeum ... 44 1e-10 4
(BJ266339) Triticum aestivum cDNA clone:whh26b21, 3' end, si... 52 2e-10 4
(CJ885603) Triticum aestivum cDNA clone:whthls13f03, 3' end. 52 5e-10 4
(CJ834616) Triticum aestivum cDNA clone:whatlal6d10, 5' end. 52 5e-10 4
(CD875676) AZO3.107A08F011008 AZO3 Triticum aestivum cDNA cl... 52 6e-10 4
(CJ861041) Triticum aestivum cDNA clone:whsctal13a06, 3' end. 52 6e-10 4
(CJ847375) Triticum aestivum cDNA clone:whatlal6d10, 3' end. 52 7e-10 4
(FE232548) CAPG1808.rev CAPG Naegleria gruberi amoeba stage ... 58 9e-10 2
(CJ625700) Triticum aestivum cDNA clone rwhvs5a20 3', Y.Ogih... 52 1e-09 4
(AR637741) Sequence 33 from patent US 6855863. 48 1e-09 3
(AM696013) Vigna radiata EST, clone MBB006. 48 1e-09 3
(CX630002) GW001B24r GW Hordeum vulgare cDNA clone GW001B24 ... 44 1e-09 3
(CV057355) BNEL26h4 Barley EST endosperm library Hordeum vul... 44 1e-09 3
(AV916411) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 44 1e-09 3
(AR637727) Sequence 5 from patent US 6855863. 52 2e-09 4
(EI447402) PV_GBa0045J09.r PV_GBa Phaseolus vulgaris genomic... 66 3e-09 2
(GO031585) LJNA234TF JCVI-LJ3 Lotus japonicus cDNA 5', mRNA ... 54 3e-09 2
(GO037711) LJNA234TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA ... 54 3e-09 2
(GO025441) LJMC193TFB JCVI-LJ2 Lotus japonicus cDNA 5', mRNA... 54 3e-09 2
(GO042033) LJNA234TR JCVI-LJ3 Lotus japonicus cDNA 3', mRNA ... 54 3e-09 2
(CO455005) MZCCL10210E09.g Maize Endosperm cDNA Library Zea ... 46 1e-08 3
(CB655669) OSJNEc09E20.r OSJNEc Oryza sativa Japonica Group ... 46 1e-08 2
(BM814500) EST592594 BNIR Medicago truncatula/Meloidogyne in... 54 1e-08 2
(BI309625) EST531035 GPOD Medicago truncatula cDNA clone pGP... 54 1e-08 2
(CC715636) OGVFB26TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 2e-08 3
(CO522036) 3530_1_145_1_D10.x_1 3530 - Full length cDNA libr... 46 3e-08 3
(DV866673) CRP6405 Creeping bentgrass EST Agrostis stolonife... 46 4e-08 3
(CD885226) G100R.001D03F010209 G100R Triticum aestivum cDNA ... 52 5e-08 3
(BT063538) Zea mays full-length cDNA clone ZM_BFc0074M12 mRN... 46 5e-08 2
(AR637740) Sequence 31 from patent US 6855863. 46 5e-08 2
(CJ912869) Triticum aestivum cDNA clone:whthkles24f19, 3' end. 52 5e-08 3
(EE021143) ZM_BFc0074M12.f ZM_BFc Zea mays cDNA clone ZM_BFc... 46 5e-08 2
(EB705908) ZM_BFb0352C18.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 5e-08 2
(DN210071) MEST896_D05.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 46 5e-08 2
(FL449174) 25279251 CERES-503 Zea mays cDNA clone 1539463 3'... 46 5e-08 2
(CJ886729) Triticum aestivum cDNA clone:whthls17g10, 3' end. 52 5e-08 2
(BJ254392) Triticum aestivum cDNA clone:whf5h22, 3' end, sin... 52 5e-08 2
(EF576568) Oryza sativa (indica cultivar-group) clone OSS-48... 46 5e-08 2
(CL990317) ZMMBHe0007p21.r ZMMBHe Zea mays genomic clone ZMM... 46 6e-08 3
(AY107755) Zea mays PCO092229 mRNA sequence. 46 1e-07 3
(CD972009) QAE16h11.yg QAE Zea mays cDNA clone QAE16h11, mRN... 44 2e-07 2
(CD971931) QAE15g10.yg QAE Zea mays cDNA clone QAE15g10, mRN... 44 2e-07 2
(CN775876) tae78e06.x1 Hydra EST Darmstadt I Hydra magnipapi... 44 2e-07 3
(CN631314) taf53h07.y1 Hydra EST Darmstadt I Hydra magnipapi... 44 3e-07 3
(CV182038) tai82f06.x1 Hydra EST UCI 5 ALP Hydra magnipapill... 44 3e-07 3
(EH729110) CNMM15552.b1_P23.ab1 CNM(LMS) spotted knapweed Ce... 50 4e-07 3
(CV465635) taj32h05.x1 Hydra EST UCI 5 ALP Hydra magnipapill... 44 4e-07 3
(FK010493) GLQA996TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 54 7e-07 2
(DN208471) MEST869_D11.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mRN... 46 7e-07 2
(FL070603) 1101531 CERES-197 Zea mays cDNA clone 220208 3', ... 46 7e-07 2
(AW598728) sj46b11.y1 Gm-c1033 Glycine max cDNA clone GENOME... 54 7e-07 2
(CF964465) 11871rsiced_5616.y1 Oryza sativa cv. LYP9 trefoil... 46 7e-07 2
(CD971663) QAE12a05.yg QAE Zea mays cDNA clone QAE12a05, mRN... 44 7e-07 2
(FF510743) G709P532RH11.T0 Acorn worm normalized neurula pEx... 38 1e-06 3
(AM731663) Cucumis melo subsp. melo EST, clone CI_49-A09-M13R. 38 1e-06 4
(FF631399) G825P548FB11.T0 Acorn worm normalized gastrula pE... 38 1e-06 3
(EL901621) CGF2003322_E07 WRO-02: Walnut root Juglans hinds... 46 2e-06 3
(EL514207) CHUZ596.b1_G06.ab1 CHU(XYZ) puzzle sunflower Heli... 46 2e-06 2
(GD361528) 454PCEP0071685 Scarlet Runner Bean globular-stage... 66 2e-06 1
(AR637739) Sequence 29 from patent US 6855863. 46 3e-06 2
(AK067845) Oryza sativa Japonica Group cDNA clone:J013124G01... 46 3e-06 2
(CB632500) OSIIEb10M12.r OSIIEb Oryza sativa Indica Group cD... 46 3e-06 2
(EL424084) CHCM3682.b1_C10.ab1 CHC(LMS) Texas blueweed Helia... 50 3e-06 2
(CB652369) OSJNEc02D06.r OSJNEc Oryza sativa Japonica Group ... 46 3e-06 2
(CB632499) OSIIEb10M12.f OSIIEb Oryza sativa Indica Group cD... 46 3e-06 2
(CB656281) OSJNEc10H06.r OSJNEc Oryza sativa Japonica Group ... 46 3e-06 2
(CB646943) OSJNEb09K13.r OSJNEb Oryza sativa Japonica Group ... 46 3e-06 2
(GE512467) CCFT8493.g1_I11.ab1 CCF(STU) sunflower Helianthus... 50 3e-06 2
(CI139553) Oryza sativa Japonica Group cDNA, clone: 027-M099... 46 3e-06 2
(EG712062) Os5MPREST3518 Rice young panicles Oryza sativa Ja... 46 3e-06 2
(CK066564) 72881rsicem_5690.y1 Oryza sativa cv. PA64s panicl... 46 3e-06 2
(DV458382) CV02027A1F04.f1 CV02-normalized library Manihot e... 46 3e-06 2
(CX111515) EI062B19 A normalized whole-life-cycle cDNA libra... 46 3e-06 2
(EL427591) CHCM6939.b1_E07.ab1 CHC(LMS) Texas blueweed Helia... 52 3e-06 2
(CL996878) ZMMBHf0009m08.f ZMMBHf Zea mays genomic clone ZMM... 46 4e-06 2
(DR557754) WS02612.B21_C05 WS-PP-N-A-12 Picea glauca cDNA cl... 52 7e-06 3
(DR566273) WS0266.B21_J12 WS-PP-N-A-12 Picea glauca cDNA clo... 52 7e-06 3
(DR472576) WS00956.B21_J09 IS-B-N-A-10 Picea engelmannii x P... 52 8e-06 3
(CO479990) GQ01815.T24_B10 GQ018: Clean ROOTS systems - N tr... 52 8e-06 3
(CO226400) WS01029.B21_I21 SS-R-N-A-11 Picea sitchensis cDNA... 52 8e-06 3
(DR570088) WS00724.B21_E20 WS-PS-N-A-8 Picea glauca cDNA clo... 52 8e-06 3
(BP891854) Solanum lycopersicum cDNA, clone: FB08CB02, 5' en... 38 9e-06 3
(AR637738) Sequence 27 from patent US 6855863. 46 1e-05 2
(AY104024) Zea mays PCO092230 mRNA sequence. 46 1e-05 2
(BT054898) Zea mays full-length cDNA clone ZM_BFc0140I19 mRN... 46 1e-05 2
(EU961249) Zea mays clone 233819 1-acyl-sn-glycerol-3-phosph... 46 1e-05 2
(AW036105) EST278191 tomato seed, TAMU Solanum lycopersicum ... 38 1e-05 3
(AR637725) Sequence 1 from patent US 6855863. 46 1e-05 2
(EH724957) CNMM11385.b1_A16.ab1 CNM(LMS) spotted knapweed Ce... 50 1e-05 2
(DR799708) ZM_BFb0022M06.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(BG321107) Zm04_02a06_A Zm04_AAFC_ECORC_cold_stressed_maize_... 46 1e-05 2
(DV515836) ZM_BFb0198J11.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(EE646897) CHEM7065.b1_B15.ab1 CHE(LMS) serpentine sunflower... 48 1e-05 2
