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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04374-1
Contig ID Contig-U04374-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04374-1 (Contig-U04374-1Q) /CSM_Contig/Contig-U04374-1Q.Seq.d
AAAAAAAATAAAAAAAATAAAATAAAATGAAAATGGAATTAAAAAAAAAA
AATAATAAAAACAATAATTTTAAAAATAAAGAAAATGATATAAATGAAAT
CCCTTTAGCTAATCAAGTAATATTCACAAATTCTAATAATAAATCAGTAA
TAATATCCAATCAAGAAACTCATTTTAAACAAGAGGTATTAGTTTCANCA
ATTNTAGNGGATGATGAAAATGAAATTAAAAATGNAAATAATAAAAATGN
AAAAGAAACTGAAAAATTNAAAATATTGGAAAGNGATCAGATTCTGGAAT
TAGNGTCNCCAAAAGATGAAGATTTAAATGAAGCTGATTATATTGAAAAG
GNTGGATATTCAATAATTTCTTTAGATCAAAATGATGGAAANGATTTTAA
AAAACAATCCTTTTTTAAAAGATTTTTTTGTTTTGGATAAAAAAAAAAAA
AAAAAAAAAAAAAAAAANGAAACCCCCAAGTGTATAAAAGTAAAATTTCT
TTTAGAAAAAAGAAAAAAAAAAAAAAAAAAAAAGAAAAATAAATGCAAAC
ATTAATACAGTTTATGCATAATATTTAATAAAGATTATTATTATTATTAT
TTTTTTTTTTTAAATTTAAAAAA
Gap no gap
Contig length 623
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3070458
End point 3069835
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U04374
List of clone(s) 

est1=SSA364E,1,624
Translated Amino Acid sequence 
kk*kk*NKMKMELKKKNNKNNNFKNKENDINEIPLANQVIFTNSNNKSVIISNQETHFKQ
EVLVSXIXXDDENEIKNXNNKNXKETEKXKILEXDQILELXSPKDEDLNEADYIEKXGYS
IISLDQNDGXDFKKQSFFKRFFCFG*kkkkkkkkkxnpqvykskisfrkkkkkkkkkek*
mqtliqfmhni**rlllllffffkfkk
Translated Amino Acid sequence (All Frames) 
Frame A:
kknkknkik*kwn*kkkiiktiilkikkmi*mksl*lik*ysqiliinq**ypikkliln
kry*fxqx*xmmkmklkmxiikmxkklknxkywkxirfwn*xxqkmki*mkliilkrxdi
q*fl*ikmmexilknnpflkdffvldkkkkkkkkkxetpkcikvkfllekrkkkkkkkkn
kckh*yslciifnkdyyyyyffflnlk


Frame B:
kkikkik*nengikkkk**kq*f*k*rk*yk*npfs*ssnihkf***isnniqsrnsf*t
rgisfxnxxg**k*n*kxk**kxkrn*kixnigkxsdsgixvxkr*rfk*s*ly*kgwif
nnffrsk*wkxf*ktilf*kiflfwikkkkkkkkkxkppsv*k*nff*kkekkkkkkrki
nanintvya*ylikiiiiiifff*i*k


Frame C:
kk*kk*NKMKMELKKKNNKNNNFKNKENDINEIPLANQVIFTNSNNKSVIISNQETHFKQ
EVLVSXIXXDDENEIKNXNNKNXKETEKXKILEXDQILELXSPKDEDLNEADYIEKXGYS
IISLDQNDGXDFKKQSFFKRFFCFG*kkkkkkkkkxnpqvykskisfrkkkkkkkkkek*
mqtliqfmhni**rlllllffffkfkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U04374-1 (Contig-U04374-1Q)
/CSM_Contig/Contig-U04374-1Q.Seq.d
         (623 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04374-1 (Contig-U04374-1Q) /CSM_Contig/Conti...   242  4e-64
Contig-U13463-1 (Contig-U13463-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U12378-1 (Contig-U12378-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U12128-1 (Contig-U12128-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U11697-1 (Contig-U11697-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U10403-1 (Contig-U10403-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U06990-1 (Contig-U06990-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U14340-1 (Contig-U14340-1Q) /CSM_Contig/Conti...    36  0.044
Contig-U13168-1 (Contig-U13168-1Q) /CSM_Contig/Conti...    34  0.17

>Contig-U04374-1 (Contig-U04374-1Q) /CSM_Contig/Contig-U04374-1Q.Seq.d
          Length = 623

 Score =  242 bits (122), Expect = 4e-64
 Identities = 137/137 (100%)
 Strand = Plus / Plus

                                                                       
Query: 274 tattggaaagngatcagattctggaattagngtcnccaaaagatgaagatttaaatgaag 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tattggaaagngatcagattctggaattagngtcnccaaaagatgaagatttaaatgaag 333

                                                                       
Query: 334 ctgattatattgaaaaggntggatattcaataatttctttagatcaaaatgatggaaang 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgattatattgaaaaggntggatattcaataatttctttagatcaaaatgatggaaang 393

                            
Query: 394 attttaaaaaacaatcc 410
           |||||||||||||||||
Sbjct: 394 attttaaaaaacaatcc 410


 Score =  208 bits (105), Expect = 5e-54
 Identities = 114/114 (100%)
 Strand = Plus / Plus

                                                                       
Query: 100 tccctttagctaatcaagtaatattcacaaattctaataataaatcagtaataatatcca 159
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 tccctttagctaatcaagtaatattcacaaattctaataataaatcagtaataatatcca 159

