| Contig-U04539-1 |
| Contig ID |
Contig-U04539-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
817 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
2210408 |
| End point |
2209703 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
4 |
| Number of EST |
5 |
| Link to clone list |
U04539 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 6.23 |
| Homology vs DNA |
Query= Contig-U04539-1 (Contig-U04539-1Q) /CSM_Contig/Contig-U04539-1Q.Seq.d
(817 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU268748) Dictyostelium discoideum vegetative cDNA clone:VS... 1152 0.0 1
(AU261728) Dictyostelium discoideum vegetative cDNA clone:VS... 793 0.0 2
(AU051880) Dictyostelium discoideum slug cDNA, clone SSC301. 496 0.0 8
(AU262614) Dictyostelium discoideum vegetative cDNA clone:VS... 648 0.0 2
(AU268749) Dictyostelium discoideum vegetative cDNA clone:VS... 626 0.0 2
(C84236) Dictyostelium discoideum slug cDNA, clone SSB361. 504 0.0 2
(AU071379) Dictyostelium discoideum slug cDNA, clone SSB361. 450 e-122 1
(AC119894) Mus musculus chromosome 10, clone RP24-225G11, co... 44 0.007 2
(AC173518) Bos taurus clone CH240-300P2, WORKING DRAFT SEQUE... 48 0.027 5
(BW639497) Dugesia ryukyuensis mRNA, clone: Dr_sW_015_B04, 5... 48 0.028 2
(BW636286) Dugesia ryukyuensis mRNA, clone: Dr_sW_004_P20, 5... 48 0.030 2
(AC203702) Macaca mulatta clone CH250-236F1, WORKING DRAFT S... 42 0.14 4
(BW638806) Dugesia ryukyuensis mRNA, clone: Dr_sW_012_M04, 5... 44 0.34 2
(AC160681) Bos taurus clone CH240-91M3, WORKING DRAFT SEQUEN... 36 0.38 6
(AQ050078) nbxb0003bC02f CUGI Rice BAC Library Oryza sativa ... 36 0.39 2
(AG305221) Mus musculus molossinus DNA, clone:MSMg01-085L12.... 34 0.48 3
(AM444671) Vitis vinifera contig VV78X209754.37, whole genom... 48 0.53 1
(AM430793) Vitis vinifera contig VV78X207894.13, whole genom... 48 0.53 1
(AC162543) Bos taurus clone CH240-122H12, WORKING DRAFT SEQU... 48 0.53 1
(AC172048) Bos taurus clone CH240-292L20, WORKING DRAFT SEQU... 48 0.53 1
(AC165487) Bos taurus clone CH240-172O11, WORKING DRAFT SEQU... 48 0.53 1
(DU969990) 379446 Tomato MboI BAC Library Solanum lycopersic... 48 0.53 1
(AC103939) Mus musculus chromosome 18, clone RP23-300E7, com... 34 0.58 6
(BX820769) Arabidopsis thaliana Full-length cDNA Complete se... 42 0.78 2
(BV421690) S229P6562FC4.T0 GermanShepherd Canis familiaris S... 36 0.95 2
(BB911417) Trifolium pratense cDNA clone:RCE10531. 38 1.1 3
(EK015034) 1092955226419 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.5 2
(EC432535) 132699033 Sea Urchin Mesentary cDNA library Stron... 38 1.7 2
(EC436378) 132690359 Sea Urchin Mesentary cDNA library Stron... 38 1.9 2
(CJ433539) Macaca fascicularis mRNA, clone: QccE-10492, 5' e... 32 2.0 3
(AM482543) Vitis vinifera, whole genome shotgun sequence, co... 46 2.1 1
(AC159759) Bos taurus clone CH240-80B11, WORKING DRAFT SEQUE... 46 2.1 1
(AC223519) Bos taurus clone CH240-467M19, WORKING DRAFT SEQU... 46 2.1 1
(AC181844) Strongylocentrotus purpuratus clone R3-1022E8, WO... 46 2.1 1
(AC179245) Strongylocentrotus purpuratus clone R3-42F22, WOR... 46 2.1 1
(AC178929) Strongylocentrotus purpuratus clone R3-3115J8, WO... 46 2.1 1
(AC177363) Strongylocentrotus purpuratus clone R3-1032D8, WO... 46 2.1 1
(AC163928) Bos taurus clone CH240-95D13, WORKING DRAFT SEQUE... 46 2.1 1
(CL644666) CH213-78F02.T7 CH213 Gasterosteus aculeatus genom... 46 2.1 1
(DT988473) CLJ237-G06.y1d-s SHGC-CLJ Gasterosteus aculeatus ... 46 2.1 1
(DT988472) CLJ237-G06.x1d-t SHGC-CLJ Gasterosteus aculeatus ... 46 2.1 1
(DT969902) CLJ125-D05.x1d-t SHGC-CLJ Gasterosteus aculeatus ... 46 2.1 1
(DN681326) CGX17-E12.x1d-t SHGC-CGX Gasterosteus aculeatus c... 46 2.1 1
(CJ482389) Macaca fascicularis mRNA, clone: QtrA-18341, 5' e... 46 2.1 1
(AC142143) Medicago truncatula chromosome 8 clone mth2-25c22... 34 2.5 6
(AC224595) Bos taurus clone CH240-480P2, WORKING DRAFT SEQUE... 38 2.6 4
(BH135909) ENTNS20TF Entamoeba histolytica Sheared DNA Entam... 36 2.6 3
(AM946015) Streptococcus uberis 0140J complete genome. 32 3.4 2
(AC121832) Mus musculus chromosome 10 clone RP24-67D23, comp... 42 3.7 2
(DN603331) ACAC-aac09m03.g1 Hydra EST UCI 7 Hydra magnipapil... 40 4.0 2
(CO603676) DG8-266p13 DG8-testis Canis lupus familiaris cDNA... 36 4.0 2
(AL676316) Xenopus tropicalis EST, clone TGas055b05 5'. 32 4.3 3
(AL675853) Xenopus tropicalis EST, clone TGas051p11 5'. 32 4.3 3
(AL631832) Xenopus tropicalis EST, clone TGas015k22 5'. 32 4.3 3
(DN749239) GL-Cf-6032 GLGC-LIB0001-cf Canis familiaris Norma... 36 4.4 2
(AL801090) Xenopus tropicalis EST, clone TNeu127m20 5'. 32 4.5 3
(CN084780) EC2BBA24CD11.g1 Xenopus tropicalis xtbs plasmid l... 32 4.5 3
(AC177330) Strongylocentrotus purpuratus clone R3-46K15, WOR... 34 4.6 5
(AL877112) Xenopus tropicalis EST, clone TEgg053o20 5'. 32 4.6 3
(AL681788) Xenopus tropicalis EST, clone TGas060d09 5'. 32 4.7 3
(CN080323) EC2BBA17DD03.b1 Xenopus tropicalis xtbs plasmid l... 32 4.8 3
(DC177881) Xenopus (Silurana) tropicalis NBRP cDNA clone: st... 32 4.8 3
(CX432916) JGI_XZG16331.fwd NIH_XGC_tropGas7 Xenopus (Silura... 32 4.8 3
(AL640462) Xenopus tropicalis EST, clone TNeu002n08 5'. 32 4.8 3
(CX501316) JGI_XZG32258.fwd NIH_XGC_tropGas7 Xenopus (Silura... 32 4.8 3
(CN090033) EC2BBA32CF03.b1 Xenopus tropicalis xtbs plasmid l... 32 4.8 3
(AP007457) Lotus japonicus genomic DNA, clone: LjT42G24, TM0... 34 4.9 4
(AL855463) Xenopus tropicalis EST, clone TEgg020l06 5'. 32 4.9 3
(DC171862) Xenopus (Silurana) tropicalis NBRP cDNA clone: st... 32 4.9 3
(CW694501) OG_BBa0055B22.f OG_BBa Oryza glaberrima genomic c... 38 5.0 2
(AL885412) Xenopus tropicalis EST, clone TEgg044e05 5'. 32 5.0 3
(CF408147) CH3#052_G09T7 Canine heart normalized cDNA Librar... 36 5.2 2
(CN080324) EC2BBA17DD03.g1 Xenopus tropicalis xtbs plasmid l... 32 5.2 3
(CV210913) EST870623 non-normalized T1 cDNA library Trichomo... 36 5.2 2
(CN090034) EC2BBA32CF03.g1 Xenopus tropicalis xtbs plasmid l... 32 5.3 3
(EL837742) CBWN9633.b1 NICHD_XGC_tropTe1 Xenopus (Silurana) ... 32 5.3 3
(EL676328) CBST7823.fwd NICHD_XGC_tropThy1 Xenopus (Silurana... 32 5.3 3
(CX747849) JGI_ANHP771.rev NIH_XGC_tropNeu5 Xenopus (Siluran... 32 5.3 3
(DC147598) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs... 32 5.4 3
(CZ541883) SRAA-aad40h04.g1 Strongyloides ratti whole genome... 34 5.4 2
(ET288107) S0100H09_SP6 CHORI-214 Salmo salar genomic clone ... 32 5.4 2
(CE010541) tigr-gss-dog-17000321009615 Dog Library Canis lup... 32 5.4 2
(CV210914) EST870624 non-normalized T1 cDNA library Trichomo... 36 5.4 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 5.5 8
(FG775515) G1147P330FO22.T0 Anolis carolinensis pooled norma... 34 5.5 2
(CX747850) JGI_ANHP771.fwd NIH_XGC_tropNeu5 Xenopus (Siluran... 32 5.6 3
(CF767289) CES000930 Bos taurus skin cDNA library Bos taurus... 38 5.7 2
(DC141586) Xenopus (Silurana) tropicalis NBRP cDNA clone: rs... 32 5.7 3
(AG320500) Mus musculus molossinus DNA, clone:MSMg01-106G11.... 32 5.8 3
(CX425172) JGI_XZG12118.fwd NIH_XGC_tropGas7 Xenopus (Silura... 32 5.9 3
(CX420641) JGI_XZG15170.fwd NIH_XGC_tropGas7 Xenopus (Silura... 32 5.9 3
(AL440540) T7 end of clone BD0AA013A11 of library BD0AA from... 42 5.9 2
(DU012143) 298885 Tomato MboI BAC Library Solanum lycopersic... 40 6.0 2
(CX749687) JGI_ANHP2082.rev NIH_XGC_tropNeu5 Xenopus (Silura... 32 6.1 3