(CO467007) MZCCL20044H12.g Maize Endosperm cDNA Library Zea ... 46 1e-05 2
(DV517017) ZM_BFb0200G05.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(DV167977) ZM_BFb0166G03.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(DR961475) ZM_BFb0077P08.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(BQ463999) HF01B04T HF Hordeum vulgare subsp. vulgare cDNA c... 44 1e-05 2
(EB401601) ZM_BFb0307M06.f ZM_BFb Zea mays cDNA 3', mRNA seq... 44 1e-05 2
(EB405520) ZM_BFb0315K10.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(DY234684) ZM_BFb0244P01.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(DN232412) MEST1112_A12.T7-1 UGA-ZmSAM-XZ2 Zea mays cDNA, mR... 46 1e-05 2
(CB866956) HC05I03w CH Hordeum vulgare cDNA clone HC05I03 5-... 44 1e-05 2
(BG550249) 947038H04.x1 947 - 2 week shoot from Barkan lab Z... 46 1e-05 2
(EB675282) ZM_BFb0338E14.f ZM_BFb Zea mays cDNA 3', mRNA seq... 46 1e-05 2
(BJ486254) Hordeum vulgare subsp. spontaneum strain H602 cDN... 44 1e-05 2
(FL480981) 1455437 CERES-197 Zea mays cDNA clone 233819 3', ... 46 1e-05 2
(DV491464) 1000036-H12.T7-1 UGI-Reseq Zea mays cDNA, mRNA se... 46 1e-05 2
(BJ465370) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 44 1e-05 2
(EL490058) CHUS5168.b1_P19.ab1 CHU(LMS) puzzle sunflower Hel... 48 1e-05 2
(AW052970) 614077B10.x3 614 - root cDNA library from Walbot ... 46 1e-05 2
(BJ468613) Hordeum vulgare subsp. vulgare cv.Haruna Nijo cDN... 44 1e-05 2
(FL031866) 3498279 CERES-264 Zea mays cDNA clone 688713 5', ... 46 1e-05 2
(CV838067) ID0ACC6DG01RM1 ID0ACC Acyrthosiphon pisum cDNA cl... 52 1e-05 2
(CV834320) ID0ACC25BC09RM1 ID0ACC Acyrthosiphon pisum cDNA c... 52 1e-05 2
(BD224735) Novel plant acyltransferases. 46 1e-05 2
(AW648173) EST326627 tomato germinating seedlings, TAMU Sola... 38 1e-05 3
(DX920440) rGB-SNP_Gs_Grai-LR-121a-C13 rGB-SNP_Gs Gossypium ... 44 1e-05 2
(AW036104) EST278190 tomato seed, TAMU Solanum lycopersicum ... 38 1e-05 3
(AP008029) Lotus japonicus genomic DNA, chromosome 6, clone:... 54 1e-05 2
(AC159873) Medicago truncatula chromosome 8 clone mth2-46p15... 54 2e-05 5
(FG114631) PRAG-aab77a02.g1 Sand_fly_EST_Normalized Phleboto... 54 2e-05 2
(DY659711) SC_CP_08_D03 SC_CP Senecio cambrensis cDNA 5', mR... 38 2e-05 3
(EX929454) ll25b07.g7 Cycas ovule - normalized (NYBG) Cycas ... 46 3e-05 2
(BQ874277) QGI4O04.yg.ab1 QG_ABCDI lettuce salinas Lactuca s... 46 4e-05 2
(AU303493) Zinnia elegans cDNA, clone:Z12320. 62 4e-05 1
(DB984091) Glycine max cDNA, clone: GMFL02-32-I10, 3'end. 62 4e-05 1
(GE512466) CCFT8493.b1_I11.ab1 CCF(STU) sunflower Helianthus... 50 4e-05 2
(FK002978) GLPAV29TR JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 4e-05 2
(FK001029) GLPAK14TR JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 48 4e-05 2
(DY964296) CLSM1485.b1_J12.ab1 CLS(LMS) lettuce sativa Lactu... 46 5e-05 2
(BT013293) Lycopersicon esculentum clone 134908R, mRNA seque... 38 7e-05 3
(FF560256) MUSRA41TF MUSR Musa acuminata cDNA 5', mRNA seque... 46 1e-04 2
(FL986533) CCHY18926.b1 CCHY Panicum virgatum callus (N) Pan... 42 1e-04 2
(GD005190) CCHY29276.b1 CCHY Panicum virgatum callus (N) Pan... 42 1e-04 2
(BG817923) ESSU0345 S.scabiei cDNA library Sarcoptes scabiei... 40 1e-04 2
(FL986534) CCHY18926.g1 CCHY Panicum virgatum callus (N) Pan... 42 1e-04 2
(AC212226) Zea mays chromosome 9 clone CH201-91M17; ZMMBBc00... 60 1e-04 1
(AC209641) Zea mays chromosome 6 clone CH201-380K18; ZMMBBc0... 60 1e-04 1
(EI282058) OR__Ba0096E23.f OR__Ba Oryza rufipogon genomic cl... 46 2e-04 2
(DX919823) rGB-SNP_Ga_Grai-LR-121a-C13 rGB-SNP_Ga Gossypium ... 42 2e-04 2
(CW522093) OP__Ba0032K01.f OP__Ba Oryza punctata genomic clo... 46 2e-04 2
(CC341836) OGRAD15TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 3e-04 2
(EB154582) 030107ABMA004925HT (ABMA) M9 phloem Malus x domes... 44 4e-04 2
(ES732430) Nad03b_40_F06_C005.b1 Nuphar advena flower bud li... 50 4e-04 2
(AC196261) Zea mays chromosome 7 clone CH201-479B22; ZMMBBc0... 46 5e-04 4
(DR569371) WS02624.BR_I05 WS-PP-N-A-12 Picea glauca cDNA clo... 52 5e-04 2
(DR562266) WS02624.C21.1_I05 WS-PP-N-A-12 Picea glauca cDNA ... 52 5e-04 2
(CO227621) WS0012.B21_D14 WS-ES-A-1 Picea glauca cDNA clone ... 52 5e-04 2
(EE620894) CHWM8047.b1_N20.ab1 CHW(LMS) silverleaf sunflower... 42 6e-04 2
(AI729376) BNLGHi13223 Six-day Cotton fiber Gossypium hirsut... 42 6e-04 2
(CI016642) Oryza sativa Japonica Group cDNA, clone: 007-M021... 46 6e-04 2
(CI176934) Oryza sativa Japonica Group cDNA, clone: 034-M029... 46 6e-04 2
(GE513763) CCFT9114.g1_C24.ab1 CCF(STU) sunflower Helianthus... 44 6e-04 2
(BZ668847) PUBGO45TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 46 6e-04 2
(CG224445) OGWKK92TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 6e-04 2
(DY915069) CHAY10963.b1_E06.ab1 CHA(XYZ) common wild sunflow... 44 6e-04 2
(CC348179) OGPBB54TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 46 6e-04 2
(EL446578) CHTM2539.b1_E12.ab1 CHT(LMS) Jerusalem artichoke ... 44 7e-04 2
(DT702777) s13dFA24E02RT019_85295 Tall fescue, Festuca arund... 38 7e-04 3
(CJ756583) Ipomoea nil cDNA clone:jmsf12m23, 3' end. 38 0.001 3
(CJ767017) Ipomoea nil cDNA clone:jmsf48p02, 3' end. 38 0.001 3
(EX418216) GQ03709.B7_O12 GQ037 - Shoot tip - Dormant Picea ... 44 0.001 3
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 44 0.001 12
(BG354560) 947038H04.y1 947 - 2 week shoot from Barkan lab Z... 46 0.001 2
(AU086536) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 52 0.001 2
(EY412291) pOP-EO07397_EST_C_1_pSK_SK EO (Oil Palm Embryoid)... 42 0.002 2
(EI270240) OR__Ba0079M07.r OR__Ba Oryza rufipogon genomic cl... 42 0.002 2
(FG289637) 1108793304462 New World Screwworm Egg 9261 ESTs C... 46 0.002 2
(AZ540964) ENTEB65TF Entamoeba histolytica Sheared DNA Entam... 38 0.002 2
(FL797249) CCGG1242.g1 CCGG Panicum virgatum late flowering ... 38 0.002 2
(FL899071) CCGN14323.b1 CCGN Panicum virgatum etiolated seed... 38 0.002 2
(FL899072) CCGN14323.g1 CCGN Panicum virgatum etiolated seed... 38 0.002 2
(FE627651) CBYY7422.g1 CBYY Panicum virgatum Kanlow crown Pa... 38 0.002 2
(FL860523) CCGI6414.g1 CCGI Panicum virgatum etiolated seedl... 38 0.002 2
(GD010961) CCHZ4057.g1 CCHZ Panicum virgatum abiotic and bio... 38 0.002 2
(DV483351) 5384_E06_I12Z_040 Brachypodium distachyon leaf ES... 38 0.002 2
(FL757501) CCGC7737.b1 CCGC Panicum virgatum early floral bu... 38 0.002 2
(DT692494) s13dFA09A09HS069_359111 Tall fescue, Festuca arun... 38 0.002 2
(GD011502) CCHZ4340.g1 CCHZ Panicum virgatum abiotic and bio... 38 0.002 2
(GD011501) CCHZ4340.b1 CCHZ Panicum virgatum abiotic and bio... 38 0.002 2
(FL807676) CCGG6765.g1 CCGG Panicum virgatum late flowering ... 38 0.002 2
