| Homology vs DNA |
 Query= Contig-U04447-1 (Contig-U04447-1Q) /CSM_Contig/Contig-U04447-1Q.Seq.d
(775 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU076377) Dictyostelium discoideum slug cDNA, clone SSA673. 583 0.0 2
(C83929) Dictyostelium discoideum slug cDNA, clone SSA673. 216 2e-98 2
(BX209639) Danio rerio genomic clone DKEY-250J8, genomic sur... 50 0.13 1
(CW875865) sh2a20-59.b_034.ab1 Whole-genome shotgun library ... 40 0.33 2
(AX346644) Sequence 1715 from Patent WO0200928. 38 0.56 2
(CU469290) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 1.1 4
(BZ033592) oeh05b04.g1 B.oleracea002 Brassica oleracea genom... 34 1.4 2
(AC153486) Mus musculus 6 BAC RP23-27E5 (Roswell Park Cancer... 46 2.0 1
(AC012147) Mus musculus, clone RP23-191A4, complete sequence. 46 2.0 1
(AP010347) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 2.0 1
(AP010346) Lotus japonicus genomic DNA, chromosome 4, clone:... 46 2.0 1
(AC139753) Mus musculus chromosome UNK clone RP24-186H11, WO... 46 2.0 1
(AC015797) Mus musculus clone RP23-191A4, WORKING DRAFT SEQU... 46 2.0 1
(AZ091532) RPCI-23-27E5.TJ RPCI-23 Mus musculus genomic clon... 46 2.0 1
(AZ058620) RPCI-23-416H21.TJ RPCI-23 Mus musculus genomic cl... 46 2.0 1
(EK222426) 1095460145475 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.0 1
(EJ904596) 1093018506168 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.0 1
(EJ877040) 1093018375704 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.0 1
(DU948116) 409413 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.0 1
(DU938392) 365709 Tomato EcoRI BAC Library Solanum lycopersi... 46 2.0 1
(CI490492) Oryza sativa Japonica Group cDNA, clone: J07B5194... 46 2.0 1
(AC189254) Brassica rapa subsp. pekinensis clone KBrB019O05,... 36 3.1 5
(AJ249446) Bacillus thuringiensis slpA gene for surface-laye... 38 5.7 3
(AM688606) Entamoeba terrapinae GSS, clone terra268h06.p1k. 32 5.7 3
(AC074019) Homo sapiens BAC clone RP11-271M11 from 2, comple... 36 6.8 4
(AL732496) Mouse DNA sequence from clone RP23-35G10 on chrom... 44 7.9 1
(AC152417) Mus musculus BAC clone RP23-56I21 from chromosome... 44 7.9 1
(AC132135) Mus musculus BAC clone RP23-268C21 from 10, compl... 44 7.9 1
(AC123599) Mus musculus chromosome 5, clone RP23-231D13, com... 44 7.9 1
(AC123040) Mus musculus BAC clone RP24-532L16 from chromosom... 44 7.9 1
(EU669439) Vitis hybrid cultivar Regent VRP1-1, VRP1-2, and ... 44 7.9 1
(AP008218) Oryza sativa (japonica cultivar-group) genomic DN... 44 7.9 1
(AP008212) Oryza sativa (japonica cultivar-group) genomic DN... 44 7.9 1
(AP004725) Oryza sativa Japonica Group genomic DNA, chromoso... 44 7.9 1
(AL935070) Oryza sativa chromosome 12, . BAC OSJNBa0040P10 o... 44 7.9 1
(AC189617) Brassica rapa subsp. pekinensis clone KBrH102A07,... 44 7.9 1
(BD453067) Diagnosis of Diseases Associated with tumor suppr... 44 7.9 1
(AX458482) Sequence 28 from Patent WO0246454. 44 7.9 1
(AX251546) Sequence 514 from Patent WO0168912. 44 7.9 1
(AL928646) Human DNA sequence from clone CTD-2328D6 on chrom... 44 7.9 1
(AC162835) Bos taurus clone CH240-123H21, WORKING DRAFT SEQU... 44 7.9 1
(AL928664) Human DNA sequence *** SEQUENCING IN PROGRESS ***... 44 7.9 1
(AC211812) Equus caballus clone CH241-321N19, WORKING DRAFT ... 44 7.9 1
(AC173769) Bos taurus clone CH240-181B18, WORKING DRAFT SEQU... 44 7.9 1
(AK171905) Mus musculus activated spleen cDNA, RIKEN full-le... 44 7.9 1
(AK136150) Mus musculus in vitro fertilized eggs cDNA, RIKEN... 44 7.9 1
(AK018456) Mus musculus 16 days embryo lung cDNA, RIKEN full... 44 7.9 1
(AZ352527) 1M0090H21R Mouse 10kb plasmid UUGC1M library Mus ... 44 7.9 1
(FI189428) CccaBa002-I14TR CccABa Cajanus cajan genomic clon... 44 7.9 1
(EK478092) 1095469496739 Global-Ocean-Sampling_GS-32-01-01-1... 44 7.9 1
(EJ895274) 1093018464313 Global-Ocean-Sampling_GS-30-02-01-1... 44 7.9 1
(EJ153603) 1092343787579 Global-Ocean-Sampling_GS-27-01-01-1... 44 7.9 1
(ED015228) MUGQ_CH252P103J24Sp6_CN41_040 CHORI-252 Vervet Mo... 44 7.9 1
(DX022689) KBrB016N10F KBrB, Brassica rapa BamHI BAC library... 44 7.9 1
(DU967951) 297627 Tomato MboI BAC Library Solanum lycopersic... 44 7.9 1
