| Contig-U04432-1 |
| Contig ID |
Contig-U04432-1 |
| Contig update |
2001. 8.29 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
600 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
1520578 |
| End point |
1521098 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U04432 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 6.21 |
| Homology vs DNA |
Query= Contig-U04432-1 (Contig-U04432-1Q) /CSM_Contig/Contig-U04432-1Q.Seq.d
(600 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU076329) Dictyostelium discoideum slug cDNA, clone SSA601. 452 0.0 4
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 32 0.002 13
(AC180544) Strongylocentrotus purpuratus clone R3-3016J06, W... 38 0.011 7
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 32 0.017 12
(AC160575) Bos taurus clone CH240-94B23, WORKING DRAFT SEQUE... 52 0.025 1
(AX344565) Sequence 16 from Patent WO0200932. 42 0.039 8
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 40 0.057 8
(CP000361) Arcobacter butzleri RM4018, complete genome. 40 0.069 16
(AC150299) Carollia perspicillata clone 309L9, complete sequ... 44 0.093 4
(CV664148) LCPE04EX020036C03.g Exponential growth phase Leis... 50 0.098 1
(AL672147) Mouse DNA sequence from clone RP23-434N14 on chro... 44 0.15 3
(AC221530) Bos taurus clone CH240-408E23, WORKING DRAFT SEQU... 36 0.18 9
(EJ729239) 1092960032744 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.22 2
(AC168567) Strongylocentrotus purpuratus clone R3-3065P13, W... 38 0.22 2
(AC179991) Strongylocentrotus purpuratus clone R3-17A10, WOR... 38 0.23 2
(BX548071) Zebrafish DNA sequence from clone DKEY-25L23 in l... 46 0.29 5
(AC213540) Populus trichocarpa clone POP053-A08, complete se... 36 0.35 5
(BV485126) S215P6135FA9.T0 Clara Pan troglodytes troglodytes... 48 0.39 1
(BV474828) G591P629027FD5.T0 Clint Pan troglodytes verus STS... 48 0.39 1
(AC113501) Mus musculus chromosome 6, clone RP23-367E20, com... 48 0.39 1
(AC195065) Pan troglodytes BAC clone CH251-604F19 from chrom... 48 0.39 1
(CQ525904) Sequence 57771 from Patent WO0160860. 48 0.39 1
(AL589877) Human DNA sequence from clone RP11-236M5 on chrom... 48 0.39 1
(AC155740) Bos taurus clone CH240-41E19, WORKING DRAFT SEQUE... 48 0.39 1
(AC068703) Homo sapiens chromosome X clone RP11-236M5, WORKI... 48 0.39 1
(AM009688) Bos indicus 3' EST, clone C0007384g21. 48 0.39 1
(AM006552) Bos taurus 5' EST, clone C0007387b16. 48 0.39 1
(AM005700) Bos taurus 3' EST, clone C0007387b16. 48 0.39 1
(BU122158) 603146167F1 CSEQCHL17 Gallus gallus cDNA clone Ch... 48 0.39 1
(EX095546) BR081836 infected leaf cDNA library KFPC Brassica... 48 0.39 1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 48 0.39 1
(AE014849) Plasmodium falciparum 3D7 chromosome 12, section ... 34 0.43 7
(EU028315) Glycine max clone BAC gmw1-9c4 genomic sequence. 40 0.49 7
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 40 0.50 8
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 34 0.57 16
(AE017308) Mycoplasma mobile 163K complete genome. 32 0.62 16
(EJ950267) 1093018940427 Global-Ocean-Sampling_GS-30-02-01-1... 32 0.65 3
(AC198433) Pongo abelii BAC clone CH276-246K6 from chromosom... 46 0.74 5
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.89 8
(AM428701) Vitis vinifera contig VV78X247793.3, whole genome... 40 0.90 3
(AC005507) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 1.0 6
(BX510939) Zebrafish DNA sequence from clone CH211-78C9 in l... 36 1.1 5
(EU028314) Glycine max clone BAC gmw1-6b18 genomic sequence. 40 1.1 7
(AC092076) Oryza sativa chromosome 3 BAC OSJNBb0021G19 genom... 36 1.1 3
(AC187165) Glycine max clone gmw2-91b16, complete sequence. 36 1.1 5
(CP000107) Ehrlichia canis str. Jake, complete genome. 36 1.2 11
(N97869) 1419C3 czapPFDd2.1, Debopam Chakrabarti Plasmodium ... 40 1.2 2
(AM109437) Lutzomyia longipalpis EST clone NSFM-05f04, seque... 38 1.3 2
(AM109438) Lutzomyia longipalpis EST clone SFM-04d03, sequen... 38 1.3 2
(AL954188) Zebrafish DNA sequence from clone DKEY-27J17. 36 1.4 6
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 36 1.4 9
(AC092173) Oryza sativa Japonica Group chromosome 10 clone O... 36 1.4 4
(N97621) 1063C3 czapPFDd2.1, Debopam Chakrabarti Plasmodium ... 40 1.5 2
(BV322865) S236P6538FA11.T0 AlaskanMalamute Canis familiaris... 46 1.5 1
(AC159624) Mus musculus BAC clone RP24-270G2 from chromosome... 46 1.5 1
(AC153790) Mus musculus chromosome 1, clone RP23-424F11, com... 46 1.5 1
(AM452447) Vitis vinifera contig VV78X059877.2, whole genome... 46 1.5 1
(AE014830) Plasmodium falciparum 3D7 chromosome 10 section 2... 46 1.5 1
(AC115354) Rattus norvegicus clone CH230-133D24, WORKING DRA... 46 1.5 1
(AC097987) Rattus norvegicus clone CH230-143J23, *** SEQUENC... 46 1.5 1
(AC097883) Rattus norvegicus clone CH230-76C24, WORKING DRAF... 46 1.5 1