(DN151228) 5221_H09_O17 Switchgrass callus cDNA library Pani... 38 0.002 2
(CU855690) Zebrafish DNA sequence from clone CH73-211K12 in ... 56 0.002 1
(BX072555) Zebrafish DNA sequence from clone DKEY-30O19 in l... 56 0.002 1
(CU928472) S.lycopersicum DNA sequence from clone SL_MboI-13... 56 0.002 1
(CU915745) S.lycopersicum DNA sequence *** SEQUENCING IN PRO... 56 0.002 1
(AU073098) Dictyostelium discoideum slug cDNA, clone SSG130. 56 0.002 1
(BJ446742) Dictyostelium discoideum cDNA clone:ddv63o17, 3' ... 56 0.002 1
(BJ442076) Dictyostelium discoideum cDNA clone:ddv48d19, 3' ... 56 0.002 1
(BJ439559) Dictyostelium discoideum cDNA clone:ddv40i19, 3' ... 56 0.002 1
(BJ355468) Dictyostelium discoideum cDNA clone:dda57n06, 3' ... 56 0.002 1
(EX423395) GQ03805.B7_C10 GQ038 - Stem - Active growth Picea... 52 0.002 2
(CF574037) MCSA079C07 Maturing Sugarcane Stem Lambda ZIPLOX ... 46 0.002 3
(BG593837) EST492515 cSTS Solanum tuberosum cDNA clone cSTS5... 38 0.003 3
(EA699684) Sequence 78563 from patent US 7365185. 46 0.004 2
(DR172291) HF0003_M18:A Triphysaria versicolor (parasitic pl... 46 0.005 2
(EY003921) CBAH432.b1:P T. versicolor peonidin treated rever... 46 0.005 2
(CJ853092) Triticum aestivum cDNA clone:whsctal27o07, 5' end. 52 0.005 2
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 44 0.006 6
(CJ866075) Triticum aestivum cDNA clone:whsctal27o07, 3' end. 52 0.007 2
(BG314125) WHE2459_D12_G23ZS Triticum monococcum early repro... 52 0.007 2
(CD875677) AZO3.107A08R011126 AZO3 Triticum aestivum cDNA cl... 52 0.007 2
(EY135085) CBTH478.b1_K23.ab1:P Triphysaria pusilla root tip... 46 0.007 2
(EY183093) CBTI8923.b2_E23.ab1:P Triphysaria pusilla root ti... 46 0.008 2
(EY176694) CBTI5657.g1_A24.ab1:P Triphysaria pusilla root ti... 46 0.008 2
(EY135086) CBTH478.g1_K23.ab1:P Triphysaria pusilla root tip... 46 0.008 2
(EL354181) CCEM10844.b1_G23.ab1 CCE(LMS) endive Cichorium en... 40 0.008 2
(CO095387) GR__Ea17P22.f GR__Ea Gossypium raimondii cDNA clo... 38 0.008 2
(CN632438) taf17f08.y1 Hydra EST Darmstadt I Hydra magnipapi... 38 0.008 2
(AI895735) EST265178 tomato callus, TAMU Solanum lycopersicu... 38 0.008 2
(EY180316) CBTI7308.g1_G03.ab1:P Triphysaria pusilla root ti... 46 0.008 2
(EH183437) EC01_d_10 EC01 Eragrostis curvula cDNA, mRNA sequ... 46 0.008 2
(CD971989) QAE16f08.yg QAE Zea mays cDNA clone QAE16f08, mRN... 44 0.008 2
(BX255922) Zebrafish DNA sequence from clone CH211-125A15 in... 54 0.009 1
(BX255893) Zebrafish DNA sequence from clone CH211-272H10 in... 54 0.009 1
(BX004881) Zebrafish DNA sequence from clone CH211-141M16 in... 54 0.009 1
(AC106374) Rattus norvegicus 4 BAC CH230-112C2 (Children's H... 54 0.009 1
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 54 0.009 1
(AC117128) Rattus norvegicus clone CH230-230O8, *** SEQUENCI... 54 0.009 1
(AC200088) Macaca mulatta clone CH250-229N21, WORKING DRAFT ... 54 0.009 1
(AC176978) Strongylocentrotus purpuratus clone R3-36F12, WOR... 54 0.009 1
(EI918605) VUH2-54N21TV VUUBBa (VUH2) Vigna unguiculata geno... 54 0.009 1
(BM273574) PfESToaa52g04.y1 Plasmodium falciparum 3D7 gameto... 54 0.009 1
(BB913582) Trifolium pratense cDNA clone:RCE13005. 54 0.009 1
(EY213205) PRAG-aaa82h02.g1 Sand_fly_EST_Normalized Phleboto... 54 0.009 1
(AP004674) Oryza sativa Japonica Group genomic DNA, chromoso... 46 0.011 4
(BX571670) Zebrafish DNA sequence from clone DKEY-153J7 in l... 48 0.012 3
(AP003953) Oryza sativa Japonica Group genomic DNA, chromoso... 46 0.013 3
(CU570896) Zebrafish DNA sequence from clone DKEY-194E13 in ... 42 0.017 6
(DR173831) HF0011_H03:A Triphysaria versicolor (parasitic pl... 44 0.019 2
(EY003922) CBAH432.g1:P T. versicolor peonidin treated rever... 44 0.019 2
(AP009396) Solanum lycopersicum genomic DNA, chromosome 8, c... 38 0.020 5
(AM427912) Vitis vinifera contig VV78X171735.11, whole genom... 50 0.021 4
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 46 0.023 2
(CU393486) Mouse DNA sequence from clone CH29-44K18 on chrom... 36 0.023 2
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 40 0.023 2
(AL596086) Mouse DNA sequence from clone RP23-168C20 on chro... 36 0.023 2
(AC174607) Solanum lycopersicum, complete sequence. 38 0.024 2
(CR749745) Zebrafish DNA sequence from clone DKEY-7O20 in li... 40 0.024 2
(CL589903) OB__Ba0092P20.r OB__Ba Oryza brachyantha genomic ... 38 0.025 2
(DT516413) WS02431.B21_E23 PTxD-ICC-N-A-14 Populus trichocar... 38 0.029 2
(AC207266) Zea mays chromosome 9 clone CH201-225N4; ZMMBBc02... 46 0.029 3
(DT489757) WS02543.B21_B14 PT-MB-N-A-15 Populus trichocarpa ... 38 0.029 2
(CV244867) WS0255.B21_N12 PT-MB-N-A-15 Populus trichocarpa c... 38 0.029 2
(FI283868) AdH1033-CPY2-L4TF AdH1 Arachis duranensis genomic... 38 0.030 2
(CV240421) WS0251.B21_F09 PT-MB-N-A-15 Populus trichocarpa c... 38 0.030 2
(EL502119) A11_PFLAB1-M-PLATE20BR.AB1 Blood stage Plasmodium... 40 0.030 2
(BU814884) N034E07 Populus bark cDNA library Populus tremula... 38 0.030 2
(DT485321) WS02527.B21_O08 PT-MB-N-A-15 Populus trichocarpa ... 38 0.030 2
(DB898555) Populus nigra mRNA, clone: PnFL2-033_H12, 3'end. 38 0.030 2
(CX173922) G07_69-52_13.ab1 leaf inoculated with Marssonia p... 38 0.030 2
(AM715159) Cucumis melo subsp. agrestis EST, clone AI_35-E09... 38 0.030 2
(BU894063) X001F10 Populus wood cDNA library Populus tremula... 38 0.030 2
(CV271762) WS0155.B21_J21 PTxN-IB-A-6 Populus trichocarpa x ... 38 0.030 2
(AU088436) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 40 0.030 2
(BU861817) S007B09 Populus imbibed seed cDNA library Populus... 38 0.030 2
(BE439226) CDO770_WHE03D07R ITEC CDO Oat cDNA Library Avena ... 46 0.034 2
(CU570788) Zebrafish DNA sequence from clone CH73-299H12 in ... 52 0.036 1
(BX510656) Zebrafish DNA sequence from clone CH211-132N7 in ... 52 0.036 1
(BX088644) Zebrafish DNA sequence from clone CH211-157L15 in... 52 0.036 1
(AL831742) Mouse DNA sequence from clone RP23-11F9 on chromo... 52 0.036 1
(EF457754) Gossypium hirsutum putative calcium-binding prote... 52 0.036 1
(AL034559) Plasmodium falciparum MAL3P7. 52 0.036 1
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3... 52 0.036 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 52 0.036 1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 52 0.036 1
(AC155559) Zea mays strain B73 clone ZMMBBc0170A07, *** SEQU... 52 0.036 1
(AC147809) Zea mays clone ZMMBBb0356C09, *** SEQUENCING IN P... 52 0.036 1
(AC109405) Rattus norvegicus clone CH230-265G13, *** SEQUENC... 52 0.036 1
(AC098162) Rattus norvegicus clone CH230-30I4, *** SEQUENCIN... 52 0.036 1
(CU856177) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.036 1
(AC079567) Mus musculus clone RP23-63L14, WORKING DRAFT SEQU... 52 0.036 1
(AC079566) Mus musculus clone RP23-60K21, WORKING DRAFT SEQU... 52 0.036 1