(AZ691154) ENTHC26TF Entamoeba histolytica Sheared DNA Entam... 40 6.2 2
(EL837743) CBWN9633.g1 NICHD_XGC_tropTe1 Xenopus (Silurana) ... 32 6.3 3
(CX388353) JGI_XZT22157.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 6.3 3
(AC025564) Homo sapiens chromosome 11 clone RP11-768P16, WOR... 38 6.6 4
(CX898263) JGI_CAAM7926.fwd NIH_XGC_tropTe3 Xenopus (Siluran... 32 6.7 3
(CX368508) JGI_XZT31579.fwd NIH_XGC_tropTad5 Xenopus (Silura... 32 6.7 3
(CX851520) JGI_CAAL7896.fwd NIH_XGC_tropBrn4 Xenopus (Silura... 32 6.7 3
(EL676095) CBST7693.fwd NICHD_XGC_tropThy1 Xenopus (Silurana... 32 6.7 3
(EL632383) CBTC10584.fwd NICHD_XGC_tropBone1 Xenopus (Silura... 32 6.8 3
(DN012621) JGI_CAAQ10408.fwd NIH_XGC_tropHrt1 Xenopus (Silur... 32 6.8 3
(EL676094) CBST7693.rev NICHD_XGC_tropThy1 Xenopus (Silurana... 32 6.8 3
(EL799694) CBSW4835.g1 NICHD_XGC_tropTail_m Xenopus (Siluran... 32 6.9 3
(CR589402) Xenopus tropicalis EST, clone THdA001n23 5'. 32 6.9 3
(EL846047) CBXT5941.g1 NICHD_XGC_trop_25 Xenopus (Silurana) ... 32 7.0 3
(DN003050) JGI_CAAQ4435.fwd NIH_XGC_tropHrt1 Xenopus (Silura... 32 7.0 3
(CX439849) JGI_XZG7951.fwd NIH_XGC_tropGas7 Xenopus (Siluran... 32 7.1 3
(DT422026) JGI_CABJ3556.fwd NIH_XGC_tropSki1 Xenopus (Silura... 32 7.1 3
(AL969286) Xenopus tropicalis EST, clone TGas131i06 5'. 32 7.2 3
(CF225423) AGENCOURT_14936815 NICHD_XGC_Emb8 Xenopus (Silura... 32 7.2 3
(EL799693) CBSW4835.b1 NICHD_XGC_tropTail_m Xenopus (Siluran... 32 7.3 3
(EL846046) CBXT5941.b1 NICHD_XGC_trop_25 Xenopus (Silurana) ... 32 7.3 3
(CF150567) AGENCOURT_14936797 NICHD_XGC_Emb8 Xenopus (Silura... 32 7.4 3
(DN012620) JGI_CAAQ10408.rev NIH_XGC_tropHrt1 Xenopus (Silur... 32 7.6 3
(DN093527) JGI_CABE5355.rev NIH_XGC_tropOva1 Xenopus (Silura... 32 7.6 3
(CX877656) JGI_CAAL18590.fwd NIH_XGC_tropBrn4 Xenopus (Silur... 32 7.6 3
(EL867537) CBXT21234.b1 NICHD_XGC_trop_25 Xenopus (Silurana)... 32 7.7 3
(DN079109) JGI_CABD11312.fwd NIH_XGC_tropLun1 Xenopus (Silur... 32 7.7 3
(DN096399) JGI_CABE6860.rev NIH_XGC_tropOva1 Xenopus (Silura... 32 7.8 3
(DN071917) JGI_CABD6928.fwd NIH_XGC_tropLun1 Xenopus (Silura... 32 7.8 3
(DN093528) JGI_CABE5355.fwd NIH_XGC_tropOva1 Xenopus (Silura... 32 7.8 3
(BX782650) Xenopus tropicalis EST, clone TEgg053o18 3'. 32 8.0 3
(AC181456) Strongylocentrotus purpuratus clone R3-1111M3, WO... 34 8.1 9
(CR574728) Xenopus tropicalis EST, clone THdA037a05 3'. 32 8.1 3
(DN074598) JGI_CABD8381.rev NIH_XGC_tropLun1 Xenopus (Silura... 32 8.1 3
(AL900146) Xenopus tropicalis EST, clone TEgg020l06 3'. 32 8.2 3
(CX877655) JGI_CAAL18590.rev NIH_XGC_tropBrn4 Xenopus (Silur... 32 8.2 3
(BX742001) Xenopus tropicalis EST, clone TTpA059f22 5'. 32 8.2 3
(DT422025) JGI_CABJ3556.rev NIH_XGC_tropSki1 Xenopus (Silura... 32 8.3 3
(BX769566) Xenopus tropicalis EST, clone TEgg044e05 3'. 32 8.3 3
(AC117193) Mus musculus BAC clone RP23-88I6 from 10, complet... 44 8.3 1
(AC116472) Mus musculus chromosome 7, clone RP23-384B23, com... 44 8.3 1
(AC113094) Mus musculus chromosome 10, clone RP23-311O24, co... 44 8.3 1
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 44 8.3 1
(AM474837) Vitis vinifera contig VV78X131415.6, whole genome... 44 8.3 1
(AM434219) Vitis vinifera, whole genome shotgun sequence, co... 44 8.3 1
(AC022858) Homo sapiens chromosome 8, clone RP11-326E22, com... 44 8.3 1
(AC156720) Bos taurus clone CH240-55A17, WORKING DRAFT SEQUE... 44 8.3 1
(AC150915) Bos taurus clone CH240-314E24, WORKING DRAFT SEQU... 44 8.3 1
(AC150849) Bos taurus clone CH240-350K16, WORKING DRAFT SEQU... 44 8.3 1
(AC146918) Bos taurus clone CH240-339A6, WORKING DRAFT SEQUE... 44 8.3 1
(AC123118) Rattus norvegicus clone CH230-168O8, *** SEQUENCI... 44 8.3 1
(AC113767) Rattus norvegicus clone CH230-88H11, WORKING DRAF... 44 8.3 1
(AC109796) Bos taurus clone RP42-541J5, WORKING DRAFT SEQUENCE. 44 8.3 1
(EU686412) Ambystoma mexicanum clone BAC H3_37I23, *** SEQUE... 44 8.3 1
(FI020221) CHO_OF6926xj04r1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 8.3 1
(FI020164) CHO_OF6926xj04f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 8.3 1
(FI016488) CHO_OF6920xk02f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 8.3 1
(FH979211) CHO_OF6825xb15f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 8.3 1
(FH746188) CHO_OF5014xh20f1.ab1 CHO_OF5 Nicotiana tabacum ge... 44 8.3 1
(FH565483) CHO_OF4875xc02f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.3 1
(ET935708) CHO_OF465xn07f2.ab1 CHO_OF Nicotiana tabacum geno... 44 8.3 1
(ET879859) CHO_OF619xg03f1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.3 1
(ET675537) CHO_OF467xl22r1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.3 1
(ET675458) CHO_OF467xl22f2.ab1 CHO_OF Nicotiana tabacum geno... 44 8.3 1
(ER618282) 1093017362818 Global-Ocean-Sampling_GS-36-01-01-2... 44 8.3 1
(EK481060) 1095469516475 Global-Ocean-Sampling_GS-32-01-01-1... 44 8.3 1
(EK343641) 1095467102799 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.3 1
(EJ756674) 1092963087685 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.3 1
(EJ399142) 1093012023280 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.3 1
(EJ337159) 1092963487682 Global-Ocean-Sampling_GS-28-01-01-1... 44 8.3 1
(EJ152394) 1092343775012 Global-Ocean-Sampling_GS-27-01-01-1... 44 8.3 1
(EJ148034) 1092343732692 Global-Ocean-Sampling_GS-27-01-01-1... 44 8.3 1
(EI880423) CAH1-66L7TV CAA1Ba Cicer arietinum genomic clone ... 44 8.3 1
(DX178314) OR_ABa0039G08.r OR_ABa Oryza ridleyi genomic clon... 44 8.3 1
(ES324218) SA_MX1_51e01_SP6 Dogfish Shark Multiple Tissues, ... 44 8.3 1
(DY894417) CeleSEQ13982 Cunninghamella elegans pBluescript (... 44 8.3 1
(CV720257) Sa_mx0_21b12_SP6 Dogfish Shark Multiple Tissues, ... 44 8.3 1
(BY693911) Mus musculus osteoclast-like cell cDNA, RIKEN ful... 44 8.3 1
(BY408821) Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-l... 44 8.3 1
(BM952228) rc56g09.y1 Meloidogyne hapla egg pAMP1 v1 Meloido... 44 8.3 1
(BB211066) Mus musculus 0 day neonate thymus cDNA, RIKEN ful... 44 8.3 1
(FG684801) G1143P331RM18.T0 Anolis carolinensis pooled norma... 44 8.3 1
(FF316123) 279411735 Pea aphid whole body normalized full le... 44 8.3 1
(FE701151) Pv028D_M13F_G09.ab1 Phaseolus vulgaris cv Early g... 44 8.3 1
(FE701150) Pv028D_M13R_G09.ab1 Phaseolus vulgaris cv Early g... 44 8.3 1
(AM180355) Clostridium difficile 630 complete genome. 44 8.3 1
(AE015927) Clostridium tetani E88, complete genome. 44 8.3 1
(DN074599) JGI_CABD8381.fwd NIH_XGC_tropLun1 Xenopus (Silura... 32 8.4 3
(AC167042) Bos taurus clone CH240-193F21, *** SEQUENCING IN ... 38 8.5 5
(CR423255) Xenopus tropicalis EST, clone TTbA050d02 3'. 32 8.5 3
(BX754534) Xenopus tropicalis EST, clone TGas103k15 3'. 32 8.6 3
(CR574727) Xenopus tropicalis EST, clone THdA037a05 5'. 32 8.6 3
(DN003049) JGI_CAAQ4435.rev NIH_XGC_tropHrt1 Xenopus (Silura... 32 8.7 3
(DN071916) JGI_CABD6928.rev NIH_XGC_tropLun1 Xenopus (Silura... 32 8.8 3
(BX758152) Xenopus tropicalis EST, clone TGas131i06 3'. 32 9.0 3
(DN096400) JGI_CABE6860.fwd NIH_XGC_tropOva1 Xenopus (Silura... 32 9.1 3
(AC212849) Populus trichocarpa clone POP043-L20, complete se... 40 9.2 3
(EG655193) AGENCOURT_93547579 NICHD_XGC_tropInt_54 Xenopus (... 32 9.4 3
(AC180523) Strongylocentrotus purpuratus clone R3-3099D12, W... 34 9.6 5
>(AU268748) Dictyostelium discoideum vegetative cDNA clone:VSI471,
5' end single read.