                                                                 
Query: 160 atcaagaaactcattttaaacaagaggtattagtttcancaattntagnggatg 213
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atcaagaaactcattttaaacaagaggtattagtttcancaattntagnggatg 213


 Score =  119 bits (60), Expect = 4e-27
 Identities = 60/60 (100%)
 Strand = Plus / Plus

                                                                       
Query: 540 taaatgcaaacattaatacagtttatgcataatatttaataaagattattattattatta 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 taaatgcaaacattaatacagtttatgcataatatttaataaagattattattattatta 599


 Score = 73.8 bits (37), Expect = 2e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 469 gaaacccccaagtgtataaaagtaaaatttcttttag 505
           |||||||||||||||||||||||||||||||||||||
Sbjct: 469 gaaacccccaagtgtataaaagtaaaatttcttttag 505


>Contig-U13463-1 (Contig-U13463-1Q) /CSM_Contig/Contig-U13463-1Q.Seq.d
          Length = 141

 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 578 ataaagattattattatta 596
           |||||||||||||||||||
Sbjct: 19  ataaagattattattatta 1


>Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Contig-U13062-1Q.Seq.d
          Length = 655

 Score = 38.2 bits (19), Expect = 0.011
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 581 aagattattattattatta 599
           |||||||||||||||||||
Sbjct: 527 aagattattattattatta 509


 Score = 32.2 bits (16), Expect = 0.68
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 584 attattattattatta 599
           ||||||||||||||||
Sbjct: 518 attattattattatta 503


 Score = 32.2 bits (16), Expect = 0.68
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 583 gattattattattatt 598
           ||||||||||||||||
Sbjct: 558 gattattattattatt 543


 Score = 32.2 bits (16), Expect = 0.68
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 584 attattattattatta 599
           ||||||||||||||||
Sbjct: 521 attattattattatta 506


 Score = 32.2 bits (16), Expect = 0.68
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                           
Query: 584 attattattattatta 599
           ||||||||||||||||
Sbjct: 515 attattattattatta 500