(AL844507) Plasmodium falciparum chromosome 8. 52 0.036 1
(AC218153) Zea mays chromosome 7 clone ZMMBBb-377K21; ZMMBBb... 52 0.036 1
(AC217649) Zea mays chromosome 2 clone ZMMBBb-152M9; ZMMBBb0... 52 0.036 1
(AC207264) Zea mays chromosome 6 clone CH201-24A21; ZMMBBc00... 52 0.036 1
(AC207071) Zea mays chromosome 2 clone CH201-507M17; ZMMBBc0... 52 0.036 1
(AC205826) Zea mays chromosome 6 clone CH201-547J11; ZMMBBc0... 52 0.036 1
(AC198368) Zea mays chromosome 7 clone CH201-262L7; ZMMBBc02... 52 0.036 1
(AC190720) Zea mays chromosome 8 clone CH201-170A7; ZMMBBc01... 52 0.036 1
(AC189741) Zea mays chromosome 6 clone ZMMBBb-566M7; ZMMBBb0... 52 0.036 1
(AC185254) Zea mays chromosome 4 clone CH201-418N20; ZMMBBc0... 52 0.036 1
(AC178848) Strongylocentrotus purpuratus clone R3-29A23, WOR... 52 0.036 1
(CW161302) 104_568_11150342_148_36435_061 Sorghum methylatio... 52 0.036 1
(CG440579) OG5EK26TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 52 0.036 1
(CG258265) OG4AK77TC ZM_0.7_1.5_KB Zea mays genomic clone ZM... 52 0.036 1
(CG204912) PUJDC18TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 52 0.036 1
(CC680770) OGUKO81TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 52 0.036 1
(CC464796) ZMMBBc0384B23f ZMMBBc Zea mays subsp. mays genomi... 52 0.036 1
(CC439979) PUHAW56TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 52 0.036 1
(CC167986) ij78g05.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ... 52 0.036 1
(CC161964) ii80g05.g1 WGS-ZmaysF (DH5a methyl filtered) Zea ... 52 0.036 1
(CC161963) ii80g05.b1 WGS-ZmaysF (DH5a methyl filtered) Zea ... 52 0.036 1
(BX147963) Danio rerio genomic clone DKEY-106J10, genomic su... 52 0.036 1
(BH883877) hw48a01.g1 WGS-ZmaysF (JM107 adapted methyl filte... 52 0.036 1
(EL494118) C05_PFBAMHI-M-T3-PLATE29A.AB1 Blood stage Plasmod... 52 0.036 1
(EL494108) C05_PFBAMHI-M-T3-PLATE10A.AB1 Blood stage Plasmod... 52 0.036 1
(EL493467) B04_PFBAMHI-M-T3-PLATE24A.AB1 Blood stage Plasmod... 52 0.036 1
(EB885650) 9197928 ZF26 Danio rerio cDNA clone 3287635, mRNA... 52 0.036 1
(DW859549) MSAM010890_3738_0699 LCM-dissected maize shoot ap... 52 0.036 1
(AU088092) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 52 0.036 1
(AU072106) Dictyostelium discoideum slug cDNA, clone SSD428. 52 0.036 1
(BQ451541) PfESToab01g11.y1 Plasmodium falciparum 3D7 asexua... 52 0.036 1
(EX851907) CBNC9288.rev CBNC Phycomyces blakesleeanus NRRL15... 52 0.036 1
(EX831905) CBNB3169.fwd CBNB Phycomyces blakesleeanus NRRL15... 52 0.036 1
(EX831904) CBNB3169.rev CBNB Phycomyces blakesleeanus NRRL15... 52 0.036 1
(EX821466) CBNA7595.rev CBNA Phycomyces blakesleeanus NRRL15... 52 0.036 1
(EX819760) CBNA6730.rev CBNA Phycomyces blakesleeanus NRRL15... 52 0.036 1
(EX816015) CBNA4829.rev CBNA Phycomyces blakesleeanus NRRL15... 52 0.036 1
(CU570989) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.038 5
(BX927393) Zebrafish DNA sequence from clone CH211-231B2 in ... 48 0.043 4
(AU054158) Dictyostelium discoideum slug cDNA, clone SLK835. 48 0.044 2
(CA117575) SCBFLR1083E05.g LR1 Saccharum officinarum cDNA cl... 42 0.070 3
(CA246619) SCSGFL5C02G06.g Saccharum officinarum FL5 Sacchar... 46 0.080 2
(DV625830) 96227.1 Cold Sweetening C Solanum tuberosum cDNA ... 38 0.083 2
(DV625377) 95708.1 Cold Sweetening C Solanum tuberosum cDNA ... 38 0.083 2
(AC006279) Plasmodium falciparum chromosome 12 clone PFYAC61... 48 0.084 9
(CT009574) Mouse DNA sequence from clone RP23-140H11 on chro... 40 0.087 2
(BQ588925) E012534-024-014-J02-SP6 MPIZ-ADIS-024-storage roo... 44 0.087 2
(AC119905) Mus musculus chromosome 17, clone RP24-238N14, co... 40 0.087 2
(AC158140) Mus musculus chromosome 8, clone RP24-267F22, com... 40 0.088 2
(CA993988) pGH928 pGH Gossypium hirsutum cDNA 5', mRNA seque... 42 0.089 2
(CA993876) pGH374 pGH Gossypium hirsutum cDNA 5', mRNA seque... 42 0.089 2
(AC100397) Mus musculus clone RP23-134C14, LOW-PASS SEQUENCE... 40 0.092 2
(CN445214) Mdfw2002i14.y1 Mdfw Malus x domestica cDNA clone ... 38 0.092 2
(AC221005) Zea mays chromosome 9 clone CH201-428E2; ZMMBBc04... 46 0.094 2
(CE844570) tigr-gss-dog-17000332716655 Dog Library Canis lup... 42 0.094 2
(CU855945) Zebrafish DNA sequence from clone CH73-377P23 in ... 48 0.095 3
(FL757502) CCGC7737.g1 CCGC Panicum virgatum early floral bu... 38 0.096 2
(GE515240) CCFT9813.g1_I06.ab1 CCF(STU) sunflower Helianthus... 44 0.099 2
(AC189566) Brassica rapa subsp. pekinensis clone KBrH009D02,... 34 0.10 5
(CA281427) SCAGSD1040H09.g SD1 Saccharum officinarum cDNA cl... 46 0.11 2
(CN516754) 5117.1 Tuber Skin Solanum tuberosum cDNA clone 51... 38 0.11 2
(CU182971) Zebrafish DNA sequence from clone CH211-223B10. 48 0.11 3
(AZ996547) 2M0282G16R Mouse 10kb plasmid UUGC2M library Mus ... 40 0.11 2
(BV438061) S237P6322RE8.T0 PortugueseWaterDog Canis familiar... 40 0.11 2
(FK911084) EST_lsal_evj_960985 lsalevj mixed_tissue_mixed_st... 46 0.12 2
(AE014852) Plasmodium falciparum 3D7 chromosome 12, section ... 48 0.12 11
(FK911083) EST_lsal_evj_935641 lsalevj mixed_tissue_mixed_st... 46 0.12 2
(DN940117) 8230.3 After-Cooking Darkening A Solanum tuberosu... 38 0.12 2
(FH066930) CHO_OF3023xg12f1.ab1 CHO_OF3 Nicotiana tabacum ge... 40 0.13 2
(BX537305) Zebrafish DNA sequence from clone DKEY-45L12. 34 0.13 8
(AM465268) Vitis vinifera contig VV78X082096.10, whole genom... 46 0.14 4
(DY885644) CeleSEQ1002 Cunninghamella elegans pBluescript (E... 48 0.14 2
(CU658285) Zebrafish DNA sequence from clone CH73-345H12 in ... 50 0.14 1
(CU041375) Zebrafish DNA sequence from clone CH211-215H6 in ... 50 0.14 1
(CR855996) Zebrafish DNA sequence from clone DKEY-219B24 in ... 50 0.14 1
(BX571675) Zebrafish DNA sequence from clone DKEY-235D17 in ... 50 0.14 1
(BX546489) Zebrafish DNA sequence from clone CH211-258F14 in... 50 0.14 1
(BX465845) Zebrafish DNA sequence from clone DKEY-261A10 in ... 50 0.14 1
(BX255955) Zebrafish DNA sequence from clone CH211-249G22 in... 50 0.14 1
(BX004864) Zebrafish DNA sequence from clone DKEY-117N7 in l... 50 0.14 1
(AL844522) Zebrafish DNA sequence from clone DKEY-113M9. 50 0.14 1
(BX119956) Mouse DNA sequence from clone RP23-301K15 on chro... 50 0.14 1
(AC140472) Mus musculus BAC clone RP24-403L12 from chromosom... 50 0.14 1
(AC133208) Mus musculus BAC clone RP23-17O6 from chromosome ... 50 0.14 1
(AC132608) Mus musculus BAC clone RP23-451E12 from chromosom... 50 0.14 1
(AC102155) Mus musculus chromosome 18, clone RP23-334J12, co... 50 0.14 1
(AC187493) Rhesus macaque BAC clone CH250-74H12 from chromos... 50 0.14 1
(AM464107) Vitis vinifera contig VV78X213815.2, whole genome... 50 0.14 1
(AM270075) Aspergillus niger contig An04c0140, complete genome. 50 0.14 1
(Z98547) Plasmodium falciparum MAL3P3. 50 0.14 1
(Z97348) Plasmodium falciparum MAL3P1. 50 0.14 1