(DU961339) 232552 Tomato MboI BAC Library Solanum lycopersic... 44 7.9 1
(CV695684) SJS_020_67.T3 SJS Schistosoma japonicum cDNA, mRN... 44 7.9 1
(CK045308) 42921siceh_0593.z1 Oryza sativa cv. PA64s panicle... 44 7.9 1
(CB193249) AGENCOURT_11215728 NIH_MGC_135 Mus musculus cDNA ... 44 7.9 1
(BY765331) Mus musculus activated spleen cDNA, RIKEN full-le... 44 7.9 1
(BY364087) Mus musculus 8 cells embryo 8 cells cDNA, RIKEN f... 44 7.9 1
(BM877993) if45h03.x1 Kaestner wt amplified Mus musculus cDN... 44 7.9 1
(BE199211) us67c02.x1 NCI_CGAP_Mam4 Mus musculus cDNA clone ... 44 7.9 1
(BB702558) Mus musculus in vitro fertilized eggs cDNA, RIKEN... 44 7.9 1
(BB697362) Mus musculus 2 days neonate sympathetic ganglion ... 44 7.9 1
(BB695965) Mus musculus 2 days neonate sympathetic ganglion ... 44 7.9 1
(BB483558) Mus musculus 13 days embryo lung cDNA, RIKEN full... 44 7.9 1
(BB448374) Mus musculus 9 days embryo cDNA, RIKEN full-lengt... 44 7.9 1
(CP000393) Trichodesmium erythraeum IMS101, complete genome. 44 7.9 1
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 44 7.9 1
(AC089997) Homo sapiens chromosome 12 clone RP11-564D18, WOR... 42 8.4 3
(AC013246) Homo sapiens 12 BAC RP11-997P16 (Roswell Park Can... 42 9.4 3
>(AU076377) Dictyostelium discoideum slug cDNA, clone SSA673.
Length = 472
Score = 583 bits (294), Expect(2) = 0.0
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 123 ctttggtggttgtggatataaaatgatttcagtgcatctaaagaaagctaattttctatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctttggtggttgtggatataaaatgatttcagtgcatctaaagaaagctaattttctatt 182
Query: 183 attatgtgtgactacagcatcccaaacttgagaagttttaccagcatgtaataaagttga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attatgtgtgactacagcatcccaaacttgagaagttttaccagcatgtaataaagttga 242
Query: 243 agtacattgtaatagatcaccttctttagcagttcctataaaatttgactttaattctat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 agtacattgtaatagatcaccttctttagcagttcctataaaatttgactttaattctat 302
Query: 303 agttgtgaaaccaattgaattttttggtaattttttaaaacatgcatatccacaagaagt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agttgtgaaaccaattgaattttttggtaattttttaaaacatgcatatccacaagaagt 362
Query: 363 atcagctaatgttataatgctacctgcatgtacatatccatttgatgccaagtg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atcagctaatgttataatgctacctgcatgtacatatccatttgatgccaagtg 416
Score = 99.6 bits (50), Expect(2) = 0.0
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 417 tgtaattggtaattcaattgtaactgattcatcaccaacatctttaacat 466
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tgtaattggtaattcaattgtaactgattcatcaccaacatctttaacat 472
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 711,751,290
Number of extensions: 44415728
Number of successful extensions: 3816853
Number of sequences better than 10.0: 75
Length of query: 775
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 751
Effective length of database: 99,340,224,878
Effective search space: 74604508883378
Effective search space used: 74604508883378
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| Homology vs Protein |
Query= Contig-U04447-1 (Contig-U04447-1Q) /CSM_Contig/Contig-U04447-1Q.Seq.d
(775 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CP000386_894(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 127 4e-28
CR555306_3031(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 126 7e-28
CP000089_3552(CP000089|pid:none) Dechloromonas aromatica RCB, co... 120 5e-26
AP009153_1272(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 119 1e-25
CP001281_3470(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 118 2e-25
CP000927_341(CP000927|pid:none) Caulobacter sp. K31, complete ge... 118 2e-25
CP001114_1062(CP001114|pid:none) Deinococcus deserti VCD115, com... 108 1e-22
CP000089_3204(CP000089|pid:none) Dechloromonas aromatica RCB, co... 97 7e-19
CP000820_3860(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 69 2e-10
CP000250_2500(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 67 6e-10
CU234118_3201(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 66 1e-09
CP000283_2924(CP000283|pid:none) Rhodopseudomonas palustris BisB... 65 2e-09
BA000040_4161(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 64 4e-09