Length = 588
Score = 1152 bits (581), Expect = 0.0
Identities = 581/581 (100%)
Strand = Plus / Plus
Query: 12 aaaatgacatccacaaacattgataacagagtaccaattgaaaaaaccattgaagtcatc 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 aaaatgacatccacaaacattgataacagagtaccaattgaaaaaaccattgaagtcatc 67
Query: 72 gttaagaatgataaaggtgaagaagttaaagttattaaaagatatcaagaatatcaaatc 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gttaagaatgataaaggtgaagaagttaaagttattaaaagatatcaagaatatcaaatc 127
Query: 132 actgtaaagagaaatagaaaggttgatgaaagaaagaaatggaaaaaattcggtgaatgt 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 actgtaaagagaaatagaaaggttgatgaaagaaagaaatggaaaaaattcggtgaatgt 187
Query: 192 gataataaaactggtttagaaaatactgcatatggtgatgaacaattcttagtattaact 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gataataaaactggtttagaaaatactgcatatggtgatgaacaattcttagtattaact 247
Query: 252 agaggtgctgaagttaaagaagaagagaaagatgttgttaaatgtagaatttgtaaaaag 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 agaggtgctgaagttaaagaagaagagaaagatgttgttaaatgtagaatttgtaaaaag 307
Query: 312 aaccatttcactacaaagtgcccatacaaggatgccttagaattaaccactcaaccacaa 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aaccatttcactacaaagtgcccatacaaggatgccttagaattaaccactcaaccacaa 367
Query: 372 aaatcagaaaaagaagagaaaccaatttcaaacaaatacattgcaccaaacttaagaggt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aaatcagaaaaagaagagaaaccaatttcaaacaaatacattgcaccaaacttaagaggt 427
Query: 432 ggatacactggttctgcaccaagtggtagtgatgtaccaagtattatggtttccaatctt 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggatacactggttctgcaccaagtggtagtgatgtaccaagtattatggtttccaatctt 487
Query: 492 tcacaaaatgcaaccgaaaaagatctttacgaattatttggtcaatttggtccagttagc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcacaaaatgcaaccgaaaaagatctttacgaattatttggtcaatttggtccagttagc 547
Query: 552 agagtttcaattccaaaatcaatgggaaggttcatcaaagg 592
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agagtttcaattccaaaatcaatgggaaggttcatcaaagg 588
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 966,284,817
Number of extensions: 63107514
Number of successful extensions: 5307570
Number of sequences better than 10.0: 194
Length of query: 817
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 793
Effective length of database: 99,340,224,878
Effective search space: 78776798328254
Effective search space used: 78776798328254
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.30 |
| Homology vs Protein |
Query= Contig-U04539-1 (Contig-U04539-1Q) /CSM_Contig/Contig-U04539-1Q.Seq.d
(817 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54WM4) RecName: Full=Eukaryotic translation initiation factor ... 358 e-119
(Q6DRC4) RecName: Full=Eukaryotic translation initiation factor ... 86 6e-22
(Q28CY2) RecName: Full=Eukaryotic translation initiation factor ... 85 1e-21
(Q6DJI8) RecName: Full=Eukaryotic translation initiation factor ... 83 4e-21
BT049926_1(BT049926|pid:none) Salmo salar clone ssal-eve-552-345... 82 6e-21
BT047623_1(BT047623|pid:none) Salmo salar clone ssal-evf-578-004... 81 1e-20
(P78795) RecName: Full=Eukaryotic translation initiation factor ... 83 3e-20
AB011823_1(AB011823|pid:none) Schizosaccharomyces pombe mRNA for... 83 4e-20
AK060351_1(AK060351|pid:none) Oryza sativa Japonica Group cDNA c... 73 1e-19
AK291320_1(AK291320|pid:none) Homo sapiens cDNA FLJ76297 complet... 77 2e-19
AY891947_1(AY891947|pid:none) Synthetic construct Homo sapiens c... 77 2e-19
(Q3ZC12) RecName: Full=Eukaryotic translation initiation factor ... 77 2e-19
(Q9Z1D1) RecName: Full=Eukaryotic translation initiation factor ... 77 2e-19
U70733_1(U70733|pid:none) Mus musculus translation initiation fa... 76 3e-19
(A3GGU2) RecName: Full=Eukaryotic translation initiation factor ... 68 3e-18
AF291712_1(AF291712|pid:none) Arabidopsis thaliana initiation fa... 75 4e-18
(A6SGN8) RecName: Full=Eukaryotic translation initiation factor ... 72 4e-18
(Q59ZV5) RecName: Full=Eukaryotic translation initiation factor ... 70 5e-18
FM992688_1307(FM992688|pid:none) Candida dubliniensis CD36 chrom... 69 6e-18
(A7EWN6) RecName: Full=Eukaryotic translation initiation factor ... 72 8e-18
(B4LVR8) RecName: Full=Eukaryotic translation initiation factor ... 67 1e-17
CP000586_398(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 91 5e-17
(B3MYX2) RecName: Full=Eukaryotic translation initiation factor ... 66 6e-17
EF082940_1(EF082940|pid:none) Picea sitchensis clone WS02726_E04... 69 8e-17
(B3P935) RecName: Full=Eukaryotic translation initiation factor ... 65 8e-17
(Q9W4X7) RecName: Full=Eukaryotic translation initiation factor ... 65 1e-16
(B4MA85) RecName: Full=Eukaryotic translation initiation factor ... 65 1e-16
(Q1HQN4) RecName: Full=Eukaryotic translation initiation factor ... 66 2e-16
(B4J4G8) RecName: Full=Eukaryotic translation initiation factor ... 64 2e-16
(A1DGS2) RecName: Full=Eukaryotic translation initiation factor ... 72 3e-16
AP005535_14(AP005535|pid:none) Oryza sativa Japonica Group genom... 66 3e-16
(B4IIC7) RecName: Full=Eukaryotic translation initiation factor ... 65 3e-16
(Q0CPF9) RecName: Full=Eukaryotic translation initiation factor ... 72 4e-16
(Q298C0) RecName: Full=Eukaryotic translation initiation factor ... 65 4e-16
DQ443289_1(DQ443289|pid:none) Bombyx mori eukaryotic translation... 61 5e-16
(B0XS28) RecName: Full=Eukaryotic translation initiation factor ... 71 9e-16
(Q6BT10) RecName: Full=Eukaryotic translation initiation factor ... 59 1e-15
CU928171_154(CU928171|pid:none) Kluyveromyces thermotolerans str... 68 1e-15
(B4PP90) RecName: Full=Eukaryotic translation initiation factor ... 63 1e-15
(Q2H0U6) RecName: Full=Eukaryotic translation initiation factor ... 64 2e-15
AY072407_1(AY072407|pid:none) Arabidopsis thaliana eukaryotic tr... 65 4e-15
(A5DNX9) RecName: Full=Eukaryotic translation initiation factor ... 60 7e-15
AM425899_1(AM425899|pid:none) Vitis vinifera contig VV78X141954.... 61 9e-15
(A1C646) RecName: Full=Eukaryotic translation initiation factor ... 67 9e-15
(B4G3E2) RecName: Full=Eukaryotic translation initiation factor ... 61 9e-15
AB170437_1(AB170437|pid:none) Macaca fascicularis brain cDNA clo... 59 3e-14
(Q759T4) RecName: Full=Eukaryotic translation initiation factor ... 62 2e-13
AM437021_1(AM437021|pid:none) Vitis vinifera contig VV78X048528.... 55 3e-13
EF147516_1(EF147516|pid:none) Populus trichocarpa clone WS0123_B... 56 5e-13
(Q6FRZ6) RecName: Full=Eukaryotic translation initiation factor ... 58 8e-13
(Q04067) RecName: Full=Eukaryotic translation initiation factor ... 54 5e-12
CU928176_545(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 55 6e-12
(Q19706) RecName: Full=Eukaryotic translation initiation factor ... 55 3e-11
EF619483_1(EF619483|pid:none) Cervus elaphus eukaryotic translat... 71 4e-11
(A8WLV5) RecName: Full=Probable eukaryotic translation initiatio... 55 4e-11
(Q5K9M4) RecName: Full=Eukaryotic translation initiation factor ... 56 5e-11
CR940347_866(CR940347|pid:none) Theileria annulata strain Ankara... 55 7e-11
(Q6C747) RecName: Full=Eukaryotic translation initiation factor ... 70 1e-10
