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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04444-1
Contig ID Contig-U04444-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04444-1 (Contig-U04444-1Q) /CSM_Contig/Contig-U04444-1Q.Seq.d
AAATTTTGATTCTATCTTATTCTTTTCAATTATTATATCTCTCATCACAT
TCTTTTTTTGGAGTAGACCAGGTACACAATTTTTATCATATCTTAGTGGT
TCAAGAAATGGAAGTAGCTCAATAAGCAACAATAGAATAAATAATAATAC
TAATAACAATAATAATGGCCCCAACTTGGGTAATATTGATTTTTCAGAAA
GTAATAGTAACAATACAAGTAGTAATAATGAAAACAGTAATATACAAACA
ACAGCAACAGCAACAGCAACAGATAATGATACTCCAATAATACAACCAAT
TGAGAGACCAACAGAACCATATCAAGAGAATTTTACATCAGATATTGATG
ATTTAGTTAAAATTAATATTATTCAATCAGAAACAGTTTATCATAGAACA
TTTAGACAATCTAAAATTTTAAAAGTTTATGATTTAAAAAAATATTTTTA
TCCAAAAGAAATTCAAGATAATAAAAGAATTTTATTTATATATAATGGTA
GAGCAATGATTGATAATCAATTTTTATCAACTCATCCAAATTTATTGAAT
GGTGTTAATGGACCGGGTTTCGTTCATTGCTTAATAAAAAATCCT
Gap no gap
Contig length 595
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 875289
End point 874694
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U04444
List of clone(s) 

est1=SSA665F,1,596
Translated Amino Acid sequence 
NFDSILFFSIIISLITFFFWSRPGTQFLSYLSGSRNGSSSISNNRINNNTNNNNNGPNLG
NIDFSESNSNNTSSNNENSNIQTTATATATDNDTPIIQPIERPTEPYQENFTSDIDDLVK
INIIQSETVYHRTFRQSKILKVYDLKKYFYPKEIQDNKRILFIYNGRAMIDNQFLSTHPN
LLNGVNGPGFVHCLIKNP
Translated Amino Acid sequence (All Frames) 
Frame A:
kf*fylilfnyyishhilfle*trytifiis*wfkkwk*lnkqq*nk**y**q**wpqlg
*y*ffrk***qyk****kq*ytnnsnsnsnr**ysnnttn*etnrtisrefyiry**fs*
n*yysirnsls*ni*ti*nfksl*fkkiflskrnsr**knfiyi*w*snd**sifinssk
fiewc*wtgfrsllnkks


Frame B:
NFDSILFFSIIISLITFFFWSRPGTQFLSYLSGSRNGSSSISNNRINNNTNNNNNGPNLG
NIDFSESNSNNTSSNNENSNIQTTATATATDNDTPIIQPIERPTEPYQENFTSDIDDLVK
INIIQSETVYHRTFRQSKILKVYDLKKYFYPKEIQDNKRILFIYNGRAMIDNQFLSTHPN
LLNGVNGPGFVHCLIKNP


Frame C:
ililsysfqllylsshsffgvdqvhnfyhilvvqemevaq*atie*iiilitiimaptwv
ilifqkvivtiqvvimktviykqqqqqqqqimilq*ynqlrdqqnhikrilhqilmi*lk
lilfnqkqfiiehldnlkf*kfmi*knifiqkkfkiikefylyimveq*liinfyqliqi
y*mvlmdrvsfia**ki
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04444-1 (Contig-U04444-1Q)
/CSM_Contig/Contig-U04444-1Q.Seq.d
         (595 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04444-1 (Contig-U04444-1Q) /CSM_Contig/Conti...   809  0.0
Contig-U14899-1 (Contig-U14899-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U11179-1 (Contig-U11179-1Q) /CSM_Contig/Conti...    50  3e-06
Contig-U12080-1 (Contig-U12080-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U10512-1 (Contig-U10512-1Q) /CSM_Contig/Conti...    46  4e-05
Contig-U12392-1 (Contig-U12392-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U12169-1 (Contig-U12169-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U11521-1 (Contig-U11521-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U04229-1 (Contig-U04229-1Q) /CSM_Contig/Conti...    44  2e-04

>Contig-U04444-1 (Contig-U04444-1Q) /CSM_Contig/Contig-U04444-1Q.Seq.d
          Length = 595

 Score =  809 bits (408), Expect = 0.0
 Identities = 422/429 (98%)
 Strand = Plus / Plus

                                                                       
Query: 167 ggccccaacttgggtaatattgatttttcagaaagtaatagtaacaatacaagtagtaat 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ggccccaacttgggtaatattgatttttcagaaagtaatagtaacaatacaagtagtaat 226

                                                                       
Query: 227 aatgaaaacagtaatatacaaacaacagcaacagcaacagcaacagataatgatactcca 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aatgaaaacagtaatatacaaacaacagcaacagcaacagcaacagataatgatactcca 286

                                                                       
Query: 287 ataatacaaccaattgagagaccaacagaaccatatcaagagaattttacatcagatatt 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ataatacaaccaattgagagaccaacagaaccatatcaagagaattttacatcagatatt 346

                                                                       
Query: 347 gatgatttagttaaaattaatattattcaatcagaaacagtttatcatagaacatttaga 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gatgatttagttaaaattaatattattcaatcagaaacagtttatcatagaacatttaga 406

                                                                       
Query: 407 caatctaaaattttaaaagtttatgatttnnnnnnntatttttatccaaaagaaattcaa 466
           |||||||||||||||||||||||||||||       ||||||||||||||||||||||||
Sbjct: 407 caatctaaaattttaaaagtttatgatttaaaaaaatatttttatccaaaagaaattcaa 466

                                                                       
Query: 467 gataataaaagaattttatttatatataatggtagagcaatgattgataatcaattttta 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gataataaaagaattttatttatatataatggtagagcaatgattgataatcaattttta 526

                                                                       
Query: 527 tcaactcatccaaatttattgaatggtgttaatggaccgggtttcgttcattgcttaata 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tcaactcatccaaatttattgaatggtgttaatggaccgggtttcgttcattgcttaata 586

                    
Query: 587 aaaaatcct 595
           |||||||||
Sbjct: 587 aaaaatcct 595


 Score =  214 bits (108), Expect = 8e-56
 Identities = 122/129 (94%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaattttgattctatcttattcttttcaattattatatctctcatcacattcnnnnnnng 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 1   aaattttgattctatcttattcttttcaattattatatctctcatcacattctttttttg 60

                                                                       
Query: 61  gagtagaccaggtacacaatttttatcatatcttagtggttcaagaaatggaagtagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gagtagaccaggtacacaatttttatcatatcttagtggttcaagaaatggaagtagctc 120

                    
Query: 121 aataagcaa 129
           |||||||||
Sbjct: 121 aataagcaa 129


>Contig-U14899-1 (Contig-U14899-1Q) /CSM_Contig/Contig-U14899-1Q.Seq.d
          Length = 983

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 247 aacaacagcaacagcaacagcaaca 271
           |||||||||||||||||||||||||
Sbjct: 466 aacaacagcaacagcaacagcaaca 490


 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 247 aacaacagcaacagcaacagcaacag 272
           ||||||| ||||||||||||||||||
Sbjct: 460 aacaacaacaacagcaacagcaacag 485


 Score = 30.2 bits (15), Expect = 2.6
 Identities = 24/27 (88%)
 Strand = Plus / Plus

                                      
Query: 246 aaacaacagcaacagcaacagcaacag 272
           |||| ||| ||||| ||||||||||||
Sbjct: 453 aaactacaacaacaacaacagcaacag 479


>Contig-U11332-1 (Contig-U11332-1Q) /CSM_Contig/Contig-U11332-1Q.Seq.d
          Length = 3658

 Score = 50.1 bits (25), Expect = 3e-06
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 247  aacaacagcaacagcaacagcaaca 271
            |||||||||||||||||||||||||
Sbjct: 1936 aacaacagcaacagcaacagcaaca 1960


 Score = 42.1 bits (21), Expect = 7e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 247  aacaacagcaacagcaacagcaaca 271
            ||||||||||||||||||| |||||
Sbjct: 1441 aacaacagcaacagcaacatcaaca 1465