(AY688251) Schistosoma mansoni nuclear receptor 2DBD-beta (2... 50 0.14 1
(AF474339) Dictyostelium discoideum ABC transporter ABCC.7 (... 50 0.14 1
(AB082543) Dictyostelium discoideum forB gene for formin hom... 50 0.14 1
(AC096708) Homo sapiens chromosome 18, clone RP11-861L17, co... 50 0.14 1
(AC133842) Rattus norvegicus clone CH230-185E3, *** SEQUENCI... 50 0.14 1
(AC130580) Rattus norvegicus clone CH230-198B19, WORKING DRA... 50 0.14 1
(AC126292) Rattus norvegicus clone CH230-127A16, WORKING DRA... 50 0.14 1
(CU914423) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.14 1
(CT030147) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.14 1
(AP002421) Homo sapiens genomic DNA, chromosome 18q22 clone:... 50 0.14 1
(AP001402) Homo sapiens genomic DNA, chromosome 18q22 clone:... 50 0.14 1
(AC231007) Bos taurus clone CH240-493M5, WORKING DRAFT SEQUE... 50 0.14 1
(AC213457) Zea mays chromosome 2 clone CH201-390P17; ZMMBBc0... 50 0.14 1
(AC211968) Zea mays chromosome 1 clone CH201-234H12; ZMMBBc0... 50 0.14 1
(AC203823) Zea mays chromosome 2 clone CH201-27G9; ZMMBBc002... 50 0.14 1
(AC199707) Zea mays chromosome 1 clone CH201-27C3; ZMMBBc002... 50 0.14 1
(AC191903) Sorex araneus clone SA_Ba-268O21, WORKING DRAFT S... 50 0.14 1
(AC191497) Sorex araneus clone SA_Ba-307C20, WORKING DRAFT S... 50 0.14 1
(AC190914) Zea mays chromosome 2 clone CH201-528N13; ZMMBBc0... 50 0.14 1
(AC179020) Strongylocentrotus purpuratus clone R3-32M14, WOR... 50 0.14 1
(AC176963) Strongylocentrotus purpuratus clone R3-34K21, WOR... 50 0.14 1
(AC173029) Bos taurus clone CH240-278C4, WORKING DRAFT SEQUE... 50 0.14 1
(AC168715) Strongylocentrotus purpuratus clone R3-3011C10, W... 50 0.14 1
(AY808726) Schistosoma japonicum SJCHGC07607 protein mRNA, p... 50 0.14 1
(FH179445) CHO_OF3414xn24f1.ab1 CHO_OF3 Nicotiana tabacum ge... 50 0.14 1
(EI016623) bb73b03.r Dekkera bruxellensis Random Genomic Lib... 50 0.14 1
(DW012498) w17b7_M13F Myzus persicae, tobacco lineage, whole... 50 0.14 1
(DW011603) w14d7_M13F Myzus persicae, tobacco lineage, whole... 50 0.14 1
(AU060764) Dictyostelium discoideum slug cDNA, clone SLB408. 50 0.14 1
(BU711095) SJAAAIA12 Adult SjC 7/94 Schistosoma japonicum cD... 50 0.14 1
(R41841) yg12b07.s1 Soares infant brain 1NIB Homo sapiens cD... 50 0.14 1
(FE471042) CAOS3243.rev CAOS Selaginella moellendorffii mixe... 50 0.14 1
(EY487900) CBBP16094.fwd CBBP Hirudo medicinalis hermaphrodi... 50 0.14 1
(EY336074) CAWY7454.fwd CAWY Helobdella robusta Subtracted E... 50 0.14 1
(EY328453) CAWY1593.fwd CAWY Helobdella robusta Subtracted E... 50 0.14 1
(CP000743) Methanococcus aeolicus Nankai-3, complete genome. 50 0.14 1
(AM426946) Vitis vinifera contig VV78X024818.1, whole genome... 48 0.16 2
(AM463813) Vitis vinifera, whole genome shotgun sequence, co... 42 0.17 3
(CR759846) Zebrafish DNA sequence from clone DKEYP-79C2 in l... 32 0.18 9
(BX088714) Zebrafish DNA sequence from clone DKEY-16F19 in l... 42 0.18 4
(CR382293) Zebrafish DNA sequence from clone CH211-235M18 in... 42 0.18 5
(CR847981) Zebrafish DNA sequence from clone CH211-195H23 in... 48 0.18 8
(AC234715) Brassica rapa subsp. pekinensis chromosome Linkag... 38 0.18 10
(AY484463) Dictyostelium discoideum kinesin family member 10... 48 0.19 2
(BX538350) Cryptosporidium parvum chromosome 6, complete seq... 34 0.21 9
(BX571763) Zebrafish DNA sequence from clone DKEY-233K3 in l... 46 0.22 5
(AC141709) Apis mellifera clone CH224-56H6, WORKING DRAFT SE... 38 0.22 6
(CR376749) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 44 0.24 6
(BX537141) Zebrafish DNA sequence from clone DKEY-9E8 in lin... 44 0.24 6
(CR382401) Plasmodium falciparum chromosome 6, complete sequ... 38 0.25 10
(BZ359606) id79b04.b1 WGS-ZmaysF (JM107 adapted methyl filte... 44 0.25 2
(FP102277) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.26 4
(AC151711) Medicago truncatula clone mth2-19c1, complete seq... 36 0.26 5
(AC151146) Bos taurus clone CH240-420P8, WORKING DRAFT SEQUE... 42 0.27 3
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 0.28 19
(EL509661) H03_PF-SAU3A-T3-S-P26.AB1 Blood stage Plasmodium ... 44 0.29 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 48 0.29 11
(AC181175) Strongylocentrotus purpuratus clone R3-3039K17, W... 48 0.29 5
(AJ133765) Solanum tuberosum invGE and invGF genes. 40 0.30 2
(CR545462) Zebrafish DNA sequence from clone DKEYP-88F5 in l... 34 0.32 2
(CT033841) Zebrafish DNA sequence from clone RP71-84K24 in l... 36 0.32 2
(BX569788) Zebrafish DNA sequence from clone CH211-161N19 in... 36 0.32 2
(CV502424) 68815.1 Mixed Floral Solanum tuberosum cDNA clone... 36 0.33 2
(BX664721) Zebrafish DNA sequence from clone DKEY-46I9 in li... 36 0.33 2
(BX927183) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 36 0.33 2
(CR933003) Zebrafish DNA sequence from clone DKEY-149P6 in l... 34 0.33 2
(AL627183) Mouse DNA sequence from clone RP23-345H2 on chrom... 40 0.34 6
(BF779833) 3241-35 hindgut and Malpighian tubule cDNA librar... 34 0.34 3
(AU271044) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.34 2
(EG890816) EST_ssal_evf_48636 ssalevf mixed_tissue Salmo sal... 44 0.35 2
(AC210133) Populus trichocarpa clone POP090-D14, complete se... 44 0.35 4
(AC225692) Monodelphis domestica clone VMRC18-924E5, WORKING... 40 0.37 4
(CU464185) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.38 6
(AC115557) Rattus norvegicus clone CH230-112J24, *** SEQUENC... 40 0.41 2
(CC626434) OGUCY52TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 36 0.41 2
(AM478908) Vitis vinifera, whole genome shotgun sequence, co... 44 0.41 2
(GE366773) 292294363 Nasonia vitripennis Male Pupae Nasonia ... 36 0.42 2
(GE380282) 292370058 Nasonia vitripennis Male Pupae Nasonia ... 36 0.42 2
(EA356980) Sequence 29 from patent US 7288385. 48 0.42 2
(EA356961) Sequence 9 from patent US 7288385. 48 0.42 2
(EG823708) EST_ssal_evd_25318 ssalevd thymus Salmo salar cDN... 44 0.42 2
(DR451776) WS00956.BR_J09 IS-B-N-A-10 Picea engelmannii x Pi... 44 0.43 2
(CT510495) A BAC library has been constructed from cultivar ... 46 0.44 2
(DX921714) rGB-SNP_Gt_Grai-LR-121a-C13 rGB-SNP_Gt Gossypium ... 42 0.46 2
(CU076109) Zebrafish DNA sequence from clone DKEY-178O23 in ... 48 0.47 3
(AB082544) Dictyostelium discoideum forC gene for formin hom... 48 0.48 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 46 0.49 9
(AL357772) Human DNA sequence from clone RP11-71E22 on chrom... 42 0.52 5
(BX324151) Zebrafish DNA sequence from clone CH211-62C19 in ... 42 0.53 6
(AL772197) Human DNA sequence from clone RP11-24O6 on chromo... 42 0.55 3
(CR450751) Zebrafish DNA sequence from clone DKEY-61P16 in l... 40 0.56 3
(CU928303) Zebrafish DNA sequence from clone CH73-187I15 in ... 48 0.57 1
(CU914616) Zebrafish DNA sequence from clone CH73-368A23 in ... 48 0.57 1