CP000489_2692(CP000489|pid:none) Paracoccus denitrificans PD1222... 63 9e-09
CP000686_2380(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 63 1e-08
BX572602_263(BX572602|pid:none) Rhodopseudomonas palustris CGA00... 62 2e-08
CP000463_2382(CP000463|pid:none) Rhodopseudomonas palustris BisA... 62 3e-08
CP000804_2168(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 59 1e-07
CP001638_1678(CP001638|pid:none) Geobacillus sp. WCH70, complete... 59 2e-07
CP001110_1495(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 59 2e-07
CP000356_1074(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 59 2e-07
AP006716_2007(AP006716|pid:none) Staphylococcus haemolyticus JCS... 57 5e-07
AE017262_2334(AE017262|pid:none) Listeria monocytogenes str. 4b ... 57 7e-07
CP001117_185(CP001117|pid:none) Deinococcus deserti VCD115 plasm... 57 9e-07
AG1742(AG1742) B. subtilis YuxO protein homolog lin2484 [importe... 56 1e-06
AI1372(AI1372) B. subtilis YuxO protein homolog lmo2385 [importe... 55 3e-06
AE006470_1299(AE006470|pid:none) Chlorobium tepidum TLS, complet... 55 3e-06
CP001097_1458(CP001097|pid:none) Chlorobium limicola DSM 245, co... 55 3e-06
CP000492_1587(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 55 3e-06
CT573213_3104(CT573213|pid:none) Frankia alni str. ACN14A chromo... 54 4e-06
CP000510_636(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 54 4e-06
AP008957_870(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 54 6e-06
AM181176_250(AM181176|pid:none) Pseudomonas fluorescens SBW25 co... 54 6e-06
AY657407_1(AY657407|pid:none) Synthetic construct Peudomonas aer... 54 7e-06
CP001108_1419(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 53 1e-05
CP001101_976(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 53 1e-05
BX571856_884(BX571856|pid:none) Staphylococcus aureus subsp. aur... 53 1e-05
CP000680_355(CP000680|pid:none) Pseudomonas mendocina ymp, compl... 53 1e-05
AP007255_3601(AP007255|pid:none) Magnetospirillum magneticum AMB... 53 1e-05
CP001229_1518(CP001229|pid:none) Sulfurihydrogenibium azorense A... 52 2e-05
BA000033_826(BA000033|pid:none) Staphylococcus aureus subsp. aur... 52 2e-05
AE014299_1053(AE014299|pid:none) Shewanella oneidensis MR-1, com... 52 2e-05
A89861(A89861) conserved hypothetical protein SA0805 [imported] ... 52 2e-05
CU459003_2344(CU459003|pid:none) Magnetospirillum gryphiswaldens... 52 3e-05
AM260480_1883(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 52 3e-05
CP000563_880(CP000563|pid:none) Shewanella baltica OS155, comple... 52 3e-05
CP000943_579(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 51 4e-05
CP000469_898(CP000469|pid:none) Shewanella sp. ANA-3, complete g... 51 4e-05
CP000961_3840(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 51 4e-05
CP000158_2285(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 51 4e-05
CP000926_266(CP000926|pid:none) Pseudomonas putida GB-1, complet... 50 6e-05
CP001364_882(CP001364|pid:none) Chloroflexus sp. Y-400-fl, compl... 50 6e-05
CP000058_235(CP000058|pid:none) Pseudomonas syringae pv. phaseol... 50 6e-05
CP000774_1317(CP000774|pid:none) Parvibaculum lavamentivorans DS... 50 6e-05
CP001002_222(CP001002|pid:none) Methylobacterium radiotolerans J... 50 8e-05
CP000539_1052(CP000539|pid:none) Acidovorax sp. JS42, complete g... 50 8e-05
AE017194_5019(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 50 8e-05
CP000227_4609(CP000227|pid:none) Bacillus cereus Q1, complete ge... 50 1e-04
AE015929_638(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 50 1e-04
CP000949_4938(CP000949|pid:none) Pseudomonas putida W619, comple... 50 1e-04
CP001177_4831(CP001177|pid:none) Bacillus cereus AH187, complete... 50 1e-04
CP000472_4228(CP000472|pid:none) Shewanella piezotolerans WP3, c... 49 1e-04
CP000158_1443(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 49 1e-04
CP000510_1397(CP000510|pid:none) Psychromonas ingrahamii 37, com... 49 1e-04
CP000903_4618(CP000903|pid:none) Bacillus weihenstephanensis KBA... 49 1e-04
AY374326_2(AY374326|pid:none) Pseudomonas syringae pv. syringae ... 49 1e-04
FP312975_23(FP312975|pid:none) uncultured bacterial clone magm95... 49 1e-04