(AC232800) Choloepus hoffmanni clone CH281-649O12, WORKING D... 46 1.5 1
(FH487607) CHO_OF4528xe03r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.5 1
(FH431280) CHO_OF4940xm16f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.5 1
(FH330320) CHO_OF4569xf04r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.5 1
(FH174389) CHO_OF3397xh17f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 1.5 1
(FH052785) CHO_OF3329xo21f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 1.5 1
(EJ754037) 1092963059990 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(EJ752821) 1092963047944 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(EJ511505) 1095407095794 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.5 1
(CT735645) Danio rerio EST, clone ZF_mu_256l17 3'. 46 1.5 1
(CT730852) Danio rerio EST, clone ZF_mu_219k06 3'. 46 1.5 1
(CT730851) Danio rerio EST, clone ZF_mu_219k06 5'. 46 1.5 1
(CP000814) Campylobacter jejuni subsp. jejuni 81116, complet... 46 1.5 1
(CP000768) Campylobacter jejuni subsp. doylei 269.97, comple... 46 1.5 1
(CP000538) Campylobacter jejuni subsp. jejuni 81-176, comple... 46 1.5 1
(CP000025) Campylobacter jejuni RM1221, complete genome. 46 1.5 1
(AL111168) Campylobacter jejuni subsp. jejuni NCTC 11168 com... 46 1.5 1
(AY692273) Borrelia turicatae P-512 gene, complete cds. 40 1.5 2
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome. 36 1.6 18
(AL139107) Human DNA sequence *** SEQUENCING CANCELLED *** f... 36 1.6 5
(CU062520) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 1.7 3
(AC114770) Homo sapiens BAC clone RP11-422D16 from 4, comple... 38 1.8 6
(CP000825) Prochlorococcus marinus str. MIT 9215, complete g... 42 1.8 13
(BX649256) Zebrafish DNA sequence from clone DKEYP-92A5 in l... 36 1.8 6
(CU694863) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 1.9 5
(AY544183) Mycoplasma arthritidis strain 158p10 membrane lip... 40 1.9 2
(AC152204) Bos taurus clone CH240-1H2, WORKING DRAFT SEQUENC... 38 1.9 3
(AY663318) Brachythecium appleyardiae AtpB (atpB) gene, part... 32 1.9 3
(AC133933) Mus musculus BAC clone RP24-333C16 from chromosom... 36 2.1 7
(AC173761) Bos taurus clone CH240-456B17, WORKING DRAFT SEQU... 42 2.2 4
(DQ855265) Glycine max clone BAC GM-WBb0040I14, *** SEQUENCI... 38 2.3 5
(AC182347) Ateles geoffroyi clone UC1-403B11, complete seque... 38 2.3 6
(AC162983) Bos taurus clone CH240-123N19, WORKING DRAFT SEQU... 32 2.3 8
(FP102221) Medicago truncatula chromosome 5 clone mth2-46o24... 36 2.3 4
(AC157474) Mus musculus BAC clone RP24-565B5 from chromosome... 40 2.3 4
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 2.5 9
(CP000033) Lactobacillus acidophilus NCFM, complete genome. 32 2.6 2
(BX248583) Blochmannia floridanus complete genome. 34 2.6 12
(AM652540) Entamoeba moshkovskii FIC GSS, clone mosh119a02.q1k. 42 2.7 2
(AC215434) Solanum lycopersicum chromosome 2 clone C02HBa028... 38 2.7 4
(AM483621) Vitis vinifera contig VV78X079073.3, whole genome... 36 2.7 3
(AC203548) Medicago truncatula clone mth2-108i19, WORKING DR... 36 2.7 6
(EJ893218) 1093018453819 Global-Ocean-Sampling_GS-30-02-01-1... 40 2.8 2
(AC105284) Homo sapiens chromosome 4 clone RP11-1G8, WORKING... 36 2.9 6
(BX324135) Zebrafish DNA sequence from clone DKEY-16J16. 32 2.9 2
(AC170396) Bos taurus clone CH240-215N6, WORKING DRAFT SEQUE... 36 3.0 5
(AC078978) Homo sapiens chromosome 3q clone RP11-567P18, ***... 34 3.0 2
(EJ894779) 1093018461244 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.1 2
(AM453930) Vitis vinifera contig VV78X076699.11, whole genom... 36 3.1 3
(EK373985) 1095469431006 Global-Ocean-Sampling_GS-31-01-01-1... 38 3.3 2
(AC106881) Homo sapiens BAC clone RP11-710C12 from 4, comple... 34 3.3 7
(EJ825553) 1093017558618 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.3 2
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 32 3.3 8
(DQ374024) Beta vulgaris chromosome 9 clone BAC62 genomic se... 40 3.4 3
(ER430531) 1092963775504 Global-Ocean-Sampling_GS-35-01-01-1... 42 3.5 2
(AZ549982) ENTDR31TF Entamoeba histolytica Sheared DNA Entam... 36 3.5 2
(CT025769) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 3.5 5
(AC006702) Caenorhabditis elegans clone Y104H12b, *** SEQUEN... 36 3.6 8
(EJ887957) 1093018427548 Global-Ocean-Sampling_GS-30-02-01-1... 34 3.6 2
(CR855259) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 3.6 6
(AC211077) Solanum lycopersicum chromosome 6 clone C06HBa030... 38 3.8 3
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ... 34 3.8 7
(AC151724) Medicago truncatula clone mth2-78n17, WORKING DRA... 38 4.0 3
(DX455056) MAMAB16TF MA4 Musa acuminata genomic clone MA4-3D... 32 4.0 2
(Z97338) Arabidopsis thaliana DNA chromosome 4, ESSA I FCA c... 38 4.0 7
(BB060422) Mus musculus egg female in vitro fertilized eggs ... 40 4.0 2
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi... 34 4.2 10