 Score = 36.2 bits (18), Expect = 0.042
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 255  caacagcaacagcaacag 272
            ||||||||||||||||||
Sbjct: 1938 caacagcaacagcaacag 1955


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,375
Number of Sequences: 6905
Number of extensions: 13375
Number of successful extensions: 2126
Number of sequences better than 10.0: 354
length of query: 595
length of database: 5,674,871
effective HSP length: 16
effective length of query: 579
effective length of database: 5,564,391
effective search space: 3221782389
effective search space used: 3221782389
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.21
Homology vs DNA 
Query= Contig-U04444-1 (Contig-U04444-1Q) /CSM_Contig/Contig-U04444-1Q.Seq.d
         (595 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU076373) Dictyostelium discoideum slug cDNA, clone SSA665.      533   0.0    4
(BJ347407) Dictyostelium discoideum cDNA clone:dda27c04, 3' ...   159   1e-34  1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    50   2e-06  12
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    52   2e-05  6
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    52   3e-05  6
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    40   4e-05  8
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    50   3e-04  9
(CN809505) EST0851 Metarhizium anisopliae ARSEF 2575 from be...    58   4e-04  1
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7...    52   7e-04  8
(DY893873) CeleSEQ13327 Cunninghamella elegans pBluescript (...    52   0.001  2
(AC126743) Rattus norvegicus clone CH230-6O24, WORKING DRAFT...    44   0.001  2
(AU074828) Dictyostelium discoideum slug cDNA, clone SSM187.       42   0.001  2
(CT855180) Oryza sativa Indica Group EST sequence:OSIGCRN130...    44   0.001  2
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ...    56   0.002  1
(AP006484) Cyanidioschyzon merolae DNA, chromosome 2, comple...    56   0.002  1
(AC127751) Rattus norvegicus clone CH230-23H8, WORKING DRAFT...    56   0.002  1
(AC127065) Rattus norvegicus clone CH230-121O20, *** SEQUENC...    56   0.002  1
(AC119710) Rattus norvegicus clone CH230-255B19, WORKING DRA...    56   0.002  1
(AC105588) Rattus norvegicus clone CH230-239I21, *** SEQUENC...    56   0.002  1
(AC095988) Rattus norvegicus clone CH230-29P9, *** SEQUENCIN...    56   0.002  1
(EL575768) Physarum10588 Physarum polycephalum starvation st...    56   0.002  1
(EL572362) Physarum10589 Physarum polycephalum starvation st...    56   0.002  1
(EL569710) Physarum10591 Physarum polycephalum starvation st...    56   0.002  1
(EL568519) Physarum10590 Physarum polycephalum starvation st...    56   0.002  1
(GH152275) G994P163RJ15.T0 Neurospora crassa cDNA - 1 hour N...    56   0.002  1
(GH136532) G994P131RI9.T0 Neurospora crassa cDNA - 1 hour Ni...    56   0.002  1
(GH022025) G1220P156FI2.T0 Neurospora crassa cDNA - 1 hour O...    56   0.002  1
(GH020084) G1220P154RP22.T0 Neurospora crassa cDNA - 1 hour ...    56   0.002  1
(GE995339) G1220P16RN21.T0 Neurospora crassa cDNA - 1 hour O...    56   0.002  1
(GE924951) G1176P11RO3.T0 Neurospora crassa cDNA - 1 hour Ox...    56   0.002  1
(AM484720) Vitis vinifera, whole genome shotgun sequence, co...    44   0.002  4
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-...    50   0.002  3
(AC214702) Pteropus vampyrus clone CH279-121K1, WORKING DRAF...    54   0.002  3
(AC171994) Bos taurus clone CH240-279M21, WORKING DRAFT SEQU...    52   0.003  3
(AL611951) Mouse DNA sequence from clone RP23-265O1 on chrom...    54   0.006  1
(AC155249) Mus musculus BAC clone RP24-254A5 from chromosome...    54   0.006  1
(AC154307) Mus musculus BAC clone RP23-377C12 from chromosom...    54   0.006  1
(AC131765) Mus musculus BAC clone RP24-240I9 from chromosome...    54   0.006  1
(AC103632) Mus musculus chromosome 1, clone RP24-555D5, comp...    54   0.006  1
(DL131078) Bax-responsive genes for drug target identificati...    54   0.006  1
(CS452640) Sequence 40 from Patent WO2006119494.                   54   0.006  1
(AX536866) Sequence 467 from Patent WO02064766.                    54   0.006  1
(AR941638) Sequence 467 from patent US 7101990.                    54   0.006  1
(AL162425) Human DNA sequence from clone RP11-523L1 on chrom...    54   0.006  1
(AC126962) Rattus norvegicus clone CH230-132K18, WORKING DRA...    54   0.006  1
(AC114383) Rattus norvegicus clone CH230-250I5, WORKING DRAF...    54   0.006  1
(AC099119) Rattus norvegicus clone CH230-16M23, *** SEQUENCI...    54   0.006  1
(AL772309) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    54   0.006  1
(EJ051663) 1095456001828 Global-Ocean-Sampling_GS-26-01-01-1...    54   0.006  1
(CZ283500) cp30c02.r Candida parapsilosis Random Genomic Lib...    54   0.006  1
(BX970516) Forward strand read from insert in 5'HPRT inserti...    54   0.006  1
(EH242574) JGI_ACAC12883.fwd ACAC Phakopsora pachyrhizi TW72...    54   0.006  1
(GH136254) G994P131FI9.T0 Neurospora crassa cDNA - 1 hour Ni...    54   0.006  1
(U66912) Dictyostelium discoideum ORF DG1016 gene, partial cds.    50   0.009  2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    44   0.010  11
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    34   0.011  12
(AM487670) Vitis vinifera contig VV78X194222.8, whole genome...    48   0.011  2
(CP000993) Borrelia recurrentis A1, complete genome.               32   0.012  15
(AC113899) Rattus norvegicus clone CH230-329K9, *** SEQUENCI...    46   0.012  3
(EY559284) CAWT5404.fwd CAWT Capitella sp. I ECS-2004 Primar...    40   0.020  2
(EY750458) CS00-C5-003-095-D05-CT.F Sweet orange flower, gre...    48   0.021  2
(AM426749) Vitis vinifera contig VV78X010330.4, whole genome...    46   0.021  3
(AF007269) Arabidopsis thaliana BAC IG002N01.                      52   0.021  4
(DQ121090) Hucho taimen clone ZA-84a microsatellite sequence.      52   0.025  1
(DQ121071) Hucho taimen clone ZA-64 microsatellite sequence.       52   0.025  1
(DQ120971) Hucho taimen clone ZB-26 microsatellite sequence.       52   0.025  1
(CU571326) Zebrafish DNA sequence from clone CH73-311B20 in ...    52   0.025  1
(CU179646) Zebrafish DNA sequence from clone CH211-5G9.            52   0.025  1
(CR788289) Zebrafish DNA sequence from clone DKEY-176H21.          52   0.025  1
(BX511032) Zebrafish DNA sequence from clone CH211-114B16 in...    52   0.025  1
(BX321884) Zebrafish DNA sequence from clone DKEYP-29A10 in ...    52   0.025  1
(BX000463) Zebrafish DNA sequence from clone CH211-266I2 in ...    52   0.025  1
(EF059308) Synthetic construct Saccharomyces cerevisiae clon...    52   0.025  1
(DQ332239) Synthetic construct Saccharomyces cerevisiae clon...    52   0.025  1
(BV693761) CqfSI_AAC30 Cronartium nuclear microsatellite seq...    52   0.025  1
(BV693757) CqfSI_AAC18 Cronartium nuclear microsatellite seq...    52   0.025  1