>(BJ430933) Dictyostelium discoideum cDNA clone:ddv9f10, 3' end,
single read.
Length = 751

Score = 1197 bits (604), Expect = 0.0
Identities = 621/629 (98%)
Strand = Plus / Minus


Query: 1 cataaaggtttaattggtttcattcaagattatattttaaattgtattggttgtctttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 cataaaggtttaattggtttcattcaagattatattttaaattgtattggttgtctttgg 692


Query: 61 tttgatagagctgaatcaaaagatagattattagttgcacaacaaatttcaaaacatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tttgatagagctgaatcaaaagatagattattagttgcacaacaaatttcaaaacatatt 632


Query: 121 gaaaacgaaaataatgacccattattaattttcccagaaggtgtatgtgttaataatcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaaaacgaaaataatgacccattattaattttcccagaaggtgtatgtgttaataatcaa 572


Query: 181 tattgtgttatgtttaaaaaaggtgcatttgaattaccaaatgttattatctatccagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tattgtgttatgtttaaaaaaggtgcatttgaattaccaaatgttattatctatccagtt 512


Query: 241 gcaatcaaatataatacattatttgttgatgcattttggaattcaaagaaacaatcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 gcaatcaaatataatacattatttgttgatgcattttggaattcaaagaaacaatcattt 452


Query: 301 attagacatatgtttaatttaatgacatcatgggcatttgtttgtgatgtttggtattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 attagacatatgtttaatttaatgacatcatgggcatttgtttgtgatgtttggtattta 392