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 4.2 9
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 34 4.3 8
(FP104545) Wallaby DNA sequence *** SEQUENCING IN PROGRESS *... 34 4.4 5
(CU210895) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 4.6 5
(AC221537) Bos taurus clone CH240-408H15, WORKING DRAFT SEQU... 36 4.6 6
(AL138810) Human DNA sequence from clone RP1-179L10 on chrom... 32 4.7 7
(AJ298105) Homo sapiens PDX1 gene for lipoyl-containing comp... 32 4.7 7
(ER967099) AF__Bc0001O22f AF__Bc Aquilegia formosa genomic, ... 40 4.7 2
(AC180061) Strongylocentrotus purpuratus clone R3-3030B18, W... 44 4.9 3
(CU856095) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 5.2 7
(CT025735) Mouse DNA sequence from clone RP24-338F19 on chro... 34 5.2 4
(AL358196) Human DNA sequence from clone RP11-596L14 on chro... 36 5.3 6
(AC149669) Bos taurus BAC CH240-57J21 (Children's Hospital ... 36 5.4 6
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 34 5.4 12
(AL646091) Mouse DNA sequence from clone RP23-101K9 on chrom... 42 5.5 5
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 36 5.7 12
(DE448582) Bombyx mori genomic DNA, Fosmid clone:GBMFno40_d0... 36 5.7 2
(BS000108) Pan troglodytes chromosome 22 clone:PTB-237C02, m... 36 6.1 7
(CT027560) Zebrafish DNA sequence from clone DKEY-66G10 in l... 44 6.1 1
(BX005005) Zebrafish DNA sequence from clone DKEY-70O15 in l... 44 6.1 1
(AC136754) Mus musculus chromosome 1, clone RP23-176K16, com... 44 6.1 1
(AC123752) Mus musculus chromosome 1, clone RP24-194N4, comp... 44 6.1 1
(EF533702) Glycine max clone BAC GM_WBb098N11, complete sequ... 44 6.1 1
(AM425205) Vitis vinifera contig VV78X155075.13, whole genom... 44 6.1 1
(AC182655) Populus trichocarpa clone Pop1-121O5, complete se... 44 6.1 1
(AC136954) Medicago truncatula chromosome 8 clone mth2-7i1, ... 44 6.1 1
(AC127169) Medicago truncatula chromosome 8 clone mth2-36n3,... 44 6.1 1
(FB571381) Sequence 248 from Patent EP1865317. 44 6.1 1
(FB571325) Sequence 192 from Patent EP1865317. 44 6.1 1
(BX538350) Cryptosporidium parvum chromosome 6, complete seq... 44 6.1 1
(AF426177) Cryptosporidium parvum inosine-5-monophosphate de... 44 6.1 1
(AC131058) Mus musculus clone RP24-87I11, WORKING DRAFT SEQU... 44 6.1 1
(AC117890) Rattus norvegicus clone CH230-201J23, *** SEQUENC... 44 6.1 1
(AC113786) Rattus norvegicus clone CH230-100C4, WORKING DRAF... 44 6.1 1
(AC109800) Canis lupus familiaris clone RP81-176E1, WORKING ... 44 6.1 1
(AC108297) Rattus norvegicus clone CH230-231A13, *** SEQUENC... 44 6.1 1
(AC095770) Rattus norvegicus clone CH230-9J14, *** SEQUENCIN... 44 6.1 1
(AC095111) Rattus norvegicus clone CH230-7K18, WORKING DRAFT... 44 6.1 1
(CU914216) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(CU855988) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(CU469096) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(CT963120) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(AL929223) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 44 6.1 1
(AC230226) Bos taurus clone CH240-518B17, WORKING DRAFT SEQU... 44 6.1 1
(AC219007) Zea mays chromosome 7 clone ZMMBBb-560O10; ZMMBBb... 44 6.1 1
(AC199387) Zea mays chromosome 10 clone CH201-286A7; ZMMBBc0... 44 6.1 1
(AC195007) Saimiri boliviensis boliviensis clone CH254-279P3... 44 6.1 1
(AC186622) Zea mays chromosome 1 clone CH201-264F21; ZMMBBc0... 44 6.1 1
(AC177335) Strongylocentrotus purpuratus clone R3-46L21, WOR... 44 6.1 1
(AC176779) Strongylocentrotus purpuratus clone R3-3104N9, WO... 44 6.1 1
(AC171596) Bos taurus clone CH240-280A14, WORKING DRAFT SEQU... 44 6.1 1
(FI089437) CHO_OF8218xk13f1.ab1 CHO_OF8 Nicotiana tabacum ge... 44 6.1 1
(FH519543) CHO_OF4716xh01r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 6.1 1
(ET831628) CHO_OF897xp20f1.ab1 CHO_OF Nicotiana tabacum geno... 44 6.1 1
(ER990837) ZMMBHl0001M12.f ZMMBHl Zea mays genomic clone ZMM... 44 6.1 1
(EJ762833) 1092963150302 Global-Ocean-Sampling_GS-30-02-01-1... 44 6.1 1
(EJ759325) 1092963112766 Global-Ocean-Sampling_GS-30-02-01-1... 44 6.1 1
(EJ398155) 1093012015047 Global-Ocean-Sampling_GS-28-01-01-1... 44 6.1 1
(EJ292994) 1095388004761 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.1 1
(EJ141394) 1092343653795 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.1 1
(EJ086640) 1095460112523 Global-Ocean-Sampling_GS-26-01-01-1... 44 6.1 1
(DU451825) 1098415715624 CHORI-243 Ovis aries genomic clone ... 44 6.1 1
(DU156785) OG_ABa0034G17.f OG_ABa Oryza granulata genomic cl... 44 6.1 1
(AJ561426) Cryptosporidium parvum GSS, PAC clone pica_0002_d... 44 6.1 1
(AG988830) Hemicentrotus pulcherrimus BAC clone: BUB1-12F13_... 44 6.1 1
(DE179011) Bombyx mori genomic DNA, Fosmid clone:RO0331-E14_R. 44 6.1 1
(CR340835) mte1-72N6FM1 BAC end, cultivar Jemalong A17 of Me... 44 6.1 1