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,131
Number of Sequences: 6905
Number of extensions: 24131
Number of successful extensions: 10677
Number of sequences better than 10.0: 1526
length of query: 623
length of database: 5,674,871
effective HSP length: 16
effective length of query: 607
effective length of database: 5,564,391
effective search space: 3377585337
effective search space used: 3377585337
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.18
Homology vs DNA 
Query= Contig-U04374-1 (Contig-U04374-1Q) /CSM_Contig/Contig-U04374-1Q.Seq.d
         (623 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C83844) Dictyostelium discoideum slug cDNA, clone SSA364.        145   4e-64  3
(AU072600) Dictyostelium discoideum slug cDNA, clone SSA364.      210   5e-50  1
(AM447306) Vitis vinifera contig VV78X221253.4, whole genome...    56   0.002  1
(EI458029) PV_GBa0060F17.f PV_GBa Phaseolus vulgaris genomic...    46   0.014  2
(BX649350) Zebrafish DNA sequence from clone CH211-161F1 in ...    52   0.026  1
(BX005210) Zebrafish DNA sequence from clone DKEY-222F8 in l...    52   0.026  1
(BX000468) Zebrafish DNA sequence from clone DKEY-1J5 in lin...    52   0.026  1
(DV148561) CV03077A1D08.f1 CV03-normalized library Euphorbia...    48   0.056  2
(ER678363) SB_BBc13-D17.F SB_BBc Sorghum bicolor genomic 5',...    50   0.10   1
(EI983307) SB_BBc235-L07.R SB_BBc Sorghum bicolor genomic 3'...    50   0.10   1
(EI695139) SB_BBd05-J09.F SB_BBd Sorghum bicolor genomic 5',...    50   0.10   1
(EI694502) SB_BBd14-O06.R SB_BBd Sorghum bicolor genomic 3',...    50   0.10   1
(CW943021) TcB24.3_H05_T7 Tribolium BAC library Tribolium ca...    50   0.10   1
(CW513613) 115_4_10511785_1_30021 Sorghum unfiltered library...    50   0.10   1
(CW379624) fsbb001f058p18f0 Sorghum methylation filtered lib...    50   0.10   1
(CW348841) fsbb001f009g11f0 Sorghum methylation filtered lib...    50   0.10   1
(CW173631) 104_585_11156951_148_36550_090 Sorghum methylatio...    50   0.10   1
(CW173630) 104_585_11156951_116_36549_090 Sorghum methylatio...    50   0.10   1
(CW145777) 104_538_11138644_116_34977_008 Sorghum methylatio...    50   0.10   1
(CL180117) 104_389_10895771_148_31907_299 Sorghum methylatio...    50   0.10   1
(CL180116) 104_389_10895771_116_31908_299 Sorghum methylatio...    50   0.10   1
(BH954069) odi39f07.g1 B.oleracea002 Brassica oleracea genom...    50   0.10   1
(BH577973) BOHEM32TR BOHE Brassica oleracea genomic clone BO...    50   0.10   1
(EH256197) JGI_ACAC1948.rev ACAC Phakopsora pachyrhizi TW72-...    50   0.10   1
(CU914733) H.numata DNA sequence from clone AEHN-38C19.            46   0.38   4
(CU928071) Zebrafish DNA sequence from clone CH73-379C5.           48   0.40   1
(BX465211) Zebrafish DNA sequence from clone CH211-142D23 in...    48   0.40   1
(AY383480) Lateolabrax japonicus IL-1beta mRNA, complete cds.      48   0.40   1
(AC121125) Mus musculus chromosome 5, clone RP23-10F17, comp...    48   0.40   1
(AM485728) Vitis vinifera contig VV78X153061.2, whole genome...    48   0.40   1
(AM428738) Vitis vinifera contig VV78X030559.12, whole genom...    48   0.40   1
(AC233578) Biomphalaria glabrata BAC clone BG_BBa-117G16 fro...    48   0.40   1
(AC233255) Biomphalaria glabrata BAC clone BG_BBa-137G9 from...    48   0.40   1
(FP236597) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.40   1
(FP236251) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.40   1
(CU915765) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.40   1
(AC068065) Mus musculus strain C57BL6/J clone RP23-309J5, WO...    48   0.40   1
(AC233163) Biomphalaria glabrata chromosome UNK clone BG_BBa...    48   0.40   1
(AC205644) Ixodes scapularis chromosome unknown clone ISG1-3...    48   0.40   1
(AZ666763) 1M0549E10F Mouse 10kb plasmid UUGC1M library Mus ...    48   0.40   1
(CZ548063) BG_BBa0020A02.f BG_BBa Biomphalaria glabrata geno...    48   0.40   1
(CZ547941) BG_BBa0003A02.r BG_BBa Biomphalaria glabrata geno...    48   0.40   1
(CZ547934) BG_BBa0002A03.f BG_BBa Biomphalaria glabrata geno...    48   0.40   1
(DW474363) camceP051H06 camce Biomphalaria glabrata cDNA clo...    48   0.40   1
(DV081601) 248-2_C21.abi Nematostella vectensis non-normaliz...    48   0.40   1
(CV102757) AGENCOURT_31581459 NIH_ZGC_15 Danio rerio cDNA cl...    48   0.40   1
(AM099450) Lutzomyia longipalpis EST clone NSFM-65b03, seque...    48   0.40   1
(CK236602) AGENCOURT_16980244 NCI_CGAP_ZKid1 Danio rerio cDN...    48   0.40   1
(CD760665) UNMBS90SSHV10 B. glabrata BS90 - M line (exposed)...    48   0.40   1
(GE906237) 9330023_N15.ab1_c Past_norm2007 Porites astreoide...    48   0.40   1
(FG716909) G1144P317FA24.T0 Anolis carolinensis pooled norma...    48   0.40   1
(FF617690) G825P5210RA1.T0 Acorn worm normalized gastrula pE...    48   0.40   1
(FC859776) CAMPEP626h08 CAMPE Biomphalaria glabrata cDNA clo...    48   0.40   1
(FC856997) CAMHEP426b06 CAMHE Biomphalaria glabrata cDNA clo...    48   0.40   1
(FC297059) CAGN9046.fwd CAGN Nematostella vectensis Nemve mi...    48   0.40   1
(EW998690) BGBV-aae20e01.g1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(EV815504) BGBV-aae56a07.b1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(ES749152) BGBV-aad43c12.g1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(ES748534) BGBV-aad36g02.g1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(ES491924) HP00632 Biomphalaria glabrata resistant snail (BS...    48   0.40   1
(ES491898) HP00606 Biomphalaria glabrata resistant snail (BS...    48   0.40   1
(ES491693) HP00401 Biomphalaria glabrata resistant snail (BS...    48   0.40   1