(AL400710) T3 end of clone AS0AA023C09 of library AS0AA from...    52   0.025  1
(CT573017) Mouse DNA sequence from clone RP24-309J23 on chro...    52   0.025  1
(CT010585) Mouse DNA sequence from clone RP23-96A14 on chrom...    52   0.025  1
(CT010505) Mouse DNA sequence from clone RP23-99P18 on chrom...    52   0.025  1
(BX323871) Mouse DNA sequence from clone RP24-107M14 on chro...    52   0.025  1
(AL928772) Mouse DNA sequence from clone RP23-247I15 on chro...    52   0.025  1
(AL806535) Mouse DNA sequence from clone RP23-456J6 on chrom...    52   0.025  1
(AC165155) Mus musculus BAC clone RP23-293N22 from chromosom...    52   0.025  1
(AC164162) Mus musculus BAC clone RP23-253E17 from chromosom...    52   0.025  1
(AC158901) Mus musculus chromosome 15, clone RP23-77K13, com...    52   0.025  1
(AC158136) Mus musculus chromosome 7, clone RP23-58I15, comp...    52   0.025  1
(AC154783) Mus musculus BAC clone RP24-466C8 from 12, comple...    52   0.025  1
(AC154647) Mus musculus BAC clone RP23-283P8 from chromosome...    52   0.025  1
(AC154318) Mus musculus BAC clone RP23-316D19 from chromosom...    52   0.025  1
(AC154224) Mus musculus BAC clone RP24-141J15 from chromosom...    52   0.025  1
(AC154202) Mus musculus BAC clone RP24-386E14 from chromosom...    52   0.025  1
(AC154184) Mus musculus BAC clone RP24-67K24 from 13, comple...    52   0.025  1
(AC153858) Mus musculus 10 BAC RP23-139H21 (Roswell Park Can...    52   0.025  1
(AC142262) Mus musculus BAC clone RP24-486I4 from 8, complet...    52   0.025  1
(AC140428) Mus musculus BAC clone RP23-100P8 from chromosome...    52   0.025  1
(AC137974) Mus musculus chromosome 15, clone RP23-17J3, comp...    52   0.025  1
(AC133158) Mus musculus BAC clone RP24-491F15 from 8, comple...    52   0.025  1
(AC129321) Mus musculus BAC clone RP24-160I20 from 8, comple...    52   0.025  1
(AC127594) Mus musculus BAC clone RP23-44G8 from chromosome ...    52   0.025  1
(AC126403) Mus musculus chromosome 15, clone RP24-483E7, com...    52   0.025  1
(AC124700) Mus musculus BAC clone RP24-199L11 from chromosom...    52   0.025  1
(AC124578) Mus musculus BAC clone RP23-166C2 from 18, comple...    52   0.025  1
(AC122574) Rattus norvegicus 7 BAC CH230-134L8 (Children's H...    52   0.025  1
(AC122210) Mus musculus BAC clone RP23-96G7 from chromosome ...    52   0.025  1
(AC121983) Mus musculus BAC clone RP24-292F8 from chromosome...    52   0.025  1
(AC121603) Mus musculus BAC clone RP23-310D9 from 18, comple...    52   0.025  1
(AC120402) Mus musculus chromosome 12, clone RP24-354N2, com...    52   0.025  1
(AC117657) Mus musculus chromosome 15, clone RP23-299O23, co...    52   0.025  1
(AC116474) Mus musculus chromosome 17, clone RP23-386F9, com...    52   0.025  1
(AC111069) Mus musculus chromosome 18, clone RP24-164O22, co...    52   0.025  1
(AC110564) Mus musculus chromosome 12, clone RP23-292A16, co...    52   0.025  1
(AC110552) Mus musculus chromosome 17, clone RP23-247L7, com...    52   0.025  1
(AC105976) Mus musculus chromosome 5, clone RP24-315H14, com...    52   0.025  1
(AC103346) Rattus norvegicus  BAC CH230-2K7 (Children's Hosp...    52   0.025  1
(AC080016) Mus musculus 7 BAC RP23-317H8 complete sequence.        52   0.025  1
(AC080015) Mus musculus 7 BAC RP23-163B17 (RPCI Mouse BAC) c...    52   0.025  1
(AC027655) Mus musculus strain C57BL6/J chromosome 6 clone R...    52   0.025  1
(AC021063) Mus Musculus Chromosome 18  RP23-179K16, complete...    52   0.025  1
(AM418576) Macaca mulatta partial mamu-MICB gene for MIC ant...    52   0.025  1
(AJ291602) Macaca mulatta partial mic2*04 gene for MHC Class...    52   0.025  1
(AF322860) Macaca mulatta MHC class I-related chain (Mamu-MI...    52   0.025  1
(AC210545) Macaca mulatta  BAC CH250-466C8 (Children's Hospi...    52   0.025  1
(AC148679) Macaca mulatta Major Histocompatibility Complex B...    52   0.025  1
(AB128049) Macaca mulatta genes, MHC class I region, partial...    52   0.025  1
(Z73546) S.cerevisiae chromosome XVI reading frame ORF YPL190c.    52   0.025  1
(Z49705) S.cerevisiae chromosome XIII cosmid 8520.                 52   0.025  1
(U05314) Saccharomyces cerevisiae nuclear polyadenylated RNA...    52   0.025  1
(FM992693) Candida dubliniensis CD36 chromosome 6, complete ...    52   0.025  1
(FM992692) Candida dubliniensis CD36 chromosome 5, complete ...    52   0.025  1
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ...    52   0.025  1
(FJ390035) Symbiodinium sp. B1 microsatellite GV2_70 sequence.     52   0.025  1
(EU339083) Secale cereale clone 703_IV-H12 microsatellite se...    52   0.025  1
(EF494636) Ustilago maydis alternative cyclin Pcl11 (pcl11) ...    52   0.025  1
(D37935) Saccharomyces cerevisiae for RNA binding protein, c...    52   0.025  1
(CU640366) Podospora anserina genomic DNA chromosome 2, supe...    52   0.025  1
(CU638743) Podospora anserina genomic DNA chromosome 3, supe...    52   0.025  1
(CU633899) Podospora anserina genomic DNA chromosome 1, supe...    52   0.025  1
(CU633865) Podospora anserina genomic DNA chromosome 5, supe...    52   0.025  1
(CR382138) Debaryomyces hansenii strain CBS767 chromosome F ...    52   0.025  1
(CR382131) Yarrowia lipolytica strain CLIB122 chromosome E c...    52   0.025  1
(CR382130) Yarrowia lipolytica strain CLIB122 chromosome D c...    52   0.025  1
(CR382127) Yarrowia lipolytica strain CLIB122 chromosome A c...    52   0.025  1
(CR382126) Kluyveromyces lactis strain NRRL Y-1140 chromosom...    52   0.025  1
(CR382122) Kluyveromyces lactis strain NRRL Y-1140 chromosom...    52   0.025  1
(CP000498) Pichia stipitis CBS 6054 chromosome 4, complete s...    52   0.025  1
(CP000497) Pichia stipitis CBS 6054 chromosome 3, complete s...    52   0.025  1
(BX908812) Neurospora crassa DNA linkage group VI Cosmid con...    52   0.025  1
(BX842595) Neurospora crassa DNA linkage group II BAC clone ...    52   0.025  1
(AY740076) Ostreococcus tauri LHY-like protein gene, partial...    52   0.025  1
(AY596459) Aspergillus taiensis strain SRRC 1468 transcripti...    52   0.025  1
(AY145029) Saccharomyces kluyveri clone Contig2605 YCK3 gene...    52   0.025  1
(AY092402) Aspergillus ochraceoroseus strain SRRC 1432 aflat...    52   0.025  1
(AY077730) Podospora anserina Bck1-like MAP kinase kinase ki...    52   0.025  1
(AP007151) Aspergillus oryzae RIB40 genomic DNA, SC005.            52   0.025  1
(AP006852) Candida albicans genomic DNA, chromosome 7, compl...    52   0.025  1
(AL670009) Neurospora crassa DNA linkage group V cosmid cont...    52   0.025  1
(AL161491) Arabidopsis thaliana DNA chromosome 4, contig fra...    52   0.025  1
(AJ297292) Populus nigra microsatellite DNA, clone WPMS19.         52   0.025  1
(AJ297287) Populus nigra microsatellite DNA, clone WPMS14.         52   0.025  1