CP000159_2674(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 49 1e-04
AE016879_4762(AE016879|pid:none) Bacillus anthracis str. Ames, c... 49 1e-04
CP000485_4230(CP000485|pid:none) Bacillus thuringiensis str. Al ... 49 1e-04
AP008934_1831(AP008934|pid:none) Staphylococcus saprophyticus su... 49 1e-04
BA000012_5452(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 49 2e-04
CP000096_1285(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 49 2e-04
CP000304_275(CP000304|pid:none) Pseudomonas stutzeri A1501, comp... 49 2e-04
AP011115_1114(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 49 2e-04
AM942444_1064(AM942444|pid:none) Corynebacterium urealyticum DSM... 49 2e-04
AP008226_1546(AP008226|pid:none) Thermus thermophilus HB8 genomi... 49 2e-04
CP000821_3933(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 48 3e-04
CP000302_3072(CP000302|pid:none) Shewanella denitrificans OS217,... 48 3e-04
CP001100_2230(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 48 3e-04
AL954747_832(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 48 3e-04
CP000447_559(CP000447|pid:none) Shewanella frigidimarina NCIMB 4... 48 4e-04
CP000964_2933(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 48 4e-04
CP000356_1084(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 48 4e-04
AE015451_242(AE015451|pid:none) Pseudomonas putida KT2440 comple... 47 5e-04
CP000826_3071(CP000826|pid:none) Serratia proteamaculans 568, co... 47 5e-04
CP000712_256(CP000712|pid:none) Pseudomonas putida F1, complete ... 47 5e-04
CP000607_1035(CP000607|pid:none) Chlorobium phaeovibrioides DSM ... 47 7e-04
CP000482_1120(CP000482|pid:none) Pelobacter propionicus DSM 2379... 47 7e-04
CP001349_1500(CP001349|pid:none) Methylobacterium nodulans ORS 2... 47 7e-04
(P76084) RecName: Full=Acyl-coenzyme A thioesterase paaI; ... 46 0.001
CP000494_2693(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 46 0.002
AP006725_2233(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204... 46 0.002
CR954246_2797(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 46 0.002
AP006618_4835(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 46 0.002
CP000157_1967(CP000157|pid:none) Erythrobacter litoralis HTCC259... 45 0.002
CP000579_54(CP000579|pid:none) Rhodobacter sphaeroides ATCC 1702... 45 0.002
CP001124_2517(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 45 0.002
CP000140_1102(CP000140|pid:none) Parabacteroides distasonis ATCC... 45 0.003
CP000094_258(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 45 0.003
CP000482_80(CP000482|pid:none) Pelobacter propionicus DSM 2379, ... 45 0.003
BX572598_154(BX572598|pid:none) Rhodopseudomonas palustris CGA00... 45 0.003
CP001635_1225(CP001635|pid:none) Variovorax paradoxus S110 chrom... 44 0.004
CP001096_1884(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 44 0.004
CP001087_3689(CP001087|pid:none) Desulfobacterium autotrophicum ... 44 0.006
CP000514_325(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 44 0.006
BA000035_1587(BA000035|pid:none) Corynebacterium efficiens YS-31... 44 0.006
CP001635_69(CP001635|pid:none) Variovorax paradoxus S110 chromos... 44 0.006
CP000264_984(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 44 0.006
CP000830_1110(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 44 0.006
CP001281_1465(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 44 0.008
CP000353_1412(CP000353|pid:none) Ralstonia metallidurans CH34 me... 44 0.008
CP001020_818(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 43 0.010
BA000040_7837(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 43 0.010
CP000890_890(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 43 0.010
CP000377_1553(CP000377|pid:none) Silicibacter sp. TM1040, comple... 43 0.010
CP000283_1826(CP000283|pid:none) Rhodopseudomonas palustris BisB... 43 0.010
AF064959_1(AF064959|pid:none) Coxiella burnetii unknown gene. 43 0.010
CP000774_2263(CP000774|pid:none) Parvibaculum lavamentivorans DS... 43 0.013
CP000680_2475(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 43 0.013
AP007255_2606(AP007255|pid:none) Magnetospirillum magneticum AMB... 43 0.013
CP000450_1294(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 43 0.013