(ES489501) BGBV-aac62a10.b1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(ES488026) BGBV-aac68g07.g1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(ES488005) BGBV-aac68h06.g1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(ES486928) BGBV-aac91g09.b1 Snail_EST_pSMART Biomphalaria gl...    48   0.40   1
(AP005130) Homo sapiens genomic DNA, chromosome 18 clone:RP1...    42   0.53   3
(AC188240) Saimiri boliviensis boliviensis clone CH254-136D2...    36   0.59   5
(AP010104) Lotus japonicus genomic DNA, clone: LjT44F11, TM0...    36   0.87   2
(J01478) Yeast (S.cerevisiae) mitochondrial oxi2 gene encodi...    40   0.91   2
(AP009294) Solanum lycopersicum genomic DNA, chromosome 8, c...    38   1.2    3
(AC189837) Colobus guereza clone CH272-18K21, WORKING DRAFT ...    34   1.3    5
(AC206116) Saccoglossus kowalevskii clone CUGI_SK_BA 001B7, ...    46   1.4    2
(AC168793) Strongylocentrotus purpuratus clone R3-13J12, WOR...    40   1.5    3
(EU284132) Latimeria menadoensis U-box domain containing 5 (...    46   1.6    1
(CU856254) Zebrafish DNA sequence from clone DKEY-110C9 in l...    46   1.6    1
(CR387936) Zebrafish DNA sequence from clone CH211-85P6 in l...    46   1.6    1
(BX511183) Zebrafish DNA sequence from clone CH211-51F18 in ...    46   1.6    1
(BX470230) Zebrafish DNA sequence from clone CH211-284B12 in...    46   1.6    1
(BX322662) Zebrafish DNA sequence from clone CH211-222C18 in...    46   1.6    1
(BX276103) Zebrafish DNA sequence from clone DKEY-7B17 in li...    46   1.6    1
(BX005006) Zebrafish DNA sequence from clone DKEY-47K14.           46   1.6    1
(BX004971) Zebrafish DNA sequence from clone DKEY-121A9 in l...    46   1.6    1
(BX004801) Zebrafish DNA sequence from clone CH211-203K12 in...    46   1.6    1
(AL954190) Zebrafish DNA sequence from clone DKEY-30O6 in li...    46   1.6    1
(AJ632329) Cotesia congregata virus complete genome, segment...    46   1.6    1
(AC166096) Mus musculus BAC clone RP24-467F14 from chromosom...    46   1.6    1
(AM482610) Vitis vinifera contig VV78X053631.9, whole genome...    46   1.6    1
(AM461053) Vitis vinifera contig VV78X080139.10, whole genom...    46   1.6    1
(AM452959) Vitis vinifera, whole genome shotgun sequence, co...    46   1.6    1
(DD392017) Method and nucleic acids for the improved treatme...    46   1.6    1
(DD391743) Method and nucleic acids for the improved treatme...    46   1.6    1
(CQ807273) Sequence 723 from Patent WO2004035803.                  46   1.6    1
(CQ806999) Sequence 449 from Patent WO2004035803.                  46   1.6    1
(EU124575) Lutzomyia longipalpis putative chymotrypsin (Chym...    46   1.6    1
(AY028462) Biomphalaria glabrata fibrinogen-related protein ...    46   1.6    1
(AC206114) Saccoglossus kowalevskii  BAC CUGI_SK_BA 001B5 (C...    46   1.6    1
(AC205638) Ixodes scapularis BAC ISG1-15P02, complete sequence.    46   1.6    1
(AC151587) Nematostella vectensis clone JGIAFIN-297A13, comp...    46   1.6    1
(AC133813) Rattus norvegicus clone CH230-41K4, *** SEQUENCIN...    46   1.6    1
(AC106373) Rattus norvegicus clone CH230-115O1, *** SEQUENCI...    46   1.6    1
(AC096025) Rattus norvegicus clone CH230-36P13, *** SEQUENCI...    46   1.6    1
(FP102895) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   1.6    1
(CT009743) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    46   1.6    1
(CR936557) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    46   1.6    1
(AC225325) Heliconius erato clone BBAM-22N23, WORKING DRAFT ...    46   1.6    1
(AC217916) Latimeria menadoensis clone VMRC4-133N21, *** SEQ...    46   1.6    1
(AC216956) Latimeria menadoensis clone VMRC4-37P20, *** SEQU...    46   1.6    1
(AC215495) Latimeria menadoensis clone VMRC4-121C4, *** SEQU...    46   1.6    1
(AC208806) Heliconius erato clone BBAM-48A16, WORKING DRAFT ...    46   1.6    1
(AC178624) Strongylocentrotus purpuratus clone R3-114A11, WO...    46   1.6    1
(FI512606) 078-TKN-MI_005_M01_T7 078-TKN-MI Meleagris gallop...    46   1.6    1
(EJ941215) 1093018866992 Global-Ocean-Sampling_GS-30-02-01-1...    46   1.6    1
(EI696688) SB_BBd13-F11.R SB_BBd Sorghum bicolor genomic 3',...    46   1.6    1
(ED473270) AUAC-aac84e05.g1 Ascaris suum whole genome shotgu...    46   1.6    1
(ED418623) AUAC-aay82c09.g1 Ascaris suum whole genome shotgu...    46   1.6    1
(ED354603) AUAC-aak39a05.g1 Ascaris suum whole genome shotgu...    46   1.6    1
(ED298731) AUAC-aau53a09.b1 Ascaris suum whole genome shotgu...    46   1.6    1
(ED072501) AUAC-aav26b11.b1 Ascaris suum whole genome shotgu...    46   1.6    1
(DE206872) Branchiostoma floridae DNA, clone: CH302-094_O10_...    46   1.6    1
(DE027718) Branchiostoma floridae DNA, clone: CH302-043K04.R...    46   1.6    1
(DE024076) Branchiostoma floridae DNA, clone: CH302-038H07.F...    46   1.6    1
(CZ679894) OM__Ba0238F06.r OM__Ba Oryza minuta genomic clone...    46   1.6    1
(CZ547955) BG_BBa0005A03.r BG_BBa Biomphalaria glabrata geno...    46   1.6    1
(CW875768) sh2f4-76.b.ab1 Whole-genome shotgun library of th...    46   1.6    1
(CW256629) 104_721_11226894_116_35141_019 Sorghum methylatio...    46   1.6    1
(CW193888) 104_616_11179806_116_36784_017 Sorghum methylatio...    46   1.6    1
(CW064176) 104_310_10522418_114_30141 Sorghum methylation fi...    46   1.6    1
(CT504986) A BAC library has been constructed from cultivar ...    46   1.6    1
(CT497966) A BAC library has been constructed from cultivar ...    46   1.6    1
(AG395651) Mus musculus molossinus DNA, clone:MSMg01-215G02....    46   1.6    1
(DB836532) Nilaparvata lugens mRNA, EST clone:NLTA2513, 5' e...    46   1.6    1
(DB835526) Nilaparvata lugens mRNA, EST clone:NLTA0589, 5' e...    46   1.6    1
(AM099454) Lutzomyia longipalpis EST clone NSFM-112c06, sequ...    46   1.6    1