Query: 361 gaaccacaaacaattagagaaggtgaaacagcaacacaatttgctaatcgtgttaaagca 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 391 gaaccacaaacaattagagaaggtgaaacagcaacacnatttgctaatcgtgttaaagca 332


Query: 421 atgattgcaaagaaagctggtatcataaatgtaccatgggatggttatttgaaatacttt 480
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 331 atgatngcaaagaaagctggtatcataaatgnaccatgggatggttatttgaaatacttt 272


Query: 481 aaaccaggttcaagatttgctgaacataaacaaaagatttttgcttttcgttttaaaaag 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 271 aaaccaggttcaagatttgctgaacataaacaaaagatttttgcttctcgttttaaaaag 212


Query: 541 aaatttgaagaacaattaaataatagtaacaataatattaataatagttttggtagtgat 600
|||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 211 aaatttgaagaacaattaaataatagnancaannatattaataatagttttggtagtgat 152


Query: 601 gaaaatgaacattgaaaatgatggacaag 629
|||||||||||||||||||||||||||||
Sbjct: 151 gaaaatgaacattgaaaatgatggacaag 123

Score = 46.1 bits (23), Expect(2) = 7e-07
Identities = 25/26 (96%)
Strand = Plus / Minus


Query: 685 cttcttcaagtattaaacaaagaaaa 710
|||||||||||| |||||||||||||
Sbjct: 67 cttcttcaagtantaaacaaagaaaa 42

Score = 40.1 bits (20), Expect(2) = 7e-07
Identities = 20/20 (100%)
Strand = Plus / Minus


Query: 713 ggcaaccccaaacgaataac 732
||||||||||||||||||||
Sbjct: 40 ggcaaccccaaacgaataac 21

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,075,906,919
Number of extensions: 69655798
Number of successful extensions: 6018727
Number of sequences better than 10.0: 2481
Length of query: 869
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 845
Effective length of database: 99,340,224,878
Effective search space: 83942490021910
Effective search space used: 83942490021910
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.30
Homology vs Protein
Query= Contig-U04549-1 (Contig-U04549-1Q) /CSM_Contig/Contig-U04549-1Q.Seq.d
(869 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AP004674_26(AP004674|pid:none) Oryza sativa Japonica Group genom... 240 5e-62
EF084942_1(EF084942|pid:none) Picea sitchensis clone WS0284_M01 ... 238 2e-61
AK118869_1(AK118869|pid:none) Arabidopsis thaliana At5g60620 mRN... 236 1e-60
AB005246_4(AB005246|pid:none) Arabidopsis thaliana genomic DNA, ... 236 1e-60
AM486287_2(AM486287|pid:none) Vitis vinifera contig VV78X149941.... 236 1e-60
AC159873_1(AC159873|pid:none) Medicago truncatula clone mth2-46p... 236 1e-60
EU391594_1(EU391594|pid:none) Ricinus communis putative lysophos... 234 3e-60
CP000596_128(CP000596|pid:none) Ostreococcus lucimarinus CCE9901... 214 4e-54
CR954217_125(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 214 4e-54
CP001326_527(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 197 4e-49
BT072873_1(BT072873|pid:none) Drosophila melanogaster RE02778 fu... 196 1e-48
BT081355_1(BT081355|pid:none) Drosophila melanogaster MIP03038 f... 196 1e-48
AE013599_4035(AE013599|pid:none) Drosophila melanogaster chromos... 196 1e-48
(Q4V8J4) RecName: Full=Glycerol-3-phosphate acyltransferase 3; ... 189 1e-46
AC006642_3(AC006642|pid:none) Caenorhabditis elegans cosmid F49H... 187 4e-46
BC094146_1(BC094146|pid:none) Xenopus laevis hypothetical protei... 187 4e-46
AC006642_2(AC006642|pid:none) Caenorhabditis elegans cosmid F49H... 187 4e-46
BC072734_1(BC072734|pid:none) Xenopus laevis hypothetical protei... 187 4e-46
AB075872_1(AB075872|pid:none) Homo sapiens mRNA for putative pro... 186 1e-45
AX268073_1(AX268073|pid:none) Sequence 1 from Patent WO0173051. 186 1e-45
BC073136_1(BC073136|pid:none) Homo sapiens 1-acylglycerol-3-phos... 186 1e-45
AK162033_1(AK162033|pid:none) Mus musculus 12 days embryo female... 184 3e-45
BC057860_1(BC057860|pid:none) Mus musculus 1-acylglycerol-3-phos... 184 3e-45
BC167630_1(BC167630|pid:none) Xenopus tropicalis hypothetical pr... 184 3e-45
BC123183_1(BC123183|pid:none) Xenopus laevis lysophosphatidic ac... 184 4e-45
BC146204_1(BC146204|pid:none) Bos taurus 1-acylglycerol-3-phosph... 183 6e-45
(Q5R6J7) RecName: Full=Glycerol-3-phosphate acyltransferase 4; ... 183 6e-45
CR860492_1(CR860492|pid:none) Pongo abelii mRNA; cDNA DKFZp469O1... 183 6e-45
(A3FPG8) RecName: Full=Glycerol-3-phosphate acyltransferase 4; ... 183 6e-45
FJ588001_1(FJ588001|pid:none) Sus scrofa testis spermatogenesis ... 183 7e-45
FJ439669_1(FJ439669|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 183 7e-45
BC115303_1(BC115303|pid:none) Danio rerio zgc:136875, mRNA (cDNA... 182 1e-44
(A3KGT9) RecName: Full=Glycerol-3-phosphate acyltransferase 3-li... 182 2e-44
BX649525_6(BX649525|pid:none) Zebrafish DNA sequence from clone ... 181 4e-44
Z49207_4(Z49207|pid:none) Caenorhabditis elegans Cosmid R07E3, c... 175 2e-42
AK167876_1(AK167876|pid:none) Mus musculus cDNA, RIKEN full-leng... 171 4e-41
AL590449_30(AL590449|pid:none) chromosome X of strain GB-M1 of E... 144 5e-33
BT011163_1(BT011163|pid:none) Drosophila melanogaster AT16061 fu... 140 6e-32
EU131668_1(EU131668|pid:none) Giardia intestinalis 1-acyl-sn-gyl... 139 9e-32
Z50806_5(Z50806|pid:none) Caenorhabditis elegans Cosmid M79, com... 105 2e-21
T23830(T23830)hypothetical protein M79.3 - Caenorhabditis elegans 87 6e-16
AY915067_1(AY915067|pid:none) Schistosoma japonicum SJCHGC02762 ... 70 7e-11
CQ891243_1(CQ891243|pid:none) Sequence 9 from Patent WO2004087902. 61 6e-08
EU969389_1(EU969389|pid:none) Zea mays clone 329615 JD1 mRNA, co... 60 1e-07
BT035973_1(BT035973|pid:none) Zea mays full-length cDNA clone ZM... 59 2e-07
(Q0KHU5) RecName: Full=1-acylglycerophosphocholine O-acyltransfe... 59 3e-07
AE014298_1395(AE014298|pid:none) Drosophila melanogaster chromos... 59 3e-07
AY060832_1(AY060832|pid:none) Drosophila melanogaster GM01605 fu... 59 3e-07
EU962689_1(EU962689|pid:none) Zea mays clone 244751 unknown mRNA. 57 1e-06
CQ891241_1(CQ891241|pid:none) Sequence 7 from Patent WO2004087902. 57 1e-06
(Q502J0) RecName: Full=Lysophosphatidylcholine acyltransferase 2... 55 2e-06
AM484369_1(AM484369|pid:none) Vitis vinifera contig VV78X124949.... 54 5e-06
(Q1LWG4) RecName: Full=Lysophosphatidylcholine acyltransferase 1... 52 3e-05
AX405772_1(AX405772|pid:none) Sequence 187 from Patent WO0222660. 51 6e-05
(Q7L5N7) RecName: Full=Lysophosphatidylcholine acyltransferase 2... 51 6e-05
AC147007_19(AC147007|pid:none) Medicago truncatula clone mth2-26... 50 8e-05
BC066809_1(BC066809|pid:none) Mus musculus lysophosphatidylcholi... 50 1e-04
AB244983_1(AB244983|pid:none) Rattus norvegicus LPCAT1 mRNA for ... 50 1e-04
(Q1HAQ0) RecName: Full=Lysophosphatidylcholine acyltransferase 1... 50 1e-04
(Q6NVG1) RecName: Full=Lysophosphatidylcholine acyltransferase 4... 49 2e-04
BC080829_1(BC080829|pid:none) Mus musculus lysophosphatidylcholi... 49 2e-04
AY084489_1(AY084489|pid:none) Arabidopsis thaliana clone 109415 ... 49 3e-04
AC003680_20(AC003680|pid:none) Arabidopsis thaliana chromosome 2... 48 4e-04
(P0C1Q3) RecName: Full=Lysophosphatidylcholine acyltransferase 2... 47 6e-04
AY128312_1(AY128312|pid:none) Arabidopsis thaliana unknown prote... 47 8e-04
BT045266_1(BT045266|pid:none) Salmo salar clone ssal-rgf-516-359... 47 0.001
BT087539_1(BT087539|pid:none) Zea mays full-length cDNA clone ZM... 47 0.001
(Q8NF37) RecName: Full=Lysophosphatidylcholine acyltransferase 1... 46 0.001
EF677991_1(EF677991|pid:none) Picea sitchensis clone WS02816_C23... 46 0.001
BC144236_1(BC144236|pid:none) Homo sapiens lysophosphatidylcholi... 46 0.001
(Q643R3) RecName: Full=Lysophosphatidylcholine acyltransferase 4... 46 0.001
FJ597488_1(FJ597488|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 46 0.001
BC020166_1(BC020166|pid:none) Homo sapiens lysophosphatidylcholi... 46 0.001
(Q8BYI6) RecName: Full=Lysophosphatidylcholine acyltransferase 2... 46 0.001
AK090444_1(AK090444|pid:none) Homo sapiens mRNA for FLJ00365 pro... 46 0.001
FN357328_2(FN357328|pid:none) Schistosoma mansoni genome sequenc... 46 0.002
FN357328_1(FN357328|pid:none) Schistosoma mansoni genome sequenc... 46 0.002
AY809936_1(AY809936|pid:none) Schistosoma japonicum SJCHGC09609 ... 46 0.002
EU531498_1(EU531498|pid:none) Giardia intestinalis 1-acyl-sn-gly... 45 0.003
AJ720659_1(AJ720659|pid:none) Gallus gallus mRNA for hypothetica... 45 0.003
AX191592_1(AX191592|pid:none) Sequence 114 from Patent WO0149728. 45 0.003
FJ424709_1(FJ424709|pid:none) Sus scrofa 1-acylglycerol-3-phosph... 45 0.004
(Q4V8A1) RecName: Full=Lysophosphatidylcholine acyltransferase 2... 44 0.007
BA000028_869(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 44 0.009
BC135833_1(BC135833|pid:none) Xenopus tropicalis hypothetical pr... 43 0.016
AM181176_833(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 40 0.13
(Q6PBN5) RecName: Full=Ancient ubiquitous protein 1; &BC065447_... 39 0.17
(Q6DCK1) RecName: Full=Lysophosphatidylcholine acyltransferase 4... 39 0.17
AY069249_1(AY069249|pid:none) Drosophila melanogaster GM02347 fu... 39 0.23
AE014134_1585(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.30
BT078737_1(BT078737|pid:none) Lepeophtheirus salmonis Pacific fo... 37 0.87
FM864216_116(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 37 0.87
CP000080_248(CP000080|pid:none) Leishmania major strain Friedlin... 36 1.9
BC007269_1(BC007269|pid:none) Homo sapiens 1-acylglycerol-3-phos... 35 2.5
CP000076_6106(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 35 2.5
AF011374_1(AF011374|pid:none) Homo sapiens lysophosphatidic acid... 35 2.5
CP001581_430(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 35 3.3
CP001016_3524(CP001016|pid:none) Beijerinckia indica subsp. indi... 35 3.3
CP000728_418(CP000728|pid:none) Clostridium botulinum F str. Lan... 35 3.3
BC167406_1(BC167406|pid:none) Xenopus tropicalis hypothetical pr... 35 3.3
CP001083_420(CP001083|pid:none) Clostridium botulinum Ba4 str. 6... 35 3.3
CP000726_390(CP000726|pid:none) Clostridium botulinum A str. ATC... 35 4.3
AM412317_415(AM412317|pid:none) Clostridium botulinum A str. ATC... 35 4.3
AK154707_1(AK154707|pid:none) Mus musculus NOD-derived CD11c +ve... 34 5.6
BC012699_1(BC012699|pid:none) Mus musculus ancient ubiquitous pr... 34 5.6
AM502247_276(AM502247|pid:none) Leishmania infantum chromosome 29. 34 5.6
AK171541_1(AK171541|pid:none) Mus musculus B6-derived CD11 +ve d... 34 5.6
(P70295) RecName: Full=Ancient ubiquitous protein 1; &AK158035_... 34 5.6
BC102888_1(BC102888|pid:none) Bos taurus ancient ubiquitous prot... 34 7.3
CP001022_606(CP001022|pid:none) Exiguobacterium sibiricum 255-15... 34 7.3
Z74822_1(Z74822|pid:none) S.cerevisiae chromosome XV reading fra... 33 9.6
(P19158) RecName: Full=Inhibitory regulator protein IRA2; &RGBY... 33 9.6
M33779_1(M33779|pid:none) S.cerevisiae IRA2 protein gene, comple... 33 9.6

>AP004674_26(AP004674|pid:none) Oryza sativa Japonica Group genomic
DNA, chromosome 7, PAC clone:P0681F05.
&AP008213_1185(AP008213|pid:none)
Length = 370

Score = 240 bits (612), Expect = 5e-62
Identities = 110/184 (59%), Positives = 141/184 (76%)
Frame = +1

Query: 1 HKGLIGFIQDYILNCIGCLWFDRAESKDRLLVAQQISKHIENENNDPLLIFPEGVCVNNQ 180
H G +GFIQ IL +GC+WF+R + KDR +VA+++ H+++ +++PLLIFPEG CVNNQ
Sbjct: 187 HPGWVGFIQKTILESVGCIWFNRNDLKDREVVAKKLRDHVQHPDSNPLLIFPEGTCVNNQ 246

Query: 181 YCVMFKKGAFELPNVIIYPVAIKYNTLFVDAFWNSKKQSFIRHMFNLMTSWAFVCDVWYL 360
Y VMFKKGAFEL + P+AIKYN +FVDAFWNSKKQSF H+ LMTSWA VCDVWYL
Sbjct: 247 YTVMFKKGAFEL-GCAVCPIAIKYNKIFVDAFWNSKKQSFTMHLVRLMTSWAVVCDVWYL 305

Query: 361 EPQTIREGETATQFANRVKAMIAKKAGIINVPWDGYLKYFKPGSRFAEHKQKIFAFRFKK 540
EPQ +R+GETA +FA RV+ MIA +AG+ VPWDGYLK+ +P + E KQ+IFA +
Sbjct: 306 EPQYLRDGETAIEFAERVRDMIAARAGLKKVPWDGYLKHNRPSPKHTEEKQRIFADSVLR 365

Query: 541 KFEE 552
+ EE
Sbjct: 366 RLEE 369

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,003,500,742
Number of extensions: 17233298
Number of successful extensions: 38471
Number of sequences better than 10.0: 113
Number of HSP's gapped: 38411
Number of HSP's successfully gapped: 113
Length of query: 289
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 162
Effective length of database: 646,092,785
Effective search space: 104667031170
Effective search space used: 104667031170
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.88 gvh: 0.52 alm: 0.38 top: 0.30 tms: 0.00 mit: 0.14 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
28.0 %: nuclear
8.0 %: vesicles of secretory system
4.0 %: extracellular, including cell wall
4.0 %: mitochondrial
4.0 %: endoplasmic reticulum

>> prediction for Contig-U04549-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0