AY223240_1(AY223240|pid:none) Schistosoma japonicum clone ZZD385... 69 1e-10
AM910987_170(AM910987|pid:none) Plasmodium knowlesi strain H chr... 46 3e-09
AY641433_1(AY641433|pid:none) Triticum aestivum eukaryotic trans... 46 1e-08
DQ211984_1(DQ211984|pid:none) Toxoplasma gondii eukaryotic trans... 47 2e-08
(Q7QJV0) RecName: Full=Eukaryotic translation initiation factor ... 62 3e-08
AK341137_1(AK341137|pid:none) Acyrthosiphon pisum ACYPI008682 mR... 60 1e-07
(P42731) RecName: Full=Polyadenylate-binding protein 2; ... 42 2e-07
DQ336954_2(DQ336954|pid:none) Glycine max cultivar Williams 82 c... 40 4e-07
D89144_1(D89144|pid:none) Schizosaccharomyces pombe mRNA, partia... 39 4e-07
AK220979_1(AK220979|pid:none) Arabidopsis thaliana mRNA for euka... 40 1e-06
AM444826_1(AM444826|pid:none) Vitis vinifera contig VV78X067276.... 38 3e-06
AB008268_3(AB008268|pid:none) Arabidopsis thaliana genomic DNA, ... 39 4e-06
T09704(T09704) probable arginine/serine-rich splicing factor - a... 40 6e-06
BT052594_1(BT052594|pid:none) Medicago truncatula clone MTYFD_FE... 40 6e-06
BT067913_1(BT067913|pid:none) Zea mays full-length cDNA clone ZM... 39 6e-06
EU961409_1(EU961409|pid:none) Zea mays clone 235210 unknown mRNA. 39 7e-06
BC153489_1(BC153489|pid:none) Danio rerio eukaryotic translation... 53 1e-05
BT039077_1(BT039077|pid:none) Zea mays full-length cDNA clone ZM... 39 1e-05
BT043372_1(BT043372|pid:none) Zea mays full-length cDNA clone ZM... 39 1e-05
EU973819_1(EU973819|pid:none) Zea mays clone 418501 splicing fac... 41 2e-05
AC144459_16(AC144459|pid:none) Medicago truncatula clone mth2-23... 40 3e-05
CR380951_131(CR380951|pid:none) Candida glabrata strain CBS138 c... 36 4e-05
BT038707_1(BT038707|pid:none) Zea mays full-length cDNA clone ZM... 39 4e-05
BT084162_1(BT084162|pid:none) Zea mays full-length cDNA clone ZM... 39 4e-05
BT068264_1(BT068264|pid:none) Zea mays full-length cDNA clone ZM... 39 4e-05
AK340970_1(AK340970|pid:none) Acyrthosiphon pisum ACYPI004547 mR... 51 4e-05
AX969455_1(AX969455|pid:none) Sequence 258 from Patent EP1104808. 39 4e-05
AF240679_1(AF240679|pid:none) Cucumis sativus poly(A)-binding pr... 38 5e-05
AM468150_4(AM468150|pid:none) Vitis vinifera contig VV78X086105.... 38 5e-05
EU960614_1(EU960614|pid:none) Zea mays clone 226607 splicing fac... 40 5e-05
BT033180_1(BT033180|pid:none) Zea mays full-length cDNA clone ZM... 40 5e-05
DQ235162_1(DQ235162|pid:none) Solanum tuberosum clone 153C04 unk... 39 8e-05
FN357347_16(FN357347|pid:none) Schistosoma mansoni genome sequen... 37 2e-04
EF146013_1(EF146013|pid:none) Populus trichocarpa clone WS0114_O... 37 2e-04
EF678280_1(EF678280|pid:none) Picea sitchensis clone WS02912_F09... 39 2e-04
AF190655_1(AF190655|pid:none) Nicotiana tabacum poly(A)-binding ... 37 3e-04
CU928179_297(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 37 4e-04
AM270131_61(AM270131|pid:none) Aspergillus niger contig An07c013... 41 5e-04
AY648773_1(AY648773|pid:none) Danio rerio KIAA0682-like mRNA, co... 33 5e-04
S55785(S55785;S68087;T37634;S52318) nucleolar protein gar2 - fis... 34 5e-04
CR382133_554(CR382133|pid:none) Debaryomyces hansenii strain CBS... 33 6e-04
AE017341_447(AE017341|pid:none) Cryptococcus neoformans var. neo... 35 8e-04
AX463223_1(AX463223|pid:none) Sequence 24 from Patent WO0249625.... 33 8e-04
BC163877_1(BC163877|pid:none) Danio rerio RNA binding motif prot... 33 0.001
BC090711_1(BC090711|pid:none) Danio rerio RNA binding motif prot... 33 0.001
(Q60900) RecName: Full=ELAV-like protein 3; AltName: Full=Hu-ant... 34 0.001
AY036909_1(AY036909|pid:none) Homo sapiens HUC (ELAVL3) mRNA, co... 34 0.001
U29149_1(U29149|pid:none) Mus musculus RNA-binding protein mHuC-... 34 0.001
AC136449_14(AC136449|pid:none) Medicago truncatula clone mth2-11... 33 0.002
AC148528_1(AC148528|pid:none) Medicago truncatula clone mth2-53h... 33 0.002
BC065343_1(BC065343|pid:none) Danio rerio ELAV (embryonic lethal... 33 0.002
AY016023_9(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 33 0.002
CR761704_1(CR761704|pid:none) Xenopus tropicalis finished cDNA, ... 33 0.002
BC136134_1(BC136134|pid:none) Xenopus tropicalis ELAV (embryonic... 33 0.002
BC065641_1(BC065641|pid:none) Danio rerio zgc:77304, mRNA (cDNA ... 34 0.002
I50512(I50512) ribonucleoprotein - zebra fish (fragment) &U1760... 33 0.002
M64603_1(M64603|pid:none) Schizosaccharomyces pombe poly(A)-bind... 35 0.002
BC135736_1(BC135736|pid:none) Xenopus tropicalis hypothetical pr... 34 0.002
BC043735_1(BC043735|pid:none) Xenopus laevis RNA-binding protein... 34 0.002
(Q61701) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 34 0.002
AL583843_2(AL583843|pid:none) Human DNA sequence from clone RP11... 34 0.002
(P26378) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 34 0.002
AK079088_1(AK079088|pid:none) Mus musculus adult male diencephal... 34 0.002
AK014133_1(AK014133|pid:none) Mus musculus 13 days embryo head c... 34 0.002
AL627425_2(AL627425|pid:none) Mouse DNA sequence from clone RP23... 34 0.002
AL627425_4(AL627425|pid:none) Mouse DNA sequence from clone RP23... 34 0.002
AL583843_1(AL583843|pid:none) Human DNA sequence from clone RP11... 34 0.002
I51678(I51678) ribonucleoprotein - African clawed frog &U17599_... 34 0.002
AL583843_3(AL583843|pid:none) Human DNA sequence from clone RP11... 34 0.002
BC036071_1(BC036071|pid:none) Homo sapiens ELAV (embryonic letha... 34 0.002
BC099348_1(BC099348|pid:none) Xenopus laevis RNA-binding protein... 34 0.002
AF041341_1(AF041341|pid:none) Mus musculus RNA binding protein E... 34 0.002
AK298817_1(AK298817|pid:none) Homo sapiens cDNA FLJ51957 complet... 34 0.002
FJ527019_1(FJ527019|pid:none) Macaca mulatta truncated RNA bindi... 37 0.002
BC170091_1(BC170091|pid:none) Xenopus laevis nucleolin, mRNA (cD... 33 0.003
EU972185_1(EU972185|pid:none) Zea mays clone 377000 polyadenylat... 33 0.003
DQ120644_1(DQ120644|pid:none) Hylobates lar PABP3 gene, partial ... 33 0.003
FN357917_1(FN357917|pid:none) Schistosoma mansoni genome sequenc... 36 0.003
BT070141_1(BT070141|pid:none) Zea mays full-length cDNA clone ZM... 34 0.003
AK067210_1(AK067210|pid:none) Oryza sativa Japonica Group cDNA c... 35 0.004
AF349964_1(AF349964|pid:none) Daucus carota poly(A)-binding prot... 32 0.004
AL606604_19(AL606604|pid:none) Oryza sativa genomic DNA, chromos... 35 0.004
(P31209) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 35 0.004
DQ120645_1(DQ120645|pid:none) Cercopithecus sabaeus PABP3 gene, ... 32 0.004
(Q9H361) RecName: Full=Polyadenylate-binding protein 3; ... 32 0.004
AF132026_1(AF132026|pid:none) Homo sapiens testis-specific poly(... 32 0.004
DQ120640_1(DQ120640|pid:none) Homo sapiens PABP3 gene, partial c... 32 0.004
AM920430_123(AM920430|pid:none) Penicillium chrysogenum Wisconsi... 35 0.004
AY188446_1(AY188446|pid:none) Trypanosoma cruzi RNA-binding prot... 38 0.004
AY995201_1(AY995201|pid:none) Pan troglodytes RBMY1 mRNA, partia... 35 0.004
AC002391_1(AC002391|pid:none) Arabidopsis thaliana chromosome 2 ... 33 0.005
AL136900_1(AL136900|pid:none) Homo sapiens mRNA; cDNA DKFZp434M1... 32 0.005
CU638743_725(CU638743|pid:none) Podospora anserina genomic DNA c... 34 0.005