(AG890326) Oryza sativa Indica Group genomic DNA, BAC end se... 44 6.1 1
(CL676976) PRI011a_D02_2 - PRI011a.BR (857) Mixed stage fosm... 44 6.1 1
(CG752924) P047-4-D02.za Ppa EcoRI BAC Library Pristionchus ... 44 6.1 1
(CC769274) CH240_74C16.TJ CHORI-240 Bos taurus genomic clone... 44 6.1 1
(DY663177) SA_MF_07_E01 SA_MF Senecio aethnensis cDNA 5', mR... 44 6.1 1
(DV552036) 110900b3 Mouse total cornea. Unnormalized Mus mus... 44 6.1 1
(CX487933) JGI_XZG29977.fwd NIH_XGC_tropGas7 Xenopus (Silura... 44 6.1 1
(BF575946) 602132920F1 NIH_MGC_81 Homo sapiens cDNA clone IM... 44 6.1 1
(BE648311) UI-M-BH2.1-apg-f-06-0-UI.r1 NIH_BMAP_M_S3.1 Mus m... 44 6.1 1
(GH606240) G1297P557FF23.T0 C. parvum KSU-1 normalized sporo... 44 6.1 1
(GH604452) G1297P546FP10.T0 C. parvum KSU-1 normalized sporo... 44 6.1 1
(GH603700) G1297P546RC10.T0 C. parvum KSU-1 normalized sporo... 44 6.1 1
(GH602925) G1297P549FE9.T0 C. parvum KSU-1 normalized sporoz... 44 6.1 1
(GH601841) G1297P539FJ10.T0 C. parvum KSU-1 normalized sporo... 44 6.1 1
(GH597805) G1297P534FI22.T0 C. parvum KSU-1 normalized sporo... 44 6.1 1
(GH589747) G1297P59FO23.T0 C. parvum KSU-1 normalized sporoz... 44 6.1 1
(GH587498) G1297P516FC23.T0 C. parvum KSU-1 normalized sporo... 44 6.1 1
(GH582908) G1297P55FO1.T0 C. parvum KSU-1 normalized sporozo... 44 6.1 1
(GE798814) EST_scau_evk_889234 scauevk mixed_tissue Sebastes... 44 6.1 1
(FG042162) CBOU13800.fwd CBOU Phytophthora capsici LT1534 My... 44 6.1 1
(FG042161) CBOU13800.rev CBOU Phytophthora capsici LT1534 My... 44 6.1 1
(FF001424) 210350_1682_2988 Pythium ultimum ESTs Pythium ult... 44 6.1 1
(AW123274) UI-M-BH2.1-apg-f-06-0-UI.s1 NIH_BMAP_M_S3.1 Mus m... 44 6.1 1
(CP001287) Cyanothece sp. PCC 8801, complete genome. 44 6.1 1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 44 6.1 1
(CP000728) Clostridium botulinum F str. Langeland, complete ... 44 6.1 1
(AM422018) Candidatus Phytoplasma australiense complete genome. 32 6.1 13
(AL035477) Plasmodium falciparum MAL4P4. 30 6.3 8
(EA048112) Sequence 3 from patent US 7154021. 32 6.4 8
(EA048111) Sequence 2 from patent US 7154021. 32 6.4 8
(AX196296) Sequence 3 from Patent WO0151627. 32 6.4 8
(AX196295) Sequence 2 from Patent WO0151627. 32 6.4 8
(GP062385) Sequence 3 from patent US 7485770. 32 6.4 8
(GP062384) Sequence 2 from patent US 7485770. 32 6.4 8
(AC200267) Pongo abelii BAC clone CH276-378F1 from chromosom... 34 6.4 5
(AC159591) Dasypus novemcinctus clone VMRC5-435G7, WORKING D... 42 6.4 3
(AC147501) Medicago truncatula chromosome 8 clone mth2-12n2,... 42 6.4 5
(AC200584) Macaca mulatta clone CH250-277I6, WORKING DRAFT S... 36 6.6 5
(DJ386562) Diagnosis of Diseases Associated with Metastasis. 34 6.7 4
(AX281358) Sequence 22 from Patent WO0177376. 34 6.7 4
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 36 6.7 17
(AC186134) Medicago truncatula chromosome 2 BAC clone mte1-1... 42 6.7 5
(FP101882) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 6.8 5
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 32 6.8 11
(AC168495) Strongylocentrotus purpuratus clone R3-3117E17, W... 34 6.9 6
(AP007419) Lotus japonicus genomic DNA, chromosome 5, clone:... 36 7.0 5
(AC176457) Strongylocentrotus purpuratus clone R3-3068N20, W... 32 7.0 6
(AC079086) Homo sapiens chromosome 4 clone RP11-70M19 map 4,... 38 7.0 2
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome. 38 7.2 6
(AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 30 7.4 7
(DQ229107) Chara vulgaris chloroplast, complete genome. 36 7.4 6
(AL606804) Human DNA sequence from clone RP11-978I15 on chro... 40 7.5 6
(AF541963) Glycine max cv Williams 82 BAC clone Gm_ISb001_09... 34 7.6 4
(AC232536) Brassica rapa subsp. pekinensis clone KBrH001F03,... 34 7.7 4
(AC156835) Mus musculus BAC clone RP23-322L4 from chromosome... 36 7.9 5
(DE376793) Bombyx mori genomic DNA, BAC clone:BET_650_B13. 36 8.1 2
(GC801868) Sequence 117113 from patent US 6812339. 34 8.3 2
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 32 8.5 9
(EJ751571) 1092963039863 Global-Ocean-Sampling_GS-30-02-01-1... 38 8.7 2
(AL844506) Plasmodium falciparum chromosome 7. 36 8.8 16
(AC225649) Equus caballus clone CH241-378O15, WORKING DRAFT ... 34 8.9 6
(CV603174) L_AI-aaa09d01.b1 Hc7B_Y Ajellomyces capsulatus cD... 38 8.9 2
(AC008394) Homo sapiens chromosome 5 clone CTC_242N15, compl... 30 9.0 9
(AC156221) Bos taurus clone CH240-49E20, WORKING DRAFT SEQUE... 38 9.1 2
(AC178191) Strongylocentrotus purpuratus clone R3-3082J17, W... 36 9.2 5
(AC161754) Mus musculus BAC clone RP24-446K8 from chromosome... 36 9.4 5
(AL139217) Human DNA sequence *** SEQUENCING CANCELLED *** f... 38 9.6 3
(EK084339) 1092961131344 Global-Ocean-Sampling_GS-31-01-01-1... 36 9.9 2
(DX451795) BE2010_H07_R IASMA L2 HindIII BAC library Vitis v... 40 9.9 2
>(AU076329) Dictyostelium discoideum slug cDNA, clone SSA601.