CP000362_1643(CP000362|pid:none) Roseobacter denitrificans OCh 1... 43 0.013
CP000884_568(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 43 0.013
CP000927_4879(CP000927|pid:none) Caulobacter sp. K31, complete g... 43 0.013
AM902716_2205(AM902716|pid:none) Bordetella petrii strain DSM 12... 42 0.017
AM039952_179(AM039952|pid:none) Xanthomonas campestris pv. vesic... 42 0.017
AM286690_183(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 42 0.017
CP000539_44(CP000539|pid:none) Acidovorax sp. JS42, complete gen... 42 0.017
CP001392_64(CP001392|pid:none) Diaphorobacter sp. TPSY, complete... 42 0.017
AM942759_1401(AM942759|pid:none) Proteus mirabilis strain HI4320... 42 0.017
CP000448_25(CP000448|pid:none) Syntrophomonas wolfei subsp. wolf... 42 0.017
CP000390_491(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 42 0.022
CP000089_3203(CP000089|pid:none) Dechloromonas aromatica RCB, co... 42 0.022
CP001096_1942(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 42 0.022
CP001322_1031(CP001322|pid:none) Desulfatibacillum alkenivorans ... 42 0.022
AM260479_166(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 42 0.022
CP000089_373(CP000089|pid:none) Dechloromonas aromatica RCB, com... 42 0.029
CP000577_1304(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17... 42 0.029
CP000316_112(CP000316|pid:none) Polaromonas sp. JS666, complete ... 42 0.029
CP000482_2566(CP000482|pid:none) Pelobacter propionicus DSM 2379... 42 0.029
FM178380_531(FM178380|pid:none) Aliivibrio salmonicida LFI1238 c... 42 0.029
CP001117_186(CP001117|pid:none) Deinococcus deserti VCD115 plasm... 41 0.037
CP000927_3323(CP000927|pid:none) Caulobacter sp. K31, complete g... 41 0.037
CP000142_2097(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 41 0.037
AP009152_2237(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 41 0.037
AM181176_1803(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 41 0.037
FM954973_747(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 41 0.037
CP000781_3072(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 41 0.049
CP000316_4116(CP000316|pid:none) Polaromonas sp. JS666, complete... 41 0.049
CP000383_1923(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 40 0.064
AP011115_1749(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 40 0.064
CP001111_102(CP001111|pid:none) Stenotrophomonas maltophilia R55... 40 0.064
CP000094_4199(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 40 0.064
AP009380_462(AP009380|pid:none) Porphyromonas gingivalis ATCC 33... 40 0.083
CP000383_1732(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 40 0.083
CP000832_34(CP000832|pid:none) Dinoroseobacter shibae DFL 12 pla... 40 0.083
AE015924_1414(AE015924|pid:none) Porphyromonas gingivalis W83, c... 40 0.083
CP000542_3857(CP000542|pid:none) Verminephrobacter eiseniae EF01... 40 0.083
AE003853_568(AE003853|pid:none) Vibrio cholerae O1 biovar eltor ... 40 0.083
AP009384_30(AP009384|pid:none) Azorhizobium caulinodans ORS 571 ... 40 0.083
CP000264_657(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 40 0.11
(Q9KM09) UPF0152 protein VC_A0580. &CP001486_728(CP001486|pid:n... 40 0.11
CP000139_2349(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 40 0.11
CP000512_2828(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 40 0.11
CP000697_473(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 40 0.11
AE017180_1120(AE017180|pid:none) Geobacter sulfurreducens PCA, c... 40 0.11
CP000304_1848(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 40 0.11
CU694396_6(CU694396|pid:none) Ralstonia solanacearum strain MolK... 40 0.11
AE005673_2070(AE005673|pid:none) Caulobacter crescentus CB15, co... 40 0.11
BX640431_182(BX640431|pid:none) Bordetella parapertussis strain ... 40 0.11
AP008955_5005(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 39 0.14
CP000113_4281(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 39 0.14
CP001644_1821(CP001644|pid:none) Ralstonia pickettii 12D chromos... 39 0.14
(P14205) RecName: Full=ComA operon protein 2; &B33591(B33591;G7... 39 0.14
DQ058764_150(DQ058764|pid:none) Agrobacterium tumefaciens Ti pla... 39 0.14
CP001655_1651(CP001655|pid:none) Dickeya zeae Ech1591, complete ... 39 0.19
CP000744_3639(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 39 0.19
CP000151_3296(CP000151|pid:none) Burkholderia sp. 383 chromosome... 39 0.19
CU694393_331(CU694393|pid:none) Ralstonia solanacearum strain Mo... 39 0.19
CP000378_2504(CP000378|pid:none) Burkholderia cenocepacia AU 105... 39 0.19
(Q9I3A4) RecName: Full=UPF0152 protein PA1618; &AE004091_1620(A... 39 0.19
CP000264_1025(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 39 0.19
CP000094_1622(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 39 0.19
AM494074_7(AM494074|pid:none) Bacillus amyloliquefaciens degQcom... 39 0.19
CP000614_3255(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 39 0.24
CP000912_336(CP000912|pid:none) Brucella suis ATCC 23445 chromos... 39 0.24
AP009389_1509(AP009389|pid:none) Pelotomaculum thermopropionicum... 39 0.24
EU686639_34(EU686639|pid:none) Uncultured marine group II euryar... 39 0.24
CP001321_2018(CP001321|pid:none) Haemophilus parasuis SH0165, co... 39 0.24
CP001348_2519(CP001348|pid:none) Clostridium cellulolyticum H10,... 39 0.24
CP000076_1701(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 39 0.24
A83149(A83149) hypothetical protein PA3971 [imported] - Pseudomo... 39 0.24
CP000442_840(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 39 0.24
AE014292_346(AE014292|pid:none) Brucella suis 1330 chromosome II... 39 0.24
CP000362_1968(CP000362|pid:none) Roseobacter denitrificans OCh 1... 38 0.32
CP000447_1511(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 38 0.32
CP000440_3177(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 38 0.32
CP000774_1429(CP000774|pid:none) Parvibaculum lavamentivorans DS... 38 0.32
CP000157_189(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 38 0.32
CP000031_2846(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple... 38 0.32
AJ586576_19(AJ586576|pid:none) Xanthomonas albilineans gene clus... 38 0.41
CP001102_882(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 38 0.41
(Q9I644) RecName: Full=UPF0152 protein PA0474; &AE004091_476(AE... 38 0.41
CU914166_1404(CU914166|pid:none) Ralstonia solanacearum strain I... 38 0.41
AP010935_1267(AP010935|pid:none) Streptococcus dysgalactiae subs... 38 0.41
CP000868_3120(CP000868|pid:none) Burkholderia multivorans ATCC 1... 37 0.54
CP000521_2764(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 37 0.54
CP000384_2594(CP000384|pid:none) Mycobacterium sp. MCS, complete... 37 0.54
CR378677_77(CR378677|pid:none) Photobacterium profundum SS9 chro... 37 0.54
CP000438_991(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA1... 37 0.54
AP008937_968(AP008937|pid:none) Lactobacillus fermentum IFO 3956... 37 0.54
CP000377_439(CP000377|pid:none) Silicibacter sp. TM1040, complet... 37 0.54
CP000352_3538(CP000352|pid:none) Ralstonia metallidurans CH34, c... 37 0.54
AP009385_97(AP009385|pid:none) Burkholderia multivorans ATCC 176... 37 0.54
CP000606_1726(CP000606|pid:none) Shewanella loihica PV-4, comple... 37 0.54
CU458896_3553(CU458896|pid:none) Mycobacterium abscessus chromos... 37 0.54
AE008691_1717(AE008691|pid:none) Thermoanaerobacter tengcongensi... 37 0.54
CR522870_255(CR522870|pid:none) Desulfotalea psychrophila LSv54 ... 37 0.70
AE014299_2663(AE014299|pid:none) Shewanella oneidensis MR-1, com... 37 0.70
CP000644_2315(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 37 0.70
CP000267_4050(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 37 0.70
CU633750_799(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 37 0.70
CP000089_101(CP000089|pid:none) Dechloromonas aromatica RCB, com... 37 0.70
CP000830_2071(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 37 0.70
CP000961_223(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 37 0.70
(P34419) RecName: Full=UPF0152 protein F42H10.6; &L08403_2(L084... 37 0.70
CP001052_1887(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 37 0.70
BA000040_1346(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 37 0.70
CP000482_1161(CP000482|pid:none) Pelobacter propionicus DSM 2379... 37 0.92
CP000926_3726(CP000926|pid:none) Pseudomonas putida GB-1, comple... 37 0.92
CP000114_1119(CP000114|pid:none) Streptococcus agalactiae A909, ... 37 0.92
CP000489_687(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 37 0.92
CP000509_2959(CP000509|pid:none) Nocardioides sp. JS614, complet... 37 0.92
AE009948_1116(AE009948|pid:none) Streptococcus agalactiae 2603V/... 37 0.92
BT033631_1(BT033631|pid:none) Zea mays full-length cDNA clone ZM... 36 1.2
BX640419_51(BX640419|pid:none) Bordetella pertussis strain Toham... 36 1.2
BT064006_1(BT064006|pid:none) Zea mays full-length cDNA clone ZM... 36 1.2
CP001503_3268(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 36 1.2
CP000325_2504(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 36 1.2
AM260480_986(AM260480|pid:none) Ralstonia eutropha H16 chromosom... 36 1.2
BX842641_23(BX842641|pid:none) Neurospora crassa DNA linkage gro... 36 1.2
AM743169_134(AM743169|pid:none) Stenotrophomonas maltophilia K27... 36 1.2
AM260479_3626(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 36 1.2
CP000661_1183(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 36 1.2
CP000859_759(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 36 1.6
CP000302_2307(CP000302|pid:none) Shewanella denitrificans OS217,... 36 1.6
CP000949_3481(CP000949|pid:none) Pseudomonas putida W619, comple... 36 1.6
AJ965256_749(AJ965256|pid:none) Dehalococcoides sp. CBDB1 comple... 36 1.6
BX571965_1448(BX571965|pid:none) Burkholderia pseudomallei strai... 36 1.6
CP000929_17(CP000929|pid:none) Caulobacter sp. K31 plasmid pCAUL... 36 1.6
CP000688_812(CP000688|pid:none) Dehalococcoides sp. BAV1, comple... 36 1.6
AM236080_320(AM236080|pid:none) Rhizobium leguminosarum bv. vici... 36 1.6
CR548612_168(CR548612|pid:none) Paramecium tetraurelia macronucl... 36 1.6
CU459141_2161(CU459141|pid:none) Acinetobacter baumannii str. AY... 35 2.1
CP000774_491(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 35 2.1
CU633749_3105(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 35 2.1
CP000503_2342(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 35 2.1
AP006618_2165(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 35 2.1
CP001349_3236(CP001349|pid:none) Methylobacterium nodulans ORS 2... 35 2.1
AP008230_1788(AP008230|pid:none) Desulfitobacterium hafniense Y5... 35 2.1
CP000960_878(CP000960|pid:none) Burkholderia cenocepacia MC0-3 c... 35 2.1
CP001281_699(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 35 2.1
CP000143_789(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 35 2.1
CP000091_1467(CP000091|pid:none) Ralstonia eutropha JMP134 chrom... 35 2.1
CP001336_2895(CP001336|pid:none) Desulfitobacterium hafniense DC... 35 2.1
CP000113_3341(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 35 2.1
CP000884_1893(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 35 2.1
CP000949_2614(CP000949|pid:none) Pseudomonas putida W619, comple... 35 2.1
BA000040_5720(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 35 2.1
CP000863_1402(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 35 2.1
CP001172_2086(CP001172|pid:none) Acinetobacter baumannii AB307-0... 35 2.1
(P95162) RecName: Full=UPF0152 protein Rv1847/MT1895; &AE000516... 35 2.7
CP000454_3221(CP000454|pid:none) Arthrobacter sp. FB24, complete... 35 2.7
BX640415_123(BX640415|pid:none) Bordetella pertussis strain Toha... 35 2.7
AE016796_238(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 35 2.7
CP000027_907(CP000027|pid:none) Dehalococcoides ethenogenes 195,... 35 2.7
CP000382_1569(CP000382|pid:none) Clostridium novyi NT, complete ... 35 2.7
BA000038_756(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr... 35 2.7
CP000407_1045(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 35 2.7
CP000491_283(CP000491|pid:none) Paracoccus denitrificans PD1222 ... 35 2.7
CU694391_3(CU694391|pid:none) Ralstonia solanacearum strain MolK... 35 3.5
AE016825_2299(AE016825|pid:none) Chromobacterium violaceum ATCC ... 35 3.5
EU965862_1(EU965862|pid:none) Zea mays clone 289463 acyl-CoA thi... 35 3.5
CP000133_290(CP000133|pid:none) Rhizobium etli CFN 42, complete ... 35 3.5
BX571658_341(BX571658|pid:none) Wolinella succinogenes, complete... 35 3.5
FN357297_77(FN357297|pid:none) Schistosoma mansoni genome sequen... 35 3.5
CP001074_327(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 35 3.5
AM747720_1966(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 35 3.5
CP000781_894(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 35 3.5
FN357297_76(FN357297|pid:none) Schistosoma mansoni genome sequen... 35 3.5
CP000542_4290(CP000542|pid:none) Verminephrobacter eiseniae EF01... 35 3.5
AM181176_1787(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 34 4.6
CP000504_1332(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 34 4.6
BX572607_228(BX572607|pid:none) Rhodopseudomonas palustris CGA00... 34 4.6
CP001029_1428(CP001029|pid:none) Methylobacterium populi BJ001, ... 34 4.6
AE016853_2177(AE016853|pid:none) Pseudomonas syringae pv. tomato... 34 4.6
CP001150_518(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 34 4.6
CP000577_868(CP000577|pid:none) Rhodobacter sphaeroides ATCC 170... 34 4.6
CP000699_745(CP000699|pid:none) Sphingomonas wittichii RW1, comp... 34 4.6
BA000040_2896(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 34 4.6
CP001616_597(CP001616|pid:none) Tolumonas auensis DSM 9187, comp... 34 6.0
AM167904_1383(AM167904|pid:none) Bordetella avium 197N complete ... 34 6.0
CP001053_2945(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 34 6.0
AL035475_38(AL035475|pid:none) Plasmodium falciparum MAL4P2. &A... 34 6.0
CP000283_2754(CP000283|pid:none) Rhodopseudomonas palustris BisB... 34 6.0
CP000628_384(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 34 6.0
FJ406968_1(FJ406968|pid:none) Plasmodium falciparum isolate W2me... 33 7.8
FJ406967_1(FJ406967|pid:none) Plasmodium falciparum isolate Well... 33 7.8
CP001025_1791(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 33 7.8
CP001504_1973(CP001504|pid:none) Burkholderia glumae BGR1 chromo... 33 7.8
CP000614_1800(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 33 7.8
AL035476_69(AL035476|pid:none) Plasmodium falciparum MAL4P3. &A... 33 7.8
CP000697_189(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 33 7.8
CP000058_1907(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 33 7.8
CP000463_1600(CP000463|pid:none) Rhodopseudomonas palustris BisA... 33 7.8
FJ406977_1(FJ406977|pid:none) Plasmodium falciparum isolate FCR3... 33 7.8
CP000155_4715(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 33 7.8
FJ406979_1(FJ406979|pid:none) Plasmodium falciparum isolate Dd2 ... 33 7.8
DQ150110_1(DQ150110|pid:none) Bacillus pseudofirmus hypothetical... 33 7.8
FJ406982_1(FJ406982|pid:none) Plasmodium falciparum isolate 7G8 ... 33 7.8
FJ406969_1(FJ406969|pid:none) Plasmodium falciparum isolate T9/1... 33 7.8
CP000474_3107(CP000474|pid:none) Arthrobacter aurescens TC1, com... 33 7.8
FJ406971_1(FJ406971|pid:none) Plasmodium falciparum isolate T9/9... 33 7.8
FJ406976_1(FJ406976|pid:none) Plasmodium falciparum isolate HB3 ... 33 7.8
>CP000386_894(CP000386|pid:none) Rubrobacter xylanophilus DSM 9941,
complete genome.
Length = 137
Score = 127 bits (319), Expect = 4e-28
Identities = 60/131 (45%), Positives = 89/131 (67%), Gaps = 4/131 (3%)
Frame = -3
Query: 512 LKTRGGIGLPNYMGLNVKDVGDESVTIELPITH--LASNGYVHAGSIITLADTSCGYACF 339
L RG LP +GL + + + + +A NGY+HA +++ LADT+CGY CF
Sbjct: 7 LNRRGEGTLPGLLGLRFVEAEPGRIRARVGLRRELMAPNGYLHAATVVALADTACGYGCF 66
Query: 338 KKLPKNSIGFTTIELKSNFIGTAKEGDLLQCTSTLLHAGKTSQVWDAVVT--HNNRKLAF 165
LP+ + GFTT ELK+NF+GT +EG+ ++CT+ ++H GKT+QVWDA VT + R++A
Sbjct: 67 VSLPQGAEGFTTAELKTNFLGTKREGE-IECTAVMVHGGKTTQVWDATVTDPDSGRRIAL 125
Query: 164 FRCTEIILYPQ 132
FRCT+I+LYP+
Sbjct: 126 FRCTQILLYPR 136
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 949,150,155
Number of extensions: 17425673
Number of successful extensions: 43233
Number of sequences better than 10.0: 325
Number of HSP's gapped: 43104
Number of HSP's successfully gapped: 325
Length of query: 258
Length of database: 1,061,185,681
Length adjustment: 126
Effective length of query: 132
Effective length of database: 649,361,233
Effective search space: 85715682756
Effective search space used: 85715682756
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
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