(AM099453) Lutzomyia longipalpis EST clone NSFM-65b03, seque...    46   1.6    1
(AM093247) Lutzomyia longipalpis EST clone NSFM-01d03, seque...    46   1.6    1
(AM093246) Lutzomyia longipalpis EST clone NSFM-01d03, seque...    46   1.6    1
(AM088930) Lutzomyia longipalpis EST clone SFM-05f07, sequen...    46   1.6    1
(AM088929) Lutzomyia longipalpis EST clone NSFM-04d11, seque...    46   1.6    1
(AM088928) Lutzomyia longipalpis EST clone NSFM-04d11, seque...    46   1.6    1
(AM088927) Lutzomyia longipalpis EST clone NSFM-160e05, sequ...    46   1.6    1
(AM088926) Lutzomyia longipalpis EST clone NSFM-30b07, seque...    46   1.6    1
(AM088925) Lutzomyia longipalpis EST clone NSFM-142e01, sequ...    46   1.6    1
(AM088923) Lutzomyia longipalpis EST clone SFM-05f07, sequen...    46   1.6    1
(CK882733) SGP147392 Atlantic salmon Heart cDNA library Salm...    46   1.6    1
(CB035649) jaa03c07.y1 Anolis sagrei limb bud 1 Anolis sagre...    46   1.6    1
(GE801267) EST_scau_evk_891626 scauevk mixed_tissue Sebastes...    46   1.6    1
(GE801266) EST_scau_evk_892010 scauevk mixed_tissue Sebastes...    46   1.6    1
(FG735927) G1145P337RE22.T0 Anolis carolinensis pooled norma...    46   1.6    1
(FG725952) G1145P37RF11.T0 Anolis carolinensis pooled normal...    46   1.6    1
(FG725760) G1145P37FF11.T0 Anolis carolinensis pooled normal...    46   1.6    1
(FG716957) G1144P317RA24.T0 Anolis carolinensis pooled norma...    46   1.6    1
(FG711755) G1144P322RB3.T0 Anolis carolinensis pooled normal...    46   1.6    1
(FG690292) G1144P332RN15.T0 Anolis carolinensis pooled norma...    46   1.6    1
(FG679540) G1143P320RO20.T0 Anolis carolinensis pooled norma...    46   1.6    1
(FG679492) G1143P320FO20.T0 Anolis carolinensis pooled norma...    46   1.6    1
(FF646931) G826P5148RD2.T0 Acorn worm normalized juvenile pE...    46   1.6    1
(FF646930) G826P5148FD2.T0 Acorn worm normalized juvenile pE...    46   1.6    1
(FF621602) G825P5243FF10.T0 Acorn worm normalized gastrula p...    46   1.6    1
(FF532739) G710P5414RE7.T0 Acorn worm normalized juvenile pE...    46   1.6    1
(FF508103) G709P5225FA1.T0 Acorn worm normalized neurula pEx...    46   1.6    1
(FF433080) G142P60159RG1.T0 Acorn worm juvenile pCMVSport6 l...    46   1.6    1
(FF305798) 279364390 Pea aphid whole body normalized full le...    46   1.6    1
(FC837848) CBHI7426.rev CBHI Metridium senile tentacle Metri...    46   1.6    1
(FC309191) CAIC17883.fwd CAIC Nematostella vectensis Nemve w...    46   1.6    1
(FC309190) CAIC17883.rev CAIC Nematostella vectensis Nemve w...    46   1.6    1
(FC247536) CAGH4838.rev CAGH Nematostella vectensis Nemve La...    46   1.6    1
(FC227233) CAGF9612.rev CAGF Nematostella vectensis Nemve Ea...    46   1.6    1
(EY446269) CBAY8421.fwd CBAY Tubifex tubifex Embryos and juv...    46   1.6    1
(EY446268) CBAY8421.rev CBAY Tubifex tubifex Embryos and juv...    46   1.6    1
(EX613444) 255383439 Pea aphid whole body normalized full le...    46   1.6    1
(EW997577) 3017HOUN42G1 BgSSH (Un-Ex) unexposed NHM 3017 Hae...    46   1.6    1
(EW990473) LJGFIM27_C10 Adult female Lutzomyia longipalpis m...    46   1.6    1
(EW989412) LJGFIL4_A05 Adult female Lutzomyia longipalpis mi...    46   1.6    1
(EW989296) LJGFIL2_E09 Adult female Lutzomyia longipalpis mi...    46   1.6    1
(EW989086) LJGFS_P04_G10 Adult female Lutzomyia longipalpis ...    46   1.6    1
(EW958152) G894P5223FF14.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW953893) G894P5211FK16.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW950698) G894P5204FB1.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW946004) G894P5198FE14.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW937377) G894P5187FA9.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW920769) G894P5162FG7.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW909060) G894P5144FK24.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW907041) G894P5143RM3.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW907040) G894P5143FM3.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW903812) G894P5139RA11.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW903811) G894P5139FA11.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW893919) G894P5126FL19.T0 Ixodes scapularis Pooled Non-inf...    46   1.6    1
(EW886386) G894P556FM7.T0 Ixodes scapularis Pooled Non-infec...    46   1.6    1
(EW870288) G894P527FK18.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW865319) G894P515FI14.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW861994) G894P511FK24.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW854734) G894P5117FC8.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW844795) G894P5104FO4.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW840171) G894P597FC19.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW839775) G894P593RJ13.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW839774) G894P593FJ13.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW839248) G894P595FN11.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW828689) G894P578FI1.T0 Ixodes scapularis Pooled Non-infec...    46   1.6    1
(EW823987) G894P571FK24.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW820238) G894P569FD12.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(EW806590) G893P540FA21.T0 Ixodes scapularis Pooled Non-infe...    46   1.6    1
(ES747425) BGBV-aad55a12.g1 Snail_EST_pSMART Biomphalaria gl...    46   1.6    1
(ES529052) BIG_AF_36873 Brine Shrimp embryos, 15 hours after...    46   1.6    1
(AC188271) Callicebus moloch clone LB5-124D7, WORKING DRAFT ...    38   1.7    5
(AC201240) Strongylocentrotus purpuratus clone R3-15K3, WORK...    40   1.8    2