Length = 601
Score = 452 bits (228), Expect(4) = 0.0
Identities = 228/228 (100%)
Strand = Plus / Plus
Query: 373 cataatttcaaaatagtaaaagaagaaaatattttaccaaaagattctacatcatttgga 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cataatttcaaaatagtaaaagaagaaaatattttaccaaaagattctacatcatttgga 432
Query: 433 tatagggcaactcatattgattcaatatttaatgatttaaaggtcgaaattcaaataaga 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tatagggcaactcatattgattcaatatttaatgatttaaaggtcgaaattcaaataaga 492
Query: 493 actatttttcaagatatatggggacaattgagtcatcaacaatatgaaattgcaagatta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 actatttttcaagatatatggggacaattgagtcatcaacaatatgaaattgcaagatta 552
Query: 553 aatggttatgataatgcccataatttaccaagagatattagtcaaata 600
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aatggttatgataatgcccataatttaccaagagatattagtcaaata 600
Score = 373 bits (188), Expect(4) = 0.0
Identities = 188/188 (100%)
Strand = Plus / Plus
Query: 178 gaggtaccaatgttttacctttataaaggtattgaaggtagagttaaggaaattgagtca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gaggtaccaatgttttacctttataaaggtattgaaggtagagttaaggaaattgagtca 237
Query: 238 atgaatagaaaattggttactaaaaataaacatagttggaaagatgtttctgattattgt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atgaatagaaaattggttactaaaaataaacatagttggaaagatgtttctgattattgt 297
Query: 298 ggtgttcaaattattgttcattcttttaaaaatataaaagaaatcattcatatgttaaat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ggtgttcaaattattgttcattcttttaaaaatataaaagaaatcattcatatgttaaat 357
Query: 358 catttaac 365
||||||||
Sbjct: 358 catttaac 365
Score = 276 bits (139), Expect(4) = 0.0
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 32 tgattaatagttttgtctctacaactaaaaaagttactacctccatcccaacaaatgata 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32 tgattaatagttttgtctctacaactaaaaaagttactacctccatcccaacaaatgata 91
Query: 92 tttttccaattagagaggaatatactgaagatattaggtcaatgcttcaaaataatttaa 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tttttccaattagagaggaatatactgaagatattaggtcaatgcttcaaaataatttaa 151
Query: 152 atcaatttttggaagtggt 170
|||||||||||||||||||
Sbjct: 152 atcaatttttggaagtggt 170
Score = 46.1 bits (23), Expect(4) = 0.0
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 aattataatcaaaacaaattaat 23
|||||||||||||||||||||||
Sbjct: 1 aattataatcaaaacaaattaat 23
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 899,478,619
Number of extensions: 62609627
Number of successful extensions: 5629056
Number of sequences better than 10.0: 267
Length of query: 600
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 577
Effective length of database: 99,442,330,388
Effective search space: 57378224633876
Effective search space used: 57378224633876
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.30 |
| Homology vs Protein |
Query= Contig-U04432-1 (Contig-U04432-1Q) /CSM_Contig/Contig-U04432-1Q.Seq.d
(600 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE009948_1068(AE009948|pid:none) Streptococcus agalactiae 2603V/... 59 1e-07
CP001078_1806(CP001078|pid:none) Clostridium botulinum E3 str. A... 56 9e-07
CP000425_378(CP000425|pid:none) Lactococcus lactis subsp. cremor... 56 9e-07
AM406671_378(AM406671|pid:none) Lactococcus lactis subsp. cremor... 56 9e-07
AE001437_3285(AE001437|pid:none) Clostridium acetobutylicum ATCC... 56 9e-07
CP001056_1636(CP001056|pid:none) Clostridium botulinum B str. Ek... 55 1e-06
AE005176_362(AE005176|pid:none) Lactococcus lactis subsp. lactis... 55 1e-06
AP010935_832(AP010935|pid:none) Streptococcus dysgalactiae subsp... 55 1e-06
AE004092_855(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 55 1e-06
CP001615_2732(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 54 3e-06
CP001022_2006(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 54 3e-06
CP001129_1010(CP001129|pid:none) Streptococcus equi subsp. zooep... 54 4e-06
FM204883_1088(FM204883|pid:none) Streptococcus equi subsp. equi ... 54 4e-06
AE014133_952(AE014133|pid:none) Streptococcus mutans UA159, comp... 54 4e-06
CR954253_851(CR954253|pid:none) Lactobacillus delbrueckii subsp.... 53 6e-06
AM263198_760(AM263198|pid:none) Listeria welshimeri serovar 6b s... 53 6e-06
CP000412_711(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 53 6e-06
CP001015_1006(CP001015|pid:none) Streptococcus pneumoniae G54, c... 53 8e-06
CP000407_1052(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 53 8e-06
CP000724_2097(CP000724|pid:none) Alkaliphilus metalliredigens QY... 53 8e-06
CP000919_981(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 53 8e-06
AM946015_836(AM946015|pid:none) Streptococcus uberis 0140J compl... 52 1e-05
AE005672_1032(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 52 1e-05
CP000725_1187(CP000725|pid:none) Streptococcus gordonii str. Cha... 52 1e-05
AM295250_1945(AM295250|pid:none) Staphylococcus carnosus subsp. ... 52 2e-05
CP000725_480(CP000725|pid:none) Streptococcus gordonii str. Chal... 52 2e-05
A86734(A86734) hypothetical protein yijE [imported] - Lactococcu... 51 2e-05
AP008934_407(AP008934|pid:none) Staphylococcus saprophyticus sub... 51 2e-05
CP000033_1347(CP000033|pid:none) Lactobacillus acidophilus NCFM,... 51 2e-05
CP000462_2934(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 51 3e-05
BX248358_201(BX248358|pid:none) Corynebacterium diphtheriae grav... 51 3e-05
AP006716_570(AP006716|pid:none) Staphylococcus haemolyticus JCSC... 51 3e-05
CP000813_3443(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 50 5e-05
BX571856_2538(BX571856|pid:none) Staphylococcus aureus subsp. au... 50 5e-05
CP001615_302(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 50 5e-05
CP000422_1146(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 50 5e-05
AP008230_3807(AP008230|pid:none) Desulfitobacterium hafniense Y5... 50 5e-05
AP009324_2494(AP009324|pid:none) Staphylococcus aureus subsp. au... 50 5e-05
CP000482_1430(CP000482|pid:none) Pelobacter propionicus DSM 2379... 50 6e-05
CP001638_719(CP001638|pid:none) Geobacillus sp. WCH70, complete ... 50 6e-05
BA000043_829(BA000043|pid:none) Geobacillus kaustophilus HTA426 ... 49 8e-05
AE016877_1074(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 49 8e-05
CP000922_2090(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 49 8e-05
AE017355_1078(AE017355|pid:none) Bacillus thuringiensis serovar ... 49 8e-05
AE015929_2052(AE015929|pid:none) Staphylococcus epidermidis ATCC... 49 8e-05
AE016879_1115(AE016879|pid:none) Bacillus anthracis str. Ames, c... 49 8e-05
CP000387_1707(CP000387|pid:none) Streptococcus sanguinis SK36, c... 49 1e-04
CP000439_1472(CP000439|pid:none) Francisella tularensis subsp. n... 49 1e-04
CP000915_306(CP000915|pid:none) Francisella tularensis subsp. me... 49 1e-04
AM233362_285(AM233362|pid:none) Francisella tularensis subsp. ho... 49 1e-04
CP000437_230(CP000437|pid:none) Francisella tularensis subsp. ho... 49 1e-04
CP000425_855(CP000425|pid:none) Lactococcus lactis subsp. cremor... 49 1e-04
CP001175_1806(CP001175|pid:none) Listeria monocytogenes HCC23, c... 49 1e-04
AE016879_4222(AE016879|pid:none) Bacillus anthracis str. Ames, c... 48 2e-04
CP001108_67(CP001108|pid:none) Prosthecochloris aestuarii DSM 27... 48 2e-04
AE001437_632(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 48 2e-04
AM270244_72(AM270244|pid:none) Aspergillus niger contig An11c027... 48 2e-04
U89914_10(U89914|pid:none) Bacillus pseudofirmus hypothetical K+... 48 2e-04
AB1175(AB1175) GTP-pyrophosphokinase homolog lmo0802 [imported] ... 48 2e-04
AE009948_1291(AE009948|pid:none) Streptococcus agalactiae 2603V/... 47 3e-04
CP001176_4299(CP001176|pid:none) Bacillus cereus B4264, complete... 47 4e-04
A84006(A84006) GTP pyrophosphokinase BH2849 [imported] - Bacillu... 47 4e-04
AP006840_1636(AP006840|pid:none) Symbiobacterium thermophilum IA... 47 4e-04
CR936503_1441(CR936503|pid:none) Lactobacillus sakei strain 23K ... 47 5e-04
AP009044_1275(AP009044|pid:none) Corynebacterium glutamicum R DN... 47 5e-04
BA000028_1220(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 47 5e-04
DQ489736_1170(DQ489736|pid:none) Leuconostoc citreum KM20, compl... 47 5e-04
AP006627_2512(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 47 5e-04
CP000903_4084(CP000903|pid:none) Bacillus weihenstephanensis KBA... 46 7e-04
AE017194_4390(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 46 0.001
CP000813_1073(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 45 0.001
CP000728_178(CP000728|pid:none) Clostridium botulinum F str. Lan... 45 0.002
AE016830_2492(AE016830|pid:none) Enterococcus faecalis V583, com... 45 0.002
CP001186_4371(CP001186|pid:none) Bacillus cereus G9842, complete... 45 0.002
AE004092_648(AE004092|pid:none) Streptococcus pyogenes M1 GAS, c... 45 0.002
CP000155_6041(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 45 0.002
BA000016_654(BA000016|pid:none) Clostridium perfringens str. 13 ... 45 0.002
AM412317_183(AM412317|pid:none) Clostridium botulinum A str. ATC... 45 0.002
AM180355_353(AM180355|pid:none) Clostridium difficile 630 comple... 45 0.002
CP001615_688(CP001615|pid:none) Exiguobacterium sp. AT1b, comple... 45 0.002
CP000416_1393(CP000416|pid:none) Lactobacillus brevis ATCC 367, ... 45 0.002
AE016822_1910(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 45 0.002
CP000471_349(CP000471|pid:none) Magnetococcus sp. MC-1, complete... 44 0.003
CP001124_1385(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 44 0.003
AE014133_839(AE014133|pid:none) Streptococcus mutans UA159, comp... 44 0.003
AP008955_3030(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 44 0.003
AP006627_2530(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 44 0.003
CP000003_696(CP000003|pid:none) Streptococcus pyogenes MGAS10394... 44 0.004
CP000259_734(CP000259|pid:none) Streptococcus pyogenes MGAS9429,... 44 0.004
CP000853_1174(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 44 0.004
CP000817_3709(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 44 0.004
CP001078_895(CP001078|pid:none) Clostridium botulinum E3 str. Al... 44 0.004
CP000382_479(CP000382|pid:none) Clostridium novyi NT, complete g... 44 0.005
AP008937_560(AP008937|pid:none) Lactobacillus fermentum IFO 3956... 43 0.006
CP001114_988(CP001114|pid:none) Deinococcus deserti VCD115, comp... 43 0.006
AE017226_1698(AE017226|pid:none) Treponema denticola ATCC 35405,... 43 0.006
AP008955_4368(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 43 0.006
AE015927_261(AE015927|pid:none) Clostridium tetani E88, complete... 43 0.006
EF471969_1(EF471969|pid:none) Lactobacillus reuteri RelA/SpoT do... 43 0.006
EU086054_2(EU086054|pid:none) Acinetobacter venetianus short cha... 43 0.008
CP001392_1853(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 42 0.010
CP001056_965(CP001056|pid:none) Clostridium botulinum B str. Ekl... 42 0.010
AL009126_1195(AL009126|pid:none) Bacillus subtilis subsp. subtil... 42 0.010
AE000513_1597(AE000513|pid:none) Deinococcus radiodurans R1 chro... 42 0.013
CP001106_123(CP001106|pid:none) Eubacterium eligens ATCC 27750 p... 42 0.013
AM181176_1559(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 42 0.013
CP000413_1299(CP000413|pid:none) Lactobacillus gasseri ATCC 3332... 42 0.013
BA000016_1938(BA000016|pid:none) Clostridium perfringens str. 13... 42 0.017
CP000382_944(CP000382|pid:none) Clostridium novyi NT, complete g... 42 0.017
CP000412_462(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 42 0.017
CP001628_2113(CP001628|pid:none) Micrococcus luteus NCTC 2665, c... 42 0.017
AE016827_1736(AE016827|pid:none) Mannheimia succiniciproducens M... 42 0.017
CP000312_1863(CP000312|pid:none) Clostridium perfringens SM101, ... 42 0.017
CP001106_486(CP001106|pid:none) Eubacterium eligens ATCC 27750 p... 41 0.023
CP000492_1993(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 41 0.023
CP000246_2142(CP000246|pid:none) Clostridium perfringens ATCC 13... 41 0.023
CP000853_706(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 41 0.023
AE015450_186(AE015450|pid:none) Mycoplasma gallisepticum strain ... 41 0.023
CP000422_1573(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 41 0.023
CR954253_568(CR954253|pid:none) Lactobacillus delbrueckii subsp.... 41 0.023
CR543861_2766(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 41 0.030
CP000033_615(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 41 0.030
CP000724_2264(CP000724|pid:none) Alkaliphilus metalliredigens QY... 41 0.030
B83805(B83805) GTP pyrophosphokinase (stringent response) relA [... 41 0.030
CP000252_1603(CP000252|pid:none) Syntrophus aciditrophicus SB, c... 40 0.039
CP001638_2263(CP001638|pid:none) Geobacillus sp. WCH70, complete... 40 0.039
BA000043_2578(BA000043|pid:none) Geobacillus kaustophilus HTA426... 40 0.039
AF242653_1(AF242653|pid:none) Bacillus stearothermophilus ppGpp ... 40 0.039
FM177140_969(FM177140|pid:none) Lactobacillus casei BL23 complet... 40 0.039
AM711867_146(AM711867|pid:none) Clavibacter michiganensis subsp.... 40 0.051
CP000423_835(CP000423|pid:none) Lactobacillus casei ATCC 334, co... 40 0.051
CP000386_1321(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 40 0.051
AL935252_245(AL935252|pid:none) Lactobacillus plantarum strain W... 40 0.066
AP009256_1033(AP009256|pid:none) Bifidobacterium adolescentis AT... 40 0.066
CP000605_275(CP000605|pid:none) Bifidobacterium longum DJO10A, c... 40 0.066
CP001095_903(CP001095|pid:none) Bifidobacterium longum subsp. in... 40 0.066
CP001087_2418(CP001087|pid:none) Desulfobacterium autotrophicum ... 39 0.086
AE015929_695(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 39 0.086
CP000922_721(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 39 0.086
AP006716_1952(AP006716|pid:none) Staphylococcus haemolyticus JCS... 39 0.086
AP009324_1001(AP009324|pid:none) Staphylococcus aureus subsp. au... 39 0.086
AL009126_2863(AL009126|pid:none) Bacillus subtilis subsp. subtil... 39 0.11
AE017194_4456(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 39 0.11
AP008971_1197(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 39 0.11
CP000806_27(CP000806|pid:none) Cyanothece sp. ATCC 51142 circula... 39 0.15
CP001281_3833(CP001281|pid:none) Thauera sp. MZ1T, complete geno... 39 0.15
BX571965_1149(BX571965|pid:none) Burkholderia pseudomallei strai... 38 0.19
AE016877_4204(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 38 0.19
AB051847_2(AB051847|pid:none) Listeria monocytogenes apt, rel, O... 38 0.25
CP000885_544(CP000885|pid:none) Clostridium phytofermentans ISDg... 38 0.25
CP001175_1027(CP001175|pid:none) Listeria monocytogenes HCC23, c... 38 0.25
AC1265(AC1265) (p)ppGpp synthetase homolog relA [imported] - Lis... 38 0.25
AE017355_4097(AE017355|pid:none) Bacillus thuringiensis serovar ... 38 0.25
AE016879_4282(AE016879|pid:none) Bacillus anthracis str. Ames, c... 38 0.25
AM263198_1536(AM263198|pid:none) Listeria welshimeri serovar 6b ... 38 0.25
CP000323_376(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 38 0.25
CP001056_1498(CP001056|pid:none) Clostridium botulinum B str. Ek... 37 0.33
AF496188_1(AF496188|pid:none) Lactobacillus delbrueckii subsp. l... 37 0.33
CP000962_1666(CP000962|pid:none) Clostridium botulinum A3 str. L... 37 0.33
CP001110_2198(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 37 0.33
CP001078_1408(CP001078|pid:none) Clostridium botulinum E3 str. A... 37 0.33
CP001581_1704(CP001581|pid:none) Clostridium botulinum A2 str. K... 37 0.33
CP001100_504(CP001100|pid:none) Chloroherpeton thalassium ATCC 3... 37 0.33
CP000509_4565(CP000509|pid:none) Nocardioides sp. JS614, complet... 37 0.33
CP000777_2204(CP000777|pid:none) Leptospira biflexa serovar Pato... 37 0.33
CP000724_3555(CP000724|pid:none) Alkaliphilus metalliredigens QY... 37 0.43
CP000512_2446(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 37 0.43
CP000721_4699(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 37 0.43
CP001634_1907(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 37 0.43
CP000721_4520(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 37 0.43
AP008230_1259(AP008230|pid:none) Desulfitobacterium hafniense Y5... 37 0.43
CP000492_1958(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 37 0.43
AE017245_363(AE017245|pid:none) Mycoplasma synoviae 53, complete... 37 0.56
AP009049_3184(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 37 0.56
CP000673_3075(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 37 0.56
AE009951_1502(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 36 0.73
CP001601_595(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 36 0.73
CP000721_1300(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 36 0.73
AP009484_428(AP009484|pid:none) Macrococcus caseolyticus JCSC540... 36 0.73
CP001099_406(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 36 0.95
CP001087_1218(CP001087|pid:none) Desulfobacterium autotrophicum ... 36 0.95
CP001176_57(CP001176|pid:none) Bacillus cereus B4264, complete g... 36 0.95
AE016877_55(AE016877|pid:none) Bacillus cereus ATCC 14579, compl... 36 0.95
AE008691_1108(AE008691|pid:none) Thermoanaerobacter tengcongensi... 35 1.2
CP000263_76(CP000263|pid:none) Buchnera aphidicola str. Cc (Cina... 35 1.2
CP000312_1385(CP000312|pid:none) Clostridium perfringens SM101, ... 35 1.2
CP001620_733(CP001620|pid:none) Corynebacterium kroppenstedtii D... 35 1.2
CP000916_1855(CP000916|pid:none) Thermotoga neapolitana DSM 4359... 35 1.2
AY714836_47(AY714836|pid:none) Uncultured archaeon GZfos23H9 clo... 35 1.2
AE000512_717(AE000512|pid:none) Thermotoga maritima MSB8, comple... 35 1.2
CP001186_57(CP001186|pid:none) Bacillus cereus G9842, complete g... 35 1.6
CP001145_854(CP001145|pid:none) Coprothermobacter proteolyticus ... 35 1.6
CP000378_833(CP000378|pid:none) Burkholderia cenocepacia AU 1054... 35 1.6
AE017333_2764(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 35 1.6
CP000485_55(CP000485|pid:none) Bacillus thuringiensis str. Al Ha... 35 1.6
AE017225_57(AE017225|pid:none) Bacillus anthracis str. Sterne, c... 35 1.6
AE017194_60(AE017194|pid:none) Bacillus cereus ATCC 10987, compl... 35 1.6
AE016879_58(AE016879|pid:none) Bacillus anthracis str. Ames, com... 35 1.6
AM910996_474(AM910996|pid:none) Plasmodium knowlesi strain H chr... 35 1.6
CP001103_111(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 35 2.1
AP008955_1882(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 35 2.1
CP001072_568(CP001072|pid:none) Helicobacter pylori Shi470, comp... 35 2.1
AE005674_2728(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 34 2.8
CP000509_2147(CP000509|pid:none) Nocardioides sp. JS614, complet... 34 2.8
AM180355_788(AM180355|pid:none) Clostridium difficile 630 comple... 34 2.8
AF250284_266(AF250284|pid:none) Amsacta moorei entomopoxvirus, c... 34 2.8
AE017340_645(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 34 2.8
CP000969_196(CP000969|pid:none) Thermotoga sp. RQ2, complete gen... 34 3.6
AE001437_2244(AE001437|pid:none) Clostridium acetobutylicum ATCC... 34 3.6
CP000246_1817(CP000246|pid:none) Clostridium perfringens ATCC 13... 34 3.6
CP000304_2611(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 34 3.6
CP000241_761(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 34 3.6
CP000264_3432(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 34 3.6
CP000382_1346(CP000382|pid:none) Clostridium novyi NT, complete ... 34 3.6
AF288092_17(AF288092|pid:none) Naegleria gruberi mitochondrial D... 34 3.6
CP000261_923(CP000261|pid:none) Streptococcus pyogenes MGAS2096,... 34 3.6
CP001341_180(CP001341|pid:none) Arthrobacter chlorophenolicus A6... 34 3.6
CR931997_777(CR931997|pid:none) Corynebacterium jeikeium K411 co... 34 3.6
CP001124_3177(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 34 3.6
CP001016_1404(CP001016|pid:none) Beijerinckia indica subsp. indi... 34 3.6
AM412317_3068(AM412317|pid:none) Clostridium botulinum A str. AT... 34 3.6
CP000728_2968(CP000728|pid:none) Clostridium botulinum F str. La... 34 3.6
AX064771_1(AX064771|pid:none) Sequence 1053 from Patent WO010084... 34 3.6
(P05707) RecName: Full=Sorbitol-6-phosphate 2-dehydrogenase; ... 33 4.7
J02708_4(J02708|pid:none) E.coli glucitol (gut) operon: glucitol... 33 4.7
BA000016_1605(BA000016|pid:none) Clostridium perfringens str. 13... 33 4.7
AP009240_2953(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 33 4.7
(P64833) RecName: Full=Uncharacterized protein Rv1366/MT1412; &... 33 4.7
EU433563_1(EU433563|pid:none) Escherichia coli strain DH5alpha g... 33 4.7
CP001063_2725(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 33 4.7
CP000970_2735(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 33 4.7
CR380957_106(CR380957|pid:none) Candida glabrata strain CBS138 c... 33 4.7
CP000802_2684(CP000802|pid:none) Escherichia coli HS, complete g... 33 4.7
AM946981_2520(AM946981|pid:none) Escherichia coli BL21, complete... 33 4.7
A98074(A98074) glucitol (sorbitol)-6-phosphate dehydrogenase [im... 33 4.7
AE014075_3183(AE014075|pid:none) Escherichia coli CFT073, comple... 33 4.7
CP000962_3044(CP000962|pid:none) Clostridium botulinum A3 str. L... 33 4.7
CP000432_287(CP000432|pid:none) Rhodococcus jostii RHA1 plasmid ... 33 4.7
CP000036_2606(CP000036|pid:none) Shigella boydii Sb227, complete... 33 6.2
CP000361_625(CP000361|pid:none) Arcobacter butzleri RM4018, comp... 33 6.2
AE011190_186(AE011190|pid:none) Bacillus anthracis str. A2012 pl... 33 6.2
CP001108_1772(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 33 8.1
AE001437_1952(AE001437|pid:none) Clostridium acetobutylicum ATCC... 33 8.1
AM910994_637(AM910994|pid:none) Plasmodium knowlesi strain H chr... 33 8.1
AL844506_47(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 33 8.1
AM412317_2726(AM412317|pid:none) Clostridium botulinum A str. AT... 33 8.1
(P38838) RecName: Full=DNA damage response protein WSS1; AltName... 33 8.1
EF085890_1(EF085890|pid:none) Picea sitchensis clone WS0282_C02 ... 33 8.1
>AE009948_1068(AE009948|pid:none) Streptococcus agalactiae 2603V/R,
complete genome. &AE014242_5(AE014242|pid:none)
&AL766849_24(AL766849|pid:none)
&CP000114_1074(CP000114|pid:none)
Length = 223
Score = 58.5 bits (140), Expect = 1e-07
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Frame = +1
Query: 208 IEGRVKEIESMNRKLVTKN---KHSWKDVSDYCGVQIIVHSFKNIKEIIHMLNHLTKKHN 378
+ GRVK +ES+ K+V + ++ +D+ D G++I+V ++ E++ +L K+H+
Sbjct: 42 VTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLR---KRHD 98
Query: 379 FKIVKEENILPKDSTSFGYRATHI------DSIFNDLKV--EIQIRTIFQDIWGQLSHQQ 534
+V+E + + +S GYR+ H+ D+I KV EIQIRT+ + W + H
Sbjct: 99 MTVVQERDYITHMKSS-GYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHS- 156
Query: 535 YEIARLNGYDNAHNLPRDISQ 597
LN Y + P +I Q
Sbjct: 157 -----LN-YKYQGDFPEEIKQ 171
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 885,827,988
Number of extensions: 17003130
Number of successful extensions: 41976
Number of sequences better than 10.0: 248
Number of HSP's gapped: 41920
Number of HSP's successfully gapped: 248
Length of query: 200
Length of database: 1,061,185,681
Length adjustment: 122
Effective length of query: 78
Effective length of database: 662,435,025
Effective search space: 51669931950
Effective search space used: 51669931950
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |