Contig-U04327-1
Contig ID Contig-U04327-1
Contig update 2001. 8.29
Contig sequence
>Contig-U04327-1 (Contig-U04327-1Q) /CSM_Contig/Contig-U04327-1Q.Seq.d
ATCAAATTCAAATCATTCAACAAATTCAAACTTTTCACAATGTTCATCAA
GTCATAGTTTATTAGATACCAATATTGGTGGTATCCAATGTAAATACTCA
AAATTTGGTTTCATTTACAAATGAAACTTCAAACTCTGGTTCAACTATTA
TAAAGCCTGTTGCACTTAAATCTAGTAGCAGAAGCGTATTTAATAGTAGT
AATAATCAACAATATCTTTTCTCTTCTTCGACTTTATCTTCATCTTCTTC
GACTAAAACTAATAATAATTCAACAACAACCACCACTACCACCACCGCCA
AAACATCATCAACTTCAACAAATGATTACTCATCTATTAAAGGTAAAAGT
TTAATAGATGATGATGCATCCTGCTCGATTTCTTCATTTAATGCAATTGA
ACAACAAGTTCTAATTCCAACGGTCCTATCATCATCCTCTTCATCTCATG
TTATGAAAAGAAGTAATGGTAGTTCAAATGGTGGTAACTCCACCATACAA
TCACCATCTTGTAATCAAATATCGATCAATAAGAATAACTTGGTAGATAT
CGATGATGAGGATGAGGATGATGAGGACGATATCAATGGCCATTGGGAAA
AATTAACAATACCATCTAATATGTGTAGAGATCAAATCTCAAATTAAGAA
ATAAATTTTGATGGAATCGACAAAAGTAATTTGCTAATATACTTTATTTT
AAAAAATATAAAAAGAAAAAAAAAAAAATAAAAATTTTAAAAAAAAAATA
TATTTATTTTAAAAAA

Gap no gap
Contig length 766
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5134155
End point 5134840
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 2
Link to clone list U04327
List of clone(s)

est1=SSA190E,1,750
est2=SSC256E,99,767
Translated Amino Acid sequence
qiqiiqqiqtfhnvhqvivy*IPILVVSNVNTQNLVSFTNETSNSGSTIIKPVALKSSSR
SVFNSSNNQQYLFSSSTLSSSSSTKTNNNSTTTTTTTTAKTSSTSTNDYSSIKGKSLIDD
DASCSISSFNAIEQQVLIPTVLSSSSSSHVMKRSNGSSNGGNSTIQSPSCNQISINKNNL
VDIDDEDEDDEDDINGHWEKLTIPSNMCRDQISN*einfdgidksnlliyfilknikrkk
kk*kf*kknifilk


Translated Amino Acid sequence (All Frames)
Frame A:
ikfksfnkfklftmfiks*firyqywwypm*ilkiwfhlqmklqtlvqll*sllhlnlva
eaylivviinnifsllrlylhllrlkliiiqqqpplppppkhhqlqqmithllkvkv**m
mmhparflhlmqlnnkf*fqrsyhhplhlml*kevmvvqmvvtppynhhlvikyrsirit
w*ismmrmrmmrtismaigkn*qyhlicveiksqikk*ilmestkvic*ytlf*ki*kek
kknknfkkkiylf*k


Frame B:
snsnhstnsnfsqcssshslldtniggiqckyskfgfiyk*nfklwfnyykacct*i**q
kri*****stisflffdfififfd*n***fnnnhhyhhrqniinfnk*lliy*r*kfnr*
*cilldffi*cn*ttssnsngpiiilfiscyekk*w*fkww*lhhtitil*snidq*e*l
gryr**g*g**gryqwplgkinnti*yv*rsnlklrnkf*wnrqk*fanilyfkkykkkk
kkikilkkkyiyfkk


Frame C:
qiqiiqqiqtfhnvhqvivy*IPILVVSNVNTQNLVSFTNETSNSGSTIIKPVALKSSSR
SVFNSSNNQQYLFSSSTLSSSSSTKTNNNSTTTTTTTTAKTSSTSTNDYSSIKGKSLIDD
DASCSISSFNAIEQQVLIPTVLSSSSSSHVMKRSNGSSNGGNSTIQSPSCNQISINKNNL
VDIDDEDEDDEDDINGHWEKLTIPSNMCRDQISN*einfdgidksnlliyfilknikrkk
kk*kf*kknifilk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04327-1 (Contig-U04327-1Q)
/CSM_Contig/Contig-U04327-1Q.Seq.d
(766 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04327-1 (Contig-U04327-1Q) /CSM_Contig/Conti... 1388 0.0
Contig-U11181-1 (Contig-U11181-1Q) /CSM_Contig/Conti... 52 9e-07
Contig-U11500-1 (Contig-U11500-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U10647-1 (Contig-U10647-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U10643-1 (Contig-U10643-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U06491-1 (Contig-U06491-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U04297-1 (Contig-U04297-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U09546-1 (Contig-U09546-1Q) /CSM_Contig/Conti... 42 9e-04
Contig-U13408-1 (Contig-U13408-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U11947-1 (Contig-U11947-1Q) /CSM_Contig/Conti... 40 0.003

>Contig-U04327-1 (Contig-U04327-1Q) /CSM_Contig/Contig-U04327-1Q.Seq.d
Length = 766

Score = 1388 bits (700), Expect = 0.0
Identities = 700/700 (100%)
Strand = Plus / Plus


Query: 1 atcaaattcaaatcattcaacaaattcaaacttttcacaatgttcatcaagtcatagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcaaattcaaatcattcaacaaattcaaacttttcacaatgttcatcaagtcatagttt 60


Query: 61 attagataccaatattggtggtatccaatgtaaatactcaaaatttggtttcatttacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attagataccaatattggtggtatccaatgtaaatactcaaaatttggtttcatttacaa 120


Query: 121 atgaaacttcaaactctggttcaactattataaagcctgttgcacttaaatctagtagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaaacttcaaactctggttcaactattataaagcctgttgcacttaaatctagtagca 180


Query: 181 gaagcgtatttaatagtagtaataatcaacaatatcttttctcttcttcgactttatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagcgtatttaatagtagtaataatcaacaatatcttttctcttcttcgactttatctt 240


Query: 241 catcttcttcgactaaaactaataataattcaacaacaaccaccactaccaccaccgcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catcttcttcgactaaaactaataataattcaacaacaaccaccactaccaccaccgcca 300


Query: 301 aaacatcatcaacttcaacaaatgattactcatctattaaaggtaaaagtttaatagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaacatcatcaacttcaacaaatgattactcatctattaaaggtaaaagtttaatagatg 360


Query: 361 atgatgcatcctgctcgatttcttcatttaatgcaattgaacaacaagttctaattccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atgatgcatcctgctcgatttcttcatttaatgcaattgaacaacaagttctaattccaa 420


Query: 421 cggtcctatcatcatcctcttcatctcatgttatgaaaagaagtaatggtagttcaaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggtcctatcatcatcctcttcatctcatgttatgaaaagaagtaatggtagttcaaatg 480


Query: 481 gtggtaactccaccatacaatcaccatcttgtaatcaaatatcgatcaataagaataact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtggtaactccaccatacaatcaccatcttgtaatcaaatatcgatcaataagaataact 540


Query: 541 tggtagatatcgatgatgaggatgaggatgatgaggacgatatcaatggccattgggaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggtagatatcgatgatgaggatgaggatgatgaggacgatatcaatggccattgggaaa 600


Query: 601 aattaacaataccatctaatatgtgtagagatcaaatctcaaattaagaaataaattttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aattaacaataccatctaatatgtgtagagatcaaatctcaaattaagaaataaattttg 660


Query: 661 atggaatcgacaaaagtaatttgctaatatactttatttt 700
||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atggaatcgacaaaagtaatttgctaatatactttatttt 700


Score = 36.2 bits (18), Expect = 0.054
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 749 tatatttattttaaaaaa 766
||||||||||||||||||
Sbjct: 749 tatatttattttaaaaaa 766


>Contig-U11181-1 (Contig-U11181-1Q) /CSM_Contig/Contig-U11181-1Q.Seq.d
Length = 2109

Score = 52.0 bits (26), Expect = 9e-07
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 271 caacaacaaccaccactaccaccacc 296
||||||||||||||||||||||||||
Sbjct: 1136 caacaacaaccaccactaccaccacc 1161


Score = 36.2 bits (18), Expect = 0.054
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 279 accaccactaccaccacc 296
||||||||||||||||||
Sbjct: 1969 accaccactaccaccacc 1986


>Contig-U11500-1 (Contig-U11500-1Q) /CSM_Contig/Contig-U11500-1Q.Seq.d
Length = 1176

Score = 50.1 bits (25), Expect = 4e-06
Identities = 31/33 (93%)
Strand = Plus / Plus


Query: 260 taataataattcaacaacaaccaccactaccac 292
|||||||||||||||||| |||||||| |||||
Sbjct: 1039 taataataattcaacaaccaccaccaccaccac 1071


Score = 36.2 bits (18), Expect = 0.054
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 274 caacaaccaccactaccaccac 295
||||||||||||| ||||||||
Sbjct: 1050 caacaaccaccaccaccaccac 1071


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,153
Number of Sequences: 6905
Number of extensions: 16153
Number of successful extensions: 2745
Number of sequences better than 10.0: 486
length of query: 766
length of database: 5,674,871
effective HSP length: 16
effective length of query: 750
effective length of database: 5,564,391
effective search space: 4173293250
effective search space used: 4173293250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.16
Homology vs DNA
Query= Contig-U04327-1 (Contig-U04327-1Q) /CSM_Contig/Contig-U04327-1Q.Seq.d
(766 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU075950) Dictyostelium discoideum slug cDNA, clone SSA190. 1134 0.0 3
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 1088 0.0 3
(C24682) Dictyostelium discoideum slug cDNA, clone SL-X090. 1082 0.0 3
(AU051970) Dictyostelium discoideum slug cDNA, clone SSC256. 1047 0.0 2
(FG367705) CBHF4549.fwd CBHF Trichoderma virens strain Gv29-... 44 3e-05 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 40 1e-04 9
(AC184341) Strongylocentrotus purpuratus clone R3-3072I14, W... 46 1e-04 2
(BZ071084) lkg04b02.b1 B.oleracea002 Brassica oleracea genom... 50 2e-04 3
(EV182720) 0156219 Brassica napus Etiolated seedlings (pSPOR... 50 2e-04 3
(BI417526) LjNEST30c4r Lotus japonicus nodule library 5 and ... 52 2e-04 2
(BW597956) Lotus japonicus cDNA, clone: LjCa-012-DC05, 5' en... 52 3e-04 2
(BI420470) LjNEST57e11r Lotus japonicus nodule library 5 and... 52 3e-04 2
(BI417687) LjNEST34c3r Lotus japonicus nodule library 5 and ... 52 3e-04 2
(BI418582) LjNEST43d6r Lotus japonicus nodule library 5 and ... 52 3e-04 2
(BI419267) LjNEST44c8r Lotus japonicus nodule library 5 and ... 52 3e-04 2
(BI419149) LjNEST35h6r Lotus japonicus nodule library 5 and ... 52 3e-04 2
(GO006587) LJGA468TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA ... 52 4e-04 2
(GO013660) LJGA468TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA ... 52 4e-04 2
(FE732402) SB06009B2E10.f1 Normalized subtracted Keck-Tagu L... 58 5e-04 1
(BP904041) Solanum lycopersicum cDNA, clone: LB10CB02, 5' en... 54 0.001 2
(BP904661) Solanum lycopersicum cDNA, clone: LB12AF11, 5' en... 54 0.001 2
(BP904867) Solanum lycopersicum cDNA, clone: LB12CH03, 5' en... 54 0.001 2
(DB679191) Solanum lycopersicum cDNA, clone: LEFL1003CB07, 5... 54 0.001 2
(GO013104) LJGC655TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA ... 50 0.001 2
(BW686159) Solanum lycopersicum cDNA, clone: FC05AF06, 5' en... 54 0.002 2
(DB684431) Solanum lycopersicum cDNA, clone: LEFL1019DD11, 5... 54 0.002 2
(BG128592) EST474238 tomato shoot/meristem Solanum lycopersi... 54 0.002 2
(EE674311) EST1423 Mycelia Grown in Nitrogen Limited Media C... 48 0.002 3
(AK247432) Solanum lycopersicum cDNA, clone: LEFL1019DD11, H... 54 0.002 2
(AK247352) Solanum lycopersicum cDNA, clone: LEFL1003CB07, H... 54 0.002 2
(AC180485) Strongylocentrotus purpuratus clone R3-3011H14, W... 56 0.002 1
(AC176393) Strongylocentrotus purpuratus clone R3-3012P16, W... 56 0.002 1
(AC168703) Strongylocentrotus purpuratus clone R3-3011N14, W... 56 0.002 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 38 0.005 10
(AC107845) Mus musculus clone RP23-308C7, WORKING DRAFT SEQU... 50 0.005 2
(EE417325) 58ACPE48_UP_004_C08_20SEP2004_060 Brassica napus ... 50 0.005 2
(FD664758) CBBT442.rev CBBT Mycosphaerella fijiensis MfEST3 ... 42 0.007 2
(FD675380) CBHU439.fwd CBHU Mycosphaerella fijiensis MfEST3 ... 42 0.007 2
(FD674459) CBHU3374.rev CBHU Mycosphaerella fijiensis MfEST3... 42 0.007 2
(FD672548) CBHU2308.rev CBHU Mycosphaerella fijiensis MfEST3... 42 0.007 2
(CT009525) Mouse DNA sequence from clone RP23-65F10 on chrom... 54 0.008 1
(AC134987) Mus musculus BAC clone RP23-117E24 from 14, compl... 54 0.008 1
(CU607053) Podospora anserina genomic DNA chromosome 5, supe... 54 0.008 1
(BX088700) DNA centromeric region sequence from BAC DP26B06,... 54 0.008 1
(AM910987) Plasmodium knowlesi strain H chromosome 5, comple... 54 0.008 1
(EG010307) SSBT004E05x SSBT Solanum tuberosum cDNA clone SSB... 54 0.008 1
(DV626921) 97447.1 Cold Sweetening C Solanum tuberosum cDNA ... 54 0.008 1
(CU913401) Podospora anserina mRNA sequence from clone HH0AB... 54 0.008 1
(CU901174) Podospora anserina mRNA sequence from clone HH0AB... 54 0.008 1
(AC203326) Zea mays chromosome 3 clone CH201-140D14; ZMMBBc0... 44 0.009 4
(AV419498) Lotus japonicus cDNA clone:MWM170e09_r, 5' end. 46 0.010 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 38 0.011 11
(AC175958) Strongylocentrotus purpuratus clone R3-3035L09, W... 38 0.012 6
(AV426242) Lotus japonicus cDNA clone:MWM064e05_r, 5' end. 46 0.013 2
(AV413220) Lotus japonicus cDNA clone:MWM229h11_r, 5' end. 46 0.013 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 34 0.013 14
(AV424713) Lotus japonicus cDNA clone:MWM044e02_r, 5' end. 46 0.013 2
(DC596259) Lotus japonicus mRNA, clone: MPD010e02_r, 5' end ... 46 0.014 2
(AV772290) Lotus japonicus cDNA clone:MPD033h05_f, 3' end. 46 0.016 2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 42 0.018 8
(BH578512) BOGEE90TF BOGE Brassica oleracea genomic clone BO... 42 0.021 3
(AC112284) Rattus norvegicus clone CH230-95A2, WORKING DRAFT... 52 0.024 2
(AC107466) Rattus norvegicus clone CH230-110F19, WORKING DRA... 52 0.025 2
(AC117921) Rattus norvegicus clone CH230-130J10, WORKING DRA... 52 0.025 4
(AC175960) Strongylocentrotus purpuratus clone R3-17E05, WOR... 42 0.025 6
(AL935308) Zebrafish DNA sequence from clone CH211-227H7 in ... 52 0.032 1
(BV726497) TcSI_049 Carolina Hemlock nuclear microsatellite ... 52 0.032 1
(BV119633) PZA01361 CML322 Zea mays CML322 Zea mays STS geno... 52 0.032 1
(BV119628) PZA01361 CML247 Zea mays CML247 Zea mays STS geno... 52 0.032 1
(EU416877) Trifolium repens clone CloverSSR-036_D04_013_1 mi... 52 0.032 1
(EF372592) Phaeocryptopus gaeumannii microsatellite marker P... 52 0.032 1
(AL590416) Human DNA sequence from clone RP11-89C21 on chrom... 52 0.032 1
(AC126526) Rattus norvegicus clone CH230-240E2, WORKING DRAF... 52 0.032 1
(AC125985) Rattus norvegicus clone CH230-125G9, WORKING DRAF... 52 0.032 1
(AC119550) Rattus norvegicus clone CH230-67E6, *** SEQUENCIN... 52 0.032 1
(AC116282) Rattus norvegicus clone CH230-22N13, WORKING DRAF... 52 0.032 1
(AC113891) Rattus norvegicus clone CH230-319O9, *** SEQUENCI... 52 0.032 1
(AC106543) Rattus norvegicus clone CH230-89P11, WORKING DRAF... 52 0.032 1
(AC204186) Nomascus leucogenys leucogenys clone CH271-9A6, W... 52 0.032 1
(AC195539) Zea mays chromosome 5 clone CH201-418G23; ZMMBBc0... 52 0.032 1
(AC181502) Strongylocentrotus purpuratus clone R3-1111D7, WO... 52 0.032 1
(AC181137) Strongylocentrotus purpuratus clone R3-16F9, WORK... 52 0.032 1
(AC179737) Strongylocentrotus purpuratus clone R3-1018I01, W... 52 0.032 1
(AC178725) Strongylocentrotus purpuratus clone R3-3002N5, WO... 52 0.032 1
(AC178525) Strongylocentrotus purpuratus clone R3-3032J21, W... 52 0.032 1
(AC168616) Strongylocentrotus purpuratus clone R3-3046F7, WO... 52 0.032 1
(AZ928926) 479.dif19g12.s1 Saccharomyces kluyveri Lachancea ... 52 0.032 1
(AQ399713) mgxb0008D12f CUGI Rice Blast BAC Library Magnapor... 52 0.032 1
(ER301425) 1092343697937 Global-Ocean-Sampling_GS-34-01-01-1... 52 0.032 1
(DE104569) Oryzias latipes DNA, clone: ola1-222A11.R, genomi... 52 0.032 1
(EH270055) Gp_mxAB_11D04_M13R mxA Gammarus pulex cDNA clone ... 52 0.032 1
(EG695704) RCSBQ59TP Castor bean cDNA library from seeds (12... 52 0.032 1
(EG694661) RCSBF52TP Castor bean cDNA library from seeds (12... 52 0.032 1
(DT602446) wmi03-1ms1-h01 Wmi03 Welwitschia mirabilis cDNA c... 52 0.032 1
(DT585125) wmi03-12ms4-e10 Wmi03 Welwitschia mirabilis cDNA ... 52 0.032 1
(DT584228) wmi03-15ms3-e04 Wmi03 Welwitschia mirabilis cDNA ... 52 0.032 1
(DC887079) Citrus nobilis x Citrus kinokuni mRNA, clone: EGJ... 52 0.032 1
(CX900859) JGI_CAAM9389.fwd NIH_XGC_tropTe3 Xenopus (Siluran... 52 0.032 1
(CX711715) gmrtDrNS01_37-D_M13R_C11_091.s1 Water stressed 5h... 52 0.032 1
(CX258486) 1311684 NCCCWA 02RT Oncorhynchus mykiss cDNA clon... 52 0.032 1
(CK828292) ESTs82 Magnaporthe grisea Appressorium Stage SSH ... 52 0.032 1
(CK760727) wmi01-10ms1-a04 Wmi01 Welwitschia mirabilis cDNA ... 52 0.032 1
(CJ779969) Triticum aestivum cDNA clone:whatl30j09, 5' end. 52 0.032 1
(CF725182) UI-M-GZ0-cjo-l-01-0-UI.r1 NIH_BMAP_GZ0 Mus muscul... 52 0.032 1
(CF724890) UI-M-GZ0-cjl-f-04-0-UI.r1 NIH_BMAP_GZ0 Mus muscul... 52 0.032 1
(BJ400238) Dictyostelium discoideum cDNA clone:dds9k09, 3' e... 52 0.032 1
(GH722877) AZO3.100K07R011122 AZO3 Triticum aestivum cDNA cl... 52 0.032 1
(GE632671) LINN_XX_019_I01_LINN19.CR_I01 R. communis develop... 52 0.032 1
(FF099474) CPAD-aac40h06.b1 PB2801_EST_CPAD1 Caenorhabditis ... 52 0.032 1
(FF081848) CPAD-aaa09a07.b1 PB2801_EST_CPAD1 Caenorhabditis ... 52 0.032 1
(FC865763) PPN037B06-T7 PPN Prunus persica cDNA clone PPN037... 52 0.032 1
(AW760336) sl49a06.y1 Gm-c1027 Glycine max cDNA clone GENOME... 52 0.032 1
(EV522834) JB2_56_C05 Castor seed endosperm Ricinus communis... 52 0.032 1
(L15420) Dictyostelium discoideum protein tyrosine phosphata... 34 0.056 4
(AC180198) Strongylocentrotus purpuratus clone R3-3G17, WORK... 40 0.056 4
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 40 0.065 6
(DW528604) CYLA_6322 cynomolgus monkey B lymphocytes library... 44 0.076 2
(AC163450) Mus musculus chromosome 1, clone RP23-209F20, com... 46 0.080 3
(BC155835) Danio rerio membrane-associated ring finger (C3HC... 44 0.084 2
(EB521062) 294724 Pigtailed macaque ovary library Macaca nem... 44 0.089 2
(EB516838) 289894 Pigtailed macaque ovary library Macaca nem... 44 0.090 2
(CR382400) Plasmodium falciparum chromosome 6, complete sequ... 36 0.098 7
(AC177525) Strongylocentrotus purpuratus clone R3-9O6, WORKI... 40 0.11 4
(BC163606) Danio rerio membrane-associated ring finger (C3HC... 44 0.12 2
(CW926171) EDCBE77TR A. castellanii, 6-8 kb library from tot... 48 0.12 2
(AL929459) Zebrafish DNA sequence from clone CH211-277I17 in... 50 0.13 1
(AL929441) Mouse DNA sequence from clone RP23-418E20 on chro... 50 0.13 1
(AC165280) Mus musculus chromosome 3, clone RP23-389C4, comp... 50 0.13 1
(AC121099) Mus musculus chromosome 3, clone RP24-501F21, com... 50 0.13 1
(AE017343) Cryptococcus neoformans var. neoformans JEC21 chr... 50 0.13 1
(AC148873) Chlamydomonas reinhardtii clone cr-7K15, complete... 50 0.13 1
(DL124685) Diagnosis of existing illnesses or that praedispo... 50 0.13 1
(DL124684) Diagnosis of existing illnesses or that praedispo... 50 0.13 1
(DL048050) Diagnosis of existing illnesses or that praedispo... 50 0.13 1
(DL048049) Diagnosis of existing illnesses or that praedispo... 50 0.13 1
(CS374576) Sequence 679 from Patent WO2006034879. 50 0.13 1
(GM660514) Sequence 39036 from Patent EP1942197. 50 0.13 1
(GM660513) Sequence 39035 from Patent EP1942197. 50 0.13 1
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 50 0.13 1
(AC122629) Rattus norvegicus clone CH230-102A4, WORKING DRAF... 50 0.13 1
(AC120092) Rattus norvegicus clone CH230-420B3, *** SEQUENCI... 50 0.13 1
(AC109988) Rattus norvegicus clone CH230-232G8, *** SEQUENCI... 50 0.13 1
(AC096003) Rattus norvegicus clone CH230-12A16, WORKING DRAF... 50 0.13 1
(AC094224) Rattus norvegicus clone CH230-2P18, *** SEQUENCIN... 50 0.13 1
(AC200568) Zea mays chromosome 1 clone CH201-124A4; ZMMBBc01... 50 0.13 1
(AC194598) Zea mays chromosome 1 clone CH201-5C22; ZMMBBc000... 50 0.13 1
(AC184276) Strongylocentrotus purpuratus clone R3-3013D24, W... 50 0.13 1
(AC176730) Strongylocentrotus purpuratus clone R3-3096N14, W... 50 0.13 1
(AC168442) Strongylocentrotus purpuratus clone R3-39D21, WOR... 50 0.13 1
(ER737352) SB_BBc162-I01.F SB_BBc Sorghum bicolor genomic 5'... 50 0.13 1
(DX800748) 3647218 VV10 Chlamydomonas reinhardtii genomic cl... 50 0.13 1
(AG987829) Hemicentrotus pulcherrimus BAC clone: BUB1-10O22_... 50 0.13 1
(BZ264749) CH230-509G7.TV CHORI-230 Segment 2 Rattus norvegi... 50 0.13 1
(EL552236) EST_otsh_evc_405 otshevc mixed_tissue Oncorhynchu... 50 0.13 1
(EH746469) CNMS5964.b1_G04.ab1 CNM(LMS) spotted knapweed Cen... 50 0.13 1
(EH720670) CNML7081.b1_B19.ab1 CNM(LMS) spotted knapweed Cen... 50 0.13 1
(EG329693) PMAO-aae07a05.g1 Lamprey_EST_Embryo Petromyzon ma... 50 0.13 1
(DY651995) PU4_plate55_A06 PU4 Prunus persica cDNA similar t... 50 0.13 1
(DC533570) Bombyx mori cDNA, clone:E_ET_J150_11A05_R_0, 3' e... 50 0.13 1
(AU002123) Bombyx mori cDNA, clone mg0515. 50 0.13 1
(BY929584) Bombyx mori cDNA, clone:E_ET_JFsb_03D08_R_0, 3' e... 50 0.13 1
(BY921104) Bombyx mori cDNA, clone:E_ET_JFsb_03D08_F_0, 5' e... 50 0.13 1
(BU614057) UI-M-FR0-cbb-d-17-0-UI.r1 NIH_BMAP_FR0 Mus muscul... 50 0.13 1
(BJ446788) Dictyostelium discoideum cDNA clone:ddv63h21, 3' ... 50 0.13 1
(BJ438334) Dictyostelium discoideum cDNA clone:ddv37i17, 3' ... 50 0.13 1
(BJ427859) Dictyostelium discoideum cDNA clone:ddv63h21, 5' ... 50 0.13 1
(BJ380914) Dictyostelium discoideum cDNA clone:ddc39a19, 3' ... 50 0.13 1
(BJ356287) Dictyostelium discoideum cDNA clone:dda59i20, 3' ... 50 0.13 1
(H74544) 495 Random-primed Brassica napus cDNA clone RRM1205... 50 0.13 1
(GE606156) CCPX3241.b1_B19.ab1 CCP(UWX) Globe Artichoke Cyna... 50 0.13 1
(FG089290) CMRC-FF-IH0-acn-i-12-0-CMRC.r1 Ceratitis capitata... 50 0.13 1
(FG088979) CMRC-FF-IH0-acm-k-22-0-CMRC.r1 Ceratitis capitata... 50 0.13 1
(FG069806) UI-FF-IF0-aae-k-19-0-UI.r1 Ceratitis capitata emb... 50 0.13 1
(FD668960) CBHT3329.rev CBHT Mycosphaerella fijiensis MfEST3... 50 0.13 1
(EY160356) CBTN7981.b1_J04.ab1:P Triphysaria pusilla root ti... 50 0.13 1
(EY160310) CBTN7960.b1_O22.ab1:P Triphysaria pusilla root ti... 50 0.13 1
(EY157120) CBTN6506.b1_D20.ab1:P Triphysaria pusilla root ti... 50 0.13 1
(EY155280) CBTN5667.b1_F02.ab1:P Triphysaria pusilla root ti... 50 0.13 1
(EY150617) CBTN12726.b1_K13.ab1:P Triphysaria pusilla root t... 50 0.13 1
(EX863944) CBNF7240.fwd CBNF Phycomyces blakesleeanus NRRL15... 50 0.13 1
(EX863943) CBNF7240.rev CBNF Phycomyces blakesleeanus NRRL15... 50 0.13 1
(EX853805) CBNF10330.fwd CBNF Phycomyces blakesleeanus NRRL1... 50 0.13 1
(EX829752) CBNB1961.fwd CBNB Phycomyces blakesleeanus NRRL15... 50 0.13 1
(EX829647) CBNB1906.fwd CBNB Phycomyces blakesleeanus NRRL15... 50 0.13 1
(EX829646) CBNB1906.rev CBNB Phycomyces blakesleeanus NRRL15... 50 0.13 1
(EX813164) CBNA3340.rev CBNA Phycomyces blakesleeanus NRRL15... 50 0.13 1
(EV182649) 0156077 Brassica napus Etiolated seedlings (pSPOR... 50 0.13 1
(AC176257) Strongylocentrotus purpuratus clone R3-3060L24, W... 44 0.14 4
(AC139459) Homo sapiens chromosome 5 clone RP11-1069F21, WOR... 42 0.15 4
(AC176199) Strongylocentrotus purpuratus clone R3-3066G23, W... 44 0.16 7
(AB173895) Macaca fascicularis brain cDNA clone: QmoA-10959,... 44 0.17 2
(AC189751) Zea mays chromosome 10 clone CH201-527M23; ZMMBBc... 46 0.19 2
(BJ347063) Dictyostelium discoideum cDNA clone:dda26b03, 3' ... 46 0.19 2
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 38 0.21 16
(AL645757) Mouse DNA sequence from clone DN-340J1 on chromos... 44 0.22 4
(AU033967) Dictyostelium discoideum slug cDNA, clone SLB671. 46 0.22 2
(EX034610) BR019254 callus cDNA library KBCG Brassica rapa s... 46 0.22 2
(EX029451) BR014095 callus cDNA library KBCG Brassica rapa s... 46 0.22 2
(AU060842) Dictyostelium discoideum slug cDNA, clone SLB671. 46 0.24 2
(AB169890) Macaca fascicularis brain cDNA, clone: QnpA-17735... 44 0.25 2
(AU035031) Dictyostelium discoideum slug cDNA, clone SLE522. 44 0.27 2
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 38 0.28 2
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 34 0.28 7
(AL606744) Mouse DNA sequence from clone RP23-267O21 on chro... 44 0.29 3
(CV268721) WS0206.B21_E07 PTxN-IB-N-A-11 Populus trichocarpa... 46 0.29 2
(EH421644) OL5076R Brassica oleracea var. alboglabra leaf cD... 40 0.29 2
(CO750373) KBrAE006F11c A leaf cDNA library of Chinese Cabba... 46 0.30 2
(EX094551) BR080841 infected leaf cDNA library KFPC Brassica... 46 0.30 2
(FE242318) CAPG711.fwd CAPG Naegleria gruberi amoeba stage N... 46 0.30 2
(GD199220) G1045P390FO7.T1 Aplysia californica Pooled Normal... 40 0.34 2
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 34 0.34 15
(FE233270) CAPG2194.fwd CAPG Naegleria gruberi amoeba stage ... 46 0.35 2
(EA160143) Sequence 24458 from patent US 7214786. 38 0.37 2
(CA685789) wlm96.pk031.m15 wlm96 Triticum aestivum cDNA clon... 38 0.37 2
(FE245408) CAPG8861.fwd CAPG Naegleria gruberi amoeba stage ... 46 0.38 2
(AC177431) Strongylocentrotus purpuratus clone R3-54M15, WOR... 44 0.38 5
(CR387925) Human DNA sequence from clone RP11-58A12 on chrom... 40 0.40 4
(AC130957) Rattus norvegicus clone CH230-49F9, *** SEQUENCIN... 46 0.41 4
(AL591385) Human DNA sequence from clone RP11-391M20 on chro... 40 0.41 4
(AC114623) Mus musculus clone RP24-104G17, WORKING DRAFT SEQ... 46 0.42 5
(AC206105) Saccoglossus kowalevskii BAC CUGI_SK_BA 001A20 (... 40 0.49 2
(AJ812237) Dictyostelium discoideum mRNA for diaphanous-rela... 34 0.49 5
(BT060206) Salmo salar clone ssal-rgh-509-015 High mobility ... 48 0.50 1
(BT059754) Salmo salar clone ssal-rgf-520-373 High mobility ... 48 0.50 1
(BT058498) Salmo salar clone Contig1391 High mobility group-... 48 0.50 1
(BT057668) Salmo salar clone ssal-eve-504-273 High mobility ... 48 0.50 1
(BT057530) Salmo salar clone ssal-evd-562-348 High mobility ... 48 0.50 1
(BT057363) Salmo salar clone ssal-eve-569-219 High mobility ... 48 0.50 1
(BT056810) Salmo salar clone ssal-evd-512-033 High mobility ... 48 0.50 1
(AF107563) Mus musculus Cast (Cast) and peroxisomal membrane... 48 0.50 1
(AF097512) Mus musculus peroxisomal protein (Pex14) mRNA, co... 48 0.50 1
(AC140322) Mus musculus BAC clone RP23-413F14 from chromosom... 48 0.50 1
(AC132911) Mus musculus chromosome 17, clone RP24-358A14, co... 48 0.50 1
(AC016522) Mus musculus chromosome 7, clone RP23-352D23, com... 48 0.50 1
(AC198645) Pongo abelii BAC clone CH276-79N12 from chromosom... 48 0.50 1
(CR380954) Candida glabrata strain CBS138 chromosome H compl... 48 0.50 1
(AL113504) Botrytis cinerea strain T4 cDNA library. 48 0.50 1
(GC537767) Sequence 2199 from patent US 7413875. 48 0.50 1
(FB627112) Sequence 42835 from Patent WO2004081186. 48 0.50 1
(FB596649) Sequence 12372 from Patent WO2004081186. 48 0.50 1
(FB596548) Sequence 12271 from Patent WO2004081186. 48 0.50 1
(FB584587) Sequence 310 from Patent WO2004081186. 48 0.50 1
(DL209910) Full length cDNA. 48 0.50 1
(CQ845855) Sequence 4502 from Patent EP1440981. 48 0.50 1
(CQ344498) Sequence 18592 from Patent WO0157275. 48 0.50 1
(CQ331708) Sequence 5802 from Patent WO0157275. 48 0.50 1
(CQ307644) Sequence 18749 from Patent WO0186003. 48 0.50 1
(CQ295077) Sequence 6182 from Patent WO0186003. 48 0.50 1
(CQ270409) Sequence 18670 from Patent WO0157277. 48 0.50 1
(CQ257791) Sequence 6052 from Patent WO0157277. 48 0.50 1
(CQ232330) Sequence 19169 from Patent WO0157273. 48 0.50 1
(CQ219270) Sequence 6109 from Patent WO0157273. 48 0.50 1
(CQ149056) Sequence 19078 from Patent WO0157276. 48 0.50 1
(CQ135972) Sequence 5994 from Patent WO0157276. 48 0.50 1
(CQ110338) Sequence 19197 from Patent WO0157272. 48 0.50 1
(CQ097154) Sequence 6013 from Patent WO0157272. 48 0.50 1
(BD110115) EST and encoded human protein. 48 0.50 1
(AX971396) Sequence 2199 from Patent EP1104808. 48 0.50 1
(AR414562) Sequence 2199 from patent US 6639063. 48 0.50 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 48 0.50 1
(BX648184) Homo sapiens mRNA; cDNA DKFZp686L13129 (from clon... 48 0.50 1
(BC053533) Homo sapiens MTERF domain containing 2, mRNA (cDN... 48 0.50 1
(AK294192) Homo sapiens cDNA FLJ59868 complete cds, highly s... 48 0.50 1
(AK291665) Homo sapiens cDNA FLJ75724 complete cds, highly s... 48 0.50 1
(AK131298) Homo sapiens cDNA FLJ16261 fis, clone IMR322007078. 48 0.50 1
(AC005237) Homo sapiens BAC clone RP11-556H17 from 2, comple... 48 0.50 1
(AC155169) Mus musculus chromosome 14 clone RP23-130E18, WOR... 48 0.50 1
(AC139475) Homo sapiens chromosome 5 clone RP11-325C13, WORK... 48 0.50 1
(AC120277) Rattus norvegicus clone CH230-171B18, *** SEQUENC... 48 0.50 1
(AC113694) Rattus norvegicus clone CH230-96H12, *** SEQUENCI... 48 0.50 1
(AC106121) Rattus norvegicus clone CH230-115E13, *** SEQUENC... 48 0.50 1
(AC036234) Homo sapiens chromosome 1 clone RP11-12H2, WORKIN... 48 0.50 1
(AL672289) Human DNA sequence *** SEQUENCING CANCELLED *** f... 48 0.50 1
(AC233625) Solanum tuberosum strain Diploid genotype RH89-03... 48 0.50 1
(AC233603) Solanum tuberosum strain Diploid genotype RH89-03... 48 0.50 1
(AC211538) Pongo abelii chromosome UNKNOWN clone CH276-54P7,... 48 0.50 1
(AC184689) Strongylocentrotus purpuratus clone R3-1016F10, W... 48 0.50 1
(AC179796) Strongylocentrotus purpuratus clone R3-1014K20, W... 48 0.50 1
(AC178535) Strongylocentrotus purpuratus clone R3-3031B09, W... 48 0.50 1
(AC177751) Strongylocentrotus purpuratus clone R3-1008A19, W... 48 0.50 1
(AC176268) Strongylocentrotus purpuratus clone R3-3057O9, WO... 48 0.50 1
(AC023017) Homo sapiens chromosome 1 clone RP11-132M13 map 1... 48 0.50 1
(CR622447) full-length cDNA clone CS0DC010YC23 of Neuroblast... 48 0.50 1
(CR617083) full-length cDNA clone CS0DI071YA05 of Placenta C... 48 0.50 1
(CR615652) full-length cDNA clone CS0DF037YL05 of Fetal brai... 48 0.50 1
(CR607675) full-length cDNA clone CS0DF022YI07 of Fetal brai... 48 0.50 1
(CR590225) full-length cDNA clone CS0DC003YH23 of Neuroblast... 48 0.50 1
(BH495672) BOGSJ82TR BOGS Brassica oleracea genomic clone BO... 48 0.50 1
(AZ409522) 1M0181K11F Mouse 10kb plasmid UUGC1M library Mus ... 48 0.50 1
(AQ602677) HS_2132_A1_B02_MR CIT Approved Human Genomic Sper... 48 0.50 1
(Z86834) F.rubripes GSS sequence, clone 017C12aC2. 48 0.50 1
(ET607560) fcg3x.607450c09 C. graminicola genomic sequence G... 48 0.50 1
(ET541625) fcg3x.221650k09.f C. graminicola genomic sequence... 48 0.50 1
(DH230527) Oryzias latipes Fosmid clone:GOLWFno563_j01, forw... 48 0.50 1
(DE279036) Oryzias latipes DNA, clone: ola1-232L22.R, genomi... 48 0.50 1
(AG955991) Drosophila sechellia DNA, clone: DSE1-010N13.R.fa... 48 0.50 1
(ES325244) Ss_Rev2_05E01_T3 Reverse subtracted library from ... 48 0.50 1
(EL737986) CE29 potato leaf and in vitro plantlets Solanum t... 48 0.50 1
(EH745880) CNMS5424.b1_O11.ab1 CNM(LMS) spotted knapweed Cen... 48 0.50 1
(EH744487) CNMS415.b2_M07.ab1 CNM(LMS) spotted knapweed Cent... 48 0.50 1
(EH742886) CNMS2568.b1_O18.ab1 CNM(LMS) spotted knapweed Cen... 48 0.50 1
(EH742421) CNMS2100.b1_H21.ab1 CNM(LMS) spotted knapweed Cen... 48 0.50 1
(EG922138) EST_ssal_evf_1281 ssalevf mixed_tissue Salmo sala... 48 0.50 1
(EG880569) EST_ssal_eve_23873 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG878944) EST_ssal_eve_22410 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG857542) EST_ssal_eve_51079 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG856771) EST_ssal_eve_50384 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG856770) EST_ssal_eve_50383 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG841451) EST_ssal_eve_4200 ssaleve thyroid Salmo salar cDN... 48 0.50 1
(EG841450) EST_ssal_eve_4199 ssaleve thyroid Salmo salar cDN... 48 0.50 1
(EG833316) EST_ssal_eve_45277 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG833315) EST_ssal_eve_45276 ssaleve thyroid Salmo salar cD... 48 0.50 1
(EG789583) EST_ssal_evd_9944 ssalevd thymus Salmo salar cDNA... 48 0.50 1
(EG778186) EST_ssal_evd_4751 ssalevd thymus Salmo salar cDNA... 48 0.50 1
(EG771154) EST_ssal_evd_46823 ssalevd thymus Salmo salar cDN... 48 0.50 1
(EG771153) EST_ssal_evd_46822 ssalevd thymus Salmo salar cDN... 48 0.50 1
(EG556892) CR02024G07 Leaf CR02 cDNA library Catharanthus ro... 48 0.50 1
(EC344282) KIDNEYF089691C4 POSSUM_01-POSSUM-KIDNEY-2KB Trich... 48 0.50 1
(AV778238) Lotus japonicus cDNA clone:MPDL035d03_f, 3' end. 48 0.50 1
(AV776110) Lotus japonicus cDNA clone:MPD093e06_f, 3' end. 48 0.50 1
(AV775454) Lotus japonicus cDNA clone:MPD083e02_f, 3' end. 48 0.50 1
(AV766693) Lotus japonicus cDNA clone:MWM123a10_f, 3' end. 48 0.50 1
(EB242245) PEG003-C-219072-501 Normalized Pedal-Pleural Gang... 48 0.50 1
(EB236277) PEG003-C-211435-501 Normalized Pedal-Pleural Gang... 48 0.50 1
(DY974051) CLSM7713.b1_A09.ab1 CLS(LMS) lettuce sativa Lactu... 48 0.50 1
(DY718997) EST_ssal_rgb2_74736 ssalrgb2 mixed_tissue Salmo s... 48 0.50 1
(DW566524) EST_ssal_rgb2_30943 rgb2 Salmo salar cDNA clone s... 48 0.50 1
(DW538922) EST_ssal_rgb2_3341 rgb2 Salmo salar cDNA clone ss... 48 0.50 1
(DW536180) EST_ssal_rgb2_599 rgb2 Salmo salar cDNA clone ssa... 48 0.50 1
(DW532638) EST_ssal_plnb_1274 plnb Salmo salar cDNA clone ss... 48 0.50 1
(DT685733) s13dFA19B09FM073_105192 Tall fescue, Festuca arun... 48 0.50 1
(AU284715) Dictyostelium discoideum gamete cDNA clone:FC-BI0... 48 0.50 1
(DB984484) Glycine max cDNA, clone: GMFL02-33-L24, 3'end. 48 0.50 1
(DB518143) Homo sapiens testis cDNA, RIKEN full-length enric... 48 0.50 1
(DB320101) Homo sapiens cDNA clone IMR322007078, 3' end, mRN... 48 0.50 1
(AU033934) Dictyostelium discoideum slug cDNA, clone SLB630. 48 0.50 1
(AU033932) Dictyostelium discoideum slug cDNA, clone SLB628. 48 0.50 1
(AU033615) Dictyostelium discoideum slug cDNA, clone SLB232. 48 0.50 1
(DA335554) Homo sapiens cDNA clone BRHIP3035564, 5' end, mRN... 48 0.50 1
(CX356405) ssalrgb545051_rev_0 mixed_tissue Salmo salar cDNA... 48 0.50 1
(CO984189) GM89021B1A07.r1 Gm-r1089 Glycine max cDNA clone G... 48 0.50 1
(AL566167) human full-length cDNA 3-PRIME end of clone CS0DF... 48 0.50 1
(CN057178) Salamander_27_B19.ab1 AG Ambystoma tigrinum tigri... 48 0.50 1
(CK893714) SGP153807 Atlantic salmon Spleen cDNA library Sal... 48 0.50 1
(CK884100) SGP147960 Atlantic salmon Intestine cDNA library ... 48 0.50 1
(CK814890) Rasgsc5659 Salivary Gland 4th instar 3rd period (... 48 0.50 1
(CK812798) Rasgsc1846 Salivary Gland 4th instar 3rd period (... 48 0.50 1
(CK811592) Rasgsc7447 Salivary Gland 4th instar 3rd period (... 48 0.50 1
(CK809576) Rasgsc3224 Salivary Gland 4th instar 3rd period (... 48 0.50 1
(AL544992) human full-length cDNA 3-PRIME end of clone CS0DI... 48 0.50 1
(AL538918) human full-length cDNA 3-PRIME end of clone CS0DF... 48 0.50 1
(AL524714) human full-length cDNA 3-PRIME end of clone CS0DC... 48 0.50 1
(AL523957) human full-length cDNA 3-PRIME end of clone CS0DC... 48 0.50 1
(CB510858) ssalnwh507093 whole Salmo salar cDNA, mRNA sequence. 48 0.50 1
(CA053129) ssalrgb515291 mixed_tissue Salmo salar cDNA, mRNA... 48 0.50 1
(CA045619) ssalpitl505105 head Salmo salar cDNA, mRNA sequence. 48 0.50 1
(C95950) Marchantia polymorpha immature archegonia cDNA, clo... 48 0.50 1
(C90747) Dictyostelium discoideum slug cDNA, clone SSJ103. 48 0.50 1
(AI681562) tx47g07.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 48 0.50 1
(AI609218) tw83b06.x1 NCI_CGAP_HN5 Homo sapiens cDNA clone I... 48 0.50 1
(BX453856) human full-length cDNA 3-PRIME end of clone CL0BA... 48 0.50 1
(BX447167) human full-length cDNA 5-PRIME end of clone CL0BB... 48 0.50 1
(BX447166) human full-length cDNA 3-PRIME end of clone CL0BB... 48 0.50 1
(BX436039) human full-length cDNA 3-PRIME end of clone CS0DH... 48 0.50 1
(BX425827) human full-length cDNA 5-PRIME end of clone CL0BB... 48 0.50 1
(BX421812) human full-length cDNA 3-PRIME end of clone CS0DH... 48 0.50 1
(BU675085) UI-CF-DU1-aaf-m-11-0-UI.s1 UI-CF-DU1 Homo sapiens... 48 0.50 1
(BU577670) sar90h10.y1 Gm-c1074 Glycine max cDNA clone SOYBE... 48 0.50 1
(BQ606814) BRY_2689 wheat EST endosperm library Triticum aes... 48 0.50 1
(BP083339) Lotus japonicus cDNA, clone:MR096b05_f, 3' end. 48 0.50 1
(BP074640) Lotus japonicus cDNA, clone:GNf098e12, 3' end. 48 0.50 1
(BP072588) Lotus japonicus cDNA, clone:GNf071a01, 3' end. 48 0.50 1
(BP068393) Lotus japonicus cDNA, clone:GNf014f01, 3' end. 48 0.50 1
(BP048908) Lotus japonicus cDNA, clone:SPD062a10_f, 3' end. 48 0.50 1
(BP048831) Lotus japonicus cDNA, clone:SPD061b10_f, 3' end. 48 0.50 1
(BP045034) Lotus japonicus cDNA, clone:SPD013e02_f, 3' end. 48 0.50 1
(BP034988) Lotus japonicus cDNA, clone:MFB014h09_f, 3' end. 48 0.50 1
(BM973305) UI-CF-EC1-abx-c-05-0-UI.s1 UI-CF-EC1 Homo sapiens... 48 0.50 1
(BM968983) UI-CF-DU1-aal-f-08-0-UI.s1 UI-CF-DU1 Homo sapiens... 48 0.50 1
(BM678307) UI-E-EJ0-aif-n-23-0-UI.s1 UI-E-EJ0 Homo sapiens c... 48 0.50 1
(BM012164) 603636630F1 NIH_MGC_47 Homo sapiens cDNA clone IM... 48 0.50 1
(BM011613) 603635924F1 NIH_MGC_47 Homo sapiens cDNA clone IM... 48 0.50 1
(BJ871176) Marchantia polymorpha cDNA clone:lwb48o10, 5' end. 48 0.50 1
(BJ863195) Marchantia polymorpha cDNA clone:lwb26h10, 5' end. 48 0.50 1
(BJ861887) Marchantia polymorpha cDNA clone:lwb22f04, 5' end. 48 0.50 1
(BJ857678) Marchantia polymorpha cDNA clone:lwa9m20, 5' end. 48 0.50 1
(BJ853649) Marchantia polymorpha cDNA clone:lwa43a06, 5' end. 48 0.50 1
(BJ849682) Marchantia polymorpha cDNA clone:lwa33c12, 5' end. 48 0.50 1
(BJ849131) Marchantia polymorpha cDNA clone:lwa32a13, 5' end. 48 0.50 1
(BJ846567) Marchantia polymorpha cDNA clone:lwa25h12, 5' end. 48 0.50 1
(BJ844665) Marchantia polymorpha cDNA clone:lwa20k22, 5' end. 48 0.50 1
(BJ842180) Marchantia polymorpha cDNA clone:lwa14b18, 5' end. 48 0.50 1
(BJ840491) Marchantia polymorpha cDNA clone:lwa10e19, 5' end. 48 0.50 1
(BJ354624) Dictyostelium discoideum cDNA clone:dda54a09, 3' ... 48 0.50 1
(BJ347047) Dictyostelium discoideum cDNA clone:dda25o22, 3' ... 48 0.50 1
(BI093532) 602859538F1 NIH_MGC_10 Homo sapiens cDNA clone IM... 48 0.50 1
(BI007491) MR1-RT0079-260101-013-d07 RT0079 Homo sapiens cDN... 48 0.50 1
(BG109982) 602279369F1 NIH_MGC_86 Homo sapiens cDNA clone IM... 48 0.50 1
(AA907534) om09a07.s1 Soares_NFL_T_GBC_S1 Homo sapiens cDNA ... 48 0.50 1
(BF598879) sv23a03.y1 Gm-c1057 Glycine soja cDNA clone GENOM... 48 0.50 1
(BF590504) 7h36d06.x1 NCI_CGAP_Co16 Homo sapiens cDNA clone ... 48 0.50 1
(BF433407) 7q61d11.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 48 0.50 1
(BF196121) 7n46d12.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 48 0.50 1
(BE671340) 7e49f07.x1 NCI_CGAP_Lu24 Homo sapiens cDNA clone ... 48 0.50 1
(BE469577) IpHdk02081 Head kidney cDNA library Ictalurus pun... 48 0.50 1
(BE210128) so39b02.y1 Gm-c1039 Glycine max cDNA clone GENOME... 48 0.50 1
(GO058021) EST_ssal_rgh_1081455 ssalrgh mixed_tissue full-le... 48 0.50 1
(GO058020) EST_ssal_rgh_1088367 ssalrgh mixed_tissue full-le... 48 0.50 1
(GH271422) PvM13_E02 Pistacia male and female panicles Pista... 48 0.50 1
(GE782658) EST_ssal_rgf_837397 ssalrgf mixed_tissue full-len... 48 0.50 1
(GE777941) EST_ssal_rgf_846447 ssalrgf mixed_tissue full-len... 48 0.50 1
(FL681319) CIRQL009C01 CiRQ Cichorium intybus cDNA 3', mRNA ... 48 0.50 1
(FE939995) AHAI-aaa72d01.b2 Pristionchus_pacificus_AHAI1_EST... 48 0.50 1
(FD702789) CAAA11586.fwd CAAA Petromyzon marinus Petromyzon ... 48 0.50 1
(FD702788) CAAA11586.rev CAAA Petromyzon marinus Petromyzon ... 48 0.50 1
(FD258846) CBZF8233.g1 CBZF: Normalized blue catfish cDNA li... 48 0.50 1
(FD258845) CBZF8233.b1 CBZF: Normalized blue catfish cDNA li... 48 0.50 1
(FD252183) CBZF4307.g1 CBZF: Normalized blue catfish cDNA li... 48 0.50 1
(FD252182) CBZF4307.b1 CBZF: Normalized blue catfish cDNA li... 48 0.50 1
(FD241544) CBZF29080.b1 CBZF: Normalized blue catfish cDNA l... 48 0.50 1
(FD229210) CBZF21193.g1 CBZF: Normalized blue catfish cDNA l... 48 0.50 1
(FD220607) CBZF15974.b1 CBZF: Normalized blue catfish cDNA l... 48 0.50 1
(EX853804) CBNF10330.rev CBNF Phycomyces blakesleeanus NRRL1... 48 0.50 1
(EV434572) Gcometa_CL38_1 Gymnophrys cometa cDNA library Gym... 48 0.50 1
(EV279368) GLNAH05TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 0.50 1
(EU024898) Uncultured bacterium clone tgutfos2_Contig110 gen... 48 0.50 1
(AC124400) Mus musculus BAC clone RP24-357O21 from chromosom... 44 0.52 4
(DY264295) IC0AAA14AF06RM1 CitNFL Citrus clementina cDNA 5',... 42 0.55 2
(AC210043) Zea mays chromosome 6 clone ZMMBBb-140O8; ZMMBBb0... 44 0.56 4
(BX629347) Zebrafish DNA sequence from clone DKEY-103K21 in ... 38 0.58 5
(AC179092) Strongylocentrotus purpuratus clone R3-4011A6, WO... 38 0.64 6
(AP007857) Lotus japonicus genomic DNA, chromosome 3, clone:... 38 0.75 4
(AC196986) Zea mays chromosome unknown clone ZMMBBb-236E15; ... 44 0.75 2
(AC181897) Strongylocentrotus purpuratus clone R3-1016C08, W... 44 0.76 5
(AC197520) Zea mays chromosome 9 clone ZMMBBb-461K18; ZMMBBb... 44 0.76 2
(AB169043) Macaca fascicularis testis cDNA, clone: QtsA-1684... 46 0.79 2
(AR549935) Sequence 5066 from patent US 6747137. 44 0.83 2
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 34 0.84 7
(U25841) Saccharomyces cerevisiae chromosome XVI cosmid 9677. 44 0.84 2
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 36 0.89 2
(AC177109) Strongylocentrotus purpuratus clone R3-4014B6, WO... 40 0.90 4
(AC178423) Strongylocentrotus purpuratus clone R3-3113J1, WO... 46 0.91 4
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 36 0.92 8
(AM501377) Medicago truncatula var. truncatula partial NIN g... 46 0.94 2
(CR856021) Paramecium tetraurelia macronuclear, dynamin-rela... 46 0.94 2
(AC187908) Zea mays chromosome 7 clone CH201-159F19; ZMMBBc0... 44 0.97 2
(AM501360) Medicago truncatula var. truncatula partial NIN g... 46 0.98 2
(AC180802) Strongylocentrotus purpuratus clone R3-3071G22, W... 42 0.98 6
(CU372900) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 1.0 2
(AC179836) Strongylocentrotus purpuratus clone R3-1012D6, WO... 34 1.0 2
(DW404737) ES-N-S01-0052-W Penaeus monodon Eyestalk cDNA lib... 40 1.0 2
(EH420424) OL4444F Brassica oleracea var. alboglabra leaf cD... 44 1.0 2
(AC177955) Strongylocentrotus purpuratus clone R3-3049C24, W... 34 1.0 2
(AC139457) Homo sapiens chromosome 5 clone RP11-1042H2, WORK... 42 1.1 3
(EJ338542) 1092963498076 Global-Ocean-Sampling_GS-28-01-01-1... 38 1.1 2
(AC139800) Homo sapiens chromosome 5 clone RP11-1325B19, WOR... 42 1.1 3
(CZ872839) OC__Ba0271P19.r OC__Ba Oryza coarctata genomic cl... 44 1.1 2
(AM501354) Medicago truncatula var. truncatula partial NIN g... 46 1.1 2
(AM501367) Medicago truncatula var. truncatula partial NIN g... 46 1.1 2
(AM501356) Medicago truncatula var. truncatula partial NIN g... 46 1.1 2
(AM501379) Medicago truncatula var. truncatula partial NIN g... 46 1.1 2
(AM501373) Medicago truncatula var. truncatula partial NIN g... 46 1.1 2
(FK688859) CCBU3097.g1 CCBU Cochliobolus heterostrophus, Che... 42 1.2 2
(AM501369) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AM501374) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AM774002) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AR554685) Sequence 9816 from patent US 6747137. 38 1.2 3
(AM501365) Medicago truncatula var. longiaculeata partial NI... 46 1.2 2
(AM774003) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AM501368) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AC203048) Zea mays chromosome 5 clone CH201-133H13; ZMMBBc0... 44 1.2 4
(AM501361) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AM501381) Medicago truncatula var. truncatula partial NIN g... 46 1.2 2
(AC156978) Bos taurus clone CH240-57A5, WORKING DRAFT SEQUEN... 42 1.2 5
(FK688858) CCBU3097.b1 CCBU Cochliobolus heterostrophus, Che... 42 1.2 2
(DE238926) Trifolium pratense DNA, clone:RCG37564. 40 1.3 2
(DE236798) Trifolium pratense DNA, clone:RCG32472. 40 1.3 2
(AC178163) Strongylocentrotus purpuratus clone R3-3081I9, WO... 44 1.3 6
(AC186233) Zea mays chromosome 1 clone CH201-151B16; ZMMBBc0... 44 1.3 4
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 32 1.3 9
(CT093972) Sus scrofa genomic clone PigE-168D24, genomic sur... 40 1.3 2
(EY182062) CBTI8452.g1_G01.ab1:P Triphysaria pusilla root ti... 44 1.3 2
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 34 1.4 8
(CN505905) AGENCOURT_22823846 NIH_ZGC_9 Danio rerio cDNA clo... 34 1.4 2
(DH507015) Monosiga ovata DNA, fosmid clone: MOF-079C10, gen... 34 1.4 2
(AC177094) Strongylocentrotus purpuratus clone R3-4012H5, WO... 44 1.4 5
(FD223431) CBZF17781.g1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2
(AP009906) Lotus japonicus genomic DNA, clone: LjT04K19, TM2... 44 1.4 4
(FD003489) CBNH2678.b1 CBNH: Normalized blue catfish cDNA li... 36 1.4 2
(FD243777) CBZF30939.b1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2
(DH493069) Monosiga ovata DNA, fosmid clone: MOF-055B24, gen... 34 1.4 2
(FD223760) CBZF1799.g1 CBZF: Normalized blue catfish cDNA li... 36 1.4 2
(FD243778) CBZF30939.g1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2
(FD223759) CBZF1799.b1 CBZF: Normalized blue catfish cDNA li... 36 1.4 2
(FD235812) CBZF25106.b1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2
(FD235813) CBZF25106.g1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2
(FD003490) CBNH2678.g1 CBNH: Normalized blue catfish cDNA li... 36 1.4 2
(FE874770) XYM15331.fwd XYM Monosiga brevicollis rapidly gro... 34 1.4 2
(FD247750) CBZF33742.g1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2
(FD247749) CBZF33742.b1 CBZF: Normalized blue catfish cDNA l... 36 1.4 2

>(AU075950) Dictyostelium discoideum slug cDNA, clone SSA190.
Length = 712

Score = 1134 bits (572), Expect(3) = 0.0
Identities = 572/572 (100%)
Strand = Plus / Plus


Query: 34 ttcacaatgttcatcaagtcatagtttattagataccaatattggtggtatccaatgtaa 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcacaatgttcatcaagtcatagtttattagataccaatattggtggtatccaatgtaa 60


Query: 94 atactcaaaatttggtttcatttacaaatgaaacttcaaactctggttcaactattataa 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atactcaaaatttggtttcatttacaaatgaaacttcaaactctggttcaactattataa 120


Query: 154 agcctgttgcacttaaatctagtagcagaagcgtatttaatagtagtaataatcaacaat 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcctgttgcacttaaatctagtagcagaagcgtatttaatagtagtaataatcaacaat 180


Query: 214 atcttttctcttcttcgactttatcttcatcttcttcgactaaaactaataataattcaa 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcttttctcttcttcgactttatcttcatcttcttcgactaaaactaataataattcaa 240


Query: 274 caacaaccaccactaccaccaccgccaaaacatcatcaacttcaacaaatgattactcat 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacaaccaccactaccaccaccgccaaaacatcatcaacttcaacaaatgattactcat 300


Query: 334 ctattaaaggtaaaagtttaatagatgatgatgcatcctgctcgatttcttcatttaatg 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctattaaaggtaaaagtttaatagatgatgatgcatcctgctcgatttcttcatttaatg 360


Query: 394 caattgaacaacaagttctaattccaacggtcctatcatcatcctcttcatctcatgtta 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caattgaacaacaagttctaattccaacggtcctatcatcatcctcttcatctcatgtta 420


Query: 454 tgaaaagaagtaatggtagttcaaatggtggtaactccaccatacaatcaccatcttgta 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaaaagaagtaatggtagttcaaatggtggtaactccaccatacaatcaccatcttgta 480


Query: 514 atcaaatatcgatcaataagaataacttggtagatatcgatgatgaggatgaggatgatg 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atcaaatatcgatcaataagaataacttggtagatatcgatgatgaggatgaggatgatg 540


Query: 574 aggacgatatcaatggccattgggaaaaatta 605
||||||||||||||||||||||||||||||||
Sbjct: 541 aggacgatatcaatggccattgggaaaaatta 572

Score = 73.8 bits (37), Expect(3) = 0.0
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 606 acaataccatctaatatgtgtagagatcaaatctcaa 642
|||||||||||||||||||||||||||||||||||||
Sbjct: 572 acaataccatctaatatgtgtagagatcaaatctcaa 608

Score = 73.8 bits (37), Expect(3) = 0.0
Identities = 37/37 (100%)
Strand = Plus / Plus


Query: 664 gaatcgacaaaagtaatttgctaatatactttatttt 700
|||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaatcgacaaaagtaatttgctaatatactttatttt 662

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 958,344,340
Number of extensions: 61633334
Number of successful extensions: 5840236
Number of sequences better than 10.0: 3398
Length of query: 766
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 742
Effective length of database: 99,340,224,878
Effective search space: 73710446859476
Effective search space used: 73710446859476
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.29
Homology vs Protein
Query= Contig-U04327-1 (Contig-U04327-1Q) /CSM_Contig/Contig-U04327-1Q.Seq.d
(766 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q86I32) RecName: Full=Uncharacterized protein DDB_G0275275; &A... 192 1e-47

>(Q86I32) RecName: Full=Uncharacterized protein DDB_G0275275;
&AC116305_66(AC116305|pid:none)
Length = 542

Score = 192 bits (487), Expect(2) = 1e-47
Identities = 112/192 (58%), Positives = 114/192 (59%)
Frame = +3

Query: 87 NVNTQNLVSFTNETSNSGSTIIKPVALKXXXXXXXXXXXXQQYLFXXXXXXXXXXXXXXX 266
NVNTQNLVSFTNETSNSGSTIIKPVALK QQYLF
Sbjct: 345 NVNTQNLVSFTNETSNSGSTIIKPVALKSSSRSVFNSSNNQQYLFSSSTLSSSSSTKTNN 404

Query: 267 XXXXXXXXXXXXXXXXXXXDYSSIKGKSLIDDDASCSISSFNAIEQQVLIPTVLXXXXXX 446
DYSSIKGKSLIDDDASCSISSFNAIEQQVLIPTVL
Sbjct: 405 NSTTTTTTTTAKTSSTSTNDYSSIKGKSLIDDDASCSISSFNAIEQQVLIPTVLSSSSSS 464

Query: 447 HVMKRXXXXXXXXXXTIQSPSCNQISINKNNLVXXXXXXXXXXXXXNGHWEKLTIPSNMC 626
HVMKR TIQSPSCNQISINKNNLV NGHWEK+TIPSNMC
Sbjct: 465 HVMKRSNGSSNGGNSTIQSPSCNQISINKNNLVDIDDEDEDDEDDINGHWEKITIPSNMC 524

Query: 627 RDQISN*EINFD 662
RDQIS + NFD
Sbjct: 525 RDQISI-KNNFD 535

Score = 21.9 bits (45), Expect(2) = 1e-47
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +2

Query: 59 LLDTNIGGI 85
LLDTNIGGI
Sbjct: 336 LLDTNIGGI 344

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 763,510,715
Number of extensions: 9463154
Number of successful extensions: 18408
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18407
Number of HSP's successfully gapped: 2
Length of query: 255
Length of database: 1,061,185,681
Length adjustment: 126
Effective length of query: 129
Effective length of database: 649,361,233
Effective search space: 83767599057
Effective search space used: 83767599057
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.86 gvh: 0.49 alm: 0.43 top: 0.47 tms: 0.00 mit: 0.30 mip: 0.07
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U04327-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 2
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0