(AF489112) Aspergillus ochraceoroseus transcription factor A...    52   0.025  1
(AE017342) Cryptococcus neoformans var. neoformans JEC21 chr...    52   0.025  1
(AE017341) Cryptococcus neoformans var. neoformans JEC21 chr...    52   0.025  1
(AC209226) Populus trichocarpa clone POP071-K11, complete se...    52   0.025  1
(EA397325) Sequence 46149 from patent US 7314974.                  52   0.025  1
(DL429908) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       52   0.025  1
(DL268838) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       52   0.025  1
(DL265967) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS.       52   0.025  1
(DL131179) Bax-responsive genes for drug target identificati...    52   0.025  1
(DL131097) Bax-responsive genes for drug target identificati...    52   0.025  1
(DL131038) Bax-responsive genes for drug target identificati...    52   0.025  1
(DJ296357) Method for identification of useful proteins deri...    52   0.025  1
(DJ135287) Method for identification of useful proteins deri...    52   0.025  1
(DJ132416) Method for identification of useful proteins deri...    52   0.025  1
(DJ025884) Genome-wide DNA marker of Saccharomyces cerevisiae.     52   0.025  1
(DJ025881) Genome-wide DNA marker of Saccharomyces cerevisiae.     52   0.025  1
(AX537068) Sequence 669 from Patent WO02064766.                    52   0.025  1
(AX536904) Sequence 505 from Patent WO02064766.                    52   0.025  1
(AX536786) Sequence 387 from Patent WO02064766.                    52   0.025  1
(GM666677) Sequence 119 from Patent WO2008074891.                  52   0.025  1
(AR941739) Sequence 669 from patent US 7101990.                    52   0.025  1
(AR941657) Sequence 505 from patent US 7101990.                    52   0.025  1
(AR941598) Sequence 387 from patent US 7101990.                    52   0.025  1
(AR778417) Sequence 223 from patent US 6949356.                    52   0.025  1
(AR558967) Sequence 14098 from patent US 6747137.                  52   0.025  1
(AR554300) Sequence 9431 from patent US 6747137.                   52   0.025  1
(AR527901) Sequence 204 from patent US 6723837.                    52   0.025  1
(M95828) D.virilis homeobox protein (antennapedia) gene, exo...    52   0.025  1
(AE014296) Drosophila melanogaster chromosome 3L, complete s...    52   0.025  1
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505...    52   0.025  1
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084...    52   0.025  1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    52   0.025  1
(AC091127) Drosophila melanogaster 3L BAC RP98-27E18 (Roswel...    52   0.025  1
(AC010711) Drosophila melanogaster 3L BAC RP98-22D12 (Roswel...    52   0.025  1
(AC142467) Rattus norvegicus clone CH230-41G22, WORKING DRAF...    52   0.025  1
(AC142369) Rattus norvegicus clone CH230-507P19, WORKING DRA...    52   0.025  1
(AC141946) Rattus norvegicus clone CH230-386N17, *** SEQUENC...    52   0.025  1
(AC140161) Rattus norvegicus clone CH230-335K22, WORKING DRA...    52   0.025  1
(AC139986) Rattus norvegicus clone CH230-124E12, WORKING DRA...    52   0.025  1
(AC137057) Rattus norvegicus strain Brown Norway clone CH230...    52   0.025  1
(AC136865) Rattus norvegicus clone CH230-331N21, *** SEQUENC...    52   0.025  1
(AC136556) Rattus norvegicus clone CH230-253P17, WORKING DRA...    52   0.025  1
(AC135476) Rattus norvegicus clone CH230-452D21, *** SEQUENC...    52   0.025  1
(AC135124) Rattus norvegicus clone CH230-428P14, WORKING DRA...    52   0.025  1
(AC134221) Rattus norvegicus clone CH230-10O5, WORKING DRAFT...    52   0.025  1
(AC134154) Rattus norvegicus clone CH230-10I12, *** SEQUENCI...    52   0.025  1
(AC134130) Rattus norvegicus clone CH230-42A5, *** SEQUENCIN...    52   0.025  1
(AC133667) Rattus norvegicus clone CH230-274K12, WORKING DRA...    52   0.025  1
(AC132738) Rattus norvegicus clone CH230-354G18, WORKING DRA...    52   0.025  1
(AC132557) Rattus norvegicus clone CH230-163F14, WORKING DRA...    52   0.025  1
(AC132036) Rattus norvegicus clone CH230-210J5, WORKING DRAF...    52   0.025  1
(AC131530) Rattus norvegicus clone CH230-480P24, *** SEQUENC...    52   0.025  1
(AC130143) Rattus norvegicus clone CH230-171A22, WORKING DRA...    52   0.025  1
(AC129796) Rattus norvegicus clone CH230-217A15, *** SEQUENC...    52   0.025  1
(AC129683) Rattus norvegicus clone CH230-291M6, *** SEQUENCI...    52   0.025  1
(AC129350) Rattus norvegicus clone CH230-334P23, WORKING DRA...    52   0.025  1
(AC128297) Rattus norvegicus clone CH230-397O9, *** SEQUENCI...    52   0.025  1
(AC127727) Rattus norvegicus clone CH230-401M12, WORKING DRA...    52   0.025  1
(AC127636) Rattus norvegicus clone CH230-185C9, *** SEQUENCI...    52   0.025  1
(AC127219) Rattus norvegicus clone CH230-7L21, WORKING DRAFT...    52   0.025  1
(AC126897) Rattus norvegicus clone CH230-388K23, WORKING DRA...    52   0.025  1
(AC126655) Rattus norvegicus clone CH230-199J15, *** SEQUENC...    52   0.025  1
(AC126187) Rattus norvegicus clone CH230-521L16, WORKING DRA...    52   0.025  1
(AC126112) Rattus norvegicus clone CH230-76G2, *** SEQUENCIN...    52   0.025  1
(AC123509) Rattus norvegicus clone CH230-85M17, *** SEQUENCI...    52   0.025  1
(AC122959) Rattus norvegicus clone CH230-62A14, WORKING DRAF...    52   0.025  1
(AC122661) Rattus norvegicus clone CH230-239E4, WORKING DRAF...    52   0.025  1
(AC121463) Rattus norvegicus clone CH230-33J4, WORKING DRAFT...    52   0.025  1
(AC121387) Rattus norvegicus clone CH230-179E15, WORKING DRA...    52   0.025  1
(AC121049) Rattus norvegicus clone CH230-405H9, *** SEQUENCI...    52   0.025  1
(AC120936) Rattus norvegicus clone CH230-15G24, WORKING DRAF...    52   0.025  1
(AC120803) Rattus norvegicus clone CH230-252G22, WORKING DRA...    52   0.025  1
(AC120683) Rattus norvegicus clone CH230-15D3, WORKING DRAFT...    52   0.025  1
(AC120310) Rattus norvegicus clone CH230-279L22, *** SEQUENC...    52   0.025  1
(AC120073) Rattus norvegicus clone CH230-357A23, WORKING DRA...    52   0.025  1
(AC118305) Rattus norvegicus clone CH230-253O8, *** SEQUENCI...    52   0.025  1
(AC117097) Rattus norvegicus clone CH230-269C22, WORKING DRA...    52   0.025  1
(AC116076) Rattus norvegicus clone CH230-61L11, *** SEQUENCI...    52   0.025  1
(AC115561) Rattus norvegicus clone CH230-308B20, *** SEQUENC...    52   0.025  1
(AC114454) Rattus norvegicus clone CH230-72B12, WORKING DRAF...    52   0.025  1
(AC114353) Rattus norvegicus clone CH230-264B6, WORKING DRAF...    52   0.025  1
(AC114066) Rattus norvegicus clone CH230-199N11, *** SEQUENC...    52   0.025  1
(AC113928) Rattus norvegicus clone CH230-55D8, *** SEQUENCIN...    52   0.025  1
(AC112887) Rattus norvegicus clone CH230-214H3, WORKING DRAF...    52   0.025  1
(AC112116) Rattus norvegicus clone CH230-167B13, *** SEQUENC...    52   0.025  1
(AC110686) Rattus norvegicus clone CH230-197B1, *** SEQUENCI...    52   0.025  1
(AC109569) Rattus norvegicus clone CH230-246B10, WORKING DRA...    52   0.025  1
(AC109524) Rattus norvegicus clone CH230-7F10, WORKING DRAFT...    52   0.025  1
(AC108955) Rattus norvegicus clone CH230-6F10, *** SEQUENCIN...    52   0.025  1
(AC106523) Rattus norvegicus clone CH230-25H15, WORKING DRAF...    52   0.025  1
(AC106510) Rattus norvegicus clone CH230-206E23, WORKING DRA...    52   0.025  1
(AC106480) Rattus norvegicus clone CH230-170I15, *** SEQUENC...    52   0.025  1
(AC106411) Rattus norvegicus clone CH230-82H8, *** SEQUENCIN...    52   0.025  1
(AC106337) Rattus norvegicus clone CH230-55N24, *** SEQUENCI...    52   0.025  1
(AC104401) Rattus norvegicus clone CH230-132A21, *** SEQUENC...    52   0.025  1
(AC103284) Rattus norvegicus clone CH230-125L23, WORKING DRA...    52   0.025  1
(AC103177) Rattus norvegicus clone CH230-99C22, *** SEQUENCI...    52   0.025  1
(AC099432) Rattus norvegicus clone CH230-103G20, *** SEQUENC...    52   0.025  1
(AC098907) Rattus norvegicus clone CH230-174A6, WORKING DRAF...    52   0.025  1
(AC098393) Rattus norvegicus clone CH230-1O24, *** SEQUENCIN...    52   0.025  1
(AC098240) Rattus norvegicus clone CH230-1E19, *** SEQUENCIN...    52   0.025  1
(AC097685) Rattus norvegicus clone CH230-187M8, WORKING DRAF...    52   0.025  1
(AC097233) Rattus norvegicus clone CH230-197F16, *** SEQUENC...    52   0.025  1
(AC097124) Rattus norvegicus clone CH230-22D4, *** SEQUENCIN...    52   0.025  1
(AC097028) Rattus norvegicus clone CH230-93J21, WORKING DRAF...    52   0.025  1
(AC095964) Rattus norvegicus clone CH230-11I21, *** SEQUENCI...    52   0.025  1
(AC095438) Rattus norvegicus clone CH230-4H15, *** SEQUENCIN...    52   0.025  1
(AC094027) Rattus norvegicus clone CH230-33A4, WORKING DRAFT...    52   0.025  1
(AC094026) Rattus norvegicus clone CH230-13M12, WORKING DRAF...    52   0.025  1
(AC084802) Mus musculus strain C57BL6/J chromosome 16 clone ...    52   0.025  1
(CT005263) Leishmania major chromosome 24 strain Friedlin, c...    52   0.025  1
(CR954206) Ostreococcus tauri chromosome 06 contig 1, DNA se...    52   0.025  1
(CR394558) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    52   0.025  1
(AP003671) Mus musculus genomic DNA, chromosome 16q clone:RP...    52   0.025  1
(AC197115) Zea mays chromosome 10 clone CH201-183N2; ZMMBBc0...    52   0.025  1
(AC189950) Macaca mulatta clone CH250-273D15, WORKING DRAFT ...    52   0.025  1
(AC183668) Pan troglodytes chromosome 9 clone CH251-569L21, ...    52   0.025  1
(AC178740) Strongylocentrotus purpuratus clone R3-3002K9, WO...    52   0.025  1
(AC020838) Mus musculus clone RG-MBAC_64K23, LOW-PASS SEQUEN...    52   0.025  1
(AC014118) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    52   0.025  1
(AK078800) Mus musculus 16 days embryo lung cDNA, RIKEN full...    52   0.025  1
(AZ226620) RPCI-23-64N3.TJ RPCI-23 Mus musculus genomic clon...    52   0.025  1
(AQ935224) CpG2216B CpIOWAgDNA1 Cryptosporidium parvum genom...    52   0.025  1
(ET769618) CHO_OF556xb24f1.ab1 CHO_OF Nicotiana tabacum geno...    52   0.025  1
(ET571460) fcg3x.232650j20.f C. graminicola genomic sequence...    52   0.025  1
(ET564726) fcg3x.232450c21 C. graminicola genomic sequence G...    52   0.025  1
(ET536353) fcg3x.228150h07 C. graminicola genomic sequence G...    52   0.025  1
(ET524963) fcg3x.227050d16 C. graminicola genomic sequence G...    52   0.025  1
(ET524020) fcg3x.226750c02.f C. graminicola genomic sequence...    52   0.025  1
(ET487784) fcg2x.pk046.f3 C. graminicola genomic sequence Gl...    52   0.025  1
(EK987587) 1095521154489 Global-Ocean-Sampling_GS-33-01-01-1...    52   0.025  1
(EK762321) 1093017093241 Global-Ocean-Sampling_GS-33-01-01-1...    52   0.025  1
(EK761370) 1093017090937 Global-Ocean-Sampling_GS-33-01-01-1...    52   0.025  1
(EK532414) 1095516013594 Global-Ocean-Sampling_GS-32-01-01-1...    52   0.025  1
(AM677670) Entamoeba terrapinae GSS, clone terra136b03.q1k.        52   0.025  1
(EJ201111) 1092344299627 Global-Ocean-Sampling_GS-27-01-01-1...    52   0.025  1
(EI025946) bb76f06.r Dekkera bruxellensis Random Genomic Lib...    52   0.025  1
(EI016425) bb26f07.r Dekkera bruxellensis Random Genomic Lib...    52   0.025  1
(EF756998) Mus musculus C57BL/6N IST10508A10HMF1 gene trap e...    52   0.025  1
(DX954687) CHORI105-1A11.TV CHORI105.pTARBAC1.3 Trypanosoma ...    52   0.025  1
(DX791115) 2664804 VV07 Ustilago maydis genomic clone 116196...    52   0.025  1
(DX788953) 2624198 VV07 Ustilago maydis genomic clone 115808...    52   0.025  1
(DX787221) 2687438 VV07 Ustilago maydis genomic clone 120452...    52   0.025  1
(DX778698) 2686227 VV07 Ustilago maydis genomic clone 120342...    52   0.025  1
(DX774317) 2686176 VV07 Ustilago maydis genomic clone 120351...    52   0.025  1
(DX762380) 2547910 VV07 Ustilago maydis genomic clone 110812...    52   0.025  1
(DX755275) 2312692 VV03 Ustilago maydis genomic clone 100524...    52   0.025  1
(DX752007) 2117756 VV03 Ustilago maydis genomic clone 896444...    52   0.025  1
(DX748050) 2472739 VV03 Ustilago maydis genomic clone 106813...    52   0.025  1
(DX720944) 2212435 VV03 Ustilago maydis genomic clone 907415...    52   0.025  1
(DX694778) 2511169 VV03 Ustilago maydis genomic clone 107647...    52   0.025  1
(DX690845) 2408649 VV03 Ustilago maydis genomic clone 102557...    52   0.025  1
(DX679308) 2348563 VV03 Ustilago maydis genomic clone 100854...    52   0.025  1
(DX678054) 2306399 VV03 Ustilago maydis genomic clone 100167...    52   0.025  1
(DX659174) 1950872 VV02 Ustilago maydis genomic clone 800464...    52   0.025  1
(DX649653) 1913782 VV02 Ustilago maydis genomic clone 783961...    52   0.025  1
(DX633435) 1929496 VV02 Ustilago maydis genomic clone 797795...    52   0.025  1
(DX617857) 1957836 VV02 Ustilago maydis genomic clone 801535...    52   0.025  1
(AL437858) T7 end of clone BC0AA012A06 of library BC0AA from...    52   0.025  1
(AL413377) T7 end of clone AW0AA024B06 of library AW0AA from...    52   0.025  1
(AL412945) T7 end of clone AW0AA021B07 of library AW0AA from...    52   0.025  1
(AL412624) T7 end of clone AW0AA019A04 of library AW0AA from...    52   0.025  1
(AL409535) T3 end of clone AV0AA015E03 of library AV0AA from...    52   0.025  1
(AL407234) T7 end of clone XAU0AA002B03 of library XAU0AA fr...    52   0.025  1
(AL406818) T3 end of clone AU0AA012D12 of library AU0AA from...    52   0.025  1
(AL398203) T7 end of clone AS0AA007F09 of library AS0AA from...    52   0.025  1
(DH813382) Rattus norvegicus DNA, BAC clone: RNB1-413H18, 5'...    52   0.025  1
(DH771925) Rattus norvegicus DNA, BAC clone: RNB1-357C08, 3'...    52   0.025  1
(DH477911) Monosiga ovata DNA, fosmid clone: MOF-028N07, gen...    52   0.025  1
(CZ639446) OM__Ba0184F20.r OM__Ba Oryza minuta genomic clone...    52   0.025  1
(CZ292387) cp81b02.f Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ290892) cp72e08.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ290231) cp68g03.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ288969) cp61c12.f Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ288201) cp56h09.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ287876) cp55b01.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ284533) cp36b01.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ283230) cp28g02.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ281710) cp18e02.f Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CZ278898) cp02f06.r Candida parapsilosis Random Genomic Lib...    52   0.025  1
(CR156716) Forward strand read from insert in 5'HPRT inserti...    52   0.025  1
(AG483273) Mus musculus molossinus DNA, clone:MSMg01-378G18....    52   0.025  1
(EH730155) CNMM2415.b1_N03.ab1 CNM(LMS) spotted knapweed Cen...    52   0.025  1
(EH403925) EST2047 Schizochytrium cDNA library Schizochytriu...    52   0.025  1
(EH402056) EST0177 Schizochytrium cDNA library Schizochytriu...    52   0.025  1
(EH385941) 905 E. acervulina cDNA from second generation mer...    52   0.025  1
(EH261318) JGI_ACBU4539.fwd ACBU Phakopsora pachyrhizi infec...    52   0.025  1
(EH249717) JGI_ACAC13755.fwd ACAC Phakopsora pachyrhizi TW72...    52   0.025  1
(EH245664) JGI_ACAC11262.fwd ACAC Phakopsora pachyrhizi TW72...    52   0.025  1
(EH242500) JGI_ACAC1307.fwd ACAC Phakopsora pachyrhizi TW72-...    52   0.025  1
(EH239803) JGI_ACAC19544.fwd ACAC Phakopsora pachyrhizi TW72...    52   0.025  1
(EH233410) JGI_ACAC7435.fwd ACAC Phakopsora pachyrhizi TW72-...    52   0.025  1
(EH229243) JGI_ACAC5600.rev ACAC Phakopsora pachyrhizi TW72-...    52   0.025  1
(EH228991) JGI_ACAC5600.fwd ACAC Phakopsora pachyrhizi TW72-...    52   0.025  1
(EH012048) USDA-FP_184987 Lysiphlebus testaceipes adult whol...    52   0.025  1
(EG514677) AYBMB59TF pooled cDNA populations Arabidopsis tha...    52   0.025  1
(EG514460) AYBMB59TR pooled cDNA populations Arabidopsis tha...    52   0.025  1
(EG505642) AYASI65TF pooled cDNA populations Arabidopsis tha...    52   0.025  1
(EE519412) 36RDBRG_UP_039_E12_24JUN2004_088 Brassica rapa 36...    52   0.025  1
(EC848900) HAE00003353 Home-made, regular (lib1_ha) Histiona...    52   0.025  1
(EC834043) TPE00008534 Trimastix pyriformis Non normalized (...    52   0.025  1
(EC795733) RAE00015960 Reclinomonas americana Home made, nor...    52   0.025  1
(EC725995) MJE00008741 Malawimonas jakobiformis Home made (1...    52   0.025  1
(EC692185) JLE00000442 Jakoba libera Company (STANDARD) Jako...    52   0.025  1
(EC368804) G840P313FG22.T0 Oscarella carmela pSport1 Library...    52   0.025  1
(AV529629) Arabidopsis thaliana cDNA clone:APZL42d10R, 5' end.     52   0.025  1
(EB805398) 3479_L05 Botrytis cinerea expressed sequence tags...    52   0.025  1
(EB746728) SPE00002824 Company (LARGE) Spizellomyces punctat...    52   0.025  1
(EB636399) AGENCOURT_54968623 D. mojavensis EST Drosophila m...    52   0.025  1
(EB635071) AGENCOURT_54969036 D. mojavensis EST Drosophila m...    52   0.025  1
(EB311224) CNSN01-F-074262-501 Normalized CNS library (juven...    52   0.025  1
(EB069203) TlanSEQ18294 Thermomyces lanuginosa pBluescript (...    52   0.025  1
(EB065059) TlanSEQ9264 Thermomyces lanuginosa pBluescript (E...    52   0.025  1
(EB065027) TlanSEQ9217 Thermomyces lanuginosa pBluescript (E...    52   0.025  1
(DY972440) CLSM584.b2_O02.ab1 CLS(LMS) lettuce sativa Lactuc...    52   0.025  1
(DY964798) CLSM1555.b1_E05.ab1 CLS(LMS) lettuce sativa Lactu...    52   0.025  1
(DY887275) CeleSEQ3213 Cunninghamella elegans pBluescript (E...    52   0.025  1
(DY807896) CTOX16146.b1_C05.ab1 CTO(XYZ) dandelion Taraxacum...    52   0.025  1
(DW482830) GH_RMIRS_038_E05_R Cotton Normalized Library rand...    52   0.025  1
(DW482829) GH_RMIRS_038_E05_039_F Cotton Normalized Library ...    52   0.025  1
(DW043959) CLLX10772.b1_G05.ab1 CLL(XYZ) lettuce saligna Lac...    52   0.025  1
(DW011691) w14i15_M13F Myzus persicae, tobacco lineage, whol...    52   0.025  1
(DV993422) GQ02793.B3_F02 GQ099: Mixed spruce tissues Picea ...    52   0.025  1
(DV981823) GQ0168.B7_B22 GQ016: Primary, secondary SHOOT -N ...    52   0.025  1
(DV980760) GQ0163.TB_J09 GQ016: Primary, secondary SHOOT -N ...    52   0.025  1
(DV973061) GQ00411.B3_N13 GQ004: Non-lignified secondary xyl...    52   0.025  1
(DV970633) GQ0044.TB_D09 GQ004: Non-lignified secondary xyle...    52   0.025  1
(DT761078) EST1194927 Aquilegia cDNA library Aquilegia formo...    52   0.025  1
(AU269953) Dictyostelium discoideum vegetative cDNA clone:VS...    52   0.025  1
(DR567711) WS02619.BR_K16 WS-PP-N-A-12 Picea glauca cDNA clo...    52   0.025  1
(DR546772) WS0313.B21_P10 WS-MC-A-17 Picea glauca cDNA clone...    52   0.025  1
(DR476152) WS00966.C21_K24 IS-B-N-A-10 Picea engelmannii x P...    52   0.025  1
(DR148484) 49099992 Drosophila pseudoobscura embryonic cDNA ...    52   0.025  1
(DK951143) Adiantum capillus-veneris mRNA, clone: TST38A01NG...    52   0.025  1
(DK948129) Adiantum capillus-veneris mRNA, clone: TST38A01NG...    52   0.025  1
(DC908590) Physcomitrella patens subsp. patens cDNA, clone:p...    52   0.025  1
(AM740855) Cucumis melo subsp. melo EST, clone 46d_19-F06-M13R.    52   0.025  1
(AM739054) Cucumis melo subsp. melo EST, clone 15d_33-A03-M13R.    52   0.025  1
(CX672084) UCRCS10_14H02_b Madame Vinous Sweet Orange Multip...    52   0.025  1
(CV197023) CGF1003507_F09 Seed coat from mid-season walnut e...    52   0.025  1
(CV168313) rsmsxl_009236.y1.scf cDNA Library of Salvia milti...    52   0.025  1
(CV162472) rsmsxl_000387.y1.scf cDNA Library of Salvia milti...    52   0.025  1
(CU867814) Podospora anserina mRNA sequence from clone HH0AB...    52   0.025  1
(CU656212) Quercus robur root EST, clone SSH1PL3E02.               52   0.025  1
(CU566474) Theobroma cacao, mRNA sequence (KZ0ABL4YG21FM1).        52   0.025  1
(CU563349) Spc_7YC11 cDNA clone of Developmental Stages Libr...    52   0.025  1
(CU557781) Spc_16YP15 cDNA clone of Developmental Stages Lib...    52   0.025  1
(CU369123) Microbotryum violaceum EST isolate S.latifolia.         52   0.025  1
(CO233368) WS0055.B21.1_K11 WS-PP-A-6 Picea glauca cDNA clon...    52   0.025  1
(CO231053) WS00113.B21_M20 WS-ES-A-1 Picea glauca cDNA clone...    52   0.025  1
(CO210391) WS00918.B21_B11 IS-B-N-A-10 Picea engelmannii x P...    52   0.025  1
(CO141844) EST836515 Aspergillus flavus Normalized cDNA Expr...    52   0.025  1
(CO141463) EST836134 Aspergillus flavus Normalized cDNA Expr...    52   0.025  1
(CO141357) EST836028 Aspergillus flavus Normalized cDNA Expr...    52   0.025  1
(CO112379) GR__Eb0049A01.r GR__Eb Gossypium raimondii cDNA c...    52   0.025  1
(CN809083) EST0429 Metarhizium anisopliae ARSEF 2575 from be...    52   0.025  1
(CN808891) EST0237 Metarhizium anisopliae ARSEF 2575 from be...    52   0.025  1
(CN246924) EST012810 Mycelium and yeast cells from Paracocci...    52   0.025  1
(CK436199) GQ0042.BR_F04 GQ004: Non-lignified secondary xyle...    52   0.025  1
(CK294887) EST757601 Nicotiana benthamiana mixed tissue cDNA...    52   0.025  1
(CK293951) EST756665 Nicotiana benthamiana mixed tissue cDNA...    52   0.025  1
(CK287713) EST750435 Nicotiana benthamiana mixed tissue cDNA...    52   0.025  1
(CK285974) EST748696 Nicotiana benthamiana mixed tissue cDNA...    52   0.025  1
(CJ056215) Mus musculus adult male bone cDNA, RIKEN full-len...    52   0.025  1
(CJ048882) Mus musculus adult male thymus cDNA, RIKEN full-l...    52   0.025  1
(CF870513) tric023xm17.b1 T.reesei mycelial culture, Version...    52   0.025  1
(CF869757) tric020xf11.b1 T.reesei mycelial culture, Version...    52   0.025  1
(CF867854) tric012xm19.b1 T.reesei mycelial culture, Version...    52   0.025  1
(CF867232) tric010xg18.b1 T.reesei mycelial culture, Version...    52   0.025  1
(CF569196) EST057 Subtracted, Clontech (cat. # K1804-1) Trit...    52   0.025  1
(CD920707) G608.118C06F010910 G608 Triticum aestivum cDNA cl...    52   0.025  1
(CD902924) G356.108I23F010918 G356 Triticum aestivum cDNA cl...    52   0.025  1
(CB900702) tric023xm17 T.reesei mycelial culture, Version 3 ...    52   0.025  1
(CB899903) tric020xf11 T.reesei mycelial culture, Version 3 ...    52   0.025  1
(CB897902) tric012xm19 T.reesei mycelial culture, Version 3 ...    52   0.025  1
(CB897252) tric010xg18 T.reesei mycelial culture, Version 3 ...    52   0.025  1
(CA834039) MCS028B04_153356 Ice plant Lambda Uni-Zap XR expr...    52   0.025  1
(CA833821) MCS027F10_152920 Ice plant Lambda Uni-Zap XR expr...    52   0.025  1
(CA832429) MCS001B10_150136 Ice plant Lambda Uni-Zap XR expr...    52   0.025  1
(CA579285) K0735D01-5N NIA Mouse Hematopoietic Stem Cell (Li...    52   0.025  1
(BY722667) Mus musculus adult male bone cDNA, RIKEN full-len...    52   0.025  1
(BY706450) Mus musculus adult male testis cDNA, RIKEN full-l...    52   0.025  1
(AI736209) sb24h07.y1 Gm-c1008 Glycine max cDNA clone GENOME...    52   0.025  1
(BX838991) Arabidopsis thaliana Full-length cDNA 5PRIM end o...    52   0.025  1
(BX564226) Glossina morsitans morsitans (Tseatse fly) EST fr...    52   0.025  1
(BU965004) sat05c04.y1 Gm-c1036 Glycine max cDNA clone SOYBE...    52   0.025  1
(BU894001) P085G03 Populus petioles cDNA library Populus tre...    52   0.025  1
(BQ622264) fch1c.pk005.j7 Conidiobolus cornatus ARSEF 512 Co...    52   0.025  1
(BM605179) 17000687075984 A.Gam.ad.cDNA.blood1 Anopheles gam...    52   0.025  1
(BJ666904) Eptatretus burgeri leukocyte cDNA clone:hg135l22,...    52   0.025  1
(BJ663969) Eptatretus burgeri leukocyte cDNA clone:hg125k14,...    52   0.025  1
(BJ663934) Eptatretus burgeri leukocyte cDNA clone:hg125i15,...    52   0.025  1
(BJ662688) Eptatretus burgeri leukocyte cDNA clone:hg121g07,...    52   0.025  1
(BJ660101) Eptatretus burgeri leukocyte cDNA clone:hg112p13,...    52   0.025  1
(BJ658165) Eptatretus burgeri leukocyte cDNA clone:hg106l12,...    52   0.025  1
(BJ657087) Eptatretus burgeri leukocyte cDNA clone:hg103d13,...    52   0.025  1
(BJ433666) Dictyostelium discoideum cDNA clone:ddv22g16, 3' ...    52   0.025  1
(BJ425210) Dictyostelium discoideum cDNA clone:ddv55a01, 5' ...    52   0.025  1
(BJ370611) Dictyostelium discoideum cDNA clone:ddc54b22, 5' ...    52   0.025  1
(BJ368172) Dictyostelium discoideum cDNA clone:ddc45g18, 5' ...    52   0.025  1
(BJ367985) Dictyostelium discoideum cDNA clone:ddc44g01, 5' ...    52   0.025  1
(BJ367635) Dictyostelium discoideum cDNA clone:ddc43n09, 5' ...    52   0.025  1
(BJ366368) Dictyostelium discoideum cDNA clone:ddc38p17, 5' ...    52   0.025  1
(BJ364616) Dictyostelium discoideum cDNA clone:ddc32h10, 5' ...    52   0.025  1
(BJ334521) Dictyostelium discoideum cDNA clone:dda46b21, 5' ...    52   0.025  1
(BJ271894) Triticum aestivum cDNA clone:whoh2a18, 3' end, si...    52   0.025  1
(BJ235797) Triticum aestivum cDNA clone:whe18f22, 5' end, si...    52   0.025  1
(BG520889) ps53f07.y1 Trichinella spiralis ML CMVsport jasme...    52   0.025  1
(BB624565) Mus musculus 16 days embryo lung cDNA, RIKEN full...    52   0.025  1
(GE980366) G1219P133RL8.T0 Neurospora crassa cDNA - 7 Days P...    52   0.025  1
(GE538775) CCHS25171.b1_E06.ab1 CCHS Espina Barnadesia spino...    52   0.025  1
(GE473268) GQ00411.B3.r_N13 GQ004: Non-lignified secondary x...    52   0.025  1
(GE071181) 454GmaGlobSeed813829 Soybean Seeds Containing Glo...    52   0.025  1
(GD867151) 454GmaGlobSeed609800 Soybean Seeds Containing Glo...    52   0.025  1
(FL793548) CCGF18185.g1 CCGF Panicum virgatum early floral b...    52   0.025  1
(FL793547) CCGF18185.b1 CCGF Panicum virgatum early floral b...    52   0.025  1
(FL751122) CCGC4534.g1 CCGC Panicum virgatum early floral bu...    52   0.025  1
(FL633106) CATT474.fwd CATT Postia placenta in Avicel medium...    52   0.025  1
(FL622478) CAIN408.fwd CAIN Postia placenta in rich medium P...    52   0.025  1
(FK666785) 454GmaGlobSeed401417 Soybean Seeds Containing Glo...    52   0.025  1
(FK565286) 454GmaGlobSeed299918 Soybean Seeds Containing Glo...    52   0.025  1
(FG500635) 030701KAWC016238HT (KAWC) Actinidia chinensis - a...    52   0.025  1
(FG252086) CBYF411.b1 CBYF Cercospora zeae-maydis conidiatio...    52   0.025  1
(FG241248) SCEG216003C01 TRIPO216 Trypanosoma rangeli cDNA, ...    52   0.025  1
(FG240876) SCEG215003C11 TRIPO215 Trypanosoma rangeli cDNA, ...    52   0.025  1
(FG240822) SCEG215003G08 TRIPO215 Trypanosoma rangeli cDNA, ...    52   0.025  1
(FE849067) CAFO1850.fwd CAFO Pichia stipitis aerobic xylose ...    52   0.025  1
(FE844078) CAFH1710.fwd CAFH Pichia stipitis aerobic dextros...    52   0.025  1
(FE788285) CCAG16019.b5 CCAG Petrolisthes cinctipes heart, g...    52   0.025  1
(FE505833) CAOU13621.fwd CAOU Selaginella moellendorffii mix...    52   0.025  1
(FE505832) CAOU13621.rev CAOU Selaginella moellendorffii mix...    52   0.025  1
(FE477516) CAOS6454.fwd CAOS Selaginella moellendorffii mixe...    52   0.025  1
(FE477515) CAOS6454.rev CAOS Selaginella moellendorffii mixe...    52   0.025  1
(FE234860) CAPG3047.rev CAPG Naegleria gruberi amoeba stage ...    52   0.025  1
(FE048134) LV_ES_RA09D02r Litopenaeus vannamei eyestalk cDNA...    52   0.025  1
(FD762733) Afi06_12_D03_C014.g1 Aristolochia fimbriata mixed...    52   0.025  1
(FD745421) WS04228.C21_M16 SS-NE-27 Picea sitchensis cDNA cl...    52   0.025  1
(FC002342) CATH8442.fwd CATH Sporobolomyces roseus IAM 13481...    52   0.025  1
(EY979321) CATH10747.fwd CATH Sporobolomyces roseus IAM 1348...    52   0.025  1
(EY783503) CR05-C1-103-101-H04-CT.F Mandarin leaf, infected ...    52   0.025  1

>(AU076373) Dictyostelium discoideum slug cDNA, clone SSA665.
          Length = 596

 Score =  533 bits (269), Expect(4) = 0.0
 Identities = 269/269 (100%)
 Strand = Plus / Plus


Query: 167 ggccccaacttgggtaatattgatttttcagaaagtaatagtaacaatacaagtagtaat 226
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ggccccaacttgggtaatattgatttttcagaaagtaatagtaacaatacaagtagtaat 226


Query: 227 aatgaaaacagtaatatacaaacaacagcaacagcaacagcaacagataatgatactcca 286
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aatgaaaacagtaatatacaaacaacagcaacagcaacagcaacagataatgatactcca 286


Query: 287 ataatacaaccaattgagagaccaacagaaccatatcaagagaattttacatcagatatt 346
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ataatacaaccaattgagagaccaacagaaccatatcaagagaattttacatcagatatt 346


Query: 347 gatgatttagttaaaattaatattattcaatcagaaacagtttatcatagaacatttaga 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gatgatttagttaaaattaatattattcaatcagaaacagtttatcatagaacatttaga 406


Query: 407 caatctaaaattttaaaagtttatgattt 435
           |||||||||||||||||||||||||||||
Sbjct: 407 caatctaaaattttaaaagtttatgattt 435

 Score =  303 bits (153), Expect(4) = 0.0
 Identities = 153/153 (100%)
 Strand = Plus / Plus


Query: 443 tatttttatccaaaagaaattcaagataataaaagaattttatttatatataatggtaga 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatttttatccaaaagaaattcaagataataaaagaattttatttatatataatggtaga 502


Query: 503 gcaatgattgataatcaatttttatcaactcatccaaatttattgaatggtgttaatgga 562
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcaatgattgataatcaatttttatcaactcatccaaatttattgaatggtgttaatgga 562


Query: 563 ccgggtttcgttcattgcttaataaaaaatcct 595
           |||||||||||||||||||||||||||||||||
Sbjct: 563 ccgggtttcgttcattgcttaataaaaaatcct 595

 Score =  119 bits (60), Expect(4) = 0.0
 Identities = 60/60 (100%)
 Strand = Plus / Plus


Query: 60  ggagtagaccaggtacacaatttttatcatatcttagtggttcaagaaatggaagtagct 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  ggagtagaccaggtacacaatttttatcatatcttagtggttcaagaaatggaagtagct 119

 Score =  103 bits (52), Expect(4) = 0.0
 Identities = 52/52 (100%)
 Strand = Plus / Plus


Query: 1  aaattttgattctatcttattcttttcaattattatatctctcatcacattc 52
          ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aaattttgattctatcttattcttttcaattattatatctctcatcacattc 52

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 823,423,492
Number of extensions: 55323291
Number of successful extensions: 5343548
Number of sequences better than 10.0: 5592
Length of query: 595
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 572
Effective length of database: 99,442,330,388
Effective search space: 56881012981936
Effective search space used: 56881012981936
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.30
Homology vs Protein 
Query= Contig-U04444-1 (Contig-U04444-1Q) /CSM_Contig/Contig-U04444-1Q.Seq.d
         (595 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(O13535) RecName: Full=Transposon Ty1-H Gag-Pol polyprotein; Alt...    35   2.1
FJ595093_1(FJ595093|pid:none) Mycoplasma gallopavonis strain ATC...    33   4.6
DQ927305_3(DQ927305|pid:none) Tetrahymena pigmentosa strain UM10...    33   6.0
Z49703_3(Z49703|pid:none) S.cerevisiae chromosome XIII cosmid 97...    33   6.0
(Q92393) RecName: Full=Transposon Ty1-OR Gag-Pol polyprotein; Al...    33   6.0
(Q99337) RecName: Full=Transposon Ty1-NL2 Gag-Pol polyprotein; A...    33   6.0
(Q04670) RecName: Full=Transposon Ty1-MR2 Gag-Pol polyprotein; A...    33   6.0
(Q12490) RecName: Full=Transposon Ty1-BL Gag-Pol polyprotein; Al...    33   6.0
(Q12193) RecName: Full=Transposon Ty1-BR Gag-Pol polyprotein; Al...    33   6.0

>(O13535) RecName: Full=Transposon Ty1-H Gag-Pol polyprotein; AltName:
            Full=Gag-Pol-p199; AltName: Full=Transposon Ty1 TYA-TYB
            polyprotein; AltName: Full=TY1A-TY1B; AltName: Full=p190;
            Contains:   RecName: Full=Capsid protein;
            Short=CA;   AltName: Full=Gag-p45;   AltName: Full=p54;
            Contains:   RecName: Full=Ty1 protease;
            Short=PR;            EC=3.4.23.-;   AltName:
            Full=Pol-p20;   AltName: Full=p23; Contains:   RecName:
            Full=Integrase;            Short=IN;   AltName:
            Full=Pol-p71;   AltName: Full=p90;   AltName: Full=p84;
            Contains:   RecName: Full=Reverse
            transcriptase/ribonuclease H;            Short=RT;
                Short=RT-RH;            EC=2.7.7.49;
            EC=2.7.7.7;            EC=3.1.26.4;   AltName:
            Full=Pol-p63;   AltName: Full=p60;  &S52601(S52601)
            &U00029_12(U00029|pid:none)
          Length = 1793

 Score = 34.7 bits (78), Expect = 2.1
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
 Frame = +2

Query: 290  IQPIERPTEPYQENFTSDIDDLVKINIIQSETVYHRTFRQSKILKVYDLKKYFYPKEIQD 469
            I+PI R T  Y E  T + D   K   IQ+   YH+   Q  ++K +D  +Y+  KEI D
Sbjct: 1263 IKPI-RTTLRYDEAITYNKDIKEKEKYIQA---YHKEVNQLLMMKTWDTDRYYDRKEI-D 1317

Query: 470  NKRI---LFIYN 496
             KR+   +FI+N
Sbjct: 1318 PKRVINSMFIFN 1329

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 606,287,559
Number of extensions: 8906993
Number of successful extensions: 18817
Number of sequences better than 10.0: 9
Number of HSP's gapped: 18815
Number of HSP's successfully gapped: 9
Length of query: 198
Length of database: 1,061,185,681
Length adjustment: 122
Effective length of query: 76
Effective length of database: 662,435,025
Effective search space: 50345061900
Effective search space used: 50345061900
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.75  gvh: 0.67  alm: 0.23  top: 0.67  tms: 0.07  mit: 0.35  mip: 0.08
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.03  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: cytoplasmic
	 24.0 %: mitochondrial
	 24.0 %: nuclear
	  8.0 %: plasma membrane
	  8.0 %: endoplasmic reticulum
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for Contig-U04444-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0