(AC181861) Strongylocentrotus purpuratus clone R3-1019O09, W...    40   1.9    2
(CW860237) she2h73-9.g_039.ab1 Whole-genome shotgun library ...    40   2.0    2
(AL732628) Zebrafish DNA sequence from clone CH211-144F18 in...    40   2.2    2
(BX005483) Zebrafish DNA sequence from clone CH211-286G12 in...    42   2.3    2
(AC224289) Bos taurus clone CH240-490G14, WORKING DRAFT SEQU...    40   2.4    2
(AC219376) Bos taurus clone CH240-338L12, WORKING DRAFT SEQU...    40   2.4    2
(CR925712) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    32   3.0    2
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2...    32   3.0    2
(EK400082) 1095469537512 Global-Ocean-Sampling_GS-31-01-01-1...    42   3.1    2
(BX649356) Zebrafish DNA sequence from clone CH211-209H5 in ...    34   3.1    2
(AC220510) Bos taurus clone CH240-355P4, WORKING DRAFT SEQUE...    32   3.1    2
(BX119926) Zebrafish DNA sequence from clone CH211-42C8 in l...    34   3.1    2
(CT027739) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   3.1    2
(EB228120) PEG003-C-207317-501 Normalized Pedal-Pleural Gang...    36   3.1    2
(CR627494) Zebrafish DNA sequence from clone CH211-48C9 in l...    32   3.2    2
(EY347665) CAWZ15738.fwd CAWZ Helobdella robusta Primary Lat...    36   3.2    2
(AC112096) Rattus norvegicus clone CH230-38F7, WORKING DRAFT...    44   3.4    2
(AC107361) Rattus norvegicus clone CH230-86H13, *** SEQUENCI...    44   3.6    2
(AC176293) Strongylocentrotus purpuratus clone R3-3057J9, WO...    40   3.6    3
(CU013547) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    42   3.8    3
(DR398663) TKN092F12_634182 Taraxacum kok-saghyz root cDNA l...    34   4.2    2
(EI502742) PV_GBa0123E14.r PV_GBa Phaseolus vulgaris genomic...    32   4.2    2
(AU053286) Dictyostelium discoideum slug cDNA, clone SLI318.       34   4.2    2
(AF267914) Saccharomyces bayanus tRNA-Thr gene, partial sequ...    38   4.8    2
(CT033822) Zebrafish DNA sequence from clone CH211-198D15 in...    42   4.9    2
(EU141966) Carica papaya floral organ identity protein gene,...    32   5.5    3
(AM470686) Vitis vinifera contig VV78X085117.16, whole genom...    40   5.8    2
(AC146846) Ornithorhynchus anatinus clone OA_Bb-393H9, WORKI...    42   6.1    2
(AC135415) Medicago truncatula clone mth2-10b9, complete seq...    40   6.2    2
(CU862014) Zebrafish DNA sequence from clone CH211-242K17 in...    44   6.3    1
(CT027690) Zebrafish DNA sequence from clone DKEY-184A13 in ...    44   6.3    1
(CR790368) Zebrafish DNA sequence from clone DKEY-163F14 in ...    44   6.3    1
(CR786562) Zebrafish DNA sequence from clone CH211-244H7 in ...    44   6.3    1
(CR450736) Zebrafish DNA sequence from clone DKEYP-27G9 in l...    44   6.3    1
(CR392033) Zebrafish DNA sequence from clone DKEY-122A22 in ...    44   6.3    1
(CR388031) Zebrafish DNA sequence from clone CH211-192P3 in ...    44   6.3    1
(CR318645) Zebrafish DNA sequence from clone CH211-161F7 in ...    44   6.3    1
(BX927076) Zebrafish DNA sequence from clone CH211-241L24 in...    44   6.3    1
(BX908400) Zebrafish DNA sequence from clone CH211-166I5 in ...    44   6.3    1
(BX510306) Zebrafish DNA sequence from clone CH211-195F19 in...    44   6.3    1
(BX470234) Zebrafish DNA sequence from clone DKEY-94N12 in l...    44   6.3    1
(BX321905) Zebrafish DNA sequence from clone DKEYP-13F6 in l...    44   6.3    1
(BX000489) Zebrafish DNA sequence from clone CH211-215E19 in...    44   6.3    1
(AL935035) Zebrafish DNA sequence from clone CH211-180B22 in...    44   6.3    1
(AC182457) Gallus gallus BAC clone CH261-191O3 from chromoso...    44   6.3    1
(BV211320) BARC1137 Wheat var Chinese Spring Genomic DNA Tri...    44   6.3    1
(AC164643) Mus musculus BAC clone RP23-254F23 from chromosom...    44   6.3    1
(AC150894) Mus musculus BAC clone RP24-409D4 from chromosome...    44   6.3    1
(AC175833) Pan troglodytes BAC clone CH251-679G1 from chromo...    44   6.3    1
(AC175822) Pan troglodytes BAC clone CH251-442M6 from chromo...    44   6.3    1
(AM487281) Vitis vinifera contig VV78X019214.3, whole genome...    44   6.3    1
(AM427437) Vitis vinifera contig VV78X268735.8, whole genome...    44   6.3    1
(AC182579) Medicago truncatula chromosome 7 BAC clone mth2-8...    44   6.3    1
(AC137602) Medicago truncatula clone mth2-14k4, complete seq...    44   6.3    1
(DL142443) High Throughput Proteomics.                             44   6.3    1
(AR584244) Sequence 1 from patent US 6797466.                      44   6.3    1
(AR271569) Sequence 1 from patent US 6503729.                      44   6.3    1
(M63846) Hyalophora cecropia cecropin D gene, complete cds.        44   6.3    1
(EF418587) Biomphalaria glabrata clone BRIBAC72bg_line5, com...    44   6.3    1
(AJ000992) Dictyostelium discoideum gdt1 gene.                     44   6.3    1
(AF007261) Reclinomonas americana mitochondrion, complete ge...    44   6.3    1
(AC233256) Biomphalaria glabrata BAC clone BG_BBa-137H24 fro...    44   6.3    1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    44   6.3    1
(AC002451) Homo sapiens BAC clone GS1-306C12 from 7, complet...    44   6.3    1
(AC142148) Rattus norvegicus clone CH230-241O14, WORKING DRA...    44   6.3    1
(AC139605) Rattus norvegicus clone CH230-190M9, WORKING DRAF...    44   6.3    1
(AC129633) Rattus norvegicus clone CH230-265I14, WORKING DRA...    44   6.3    1
(FP102263) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   6.3    1
(CU929284) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   6.3    1
(CU633479) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   6.3    1
(AC093706) Pan troglodytes clone RP43-133I11, WORKING DRAFT ...    44   6.3    1
(CR749773) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   6.3    1
(AL844506) Plasmodium falciparum chromosome  7.                    44   6.3    1
(AC234366) Solanum lycopersicum chromosome 7 clone C07SLe008...    44   6.3    1
(AC233165) Biomphalaria glabrata chromosome UNK clone BG_BBa...    44   6.3    1
(AC181029) Strongylocentrotus purpuratus clone R3-3050O24, W...    44   6.3    1
(AC180879) Strongylocentrotus purpuratus clone R3-3026C22, W...    44   6.3    1
(AC180814) Strongylocentrotus purpuratus clone R3-3071M24, W...    44   6.3    1
(AC179836) Strongylocentrotus purpuratus clone R3-1012D6, WO...    44   6.3    1
(AC179706) Strongylocentrotus purpuratus clone R3-1021J1, WO...    44   6.3    1
(AC178772) Strongylocentrotus purpuratus clone R3-19J13, WOR...    44   6.3    1
(AC178572) Strongylocentrotus purpuratus clone R3-3027C03, W...    44   6.3    1
(AC178391) Strongylocentrotus purpuratus clone R3-3107P8, WO...    44   6.3    1
(AC178183) Strongylocentrotus purpuratus clone R3-3082D3, WO...    44   6.3    1
(AC177955) Strongylocentrotus purpuratus clone R3-3049C24, W...    44   6.3    1
(AC177422) Strongylocentrotus purpuratus clone R3-54K14, WOR...    44   6.3    1
(AC177193) Strongylocentrotus purpuratus clone R3-1034P02, W...    44   6.3    1
(AC176992) Strongylocentrotus purpuratus clone R3-36P6, WORK...    44   6.3    1
(AC174738) Strongylocentrotus purpuratus clone R3-1030P16, W...    44   6.3    1
(AC023460) Homo sapiens chromosome 7 clone RP11-799J23 map 7...    44   6.3    1
(AQ946873) Sheared DNA-36A3.TR Sheared DNA Trypanosoma bruce...    44   6.3    1
(FI518531) 078-TKN-MI_024_E08_T7 078-TKN-MI Meleagris gallop...    44   6.3    1
(FH274905) CHO_OF4157xh19r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   6.3    1
(FH274829) CHO_OF4157xh19f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   6.3    1
(ET795725) CHO_OF661xn18r1.ab1 CHO_OF Nicotiana tabacum geno...    44   6.3    1
(ET795678) CHO_OF661xn18f1.ab1 CHO_OF Nicotiana tabacum geno...    44   6.3    1
(ER308016) 1092343769685 Global-Ocean-Sampling_GS-34-01-01-1...    44   6.3    1
(EK205977) 1095460074248 Global-Ocean-Sampling_GS-31-01-01-1...    44   6.3    1
(EK123899) 1092966609739 Global-Ocean-Sampling_GS-31-01-01-1...    44   6.3    1
(EK109682) 1092963092530 Global-Ocean-Sampling_GS-31-01-01-1...    44   6.3    1
(EJ635901) 1092990802670 Global-Ocean-Sampling_GS-29-01-01-1...    44   6.3    1
(EJ611335) 1092962046826 Global-Ocean-Sampling_GS-29-01-01-1...    44   6.3    1
(EI689860) SB_BBd12-M07.R SB_BBd Sorghum bicolor genomic 3',...    44   6.3    1
(ED434827) AUAC-aaj50a07.b1 Ascaris suum whole genome shotgu...    44   6.3    1
(DX514723) 702_4_14173653_5489_43654_003 Arachis hypogaea me...    44   6.3    1
(CU156498) Equus caballus GSS, BAC clone CH241-299M12, T7 en...    44   6.3    1
(CT381244) Sus scrofa genomic clone CH242-336H23, genomic su...    44   6.3    1
(CR160686) Forward strand read from insert in 3'HPRT inserti...    44   6.3    1
(CG751555) P046-1-A10.ya Ppa EcoRI BAC Library Pristionchus ...    44   6.3    1
(CE440087) tigr-gss-dog-17000335929502 Dog Library Canis lup...    44   6.3    1
(BH979709) odf91a05.b1 B.oleracea002 Brassica oleracea genom...    44   6.3    1
(EG600249) EMBRYOF101126K6 POSSUM_01-POSSUM-C-EMBRYO-2KB Tri...    44   6.3    1
(AM784758) Nicotiana tabacum EST, clone nt005065090.               44   6.3    1
(CN741109) SM_TPA1446 Suidasia medanensis cDNA library Suida...    44   6.3    1
(CB679258) OSJNEf02I13.r OSJNEf Oryza sativa Japonica Group ...    44   6.3    1
(BJ357788) Dictyostelium discoideum cDNA clone:dda64o17, 3' ...    44   6.3    1
(GE912666) Past_21_20453_D03.ab1_c Past_norm2007 Porites ast...    44   6.3    1
(GE911531) Past_17_20453_O02.ab1_c Past_norm2007 Porites ast...    44   6.3    1
(GE908281) 9551023_H07.ab1_c Past_norm2007 Porites astreoide...    44   6.3    1
(GE906322) 9331023_E19.ab1_c Past_norm2007 Porites astreoide...    44   6.3    1
(FK881715) EST_crog_evp_904078 crog_evp Caligus rogercressey...    44   6.3    1
(FC857792) CAMMEP340g08 CAMME Biomphalaria glabrata cDNA clo...    44   6.3    1
(EY390998) CAXA903.fwd CAXA Helobdella robusta Subtracted La...    44   6.3    1
(EY302635) CAWX16264.fwd CAWX Helobdella robusta Primary Ear...    44   6.3    1
(EW916245) G894P5154FO8.T0 Ixodes scapularis Pooled Non-infe...    44   6.3    1
(EW832726) G894P586FE9.T0 Ixodes scapularis Pooled Non-infec...    44   6.3    1
(L77117) Methanocaldococcus jannaschii DSM 2661, complete ge...    44   6.3    1
(CU407328) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   6.3    4
(L36897) Saccharomyces cerevisiae mitochondrion oxi3 gene, a...    40   6.7    3
(AC092945) Homo sapiens 12 BAC RP11-290O5 (Roswell Park Canc...    42   6.9    2
(AQ603657) HS_2131_A1_F11_T7C CIT Approved Human Genomic Spe...    34   7.3    2
(BZ302635) KD1946.q1 Kluyveromyces delphensis Random Genomic...    34   7.3    2
(BX936382) Zebrafish DNA sequence from clone CH211-223A21 in...    40   7.5    2
(AC206455) Pongo abelii BAC clone CH276-167G4 from chromosom...    42   7.6    3
(AC183064) Bos taurus clone CH240-24C6, WORKING DRAFT SEQUEN...    40   7.7    3
(BX005174) Zebrafish DNA sequence from clone CH211-134M17 in...    40   8.1    2
(AC178518) Strongylocentrotus purpuratus clone R3-3032B4, WO...    38   8.9    2
(AM469019) Vitis vinifera contig VV78X010459.6, whole genome...    38   9.0    2
(AM045689) Schistosoma mansoni lung schistosomulum EST, clon...    36   9.1    2
(AC200956) Strongylocentrotus purpuratus clone R3-1108F20, W...    40   9.4    2
(FF337632) 280467983 Pea aphid whole body normalized full le...    32   9.7    3
(AM479876) Vitis vinifera contig VV78X086490.5, whole genome...    40   9.8    2

>(C83844) Dictyostelium discoideum slug cDNA, clone SSA364.
          Length = 438

 Score =  145 bits (73), Expect(3) = 4e-64
 Identities = 79/82 (96%)
 Strand = Plus / Plus


Query: 285 gatcagattctggaattagngtcnccaaaagatgaagatttaaatgaagctgattatatt 344
           ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 99  gatcagattctggaattagggtccccaaaagatgaagatttaaatgaagctgattatatt 158


Query: 345 gaaaaggntggatattcaataa 366
           ||||||| ||||||||||||||
Sbjct: 159 gaaaagggtggatattcaataa 180

 Score =  119 bits (60), Expect(3) = 4e-64
 Identities = 60/60 (100%)
 Strand = Plus / Plus


Query: 540 taaatgcaaacattaatacagtttatgcataatatttaataaagattattattattatta 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 taaatgcaaacattaatacagtttatgcataatatttaataaagattattattattatta 413

 Score = 40.1 bits (20), Expect(3) = 4e-64
 Identities = 26/29 (89%)
 Strand = Plus / Plus


Query: 187 tattagtttcancaattntagnggatgat 215
           ||||||||||| ||||| ||| |||||||
Sbjct: 1   tattagtttcaccaattttaggggatgat 29

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 363,637,012
Number of extensions: 32233806
Number of successful extensions: 5749026
Number of sequences better than 10.0: 351
Length of query: 623
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 599
Effective length of database: 99,340,224,878
Effective search space: 59504794701922
Effective search space used: 59504794701922
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.30
Homology vs Protein 
Query= Contig-U04374-1 (Contig-U04374-1Q) /CSM_Contig/Contig-U04374-1Q.Seq.d
         (623 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 368,699,256
Number of extensions: 3411963
Number of successful extensions: 5008
Number of sequences better than 10.0: 0
Number of HSP's gapped: 5008
Number of HSP's successfully gapped: 0
Length of query: 207
Length of database: 1,061,185,681
Length adjustment: 123
Effective length of query: 84
Effective length of database: 659,166,577
Effective search space: 55369992468
Effective search space used: 55369992468
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.36  gvh: 0.33  alm: 0.54  top: 0.53  tms: 0.00  mit: 0.17  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 32.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U04374-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0