BX294151_174(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 32 0.005
CU633438_863(CU633438|pid:none) Podospora anserina genomic DNA c... 36 0.005
FM992690_515(FM992690|pid:none) Candida dubliniensis CD36 chromo... 33 0.006
DQ120643_1(DQ120643|pid:none) Pongo pygmaeus PABP3 gene, partial... 32 0.006
DQ120646_1(DQ120646|pid:none) Aotus trivirgatus PABP3 gene, part... 32 0.006
(P27476) RecName: Full=Nuclear localization sequence-binding pro... 33 0.007
(O35698) RecName: Full=RNA-binding motif protein, Y chromosome, ... 32 0.007
BC150670_1(BC150670|pid:none) Mus musculus RNA binding motif pro... 32 0.007
AY849643_1(AY849643|pid:none) Magnaporthe grisea protein mlo3-li... 32 0.007
AK342924_1(AK342924|pid:none) Acyrthosiphon pisum ACYPI000005 mR... 32 0.007
AM270139_30(AM270139|pid:none) Aspergillus niger contig An07c022... 33 0.007
AY299514_1(AY299514|pid:none) Danio rerio nil per os (npo) mRNA,... 32 0.008
CR954204_187(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 39 0.008
BC071591_1(BC071591|pid:none) Homo sapiens poly(A) binding prote... 35 0.008
AL365277_14(AL365277|pid:none) Human DNA sequence from clone RP1... 35 0.008
(Q13310) RecName: Full=Polyadenylate-binding protein 4; ... 35 0.008
D12799_1(D12799|pid:none) Homo sapiens mRNA for polyadenylate bi... 35 0.009
AM920437_1689(AM920437|pid:none) Penicillium chrysogenum Wiscons... 43 0.011
FM992690_195(FM992690|pid:none) Candida dubliniensis CD36 chromo... 43 0.011
BT040007_1(BT040007|pid:none) Zea mays full-length cDNA clone ZM... 33 0.011
FN392322_179(FN392322|pid:none) Pichia pastoris GS115 chromosome... 34 0.011
DQ209268_1(DQ209268|pid:none) Bombyx mori sex-lethal isoform 1 (... 37 0.011
AY113652_1(AY113652|pid:none) Drosophila melanogaster SD14970 fu... 40 0.014
AE014296_1805(AE014296|pid:none) Drosophila melanogaster chromos... 40 0.014
(P29341) RecName: Full=Polyadenylate-binding protein 1; ... 32 0.014
(Q9EPH8) RecName: Full=Polyadenylate-binding protein 1; ... 32 0.014
AK089747_1(AK089747|pid:none) Mus musculus activated spleen cDNA... 32 0.014
L25435_1(L25435|pid:none) Synechococcus sp. RNA-binding protein ... 43 0.014
AB171862_1(AB171862|pid:none) Macaca fascicularis brain cDNA clo... 33 0.014
AY956294_1(AY956294|pid:none) Aplysia californica ELAV 2-like pr... 33 0.014
(Q2GSX8) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 32 0.018
AK001239_1(AK001239|pid:none) Homo sapiens cDNA FLJ10377 fis, cl... 35 0.018
(Q9NW13) RecName: Full=RNA-binding protein 28; AltName: Full=RNA... 35 0.018
AK295976_1(AK295976|pid:none) Homo sapiens cDNA FLJ51865 complet... 35 0.018
AF176675_1(AF176675|pid:none) Gallus gallus RNA-binding protein ... 34 0.018
AY122066_1(AY122066|pid:none) Drosophila melanogaster AT09438 fu... 42 0.018
BC074235_1(BC074235|pid:none) Xenopus laevis MGC83967 protein, m... 33 0.019
BC003283_1(BC003283|pid:none) Mus musculus poly(A) binding prote... 33 0.023
AL606917_1(AL606917|pid:none) Mouse DNA sequence from clone RP23... 33 0.023
AL606917_2(AL606917|pid:none) Mouse DNA sequence from clone RP23... 33 0.023
AL606917_4(AL606917|pid:none) Mouse DNA sequence from clone RP23... 33 0.023
AK135962_1(AK135962|pid:none) Mus musculus in vitro fertilized e... 33 0.023
(P0C7P1) RecName: Full=RNA-binding motif protein, Y chromosome, ... 32 0.023
(A6NDE4) RecName: Full=RNA-binding motif protein, Y chromosome, ... 32 0.023
(A6NEQ0) RecName: Full=RNA-binding motif protein, Y chromosome, ... 32 0.023
BC070298_1(BC070298|pid:none) Homo sapiens RNA binding motif pro... 32 0.024
FM992688_16(FM992688|pid:none) Candida dubliniensis CD36 chromos... 31 0.024
EF676472_1(EF676472|pid:none) Picea sitchensis clone WS02739_B06... 31 0.024
(B3NMI5) RecName: Full=Eukaryotic translation initiation factor ... 42 0.024
(Q5AJS6) RecName: Full=Multiple RNA-binding domain-containing pr... 42 0.024
BC068729_1(BC068729|pid:none) Xenopus laevis hypothetical protei... 33 0.025
CU633895_170(CU633895|pid:none) Podospora anserina genomic DNA c... 33 0.029
(P20397) RecName: Full=Nucleolin; AltName: Full=Protein C23; &S... 35 0.030
AJ719881_1(AJ719881|pid:none) Gallus gallus mRNA for hypothetica... 31 0.030
(Q5R8F7) RecName: Full=Polyadenylate-binding protein 1; ... 32 0.030
(P11940) RecName: Full=Polyadenylate-binding protein 1; ... 32 0.030
AK298990_1(AK298990|pid:none) Homo sapiens cDNA FLJ59219 complet... 32 0.030
(Q6CSV3) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 33 0.030
S52491(S52491) polyadenylate binding protein II - human &Z48501... 32 0.030
(Q15415) RecName: Full=RNA-binding motif protein, Y chromosome, ... 32 0.030
BC144577_1(BC144577|pid:none) Homo sapiens RNA binding motif pro... 32 0.030
BC144422_1(BC144422|pid:none) Homo sapiens cDNA clone MGC:177960... 32 0.030
A44275_1(A44275|pid:none) Sequence 3 from Patent WO9511300. &B4... 32 0.031
CR940347_358(CR940347|pid:none) Theileria annulata strain Ankara... 32 0.031
AB207268_1(AB207268|pid:none) Bombyx mori Sxl mRNA for sex-letha... 35 0.031
EU492545_1(EU492545|pid:none) Penaeus monodon variant transforme... 34 0.032
BT070383_1(BT070383|pid:none) Picea sitchensis clone WS02726_C23... 35 0.032
(Q60990) RecName: Full=RNA-binding motif protein, Y chromosome, ... 32 0.040
AY313137_1(AY313137|pid:none) Saccoglossus kowalevskii Hu/elav m... 35 0.040
(B4P5F7) RecName: Full=Eukaryotic translation initiation factor ... 41 0.041
(Q6CQR6) RecName: Full=Multiple RNA-binding domain-containing pr... 41 0.041
CR382136_751(CR382136|pid:none) Debaryomyces hansenii strain CBS... 41 0.041
CR382136_860(CR382136|pid:none) Debaryomyces hansenii chromosome... 41 0.041
BC054991_1(BC054991|pid:none) Xenopus laevis RNA binding motif p... 35 0.053
FN316492_1(FN316492|pid:none) Schistosoma japonicum isolate Anhu... 32 0.056
CP000777_2648(CP000777|pid:none) Leptospira biflexa serovar Pato... 33 0.061
AE017343_511(AE017343|pid:none) Cryptococcus neoformans var. neo... 32 0.061
CP000777_2941(CP000777|pid:none) Leptospira biflexa serovar Pato... 32 0.061
AM494971_498(AM494971|pid:none) Leishmania braziliensis chromoso... 34 0.065
BC102495_1(BC102495|pid:none) Bos taurus ELAV (embryonic lethal,... 30 0.067
AK293374_1(AK293374|pid:none) Homo sapiens cDNA FLJ51582 complet... 40 0.071
CP000733_1149(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 33 0.079
CP000890_1144(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 33 0.079
AE016828_1012(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 33 0.079
BX901876_3(BX901876|pid:none) Zebrafish DNA sequence from clone ... 32 0.081
BX927136_1(BX927136|pid:none) Zebrafish DNA sequence from clone ... 32 0.082
(A4QUF0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 30 0.082
AM502253_532(AM502253|pid:none) Leishmania infantum chromosome 35. 34 0.084
AJ313096_1(AJ313096|pid:none) Beta vulgaris mRNA for salt tolera... 31 0.090
CU928175_517(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 40 0.092
CR954205_358(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 40 0.092
FN316499_1(FN316499|pid:none) Schistosoma japonicum isolate Anhu... 32 0.094
CP001325_185(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 33 0.11
BC168959_1(BC168959|pid:none) Rattus norvegicus poly(A) binding ... 30 0.11
BC076931_1(BC076931|pid:none) Xenopus tropicalis polyadenylate-b... 31 0.11
U79565_1(U79565|pid:none) Macropus eugenii RBM1 mRNA, complete c... 32 0.11
BC044184_1(BC044184|pid:none) Danio rerio ELAV (embryonic lethal... 36 0.11
AC119413_28(AC119413|pid:none) Medicago truncatula clone mth2-19... 30 0.11
EU492544_1(EU492544|pid:none) Penaeus monodon transformer-2 prot... 32 0.11
I50511(I50511) ribonucleoprotein - zebra fish (fragment) &U1760... 36 0.11
BT052824_1(BT052824|pid:none) Medicago truncatula clone MTYFH_FI... 30 0.12
FN323507_1(FN323507|pid:none) Schistosoma japonicum isolate Anhu... 32 0.12
AF064592_1(AF064592|pid:none) Schistosoma japonicum RNA-binding ... 32 0.12
FN323502_1(FN323502|pid:none) Schistosoma japonicum isolate Anhu... 32 0.12
FN367827_5(FN367827|pid:none) Schistosoma mansoni genome sequenc... 32 0.12
FN323494_1(FN323494|pid:none) Schistosoma japonicum isolate Anhu... 32 0.13
FN367827_6(FN367827|pid:none) Schistosoma mansoni genome sequenc... 32 0.13
X57483_1(X57483|pid:none) X.laevis variant mRNA (X ABP 12-5) for... 31 0.14
BC051134_1(BC051134|pid:none) Mus musculus poly(A) binding prote... 32 0.14
CT005264_8(CT005264|pid:none) Leishmania major strain Friedlin, ... 31 0.14
CP000081_499(CP000081|pid:none) Leishmania major chromosome 35, ... 33 0.14
AL672270_2(AL672270|pid:none) Mouse DNA sequence from clone RP23... 36 0.14
AK164496_1(AK164496|pid:none) Mus musculus 13 days embryo heart ... 36 0.14
(A6NFN3) RecName: Full=Fox-1 homolog C; 30 0.14
AK293905_1(AK293905|pid:none) Homo sapiens cDNA FLJ58356 complet... 30 0.14
AK293617_1(AK293617|pid:none) Homo sapiens cDNA FLJ56884 complet... 30 0.14
CR954209_116(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 32 0.17
(Q8R3C6) RecName: Full=Probable RNA-binding protein 19; AltName:... 37 0.17
BC114029_1(BC114029|pid:none) Bos taurus RNA binding motif prote... 36 0.17
BT045983_1(BT045983|pid:none) Salmo salar clone ssal-rgf-538-170... 29 0.17
AK004657_1(AK004657|pid:none) Mus musculus adult male lung cDNA,... 37 0.18
AM270034_36(AM270034|pid:none) Aspergillus niger contig An02c040... 32 0.18
AK053511_1(AK053511|pid:none) Mus musculus 0 day neonate eyeball... 34 0.18
L15365_1(L15365|pid:none) Strongylocentrotus purpuratus stage sp... 35 0.18
AF176673_1(AF176673|pid:none) Gallus gallus RNA-binding protein ... 30 0.19
AP006852_44(AP006852|pid:none) Candida albicans genomic DNA, chr... 32 0.19
EU966310_1(EU966310|pid:none) Zea mays clone 293437 RNA-binding ... 29 0.19
AL590443_73(AL590443|pid:none) chromosome III of strain GB-M1 of... 30 0.20
AP007155_742(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.21
CP000806_3097(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 39 0.21
AY360385_9(AY360385|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.21
BC054774_1(BC054774|pid:none) Mus musculus RNA binding motif pro... 39 0.21
AM920435_1013(AM920435|pid:none) Penicillium chrysogenum Wiscons... 30 0.22
AE016820_121(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 37 0.23
AP003622_9(AP003622|pid:none) Oryza sativa Japonica Group genomi... 31 0.23
AM486977_3(AM486977|pid:none) Vitis vinifera contig VV78X043978.... 30 0.23
AB023046_18(AB023046|pid:none) Arabidopsis thaliana genomic DNA,... 30 0.23
Z50856_1(Z50856|pid:none) C.tentans mRNA for hrp36 protein. 32 0.24
AK131715_1(AK131715|pid:none) Mus musculus adult male testis cDN... 31 0.24
AJ697695_1(AJ697695|pid:none) Nicotiana benthamiana mRNA for ALY... 29 0.25
AM167905_1(AM167905|pid:none) Nicotiana benthamiana mRNA for ALY... 29 0.25
AE014134_1278(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.27
AE014134_1280(AE014134|pid:none) Drosophila melanogaster chromos... 39 0.27
AC103551_5(AC103551|pid:none) Oryza sativa chromosome 3 BAC OSJN... 39 0.27
(O13620) RecName: Full=Multiple RNA-binding domain-containing pr... 39 0.27
CR940353_364(CR940353|pid:none) Theileria annulata strain Ankara... 39 0.27
AK301013_1(AK301013|pid:none) Homo sapiens cDNA FLJ60076 complet... 30 0.31
AK148528_1(AK148528|pid:none) Mus musculus adult pancreas islet ... 30 0.31
AK034536_1(AK034536|pid:none) Mus musculus 12 days embryo embryo... 30 0.31
AB168603_1(AB168603|pid:none) Macaca fascicularis testis cDNA cl... 30 0.31
AK161667_1(AK161667|pid:none) Mus musculus 8 days embryo whole b... 30 0.31
AK089088_1(AK089088|pid:none) Mus musculus 2 days neonate thymus... 30 0.31
BT044027_1(BT044027|pid:none) Salmo salar clone HM6_0854 ataxin ... 29 0.31
AC135595_12(AC135595|pid:none) Oryza sativa chromosome 3 BAC OSJ... 29 0.32
AK070292_1(AK070292|pid:none) Oryza sativa Japonica Group cDNA c... 38 0.35
AY566863_1(AY566863|pid:none) Mus musculus APOBEC-1 stimulating ... 38 0.35
AY566864_1(AY566864|pid:none) Mus musculus truncated APOBEC-1 st... 38 0.35
(P15771) RecName: Full=Nucleolin; AltName: Full=Protein C23; &D... 38 0.35
AF290984_1(AF290984|pid:none) Rattus norvegicus APOBEC-1 complem... 38 0.35
AC108906_21(AC108906|pid:none) Oryza sativa chromosome 3 BAC OSJ... 38 0.35
AK067130_1(AK067130|pid:none) Oryza sativa Japonica Group cDNA c... 38 0.35
AF442134_1(AF442134|pid:none) Rattus norvegicus APOBEC-1 complem... 38 0.35
BC089622_1(BC089622|pid:none) Mus musculus APOBEC1 complementati... 38 0.35
CP001344_55(CP001344|pid:none) Cyanothece sp. PCC 7425, complete... 38 0.35
CR380948_203(CR380948|pid:none) Candida glabrata strain CBS138 c... 38 0.35
CP000585_344(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 38 0.35
CR954210_186(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 38 0.35
(A1D4K4) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 30 0.38
CR380958_544(CR380958|pid:none) Candida glabrata strain CBS138 c... 32 0.38
CU638744_74(CU638744|pid:none) Podospora anserina genomic DNA ch... 29 0.38
CP000881_32(CP000881|pid:none) Hemiselmis andersenii chromosome ... 30 0.39
FN392319_768(FN392319|pid:none) Pichia pastoris GS115 chromosome... 30 0.39
AB005232_16(AB005232|pid:none) Arabidopsis thaliana genomic DNA,... 36 0.39
FN392319_381(FN392319|pid:none) Pichia pastoris GS115 chromosome... 30 0.40
BX548154_1(BX548154|pid:none) clone A24K23, A41I8 of Tetraodon n... 30 0.40
BT077573_1(BT077573|pid:none) Lepeophtheirus salmonis Pacific fo... 32 0.43
AP008209_3108(AP008209|pid:none) Oryza sativa (japonica cultivar... 38 0.45
AP007166_420(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.46
EU966420_1(EU966420|pid:none) Zea mays clone 294374 RNA binding ... 38 0.46
CP000815_769(CP000815|pid:none) Paulinella chromatophora chromat... 38 0.46
FN392322_746(FN392322|pid:none) Pichia pastoris GS115 chromosome... 38 0.46
CP001032_940(CP001032|pid:none) Opitutus terrae PB90-1, complete... 30 0.48
AF293840_1(AF293840|pid:none) Arabidopsis thaliana poly(A) bindi... 32 0.49
AC003979_7(AC003979|pid:none) Arabidopsis thaliana chromosome 1 ... 32 0.49
BC066434_1(BC066434|pid:none) Danio rerio heterogeneous nuclear ... 29 0.52
AF229056_1(AF229056|pid:none) Mus musculus hexaribonucleotide bi... 29 0.52
(Q8TBF4) RecName: Full=Zinc finger CCHC-type and RNA-binding mot... 35 0.53
AJ249323_1(AJ249323|pid:none) Ciona intestinalis mRNA for glycin... 30 0.56
AB026847_1(AB026847|pid:none) Ciona intestinalis CiGRP1 mRNA for... 30 0.56
(P52298) RecName: Full=Nuclear cap-binding protein subunit 2; Al... 30 0.56
(Q9CQ49) RecName: Full=Nuclear cap-binding protein subunit 2; Al... 30 0.56
AB179321_1(AB179321|pid:none) Macaca fascicularis testis cDNA cl... 35 0.57
(O89086) RecName: Full=Putative RNA-binding protein 3; AltName: ... 29 0.57
BC010177_1(BC010177|pid:none) Homo sapiens zinc finger CCHC-type... 35 0.58
BC109899_1(BC109899|pid:none) Bos taurus zinc finger CCHC-type a... 35 0.58
BC005099_1(BC005099|pid:none) Homo sapiens zinc finger CCHC-type... 35 0.58
AK297506_1(AK297506|pid:none) Homo sapiens cDNA FLJ52517 complet... 30 0.59
AL606453_1(AL606453|pid:none) Oryza sativa genomic DNA, chromoso... 28 0.59
JC7299(JC7299)transformer-2-like protein - liverwort (Marchantia... 37 0.59
EF085052_1(EF085052|pid:none) Picea sitchensis clone WS0286_P07 ... 37 0.59
(B4J6D5) RecName: Full=Eukaryotic translation initiation factor ... 37 0.59
(Q9Y580) RecName: Full=RNA-binding protein 7; AltName: Full=RNA-... 37 0.60
AX885578_1(AX885578|pid:none) Sequence 1441 from Patent EP1033401. 37 0.60
AK002015_1(AK002015|pid:none) Homo sapiens cDNA FLJ11153 fis, cl... 37 0.60
(Q3MHY8) RecName: Full=RNA-binding protein 7; AltName: Full=RNA-... 37 0.60
EU971895_1(EU971895|pid:none) Zea mays clone 372141 RNA binding ... 37 0.60
CP000393_4134(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 0.60
AP003687_23(AP003687|pid:none) Oryza sativa Japonica Group genom... 37 0.60
AM269959_20(AM269959|pid:none) Aspergillus niger contig An01c012... 37 0.60
AP008207_3648(AP008207|pid:none) Oryza sativa (japonica cultivar... 37 0.60
AK296144_1(AK296144|pid:none) Homo sapiens cDNA FLJ52508 complet... 30 0.61
AC159435_2(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 32 0.62
AX400057_1(AX400057|pid:none) Sequence 228 from Patent WO0218424. 31 0.64
BT053136_1(BT053136|pid:none) Medicago truncatula clone MTYFL_FM... 29 0.64
(Q96IZ5) RecName: Full=RNA-binding protein 41; AltName: Full=RNA... 31 0.65
AC122728_12(AC122728|pid:none) Medicago truncatula clone mth2-22... 29 0.65
AK001878_1(AK001878|pid:none) Homo sapiens cDNA FLJ11016 fis, cl... 31 0.65
AF026145_1(AF026145|pid:none) Ceratitis capitata sex-lethal homo... 32 0.66
AC159429_6(AC159429|pid:none) Trypanosoma brucei chromosome 7 cl... 29 0.66
AJ715415_1(AJ715415|pid:none) Bactrocera oleae mRNA for sex-leth... 32 0.66
BT043732_1(BT043732|pid:none) Salmo salar clone HM6_0369 nuclear... 31 0.73
AB170452_1(AB170452|pid:none) Macaca fascicularis brain cDNA clo... 28 0.77
AC157373_6(AC157373|pid:none) Medicago truncatula chromosome 7 c... 37 0.78
AF271790_1(AF271790|pid:none) Homo sapiens APOBEC-1 complementat... 37 0.78
AF209192_1(AF209192|pid:none) Homo sapiens Apobec-1 complementat... 37 0.78
AF271789_1(AF271789|pid:none) Homo sapiens APOBEC-1 complementat... 37 0.78
BC054873_1(BC054873|pid:none) Homo sapiens APOBEC1 complementati... 37 0.78
AL512366_4(AL512366|pid:none) Human DNA sequence from clone RP11... 37 0.78
AL512366_3(AL512366|pid:none) Human DNA sequence from clone RP11... 37 0.78
BT056638_1(BT056638|pid:none) Salmo salar clone ssal-eve-513-099... 37 0.78
CU633900_643(CU633900|pid:none) Podospora anserina genomic DNA c... 37 0.78
AC146760_11(AC146760|pid:none) Medicago truncatula clone mth2-17... 37 0.78
AK045723_1(AK045723|pid:none) Mus musculus adult male corpora qu... 37 0.78
BT082928_1(BT082928|pid:none) Anoplopoma fimbria clone afim-evh-... 37 0.78
(Q8CH25) RecName: Full=SAFB-like transcription modulator; AltNam... 37 0.78
AK017839_1(AK017839|pid:none) Mus musculus 8 days embryo whole b... 37 0.78
AK017715_1(AK017715|pid:none) Mus musculus 8 days embryo whole b... 37 0.78
AF378546_1(AF378546|pid:none) Ophiostoma novo-ulmi clone 7 polya... 32 0.79
AX886322_1(AX886322|pid:none) Sequence 2185 from Patent EP1033401. 28 0.79
(Q6CDH3) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 33 0.82
(O13845) RecName: Full=RNA-binding protein rsd1; &CU329670_1673... 29 0.82
BT060465_1(BT060465|pid:none) Zea mays full-length cDNA clone ZM... 31 0.83
AC120539_27(AC120539|pid:none) Oryza sativa (japonica cultivar-g... 31 0.83
AK077594_1(AK077594|pid:none) Mus musculus 8 days embryo whole b... 28 0.84
BT004860_1(BT004860|pid:none) Drosophila melanogaster RE27227 fu... 29 0.84
AY904025_1(AY904025|pid:none) Mus musculus RNA binding motif pro... 28 0.84
AE014297_2648(AE014297|pid:none) Drosophila melanogaster chromos... 29 0.84
CR860292_1(CR860292|pid:none) Pongo abelii mRNA; cDNA DKFZp459D2... 29 0.85
(P60047) RecName: Full=Polyadenylate-binding protein 5; ... 29 0.85
DQ017388_1(DQ017388|pid:none) Mus musculus RNA binding protein 9... 28 0.85
AF229055_1(AF229055|pid:none) Mus musculus hexaribonucleotide bi... 28 0.85
(Q8BIF2) RecName: Full=Fox-1 homolog C; &AL591075_9(AL591075|pi... 29 0.85
AL122118_1(AL122118|pid:none) Homo sapiens mRNA; cDNA DKFZp434O1... 29 0.85
BC072716_1(BC072716|pid:none) Danio rerio zgc:91918, mRNA (cDNA ... 33 0.85
AK160816_1(AK160816|pid:none) Mus musculus 17 days embryo head c... 29 0.85
AK297327_1(AK297327|pid:none) Homo sapiens cDNA FLJ51677 complet... 29 0.85
AL591075_6(AL591075|pid:none) Mouse DNA sequence from clone RP23... 29 0.86
AL662874_3(AL662874|pid:none) Human DNA sequence from clone RP13... 29 0.89
AC092557_8(AC092557|pid:none) Oryza sativa chromosome 3 BAC OSJN... 30 0.89
BT079543_1(BT079543|pid:none) Esox lucius clone eluc-evq-517-071... 31 0.94
(Q15287) RecName: Full=RNA-binding protein with serine-rich doma... 37 1.0
AF274003_1(AF274003|pid:none) Homo sapiens splicing-related fact... 37 1.0
(P13824) RecName: Full=Clustered-asparagine-rich protein; ... 37 1.0
(Q6AYK1) RecName: Full=RNA-binding protein with serine-rich doma... 37 1.0
AF247662_1(AF247662|pid:none) Homo sapiens SR-related protein LD... 37 1.0
DQ974158_1(DQ974158|pid:none) Oncorhynchus mykiss dead-end mRNA,... 37 1.0
A23535(A23535;A49245) clustered asparagine-rich merozoite-associ... 37 1.0
CP000828_1947(CP000828|pid:none) Acaryochloris marina MBIC11017,... 37 1.0
BA000022_1019(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 37 1.0
AC005167_12(AC005167|pid:none) Arabidopsis thaliana chromosome 2... 37 1.0
AY085618_1(AY085618|pid:none) Arabidopsis thaliana clone 16224 m... 37 1.0
B84546(B84546)probable splicing factor [imported] - Arabidopsis ... 37 1.0
CP000393_4135(CP000393|pid:none) Trichodesmium erythraeum IMS101... 37 1.0
AY099852_1(AY099852|pid:none) Arabidopsis thaliana putative spli... 37 1.0
CR860989_1(CR860989|pid:none) Pongo abelii mRNA; cDNA DKFZp459F1... 37 1.0
CU928170_502(CU928170|pid:none) Kluyveromyces thermotolerans str... 37 1.0
CP000581_580(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 29 1.0
CP000361_59(CP000361|pid:none) Arcobacter butzleri RM4018, compl... 29 1.0
(Q5KBW2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 31 1.1
(Q05196) RecName: Full=Polyadenylate-binding protein 5; ... 31 1.1
AY342388_1(AY342388|pid:none) Caenorhabditis elegans putative RN... 29 1.1
BC006986_1(BC006986|pid:none) Homo sapiens RNA binding motif pro... 30 1.1
AF165818_16(AF165818|pid:none) Guillardia theta nucleomorph chro... 29 1.1
EF676928_1(EF676928|pid:none) Picea sitchensis clone WS02758_C10... 29 1.1
CP000080_290(CP000080|pid:none) Leishmania major strain Friedlin... 29 1.2
BC157757_1(BC157757|pid:none) Xenopus tropicalis RNA binding mot... 33 1.2
AF299119_1(AF299119|pid:none) Xenopus laevis RNA-binding protein... 33 1.2
BC056659_1(BC056659|pid:none) Xenopus laevis hypothetical protei... 33 1.2
D59253_1(D59253|pid:none) Homo sapiens mRNA for NCBP interacting... 30 1.2
AE015928_1887(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 36 1.3
AC137701_16(AC137701|pid:none) Medicago truncatula clone mth2-35... 36 1.3
F84671(F84671)hypothetical protein At2g27330 [imported] - Arabid... 36 1.3
CP000777_1786(CP000777|pid:none) Leptospira biflexa serovar Pato... 36 1.3
BT025704_1(BT025704|pid:none) Arabidopsis thaliana At2g27330 mRN... 36 1.3
EF085608_1(EF085608|pid:none) Picea sitchensis clone WS0289_F11 ... 36 1.3
CP001344_1126(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 36 1.3
(P04147) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 36 1.3
AF338225_1(AF338225|pid:none) Xenopus laevis embryonic poly(A) b... 32 1.4
EU616680_1(EU616680|pid:none) Mus musculus betaCstF-64 variant 3... 28 1.4
EU616682_1(EU616682|pid:none) Mus musculus betaCstF-64 variant 1... 28 1.4
BC126543_1(BC126543|pid:none) Bos taurus cleavage stimulation fa... 28 1.4
AK032817_1(AK032817|pid:none) Mus musculus 12 days embryo male w... 28 1.4
(Q5RDA3) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 28 1.4
(Q8HXM1) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 28 1.4
BC033135_1(BC033135|pid:none) Homo sapiens, Similar to cleavage ... 28 1.4
BC041291_1(BC041291|pid:none) Xenopus laevis cleavage stimulatio... 28 1.4
AL671915_5(AL671915|pid:none) Mouse DNA sequence from clone RP23... 28 1.4
AP008217_632(AP008217|pid:none) Oryza sativa (japonica cultivar-... 28 1.4
AJ719664_1(AJ719664|pid:none) Gallus gallus mRNA for hypothetica... 28 1.4
AC146948_16(AC146948|pid:none) Oryza sativa (japonica cultivar-g... 35 1.4
AC004261_16(AC004261|pid:none) Arabidopsis thaliana chromosome 2... 28 1.4
FN357336_36(FN357336|pid:none) Schistosoma mansoni genome sequen... 32 1.4
AL451015_4(AL451015|pid:none) Neurospora crassa DNA linkage grou... 28 1.4
(Q7ZT82) RecName: Full=Fox-1 homolog-like protein 1; AltName: Fu... 28 1.4
AF234183_1(AF234183|pid:none) Lucilia cuprina sex-lethal protein... 31 1.4
AJ720700_1(AJ720700|pid:none) Gallus gallus partial mRNA for hyp... 28 1.5
AE014296_1940(AE014296|pid:none) Drosophila melanogaster chromos... 29 1.7
CP000462_1744(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 29 1.7
CP000890_872(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 29 1.7
BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 28 1.7
AE014296_1941(AE014296|pid:none) Drosophila melanogaster chromos... 29 1.7
AE014296_1944(AE014296|pid:none) Drosophila melanogaster chromos... 29 1.7
AL391737_82(AL391737|pid:none) chromosome I of strain GB-M1 of E... 36 1.7
AE014298_1908(AE014298|pid:none) Drosophila melanogaster chromos... 36 1.7
AE014296_1943(AE014296|pid:none) Drosophila melanogaster chromos... 29 1.7
AK156773_1(AK156773|pid:none) Mus musculus activated spleen cDNA... 29 1.7
AJ851483_1(AJ851483|pid:none) Gallus gallus mRNA for hypothetica... 36 1.7
AM920431_962(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 36 1.7
(Q9H8U9) RecName: Full=SAFB-like transcription modulator; AltNam... 36 1.7
EF676187_1(EF676187|pid:none) Picea sitchensis clone WS02717_O03... 36 1.7
BX538353_34(BX538353|pid:none) Cryptosporidium parvum chromosome... 36 1.7
AK000867_1(AK000867|pid:none) Homo sapiens cDNA FLJ10005 fis, cl... 36 1.7
FN392321_207(FN392321|pid:none) Pichia pastoris GS115 chromosome... 32 1.7
(Q6DEY7) RecName: Full=Embryonic polyadenylate-binding protein; ... 32 1.8
BT038473_1(BT038473|pid:none) Zea mays full-length cDNA clone ZM... 30 1.8
EU743745_1(EU743745|pid:none) Xenopus laevis RNA binding protein... 30 1.8
DQ778625_1(DQ778625|pid:none) Homo sapiens unknown mRNA. 27 1.8
AK055213_1(AK055213|pid:none) Homo sapiens cDNA FLJ30651 fis, cl... 27 1.8
AY659956_1(AY659956|pid:none) Mus musculus ataxin-2 binding prot... 27 1.8
AF191501_1(AF191501|pid:none) Mus musculus hexaribonucleotide bi... 27 1.8
BC149447_1(BC149447|pid:none) Bos taurus RNA binding motif prote... 27 1.8
AM419009_1(AM419009|pid:none) Homo sapiens partial mRNA for RNA ... 27 1.8
AB041596_1(AB041596|pid:none) Mus musculus fox-1 mRNA for RNA-bi... 27 1.8
(A6QPR6) RecName: Full=RNA-binding protein 9; AltName: Full=RNA-... 27 1.8
AY659957_1(AY659957|pid:none) Mus musculus ataxin-2 binding prot... 27 1.8
AF229058_1(AF229058|pid:none) Homo sapiens hexaribonucleotide bi... 27 1.8
AY659955_1(AY659955|pid:none) Mus musculus ataxin-2 binding prot... 27 1.8
AL049748_4(AL049748|pid:none) Human DNA sequence from clone RP1-... 27 1.8
AL049748_5(AL049748|pid:none) Human DNA sequence from clone RP1-... 27 1.8
>(Q54WM4) RecName: Full=Eukaryotic translation initiation factor 3
subunit G; Short=eIF3g; AltName:
Full=Eukaryotic translation initiation factor 3 subunit
4; AltName: Full=Eukaryotic translation initiation
factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit;
Length = 233
Score = 358 bits (920), Expect(2) = e-119
Identities = 179/194 (92%), Positives = 179/194 (92%)
Frame = +3
Query: 15 MTSTNIDNRVPIEKTIEVIVKNDKGEEVKVIKRYQEYQITVKRNRKVDERKKWKKFGECD 194
MTSTNIDNRVPIEKTIEVIVKNDKGEEVKVIKRYQEYQITVKRNRKVDERKKWKKFGECD
Sbjct: 1 MTSTNIDNRVPIEKTIEVIVKNDKGEEVKVIKRYQEYQITVKRNRKVDERKKWKKFGECD 60
Query: 195 NKTGLENTAYGDEQFLVLTRGAXXXXXXXXXXXCRICKKNHFTTKCPYKDALELTTQPQK 374
NKTGLENTAYGDEQFLVLTRGA CRICKKNHFTTKCPYKDALELTTQPQK
Sbjct: 61 NKTGLENTAYGDEQFLVLTRGAEVKEEEKDVVKCRICKKNHFTTKCPYKDALELTTQPQK 120
Query: 375 SEKEEKPISNKYIAPNLRGGYTGSAPSGSDVPSIMVSNLSQNATEKDLYELFGQFGPVSR 554
SEKEEKPISNKYIAPNLRGGYTGSAPSGSDVPSIMVSNLSQNATEKDLYELFGQFGPVSR
Sbjct: 121 SEKEEKPISNKYIAPNLRGGYTGSAPSGSDVPSIMVSNLSQNATEKDLYELFGQFGPVSR 180
Query: 555 VSIPKSMGRFIKGF 596
VSIPKSM KGF
Sbjct: 181 VSIPKSMEGSSKGF 194
Score = 93.2 bits (230), Expect(2) = e-119
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1
Query: 577 EGSSKGFAYVTYNHLDSAEKALKQLNGHRYDYLVLSLEFAKKKSL 711
EGSSKGFAYVTYNHLDSAEKALKQLNGHRYDYLVLSLEFAKKKSL
Sbjct: 188 EGSSKGFAYVTYNHLDSAEKALKQLNGHRYDYLVLSLEFAKKKSL 232
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,105,203,071
Number of extensions: 19497075
Number of successful extensions: 66048
Number of sequences better than 10.0: 787
Number of HSP's gapped: 65906
Number of HSP's successfully gapped: 1452
Length of query: 272
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 145
Effective length of database: 646,092,785
Effective search space: 93683453825
Effective search space used: 93683453825
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
3 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |