Contig-U04314-1
Contig ID Contig-U04314-1
Contig update 2002. 9.13
Contig sequence
>Contig-U04314-1 (Contig-U04314-1Q) /CSM_Contig/Contig-U04314-1Q.Seq.d
AAAGAGATAAAATAAATTACTATAAATTAGTTGTGATATTAATTTTATTG
TTAATTTGGAAAATTTAATAAAAACAAATAAATAATAAATACCCCCACAT
TTTTAAAATTAAAATAATTAATCGATTAAAAAATGAAAAGTATTAAAGTT
TGTGTTGTTGGCGAAGGTGGAAATTGGTAAAAACATCAATGTTATTCAGT
TATACATCAAATTCAATTTCAAATGAATATCAACCAACAGTATTTGATAA
CTATTCAACTTTATTAATGCATAATAAAAACCCATATAATTTATCATTGT
GGGATACTGCAGGTCAAGAAGAGTTTAGTAAATTAAGGAAGGTTAAGTTA
TCCTCAAACTGATGTATTTTTATTATGTTTTTCACTTATAAATCCATCAT
CATTTTCAAATATTTTAGATTCATGGGTACAGGAATTAAATGAAAATTGC
CCAAATACCCCATTGGTTTTGGTTGGTACTCAAATGGATTTAAAATCAAA
TTCAGTTATACTGGATAGACTATGTGAAAAAAAACAATTACCAATTTCAA
CTCAACAAGGTATTGAACTTTCAAAGAAAATTAATGCATTTGATTTTGTG
GAATGTAGTGCACTAACACAAAAGAATTTACATTTAGTATTTGAAAAAGC
AATTGACGCTTGTGAAGCTCATCAAAAATGTCAATCAAAAGAAAAAAAGA
AAAATAATAAAAAATTTAAAAAAAATTGTATAATAATGTTAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 830
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3731296
End point 3730466
Strand (PLUS/MINUS) MINUS
Number of clones 11
Number of EST 11
Link to clone list U04314
List of clone(s)

est1=SSA135F,1,535
est2=SSI821F,9,635
est3=SSJ554F,9,646
est4=SSF651Z,113,749
est5=SSJ369Z,114,753
est6=SSK569Z,135,763
est7=SSE378Z,190,747
est8=SSD534Z,249,747
est9=SSM838Z,343,693
est10=SSE130E,363,831
est11=SSI844Z,579,763
Translated Amino Acid sequence
keik*itin*l*y*fyc*fgkfnknk*iintptflklk*lid*kmksikvcvvgeggnw*
khqcysvihqiqfqmninqqylitiqly*ciikthiiyhcgilqvkkslvn*GRLSYPQT
DVFLLCFSLINPSSFSNILDSWVQELNENCPNTPLVLVGTQMDLKSNSVILDRLCEKKQL
PISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAIDACEAHQKCQSKEKKKNNKKFK
KNCIIMLKKKKKKKKKKKKKKKKKKKKKKKKKKKKK


Translated Amino Acid sequence (All Frames)
Frame A:
keik*itin*l*y*fyc*fgkfnknk*iintptflklk*lid*kmksikvcvvgeggnw*
khqcysvihqiqfqmninqqylitiqly*ciikthiiyhcgilqvkkslvn*GRLSYPQT
DVFLLCFSLINPSSFSNILDSWVQELNENCPNTPLVLVGTQMDLKSNSVILDRLCEKKQL
PISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAIDACEAHQKCQSKEKKKNNKKFK
KNCIIMLKKKKKKKKKKKKKKKKKKKKKKKKKKKKK


Frame B:
kr*nkll*iscdinfivnlenliktnk**ipphf*n*nn*sikk*kvlkfvllakveigk
ninviqlyikfnfk*istnsi**lfnfina**kpi*fiivgycrsrrv**ikeg*vilkl
myfyyvfhl*ihhhfqif*ihgyrn*mkiaqiphwfwlvlkwi*nqiqlywidyvkknny
qfqlnkvlnfqrklmhlilwnvvh*hkriyi*ylkkqltlvkliknvnqkkkrkiiknlk
kiv**c*kkkkkkkkkkkkkkkkkkkkkkkkkkkkk


Frame C:
rdkinyyklvvilillliwki**kqinnkyphifkikiinrlkneky*slccwrrwklvk
tsmlfsytsnsisneyqptvfdnystllmhnknpynlslwdtagqeefsklrkvklssn*
cifimfftyksiiifkyfrfmgtgik*klpkypigfgwysngfkikfsytg*tm*kktit
nfnstry*tfken*ci*fcgm*ctntkeftfsi*ksn*rl*ssskmsikrkkek**ki*k
klynnvkkkkkkkkkkkkkkkkkkkkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U04314-1 (Contig-U04314-1Q)
/CSM_Contig/Contig-U04314-1Q.Seq.d
(830 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04314-1 (Contig-U04314-1Q) /CSM_Contig/Conti... 995 0.0
Contig-U07963-1 (Contig-U07963-1Q) /CSM_Contig/Conti... 50 4e-06
Contig-U14031-1 (Contig-U14031-1Q) /CSM_Contig/Conti... 46 6e-05
Contig-U12705-1 (Contig-U12705-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U09860-1 (Contig-U09860-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U05359-1 (Contig-U05359-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U02685-1 (Contig-U02685-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U14470-1 (Contig-U14470-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U11767-1 (Contig-U11767-1Q) /CSM_Contig/Conti... 38 0.015
Contig-U11421-1 (Contig-U11421-1Q) /CSM_Contig/Conti... 38 0.015

>Contig-U04314-1 (Contig-U04314-1Q) /CSM_Contig/Contig-U04314-1Q.Seq.d
Length = 830

Score = 995 bits (502), Expect = 0.0
Identities = 518/526 (98%)
Strand = Plus / Plus


Query: 148 gtttgtgttgttggcgaaggtggaaattggtaaaaacatcaatgttattcagttatacat 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gtttgtgttgttggcgaaggtggaaattggtaaaaacatcaatgttattcagttatacat 207


Query: 208 caaattcaatttcaaatgaatatcaaccaacagtatttgataactattcaactttattaa 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 caaattcaatttcaaatgaatatcaaccaacagtatttgataactattcaactttattaa 267


Query: 268 tgcataataaaaacccatataatttatcattgtgggatactgcaggtcaagaagagttta 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgcataataaaaacccatataatttatcattgtgggatactgcaggtcaagaagagttta 327


Query: 328 gtaaattaaggaaggttaagttatcctcaaactgatgtatttttattatgtttttcactt 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtaaattaaggaaggttaagttatcctcaaactgatgtatttttattatgtttttcactt 387


Query: 388 ataaatccatcatcattttcaaatattttagattcatgggtacaggaattaaatgaaaat 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ataaatccatcatcattttcaaatattttagattcatgggtacaggaattaaatgaaaat 447


Query: 448 tgcccaaataccccattggttttggttggtactcaaatggatttaaaatcaaattcagtt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tgcccaaataccccattggttttggttggtactcaaatggatttaaaatcaaattcagtt 507


Query: 508 atactggatagactatgtgnnnnnnnncaattaccaatttcaactcaacaaggtattgaa 567
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 508 atactggatagactatgtgaaaaaaaacaattaccaatttcaactcaacaaggtattgaa 567


Query: 568 ctttcaaagaaaattaatgcatttgattttgtggaatgtagtgcactaacacaaaagaat 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctttcaaagaaaattaatgcatttgattttgtggaatgtagtgcactaacacaaaagaat 627


Query: 628 ttacatttagtatttgaaaaagcaattgacgcttgtgaagctcatc 673
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ttacatttagtatttgaaaaagcaattgacgcttgtgaagctcatc 673


Score = 65.9 bits (33), Expect = 7e-11
Identities = 33/33 (100%)
Strand = Plus / Plus


Query: 1 aaagagataaaataaattactataaattagttg 33
|||||||||||||||||||||||||||||||||
Sbjct: 1 aaagagataaaataaattactataaattagttg 33


>Contig-U07963-1 (Contig-U07963-1Q) /CSM_Contig/Contig-U07963-1Q.Seq.d
Length = 1057

Score = 50.1 bits (25), Expect = 4e-06
Identities = 37/41 (90%)
Strand = Plus / Minus


Query: 349 tatcctcaaactgatgtatttttattatgtttttcacttat 389
||||| |||||||||||||||||| | ||||||||| ||||
Sbjct: 379 tatccacaaactgatgtatttttaatttgtttttcaattat 339


Score = 50.1 bits (25), Expect = 4e-06
Identities = 25/25 (100%)
Strand = Plus / Minus


Query: 300 tgggatactgcaggtcaagaagagt 324
|||||||||||||||||||||||||
Sbjct: 427 tgggatactgcaggtcaagaagagt 403


>Contig-U14031-1 (Contig-U14031-1Q) /CSM_Contig/Contig-U14031-1Q.Seq.d
Length = 910

Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 298 tgtgggatactgcaggtcaagaa 320
|||||||||||||||||||||||
Sbjct: 358 tgtgggatactgcaggtcaagaa 380


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,636
Number of Sequences: 6905
Number of extensions: 11636
Number of successful extensions: 1416
Number of sequences better than 10.0: 167
length of query: 830
length of database: 5,674,871
effective HSP length: 16
effective length of query: 814
effective length of database: 5,564,391
effective search space: 4529414274
effective search space used: 4529414274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.15
Homology vs DNA
Query= Contig-U04314-1 (Contig-U04314-1Q) /CSM_Contig/Contig-U04314-1Q.Seq.d
(830 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C90973) Dictyostelium discoideum slug cDNA, clone SSJ369. 751 0.0 2
(AF310893) Dictyostelium discoideum RacG (racG) gene, comple... 327 0.0 5
(C92890) Dictyostelium discoideum slug cDNA, clone SSF651. 327 0.0 4
(C94231) Dictyostelium discoideum slug cDNA, clone SSK569. 327 0.0 4
(AU037859) Dictyostelium discoideum slug cDNA, clone SSE378. 327 0.0 3
(AU037365) Dictyostelium discoideum slug cDNA, clone SSD534. 327 0.0 3
(C24636) Dictyostelium discoideum slug cDNA, clone SL-X035. 297 0.0 5
(C93218) Dictyostelium discoideum slug cDNA, clone SSM838. 317 e-158 2
(AU072298) Dictyostelium discoideum slug cDNA, clone SSE130. 278 e-104 2
(AU074118) Dictyostelium discoideum slug cDNA, clone SSJ554. 133 3e-44 3
(AU073946) Dictyostelium discoideum slug cDNA, clone SSI821. 133 3e-44 3
(C90612) Dictyostelium discoideum slug cDNA, clone SSI844. 123 1e-23 1
(BI507682) BB170028A20B09.5 Bee Brain Normalized/Subtracted ... 40 2e-12 5
(BI506698) BB170028B20G08.5 Bee Brain Normalized/Subtracted ... 40 2e-12 5
(BI505421) BB170023B10A05.5 Bee Brain Normalized/Subtracted ... 40 3e-12 5
(BI507592) BB170024A20B02.5 Bee Brain Normalized/Subtracted ... 40 3e-12 5
(AU038503) Dictyostelium discoideum slug cDNA, clone SSH801. 52 3e-12 3
(C94218) Dictyostelium discoideum slug cDNA, clone SSK555. 50 3e-11 3
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 50 5e-11 2
(AF310892) Dictyostelium discoideum citrate synthase (gltA) ... 50 5e-11 2
(FC842586) CBHN2084.fwd CBHN Metridium senile tentacle Metri... 46 1e-09 3
(FC843820) CBHN2763.fwd CBHN Metridium senile tentacle Metri... 46 1e-09 3
(BJ342624) Dictyostelium discoideum cDNA clone:dda14i24, 3' ... 40 1e-09 3
(CS026769) Sequence 321 from Patent WO2005014828. 40 1e-09 3
(FC847009) CBHN4529.fwd CBHN Metridium senile tentacle Metri... 46 1e-09 3
(FC854206) CBHN8348.fwd CBHN Metridium senile tentacle Metri... 46 1e-09 3
(AU265411) Dictyostelium discoideum vegetative cDNA clone:VS... 40 1e-09 3
(BJ325504) Dictyostelium discoideum cDNA clone:dda14i24, 5' ... 40 1e-09 3
(L11594) Slime mold RacD protein mRNA, complete cds. 40 1e-09 3
(AU265410) Dictyostelium discoideum vegetative cDNA clone:VS... 40 1e-09 3
(FC843437) CBHN2553.fwd CBHN Metridium senile tentacle Metri... 46 1e-09 3
(CN499806) Dl_sw_10C12_TEXF1 Diplosoma listerianum mixed adu... 44 2e-08 3
(AF037042) Dictyostelium discoideum ras-related GTPase RacF1... 46 2e-07 2
(EX650706) 256740620 Pea aphid whole body normalized full le... 46 2e-07 2
(EC193650) SSE00002986 Streblomastix strix Non-normalized St... 38 2e-07 4
(CX094300) EHAFX23TR E. histolytica Normalized cDNA library ... 40 2e-07 4
(DY446983) HSAA-aaa101g09.g2 UCI-11 Hydra vulgaris cDNA 5' s... 40 2e-07 4
(AM648124) Entamoeba moshkovskii FIC GSS, clone mosh055f04.q1k. 40 6e-07 4
(L11590) Slime mold Rac1C protein mRNA, 3' end. 44 7e-07 3
(CS026777) Sequence 329 from Patent WO2005014828. 44 8e-07 3
(AF153328) Dictyostelium discoideum Rac1C (rac1C) mRNA, comp... 44 8e-07 3
(AU076386) Dictyostelium discoideum slug cDNA, clone SSA690. 44 9e-07 3
(DW058204) CLLY10825.b2_A19.ab1 CLL(XYZ) lettuce saligna Lac... 40 2e-06 4
(CT850607) Oryza sativa Indica Group EST sequence:OSIGCRN106... 42 2e-06 3
(AM664933) Entamoeba moshkovskii FIC GSS, clone mosh117a04.q1k. 44 2e-06 3
(AM660851) Entamoeba moshkovskii FIC GSS, clone mosh103f04.p1k. 44 6e-06 3
(AF310885) Dictyostelium discoideum Rac1C (rac1C) gene, comp... 44 9e-06 2
(EV821287) BGBV-aae53h10.b1 Snail_EST_pSMART Biomphalaria gl... 48 1e-05 2
(CN013305) camcoP008C12 camco Biomphalaria glabrata cDNA clo... 48 1e-05 2
(EE282787) SAAH-aab12h03.g1 Agen 0058 Schmidtea mediterranea... 46 2e-05 2
(AY067061) Schmidtea mediterranea clone H.54.1h unknown mRNA... 46 2e-05 2
(EE674159) SAAH-aab42d05.g1 Agen 0058 Schmidtea mediterranea... 46 2e-05 2
(AF310886) Dictyostelium discoideum RacA (racA) gene, comple... 48 2e-05 4
(DN290013) PL030002B10F08 cDNA from sexually mature hermapho... 46 2e-05 2
(EE136758) SiJWC06AAS Lausanne fire ant library Solenopsis i... 54 2e-05 2
(DN242406) ACAD-aab29o01.g1 Hydra_EST_UCI-8 Hydra magnipapil... 40 3e-05 3
(EE282284) SAAH-aab02h02.g1 Agen 0058 Schmidtea mediterranea... 46 3e-05 2
(EE283851) SAAH-aab36e12.g1 Agen 0058 Schmidtea mediterranea... 46 3e-05 2
(DN292065) PL030009B10D12 cDNA from sexually mature hermapho... 46 3e-05 2
(EC615065) SAAH-aaa49h06.g1 Agen 0058 Schmidtea mediterranea... 46 3e-05 2
(EG343301) SAAH-aac62f03.g1 Agen 0058 Schmidtea mediterranea... 46 3e-05 2
(EE673058) SAAH-aab81c06.g1 Agen 0058 Schmidtea mediterranea... 46 3e-05 2
(EE668727) SAAH-aac29c07.g1 Agen 0058 Schmidtea mediterranea... 46 3e-05 2
(EG347802) SAAH-aab81c06.b1 Agen 0058 Schmidtea mediterranea... 46 4e-05 2
(EE666877) SAAH-aab65b04.g1 Agen 0058 Schmidtea mediterranea... 46 4e-05 2
(CN554923) tae30g01.y1 Hydra EST Darmstadt I Hydra magnipapi... 40 4e-05 3
(EC615503) SAAH-aaa66a04.g1 Agen 0058 Schmidtea mediterranea... 46 4e-05 2
(CN586319) USDA-FP_129391 Acyrthosiphon pisum, Pea Aphid Acy... 46 4e-05 2
(CN753840) ID0AAA11BC05RM1 ApMS Acyrthosiphon pisum cDNA clo... 46 4e-05 2
(FF313686) 279391185 Pea aphid whole body normalized full le... 46 4e-05 2
(FF333903) 280455554 Pea aphid whole body normalized full le... 46 4e-05 2
(CN759435) ID0AAA25CB11RM1 ApMS Acyrthosiphon pisum cDNA clo... 46 4e-05 2
(FF294630) 279302370 Pea aphid whole body normalized full le... 46 4e-05 2
(EX624985) 255429917 Pea aphid whole body normalized full le... 46 4e-05 2
(EX649766) 256736907 Pea aphid whole body normalized full le... 46 4e-05 2
(FF302312) 279347817 Pea aphid whole body normalized full le... 46 4e-05 2
(EX607848) 255361722 Pea aphid whole body normalized full le... 46 4e-05 2
(FF322183) 280415682 Pea aphid whole body normalized full le... 46 4e-05 2
(EX611305) 255375679 Pea aphid whole body normalized full le... 46 4e-05 2
(FF292608) 279283580 Pea aphid whole body normalized full le... 46 4e-05 2
(EX636427) 256610036 Pea aphid whole body normalized full le... 46 4e-05 2
(EX608738) 255365144 Pea aphid whole body normalized full le... 46 4e-05 2
(FF337638) 280467984 Pea aphid whole body normalized full le... 46 4e-05 2
(FF315945) 280376897 Pea aphid whole body normalized full le... 46 4e-05 2
(FF337465) 280466872 Pea aphid whole body normalized full le... 46 4e-05 2
(EX610794) 255372209 Pea aphid whole body normalized full le... 46 4e-05 2
(FF331758) 280448498 Pea aphid whole body normalized full le... 46 4e-05 2
(FF326349) 280429158 Pea aphid whole body normalized full le... 46 4e-05 2
(EX640707) 256634291 Pea aphid whole body normalized full le... 46 4e-05 2
(DV741030) ID0AFF3AF11CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 46 4e-05 2
(AU074462) Dictyostelium discoideum slug cDNA, clone SSK792. 40 4e-05 2
(DN313763) PL06016B1B03 cDNA from juvenile hermaphodites Sch... 46 4e-05 2
(DR437548) ACAB-aaa68c01.g1 Hydra UCI6- barcoded EST's Hydra... 40 4e-05 3
(CX634593) taj52d02.y3 Hydra EST UCI 5 Hydra magnipapillata ... 40 4e-05 3
(DN300697) PL04020A1F10 cDNA from sexually mature hermaphodi... 46 4e-05 2
(CX634802) taj51f05.y2 Hydra EST UCI 5 Hydra magnipapillata ... 40 4e-05 3
(DR395843) USDA-FP_155778 Adult Alate Aphis gossypii (WHAGA)... 38 5e-05 4
(BP518521) Hydra magnipapillata cDNA, clone:hmp_15451. 40 5e-05 3
(CV660069) tak22c11.y1 Hydra EST UCI 6 Hydra magnipapillata ... 40 6e-05 3
(DN813735) ACAC-aab57c03.g1 Hydra EST UCI 7 Hydra magnipapil... 40 6e-05 3
(DT617845) ACAH-aaa31h10.g1 Hydra_EST_UCI-10 Hydra magnipapi... 40 6e-05 3
(DT610964) ACAG-aab09g08.g1 Hydra_EST_UCI-9 Hydra magnipapil... 40 6e-05 3
(CX833292) ACAC-aaa56d09.g1 Hydra EST UCI 7 Hydra magnipapil... 40 7e-05 3
(EC191589) SSE00001788 Streblomastix strix Non-normalized St... 38 8e-05 3
(AF310884) Dictyostelium discoideum Rac1B (rac1B) gene, comp... 40 1e-04 2
(AU051897) Dictyostelium discoideum slug cDNA, clone SSC344. 40 1e-04 2
(CS026775) Sequence 327 from Patent WO2005014828. 40 1e-04 2
(L11589) Slime mold Rac1B protein mRNA, complete cds. 40 1e-04 2
(EE570892) B07_B07fv2i14_pDNRf_530793 Myzus persicae, line F... 46 1e-04 2
(L11591) Slime mold RacA protein mRNA, partial cds. 46 1e-04 2
(C92353) Dictyostelium discoideum slug cDNA, clone SSE625. 40 1e-04 2
(C92832) Dictyostelium discoideum slug cDNA, clone SSF454. 40 1e-04 2
(BJ400070) Dictyostelium discoideum cDNA clone:dds8p13, 3' e... 40 1e-04 2
(AU272488) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 46 1e-04 2
(AU272487) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 46 1e-04 2
(AU269248) Dictyostelium discoideum vegetative cDNA clone:VS... 40 3e-04 3
(C91990) Dictyostelium discoideum slug cDNA, clone SSC689. 40 4e-04 3
(CK989922) BgHC-4.43 BgHC Biomphalaria glabrata cDNA 5', mRN... 36 5e-04 3
(ES599374) BPE00000304 Buddenbrockia plumatellae SMART cDNA ... 44 5e-04 2
(ES599221) BPE00000644 Buddenbrockia plumatellae SMART cDNA ... 44 5e-04 2
(EE000561) ROE00013776 Rhizopus oryzae Company Rhizopus oryz... 38 5e-04 2
(AU075957) Dictyostelium discoideum slug cDNA, clone SSC364. 40 5e-04 3
(AU263234) Dictyostelium discoideum vegetative cDNA clone:VS... 40 6e-04 3
(EG016416) EST01167_0906 Sporophyte cDNA Library Porphyra ha... 58 6e-04 1
(C92683) Dictyostelium discoideum slug cDNA, clone SSF833. 40 6e-04 3
(BJ370850) Dictyostelium discoideum cDNA clone:ddc55m17, 5' ... 40 6e-04 3
(AU269249) Dictyostelium discoideum vegetative cDNA clone:VS... 40 6e-04 3
(BJ385652) Dictyostelium discoideum cDNA clone:ddc55m17, 3' ... 40 7e-04 3
(AU038908) Dictyostelium discoideum slug cDNA, clone SSM126. 40 7e-04 3
(C91464) Dictyostelium discoideum slug cDNA, clone SSK312. 40 7e-04 3
(CS026765) Sequence 317 from Patent WO2005014828. 40 7e-04 3
(L11592) Slime mold RacB protein mRNA, complete cds. 40 7e-04 3
(C91964) Dictyostelium discoideum slug cDNA, clone SSC592. 40 8e-04 3
(BI507796) BB170001A10H03.5 Bee Brain Normalized/Subtracted ... 38 0.001 3
(BW635535) Dugesia ryukyuensis mRNA, clone: Dr_sW_002_K11, 5... 38 0.001 3
(BW636356) Dugesia ryukyuensis mRNA, clone: Dr_sW_005_D11, 5... 38 0.001 3
(BW636249) Dugesia ryukyuensis mRNA, clone: Dr_sW_004_N23, 5... 38 0.001 3
(CK629715) AM0-AA0021-091202-021-B06 AA0021 Apis mellifera c... 40 0.001 3
(CK629714) AM0-AA0021-091202-021-C03 AA0021 Apis mellifera c... 40 0.001 3
(DB730055) Apis mellifera head cDNA, RIKEN full-length enric... 40 0.001 3
(DB753335) Apis mellifera head cDNA, RIKEN full-length enric... 38 0.002 3
(BI515877) BB160020B20A12.5 Bee Brain Normalized Library, BB... 38 0.002 3
(BJ361512) Dictyostelium discoideum cDNA clone:ddc17b15, 5' ... 40 0.002 3
(BJ325760) Dictyostelium discoideum cDNA clone:dda2k03, 5' e... 40 0.002 3
(BJ329533) Dictyostelium discoideum cDNA clone:dda25h12, 5' ... 40 0.002 3
(BJ413527) Dictyostelium discoideum cDNA clone:ddv16h06, 5' ... 40 0.002 3
(BJ389662) Dictyostelium discoideum cDNA clone:dds19i15, 5' ... 40 0.002 3
(DC443521) Gryllus bimaculatus mRNA, clone:GB00364-54_E06, 5... 42 0.002 2
(DQ225184) Lytechinus variegatus Ras homology protein (RhoA)... 40 0.002 2
(AM762539) Oopsacas minuta EST, 5' end sequence, clone IL0AF... 56 0.002 1
(AM656655) Entamoeba moshkovskii FIC GSS, clone mosh043e08.p1k. 38 0.003 3
(AC223693) Bos taurus clone CH240-462C1, WORKING DRAFT SEQUE... 40 0.003 5
(AM662993) Entamoeba moshkovskii FIC GSS, clone mosh130d09.q1k. 38 0.004 3
(BP186993) Dugesia japonica cDNA, clone: 00806_HH, expressed... 40 0.005 2
(BP186973) Dugesia japonica cDNA, clone: 00825_HH, expressed... 40 0.005 2
(FC685363) CAXX18184.fwd CAXX Lottia gigantea from male gona... 42 0.006 2
(FC763847) CBBN14191.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 42 0.006 2
(FC694814) CAXX4622.fwd CAXX Lottia gigantea from male gonad... 42 0.006 2
(CK564426) rswpb0_009381.y1 swp Bombyx mori cDNA, mRNA seque... 34 0.006 3
(FC576445) CAXP12301.fwd CAXP Lottia gigantea from head, foo... 42 0.006 2
(FC747913) CBBI3549.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 42 0.007 2
(FC750946) CBBI5453.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 42 0.007 2
(FC771196) CBBN6300.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 42 0.007 2
(FC685626) CAXX18338.fwd CAXX Lottia gigantea from male gona... 42 0.007 2
(FC685994) CAXX18568.fwd CAXX Lottia gigantea from male gona... 42 0.007 2
(FC761649) CBBN12816.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 42 0.007 2
(EG348104) SAAH-aac82g07.g1 Agen 0058 Schmidtea mediterranea... 40 0.007 2
(EH252965) JGI_ACAC16920.fwd ACAC Phakopsora pachyrhizi TW72... 40 0.008 2
(DC864023) Samia cynthia ricini cDNA, clone: I09A02NGRL0005_... 40 0.008 2
(FL645643) TS55-B3 Reticulitermes flavipes symbiont library ... 38 0.008 2
(FC765101) CBBN1880.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 42 0.008 2
(EC131560) HVE00007960 Hartmannella vermiformis Regular Smal... 38 0.008 2
(ES492709) BIG_AF_525 Brine Shrimp embryos, 15 hours after h... 40 0.008 2
(FC782776) CBGC13922.fwd CBGC Lottia gigantea 15h 18h embryo... 42 0.008 2
(FC580425) CAXP14523.fwd CAXP Lottia gigantea from head, foo... 42 0.008 2
(FC768695) CBBN4587.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 42 0.008 2
(FC643787) CAXU6788.fwd CAXU Lottia gigantea from female gon... 42 0.008 2
(FC691733) CAXX2767.fwd CAXX Lottia gigantea from male gonad... 42 0.008 2
(FC581565) CAXP15161.fwd CAXP Lottia gigantea from head, foo... 42 0.008 2
(EH707659) CCIS7015.b1_N01.ab1 CCI(LMS) chicory Cichorium in... 54 0.009 1
(EH694927) CCIM6818.b1_D02.ab1 CCI(LMS) chicory Cichorium in... 54 0.009 1
(EH689661) CCIM1831.b1_N02.ab1 CCI(LMS) chicory Cichorium in... 54 0.009 1
(EE142601) SiJWH09BCD2 Lausanne fire ant library Solenopsis ... 54 0.009 1
(DY985165) CLSS9995.b1_E03.ab1 CLS(LMS) lettuce sativa Lactu... 54 0.009 1
(DY983754) CLSS6361.b1_A08.ab1 CLS(LMS) lettuce sativa Lactu... 54 0.009 1
(DY979760) CLSS13431.b1_N22.ab1 CLS(LMS) lettuce sativa Lact... 54 0.009 1
(DY978352) CLSS1209.b1_A15.ab1 CLS(LMS) lettuce sativa Lactu... 54 0.009 1
(DY977296) CLSS11064.b1_P06.ab1 CLS(LMS) lettuce sativa Lact... 54 0.009 1
(DY976341) CLSS10066.b1_C21.ab1 CLS(LMS) lettuce sativa Lact... 54 0.009 1
(DY825032) CTOY1662.b1_L07.ab1 CTO(XYZ) dandelion Taraxacum ... 54 0.009 1
(DY809517) CTOX18040.b1_P22.ab1 CTO(XYZ) dandelion Taraxacum... 54 0.009 1
(DY809165) CTOX17621.b1_J14.ab1 CTO(XYZ) dandelion Taraxacum... 54 0.009 1
(DW167989) CLVY6371.b1_E10.ab1 CLV(XYZ) lettuce virosa Lactu... 54 0.009 1
(DW150321) CLVX2158.b1_K12.ab1 CLV(XYZ) lettuce virosa Lactu... 54 0.009 1
(DW148842) CLVX14181.b1_J18.ab1 CLV(XYZ) lettuce virosa Lact... 54 0.009 1
(DW142229) CLSZ1453.b1_J04.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW139305) CLSY700.b1_H08.ab1 CLS(XYZ) lettuce sativa Lactuc... 54 0.009 1
(DW134701) CLSY2201.b1_A24.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW132494) CLSX9154.b1_D10.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW130681) CLSX7343.b1_M11.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW130179) CLSX6884.b1_H18.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW127325) CLSX3890.b1_C13.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW125027) CLSX1511.b1_N18.ab1 CLS(XYZ) lettuce sativa Lactu... 54 0.009 1
(DW124250) CLSX10699.b1_F12.ab1 CLS(XYZ) lettuce sativa Lact... 54 0.009 1
(DW124106) CLSX10552.b1_P21.ab1 CLS(XYZ) lettuce sativa Lact... 54 0.009 1
(DW120049) CLRY8669.b1_I08.ab1 CLR(XYZ) lettuce serriola Lac... 54 0.009 1
(DW116054) CLRY4173.b2_J12.ab1 CLR(XYZ) lettuce serriola Lac... 54 0.009 1
(DW113757) CLRY1857.b1_B10.ab1 CLR(XYZ) lettuce serriola Lac... 54 0.009 1
(DW113112) CLRY1203.b1_E13.ab1 CLR(XYZ) lettuce serriola Lac... 54 0.009 1
(DW105077) CLRX2891.b1_E04.ab1 CLR(XYZ) lettuce serriola Lac... 54 0.009 1
(DW104820) CLRX2630.b1_L10.ab1 CLR(XYZ) lettuce serriola Lac... 54 0.009 1
(DW097966) CLPY8996.b1_H17.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW096845) CLPY7860.b1_H21.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW094753) CLPY5892.b1_H09.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW093527) CLPY4760.b1_P13.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW093241) CLPY4496.b1_O20.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW093045) CLPY4313.b1_A23.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW087189) CLPY10678.b1_L06.ab1 CLP(XYZ) lettuce perennis La... 54 0.009 1
(DW086320) CLPX9796.b1_G02.ab1 CLP(XYZ) lettuce perennis Lac... 54 0.009 1
(DW068585) CLLY8367.b1_N04.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW064916) CLLY4542.b1_L08.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW064022) CLLY3701.b1_I14.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW063653) CLLY3319.b1_M14.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW063298) CLLY2957.b1_I20.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW062911) CLLY2561.b1_A18.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW060797) CLLY13295.b1_M12.ab1 CLL(XYZ) lettuce saligna Lac... 54 0.009 1
(DW059331) CLLY11930.b1_C07.ab1 CLL(XYZ) lettuce saligna Lac... 54 0.009 1
(DW050646) CLLX3431.b1_N18.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW048792) CLLX1538.b1_C01.ab1 CLL(XYZ) lettuce saligna Lact... 54 0.009 1
(DW046134) CLLX12869.b1_I02.ab1 CLL(XYZ) lettuce saligna Lac... 54 0.009 1
(DW045359) CLLX12142.b1_K12.ab1 CLL(XYZ) lettuce saligna Lac... 54 0.009 1
(DR401827) TKN076A03_631176 Taraxacum kok-saghyz root cDNA l... 54 0.009 1
(BQ983057) QGE18B15.yg.ab1 QG_EFGHJ lettuce serriola Lactuca... 54 0.009 1
(CN571295) tag50d04.y1 Hydra EST -Kiel 2 Hydra magnipapillat... 40 0.014 2
(DB750227) Apis mellifera head cDNA, RIKEN full-length enric... 38 0.017 2
(CX080715) EHAA909TF E. histolytica Normalized cDNA library ... 40 0.019 3
(AM637637) Entamoeba dispar GSS, clone dispar46f05.p1k. 36 0.019 3
(BY941623) Bombyx mori cDNA, clone:E_FL_e100_15B03_F_0, 5' e... 32 0.019 3
(CK539251) rswhb0_001822.y1 swh Bombyx mori cDNA, mRNA seque... 32 0.020 3
(BY942182) Bombyx mori cDNA, clone:E_FL_e100_18K21_F_0, 5' e... 32 0.020 3
(DN294541) PL030017A20E10 cDNA from sexually mature hermapho... 48 0.020 2
(CK527871) rswfa0_005249.y1 swf Bombyx mori cDNA, mRNA seque... 32 0.021 3
(DN298360) PL04012B1D01 cDNA from sexually mature hermaphodi... 48 0.023 2
(DN297872) PL04010B2G01 cDNA from sexually mature hermaphodi... 48 0.023 2
(DN307194) PL05013A2D05 cDNA from sexually mature hermaphodi... 48 0.024 2
(DN299634) PL04016B1G01 cDNA from sexually mature hermaphodi... 48 0.024 2
(DN316112) PL06022B2D11 cDNA from juvenile hermaphodites Sch... 48 0.024 2
(DN296472) PL04006A1H10 cDNA from sexually mature hermaphodi... 48 0.024 2
(AF310887) Dictyostelium discoideum RacB (racB) gene, partia... 40 0.026 2
(EA403002) Sequence 32 from patent US 7319024. 40 0.027 2
(DD279457) A novel C. elegans p21-activated kinase (PAK) gen... 40 0.027 2
(CS134619) Sequence 32 from Patent EP1559722. 40 0.027 2
(DN313202) PL06015A1B01 cDNA from juvenile hermaphodites Sch... 48 0.028 2
(FE267270) CAZO6010.fwd CAZO Naegleria gruberi Flagellate St... 40 0.028 2
(FE267269) CAZO6010.rev CAZO Naegleria gruberi Flagellate St... 40 0.028 2
(FE264097) CAZO3657.fwd CAZO Naegleria gruberi Flagellate St... 40 0.028 2
(FE264096) CAZO3657.rev CAZO Naegleria gruberi Flagellate St... 40 0.028 2
(BJ837294) Misgurnus anguillicaudatus cDNA clone:dj33o18, 3'... 38 0.028 2
(C90920) Dictyostelium discoideum slug cDNA, clone SSJ311. 40 0.028 2
(BJ826014) Misgurnus anguillicaudatus cDNA clone:dj33o18, 5'... 38 0.029 2
(EY556410) CAWT3623.fwd CAWT Capitella sp. I ECS-2004 Primar... 42 0.029 2
(AM759846) Ephydatia muelleri EST, 5' end sequence, clone IL... 38 0.029 2
(CS026577) Sequence 129 from Patent WO2005014828. 40 0.029 2
(EY556409) CAWT3623.rev CAWT Capitella sp. I ECS-2004 Primar... 42 0.029 2
(CB385071) OSTF017H11_2 AD-wrmcDNA Caenorhabditis elegans cD... 40 0.029 2
(CB404083) OSTR017H11_2 AD-wrmcDNA Caenorhabditis elegans cD... 40 0.029 2
(FD580209) RS3FL92TF RS3(RT) Raphanus sativus cDNA 5', mRNA ... 46 0.029 2
(AM759906) Ephydatia muelleri EST, 5' end sequence, clone IL... 38 0.029 2
(AV196428) Caenorhabditis elegans cDNA clone:yk653h8 : 5' en... 40 0.029 2
(C44442) Caenorhabditis elegans cDNA clone yk344c5 : 5' end,... 40 0.029 2
(BI174303) OSTF017H11_1 AD-wrmcDNA Caenorhabditis elegans cD... 40 0.029 2
(CK560357) rswpb0_002649.y1 swp Bombyx mori cDNA, mRNA seque... 32 0.030 3
(BP183050) Bombyx mori cDNA, clone: NRPG1371, 5' end sequence. 32 0.032 3
(EB447848) KT7B.103E20F.060124T7 KT7 Nicotiana tabacum cDNA ... 52 0.035 1
(AM762409) Oopsacas minuta EST, 5' end sequence, clone IL0AF... 52 0.035 1
(CN743954) SAL_US009xe08f1.ab1 SAL_US N.Bentheme Nicotiana b... 52 0.035 1
(CF445974) EST682319 normalized cDNA library of onion Allium... 52 0.035 1
(GH163943) Nas29_D02_2004-11-29_010.ab1 Nasturtium 22 days p... 52 0.035 1
(FG639504) TT-24_P07 Burley21 trichome library Nicotiana tab... 52 0.035 1
(FG638601) TT-03_G02 Burley21 trichome library Nicotiana tab... 52 0.035 1
(BP115242) Bombyx mori cDNA, clone:brP-0662, 5' end sequence. 32 0.037 3
(AU038668) Dictyostelium discoideum slug cDNA, clone SSL324. 46 0.051 2
(CX715387) RTPQ1_33_G06.g1_A032 Roots treated with paraquat ... 38 0.058 2
(AM197009) Paracentrotus lividus EST, clone MPMGp1172P0240Q,... 38 0.081 2
(AM191848) Paracentrotus lividus EST, clone MPMGp1172N1328Q,... 38 0.085 2
(AM202559) Paracentrotus lividus EST, clone MPMGp1172P0254Q,... 38 0.086 2
(AM216685) Paracentrotus lividus EST, clone MPMGp1174J0135Q,... 38 0.087 2
(EC825835) SME00006962 esmbsro2 Sawyeria marylandensis cDNA,... 38 0.088 2
(EG016536) EST01277_0906 Sporophyte cDNA Library Porphyra ha... 34 0.093 3
(CX095923) EHAGK53TR E. histolytica Normalized cDNA library ... 38 0.096 3
(AM225548) Paracentrotus lividus EST, clone MPMGp1174E2157Q,... 38 0.096 2
(AM203173) Paracentrotus lividus EST, clone MPMGp1172J1256Q,... 38 0.096 2
(AM194667) Paracentrotus lividus EST, clone MPMGp1172J1935Q,... 38 0.096 2
(AM199479) Paracentrotus lividus EST, clone MPMGp1172K0347Q,... 38 0.097 2
(AM209837) Paracentrotus lividus EST, clone MPMGp1174G1619Q,... 38 0.097 2
(AM543891) Paracentrotus lividus EST, clone MPMGp1171D16115Q... 38 0.098 2
(CX082875) EHAB325TR E. histolytica Normalized cDNA library ... 38 0.10 3
(CX094929) EHAG629TR E. histolytica Normalized cDNA library ... 38 0.10 3
(AM544910) Paracentrotus lividus EST, clone MPMGp1171P21202Q... 38 0.10 2
(AM219697) Paracentrotus lividus EST, clone MPMGp1174K0342Q,... 38 0.10 2
(CX087785) EHAD593TR E. histolytica Normalized cDNA library ... 38 0.10 3
(AM205512) Paracentrotus lividus EST, clone MPMGp1172P016Q, ... 38 0.10 2
(AM526319) Paracentrotus lividus EST, clone MPMGp1171B1060Q,... 38 0.10 2
(CN063322) Ag2_p41_J15_M13R AG Ambystoma tigrinum tigrinum c... 40 0.10 2
(CN064750) Ag2_p8_K15_M13R AG Ambystoma tigrinum tigrinum cD... 40 0.10 2
(AM644214) Entamoeba moshkovskii FIC GSS, clone mosh007g08.q1k. 38 0.11 2
(AM205864) Paracentrotus lividus EST, clone MPMGp1172O137Q, ... 38 0.11 2
(CN062394) Ag2_p36_K3_M13R AG Ambystoma tigrinum tigrinum cD... 40 0.11 2
(AZ668506) ENTFA52TF Entamoeba histolytica Sheared DNA Entam... 38 0.11 2
(CN065232) C08_Ag2_p25_N14_M13R AG Ambystoma tigrinum tigrin... 40 0.11 2
(CX090818) EHAEJ75TR E. histolytica Normalized cDNA library ... 38 0.11 3
(CX089804) EHAE428TR E. histolytica Normalized cDNA library ... 38 0.11 3
(AM673933) Entamoeba terrapinae GSS, clone terra257h04.q1k. 38 0.11 2
(AM187359) Paracentrotus lividus EST, clone MPMGp1172E1018Q,... 38 0.11 2
(CN068520) N02_Ag2_p6_M20_M13R AG Ambystoma tigrinum tigrinu... 40 0.11 2
(CN065805) E05_Ag2_p14_E14_M13R AG Ambystoma tigrinum tigrin... 40 0.11 2
(AM185109) Paracentrotus lividus EST, clone MPMGp1172C2312Q,... 38 0.11 2
(CN067711) K11_Ag2_p14_D13_M13R AG Ambystoma tigrinum tigrin... 40 0.11 2
(AM680133) Entamoeba terrapinae GSS, clone terra175a12.q1k. 38 0.11 2
(EE664401) 31965_re880 R. filosa cDNA library Reticulomyxa f... 38 0.11 2
(CO785025) BL282B_D10 6-Day Axolotl Tail Blastema (6DAxBL) A... 40 0.11 2
(CO793940) NT019A_H08 St18-22 Neural tube (NT) Ambystoma mex... 40 0.11 2
(CO789747) NT007D_B01 St18-22 Neural tube (NT) Ambystoma mex... 40 0.11 2
(AM569800) Paracentrotus lividus EST, clone MPMGp1173I14116Q... 38 0.11 2
(CO789456) NT006D_H09 St18-22 Neural tube (NT) Ambystoma mex... 40 0.11 2
(CX083086) EHAB656TR E. histolytica Normalized cDNA library ... 38 0.11 3
(CX080716) EHAA909TR E. histolytica Normalized cDNA library ... 38 0.11 3
(AM546811) Paracentrotus lividus EST, clone MPMGp1171A12212Q... 38 0.11 2
(AM572337) Paracentrotus lividus EST, clone MPMGp1173G14123Q... 38 0.11 2
(AM571479) Paracentrotus lividus EST, clone MPMGp1173B09121Q... 38 0.11 2
(U30148) Entamoeba histolytica p21racD mRNA, partial cds. 34 0.11 3
(AM559547) Paracentrotus lividus EST, clone MPMGp1172P1568Q,... 38 0.11 2
(AM565139) Paracentrotus lividus EST, clone MPMGp1173A05105Q... 38 0.11 2
(AM560342) Paracentrotus lividus EST, clone MPMGp1172C0571Q,... 38 0.11 2
(CX099104) EHAHV30TR E. histolytica Normalized cDNA library ... 34 0.11 3
(CX085540) EHAC691TR E. histolytica Normalized cDNA library ... 34 0.11 3
(AU060584) Dictyostelium discoideum slug cDNA, clone SLK517. 46 0.12 2
(AF310888) Dictyostelium discoideum RacC (racC) gene, comple... 50 0.13 2
(AC146635) Otolemur garnettii clone CH256-105A13, WORKING DR... 42 0.13 6
(DL265071) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 38 0.13 2
(DJ131520) Method for identification of useful proteins deri... 38 0.13 2
(AF031429) Arabidopsis thaliana Rho-like GTP binding protein... 50 0.14 1
(CS026767) Sequence 319 from Patent WO2005014828. 50 0.14 1
(L11593) Slime mold RacC protein mRNA, complete cds. 50 0.14 1
(CU861980) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.14 1
(AZ533820) ENTCU50TF Entamoeba histolytica Sheared DNA Entam... 50 0.14 1
(DV612768) EST1215764 Glossina morsitans morsitans Fat body ... 50 0.14 1
(AU284686) Dictyostelium discoideum gamete cDNA clone:FC-BH0... 50 0.14 1
(AU074748) Dictyostelium discoideum slug cDNA, clone SSL748. 50 0.14 1
(AU074612) Dictyostelium discoideum slug cDNA, clone SSL371. 50 0.14 1
(AU074210) Dictyostelium discoideum slug cDNA, clone SSJ813. 50 0.14 1
(AU061932) Dictyostelium discoideum slug cDNA, clone SLG677. 50 0.14 1
(AU039888) Dictyostelium discoideum slug cDNA, clone SLG677. 50 0.14 1
(C93914) Dictyostelium discoideum slug cDNA, clone SSL860. 50 0.14 1
(BX564078) Glossina morsitans morsitans (Tseatse fly) EST fr... 50 0.14 1
(BX561250) Glossina morsitans morsitans (Tseatse fly) EST fr... 50 0.14 1
(BX552846) Glossina morsitans morsitans (Tseatse fly) EST fr... 50 0.14 1
(BQ613559) rd09c06.y1 Meloidogyne incognita egg SL1 TOPO v1 ... 50 0.14 1
(CS026547) Sequence 99 from Patent WO2005014828. 38 0.14 3
(U29720) Entamoeba histolytica p21racA (Eh racA) gene, compl... 38 0.14 3
(EE138952) SiJWH09BCD Lausanne fire ant library Solenopsis i... 40 0.20 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 0.22 9
(AZ528529) ENTBV74TR Entamoeba histolytica Sheared DNA Entam... 38 0.24 3
(AU261343) Dictyostelium discoideum vegetative cDNA clone:VS... 42 0.24 2
(C93063) Dictyostelium discoideum slug cDNA, clone SSF727. 42 0.24 2
(AY780571) Oryctolagus cuniculus small GTP binding protein C... 46 0.28 2
(AU262562) Dictyostelium discoideum vegetative cDNA clone:VS... 40 0.29 2
(AU037294) Dictyostelium discoideum slug cDNA, clone SSB728. 40 0.29 2
(C93332) Dictyostelium discoideum slug cDNA, clone SSM636. 40 0.29 2
(FL636149) TG_302_C2 Termite gut library Reticulitermes flav... 44 0.29 2
(AU262713) Dictyostelium discoideum vegetative cDNA clone:VS... 42 0.30 2
(AU039071) Dictyostelium discoideum slug cDNA, clone SSM345. 42 0.31 2
(AU038910) Dictyostelium discoideum slug cDNA, clone SSM129. 42 0.31 2
(C91549) Dictyostelium discoideum slug cDNA, clone SSK429. 42 0.31 2
(AU039004) Dictyostelium discoideum slug cDNA, clone SSM262. 42 0.32 2
(BJ351812) Dictyostelium discoideum cDNA clone:dda44n15, 3' ... 42 0.32 2
(AU263136) Dictyostelium discoideum vegetative cDNA clone:VS... 42 0.33 2
(U02927) Dictyostelium discoideum Ax3 Rab4 mRNA, complete cds. 42 0.36 2
(EJ353593) 1092963613461 Global-Ocean-Sampling_GS-28-01-01-1... 42 0.37 2
(EX842468) CBNC11352.rev CBNC Phycomyces blakesleeanus NRRL1... 40 0.37 2
(EX836026) CBNB6179.rev CBNB Phycomyces blakesleeanus NRRL15... 40 0.38 2
(EX842469) CBNC11352.fwd CBNC Phycomyces blakesleeanus NRRL1... 40 0.39 2
(EX836027) CBNB6179.fwd CBNB Phycomyces blakesleeanus NRRL15... 40 0.39 2
(EL572225) Physarum13503 Physarum polycephalum starvation st... 36 0.39 2
(ES577585) FPS015.CR_P15 LSG10-01 Lymnaea stagnalis cDNA clo... 36 0.40 2
(EL567570) Physarum04844 Physarum polycephalum starvation st... 36 0.40 2
(CV181849) tai79c12.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 38 0.40 2
(EL572486) Physarum13502 Physarum polycephalum starvation st... 36 0.40 2
(EL571352) Physarum13501 Physarum polycephalum starvation st... 36 0.40 2
(EL570738) Physarum13504 Physarum polycephalum starvation st... 36 0.40 2
(EC131853) HVE00012249 Hartmannella vermiformis Normalized l... 38 0.40 2
(DY781088) Sf1H04905-5-1 Spodoptera frugiperda Hemocytes cDN... 36 0.40 2
(CK544421) rswhb0_013945.y1 swh Bombyx mori cDNA, mRNA seque... 34 0.41 2
(CB890654) taa76a02.x1 Hydra EST -III Hydra magnipapillata c... 38 0.41 2
(ER501779) 1093015400931 Global-Ocean-Sampling_GS-35-01-01-1... 42 0.45 2
(BM541623) AGENCOURT_6448305 NIH_MGC_71 Homo sapiens cDNA cl... 46 0.50 2
(CR318591) Zebrafish DNA sequence from clone CH211-102L7 in ... 48 0.54 1
(EE674317) EST1428 Mycelia Grown in Nitrogen Limited Media C... 48 0.54 1
(EC133502) HVE00006068 Hartmannella vermiformis Regular Larg... 48 0.54 1
(EC129501) HVE00002866 Hartmannella vermiformis Normalized l... 48 0.54 1
(EC129404) HVE00004222 Hartmannella vermiformis Regular Smal... 48 0.54 1
(DN557118) Ls_af1_10h08_T7 Litomosoides sigmodontis adult fe... 48 0.54 1
(BJ979226) Reticulitermes speratus gut symbiotic protist cDN... 48 0.54 1
(BJ979055) Reticulitermes speratus gut symbiotic protist cDN... 48 0.54 1
(FL644300) TS37-G10 Reticulitermes flavipes symbiont library... 48 0.54 1
(AF310889) Dictyostelium discoideum RacD (racD) gene, comple... 40 0.76 3
(AM482964) Vitis vinifera, whole genome shotgun sequence, co... 40 0.90 3
(U29724) Entamoeba histolytica p21racF (Eh racF) pseudogene. 36 0.92 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 32 0.96 9
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 0.98 7
(EG360743) SA_RG0_59b07_SP6 Dogfish Shark Rectal Gland, Norm... 40 1.00 2
(FC682992) CAXX16771.fwd CAXX Lottia gigantea from male gona... 36 1.1 2
(FD098660) CBFH5233.b1 CBFH: Normalized blue catfish cDNA li... 36 1.1 3
(CX098540) EHAHN17TR E. histolytica Normalized cDNA library ... 36 1.2 2
(CX083818) EHABH56TR E. histolytica Normalized cDNA library ... 36 1.2 2
(FD080783) CBFH21675.b1 CBFH: Normalized blue catfish cDNA l... 36 1.2 3
(ES652201) SA_MX2_07g07_SP6 Dogfish Shark Multiple Tissues, ... 40 1.3 2
(EE049283) SA_RG0_08d06_SP6 Dogfish Shark Rectal Gland, Norm... 40 1.3 2
(EG360426) SA_RG0_70f09_SP6 Dogfish Shark Rectal Gland, Norm... 40 1.3 2
(EL619058) OvAE376 Opisthorchis viverrini lambda TriplEx2 Li... 44 1.3 2
(AC154404) Mus musculus BAC clone RP24-244M4 from 14, comple... 46 1.3 3
(CN554575) tae30g01.x1 Hydra EST Darmstadt I Hydra magnipapi... 40 1.3 2
(GH161253) LE_MX1_52B06_SP6 Skate Multiple Tissues, Normaliz... 38 1.3 2
(EE049282) SA_RG0_08d05_SP6 Dogfish Shark Rectal Gland, Norm... 40 1.3 2
(FC769533) CBBN5111.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 36 1.3 2
(AF309947) Dictyostelium discoideum Rac1A (rac1A) gene, comp... 38 1.3 3
(FC716359) CBBG10761.fwd CBBG Lottia gigantea 12,15,18h embr... 40 1.4 2
(FC592542) CAXP7078.fwd CAXP Lottia gigantea from head, foot... 36 1.4 2
(FG299261) 1108793332135 New World Screwworm Larvae 9387 EST... 34 1.5 2
(FG299848) 1108793348083 New World Screwworm Larvae 9387 EST... 34 1.5 2
(FC766383) CBBN3100.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 40 1.5 2
(CV301804) MM1_B04 Young roots probed with 7 week old root e... 38 1.5 2
(BP937267) Plutella xylostella mRNA, clone: PXG+0410, 5'EST. 32 1.5 2
(FC646619) CAXU8529.fwd CAXU Lottia gigantea from female gon... 36 1.5 2
(AL163246) Homo sapiens chromosome 21 segment HS21C046. 38 1.5 6
(FC697078) CAXX5898.fwd CAXX Lottia gigantea from male gonad... 40 1.5 2
(EK120545) 1092963362941 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.6 3
(AZ693168) ENTHL65TR Entamoeba histolytica Sheared DNA Entam... 36 1.7 2
(AC225468) Medicago truncatula clone mth2-175c18, WORKING DR... 36 2.0 5
(CR854911) Zebrafish DNA sequence from clone DKEY-46O18 in l... 46 2.1 1
(BX936323) Zebrafish DNA sequence from clone CH211-213J22 in... 46 2.1 1
(BX088691) Zebrafish DNA sequence from clone CH211-210P4 in ... 46 2.1 1
(BC095393) Danio rerio zgc:110734, mRNA (cDNA clone MGC:1107... 46 2.1 1
(BV598479) S217P6336FE10.T0 Noemie Pan troglodytes troglodyt... 46 2.1 1
(AC186368) Pan troglodytes chromosome 7 clone CH251-329G12, ... 46 2.1 1
(EF085880) Picea sitchensis clone WS0299_H12 unknown mRNA. 46 2.1 1
(AJ496229) Nicotiana tabacum partial mRNA for putative rac p... 46 2.1 1
(U02925) Dictyostelium discoideum Ax3 Rab11 mRNA, complete cds. 46 2.1 1
(AF310897) Dictyostelium discoideum RacL (racL) gene, comple... 46 2.1 1
(AL359273) Human DNA sequence from clone RP11-376N17 on chro... 46 2.1 1
(CU694801) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.1 1
(AC027046) Homo sapiens chromosome 1 clone RP11-604O8 map 1,... 46 2.1 1
(CU302260) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 2.1 1
(CR352211) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.1 1
(AL136113) Human DNA sequence *** SEQUENCING CANCELLED *** f... 46 2.1 1
(AC230971) Bos taurus clone CH240-494E5, WORKING DRAFT SEQUE... 46 2.1 1
(AC222519) Echinops telfairi clone CH238-194M22, WORKING DRA... 46 2.1 1
(AC217860) Echinops telfairi clone CH238-33K20, WORKING DRAF... 46 2.1 1
(AC167406) Bos taurus clone CH240-211C13, WORKING DRAFT SEQU... 46 2.1 1
(AC025374) Homo sapiens chromosome 1 clone RP11-25E12 map 1,... 46 2.1 1
(FI005000) CHO_OF6896xp22f1.ab1 CHO_OF6 Nicotiana tabacum ge... 46 2.1 1
(AM659568) Entamoeba moshkovskii FIC GSS, clone mosh090h03.p1k. 46 2.1 1
(AM657551) Entamoeba moshkovskii FIC GSS, clone mosh062c02.q1k. 46 2.1 1
(EI013652) bb36g03.r Dekkera bruxellensis Random Genomic Lib... 46 2.1 1
(AG561777) Mus musculus molossinus DNA, clone:MSMg01-481F14.... 46 2.1 1
(ES256414) WS03729.C21_B16 SS-B-N-22 Picea sitchensis cDNA c... 46 2.1 1
(EG351895) SAAH-aad20c08.g1 Agen 0058 Schmidtea mediterranea... 46 2.1 1
(EE719065) AGENCOURT_87874955 NIH_ZGC_26 Danio rerio cDNA cl... 46 2.1 1
(EE475856) BNYS2DCT_UP_031_H09_03MAR2005_065 Brassica napus ... 46 2.1 1
(EC165489) MNE00001740 Monosiga ovata Non-normalized Monosig... 46 2.1 1
(EB376037) nbc24e05.y1 Rabbit trigeminal nerve. Unnormalized... 46 2.1 1
(DY832570) CTOY8095.b1_M07.ab1 CTO(XYZ) dandelion Taraxacum ... 46 2.1 1
(DY830027) CTOY5633.b1_A18.ab1 CTO(XYZ) dandelion Taraxacum ... 46 2.1 1
(DY821796) CTOY13621.b1_J21.ab1 CTO(XYZ) dandelion Taraxacum... 46 2.1 1
(DY813796) CTOX22546.b1_C22.ab1 CTO(XYZ) dandelion Taraxacum... 46 2.1 1
(DW147294) CLVX12369.b1_A21.ab1 CLV(XYZ) lettuce virosa Lact... 46 2.1 1
(DW146133) CLVX11243.b1_F03.ab1 CLV(XYZ) lettuce virosa Lact... 46 2.1 1
(DV586239) AGENCOURT_61900037 NIH_ZGC_14 Danio rerio cDNA cl... 46 2.1 1
(AU305480) Zinnia elegans cDNA, clone:Z14795. 46 2.1 1
(DR937459) EST1128998 Aquilegia cDNA library Aquilegia formo... 46 2.1 1
(DR922231) EST1113770 Aquilegia cDNA library Aquilegia formo... 46 2.1 1
(DR495940) WS0299.BR_H12 SS-IB-A-FL-15 Picea sitchensis cDNA... 46 2.1 1
(DN764427) AGENCOURT_48360817 NIH_ZGC_6 Danio rerio cDNA clo... 46 2.1 1
(DB706461) Solanum lycopersicum cDNA, clone: LEFL1091CE07, 5... 46 2.1 1
(AM581897) Paracentrotus lividus EST, clone MPMGp1173C0832Q,... 46 2.1 1
(CX586341) TTE00023044 Amplicon Express - Conjugative Form T... 46 2.1 1
(CV226913) WS0165.B21_K11 PT-DX-A-7 Populus trichocarpa cDNA... 46 2.1 1
(CO931955) AGENCOURT_30434977 NIH_ZGC_17 Danio rerio cDNA cl... 46 2.1 1
(CO371250) tah60e08.y1 Hydra EST UCI 5 Hydra magnipapillata ... 46 2.1 1
(CK714685) ZF201-P00030-DEPE-F_M20 GISZF001_ma Danio rerio c... 46 2.1 1
(CK697521) ZF101-P00076-DEPE-F_H12 GISZF001_ra Danio rerio c... 46 2.1 1
(CK395399) AGENCOURT_17391635 NIH_ZGC_4 Danio rerio cDNA clo... 46 2.1 1
(AJ778021) Populus euphratica EST, clone P0000400038C09F1. 46 2.1 1
(CD581279) RK012A2C10.T3 Zebrafish Kidney Marrow cDNA librar... 46 2.1 1
(CB887099) Lice_02_B23_T3 Body louse cDNA library Pediculus ... 46 2.1 1
(CA302396) taa14d10.y1 Hydra cDNA library Hydra magnipapilla... 46 2.1 1
(CA226651) SCRLFL3008G04.g Saccharum officinarum FL3 Sacchar... 46 2.1 1
(BY884574) Cryptomeria japonica cDNA clone: CMFL019_E22, 5'e... 46 2.1 1
(BQ263761) faa16g03.y1 Sugano SJD adult male Danio rerio cDN... 46 2.1 1
(BM859463) fy57a12.y1 Sugano SJD adult male Danio rerio cDNA... 46 2.1 1

>(C90973) Dictyostelium discoideum slug cDNA, clone SSJ369.
Length = 643

Score = 751 bits (379), Expect(2) = 0.0
Identities = 379/379 (100%)
Strand = Plus / Plus


Query: 148 gtttgtgttgttggcgaaggtggaaattggtaaaaacatcaatgttattcagttatacat 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 gtttgtgttgttggcgaaggtggaaattggtaaaaacatcaatgttattcagttatacat 97


Query: 208 caaattcaatttcaaatgaatatcaaccaacagtatttgataactattcaactttattaa 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 caaattcaatttcaaatgaatatcaaccaacagtatttgataactattcaactttattaa 157


Query: 268 tgcataataaaaacccatataatttatcattgtgggatactgcaggtcaagaagagttta 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tgcataataaaaacccatataatttatcattgtgggatactgcaggtcaagaagagttta 217


Query: 328 gtaaattaaggaaggttaagttatcctcaaactgatgtatttttattatgtttttcactt 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 gtaaattaaggaaggttaagttatcctcaaactgatgtatttttattatgtttttcactt 277


Query: 388 ataaatccatcatcattttcaaatattttagattcatgggtacaggaattaaatgaaaat 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ataaatccatcatcattttcaaatattttagattcatgggtacaggaattaaatgaaaat 337


Query: 448 tgcccaaataccccattggttttggttggtactcaaatggatttaaaatcaaattcagtt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgcccaaataccccattggttttggttggtactcaaatggatttaaaatcaaattcagtt 397


Query: 508 atactggatagactatgtg 526
|||||||||||||||||||
Sbjct: 398 atactggatagactatgtg 416

Score = 276 bits (139), Expect(2) = 0.0
Identities = 139/139 (100%)
Strand = Plus / Plus


Query: 535 caattaccaatttcaactcaacaaggtattgaactttcaaagaaaattaatgcatttgat 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caattaccaatttcaactcaacaaggtattgaactttcaaagaaaattaatgcatttgat 484


Query: 595 tttgtggaatgtagtgcactaacacaaaagaatttacatttagtatttgaaaaagcaatt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tttgtggaatgtagtgcactaacacaaaagaatttacatttagtatttgaaaaagcaatt 544


Query: 655 gacgcttgtgaagctcatc 673
|||||||||||||||||||
Sbjct: 545 gacgcttgtgaagctcatc 563

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 829,333,035
Number of extensions: 52820584
Number of successful extensions: 4690747
Number of sequences better than 10.0: 794
Length of query: 830
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 806
Effective length of database: 99,340,224,878
Effective search space: 80068221251668
Effective search space used: 80068221251668
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.29
Homology vs Protein
Query= Contig-U04314-1 (Contig-U04314-1Q) /CSM_Contig/Contig-U04314-1Q.Seq.d
(830 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CR382128_622(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 121 8e-40
BT076635_1(BT076635|pid:none) Caligus rogercresseyi clone crog-e... 120 2e-39
AF209750_1(AF209750|pid:none) Yarrowia lipolytica Cdc42p (CDC42)... 118 5e-39
BT077356_1(BT077356|pid:none) Lepeophtheirus salmonis Pacific fo... 118 9e-39
EU541371_1(EU541371|pid:none) Synthetic construct EGFP-Pak1-Rac1... 114 1e-38
EU438750_1(EU438750|pid:none) Synthetic construct dsRed1/Pak1/Ra... 114 1e-38
AK166383_1(AK166383|pid:none) Mus musculus mammary gland RCB-052... 114 1e-38
(O95916) Putative Ras-related C3 botulinum toxin substrate 4 (p2... 118 1e-36
AE014297_4321(AE014297|pid:none) Drosophila melanogaster chromos... 114 4e-36
BC078068_1(BC078068|pid:none) Xenopus laevis rac-2 protein, mRNA... 113 2e-35
BC082361_1(BC082361|pid:none) Xenopus laevis cDNA clone MGC:8156... 112 4e-35
AB051828_1(AB051828|pid:none) Xenopus laevis xG28K mRNA for GTP-... 111 9e-35
GN079631_1(GN079631|pid:none) Sequence 234 from Patent WO2009027... 98 2e-33
BC167318_1(BC167318|pid:none) Xenopus tropicalis ras homolog gen... 109 1e-32
BC092896_1(BC092896|pid:none) Danio rerio ras homolog gene famil... 105 2e-32
(Q9GPQ8) RecName: Full=Rho-related protein racL; Flags: Precurso... 95 2e-32
EF529818_1(EF529818|pid:none) Musa acuminata rop (rop1) mRNA, co... 92 2e-31
CR382138_155(CR382138|pid:none) Debaryomyces hansenii strain CBS... 89 3e-31
EU178798_1(EU178798|pid:none) Medicago truncatula strain Jemalon... 93 3e-31
(Q41253) RecName: Full=Rac-like GTP-binding protein RAC13; Flags... 92 6e-31
AY883090_1(AY883090|pid:none) Vigna radiata small GTP-binding pr... 93 7e-31
EF140700_1(EF140700|pid:none) Lilium longiflorum LLP-Rop1 (LLP-R... 90 7e-31
CS026459_1(CS026459|pid:none) Sequence 11 from Patent WO20050148... 92 9e-31
AF115476_1(AF115476|pid:none) Physcomitrella patens rac-like GTP... 90 9e-31
AF233446_1(AF233446|pid:none) Physcomitrella patens rac 1 protei... 90 9e-31
EF144316_1(EF144316|pid:none) Populus trichocarpa clone PX0015_I... 91 1e-30
(Q41254) RecName: Full=Rac-like GTP-binding protein RAC9; Flags:... 91 2e-30
GN080029_1(GN080029|pid:none) Sequence 632 from Patent WO2009027... 90 2e-30
CS026617_1(CS026617|pid:none) Sequence 169 from Patent WO2005014... 90 2e-30
AF233447_1(AF233447|pid:none) Physcomitrella patens rac 4 protei... 89 2e-30
CS560140_1(CS560140|pid:none) Sequence 727 from Patent WO2006032... 91 2e-30
GN079551_1(GN079551|pid:none) Sequence 154 from Patent WO2009027... 89 2e-30
(Q9Z1Y0) RecName: Full=Rho-related GTP-binding protein RhoV; Alt... 99 3e-30
AF165925_1(AF165925|pid:none) Gossypium hirsutum RAC-like G-prot... 89 3e-30
BT004252_1(BT004252|pid:none) Arabidopsis thaliana clone RAFL15-... 89 3e-30
AJ439334_1(AJ439334|pid:none) Hordeum vulgare mRNA for putative ... 91 4e-30
GN080123_1(GN080123|pid:none) Sequence 726 from Patent WO2009027... 91 4e-30
AJ619853_1(AJ619853|pid:none) Medicago sativa mRNA for small GTP... 91 4e-30
FJ159428_1(FJ159428|pid:none) Scoparia dulcis clone Sdrac rac-li... 90 4e-30
BC019353_1(BC019353|pid:none) Homo sapiens ras homolog gene fami... 99 6e-30
(Q8VDU1) RecName: Full=Rho-related GTP-binding protein RhoV; &A... 99 6e-30
GN080091_1(GN080091|pid:none) Sequence 694 from Patent WO2009027... 89 6e-30
AM431253_3(AM431253|pid:none) Vitis vinifera contig VV78X256435.... 89 8e-30
CS559704_1(CS559704|pid:none) Sequence 291 from Patent WO2006032... 86 1e-29
AB024996_1(AB024996|pid:none) Cicer arietinum mRNA for rac-type ... 89 1e-29
EF082538_1(EF082538|pid:none) Picea sitchensis clone WS02721_K09... 88 1e-29
(Q40220) RecName: Full=Rac-like GTP-binding protein RAC2; Flags:... 88 1e-29
GN080119_1(GN080119|pid:none) Sequence 722 from Patent WO2009027... 86 1e-29
(Q6ZHA3) RecName: Full=Rac-like GTP-binding protein 6; AltName: ... 86 1e-29
AJ508670_1(AJ508670|pid:none) Ciona intestinalis partial mRNA fo... 110 1e-29
AB079131_1(AB079131|pid:none) Homo sapiens ARHV mRNA for WRCH1-r... 98 1e-29
GN080121_1(GN080121|pid:none) Sequence 724 from Patent WO2009027... 89 1e-29
AJ508676_1(AJ508676|pid:none) Ciona intestinalis mRNA for TC10 p... 97 1e-29
GN080043_1(GN080043|pid:none) Sequence 646 from Patent WO2009027... 87 2e-29
AJ344223_1(AJ344223|pid:none) Hordeum vulgare mRNA for RACB prot... 86 2e-29
GN080021_1(GN080021|pid:none) Sequence 624 from Patent WO2009027... 87 2e-29
CS026479_1(CS026479|pid:none) Sequence 31 from Patent WO20050148... 87 2e-29
GN079693_1(GN079693|pid:none) Sequence 296 from Patent WO2009027... 89 2e-29
CS026461_1(CS026461|pid:none) Sequence 13 from Patent WO20050148... 87 2e-29
GN080025_1(GN080025|pid:none) Sequence 628 from Patent WO2009027... 87 3e-29
GN079473_1(GN079473|pid:none) Sequence 76 from Patent WO20090275... 87 3e-29
GN080019_1(GN080019|pid:none) Sequence 622 from Patent WO2009027... 85 5e-29
GN080145_1(GN080145|pid:none) Sequence 748 from Patent WO2009027... 86 6e-29
(Q38903) RecName: Full=Rac-like GTP-binding protein ARAC2; AltNa... 85 8e-29
AC140545_17(AC140545|pid:none) Medicago truncatula clone mth2-11... 84 2e-28
AL049658_9(AL049658|pid:none) Arabidopsis thaliana DNA chromosom... 88 3e-28
CS559856_1(CS559856|pid:none) Sequence 443 from Patent WO2006032... 86 4e-28
AJ278664_1(AJ278664|pid:none) Zea mays mRNA for putative Rop fam... 86 4e-28
FN319029_1(FN319029|pid:none) Schistosoma japonicum isolate Anhu... 97 5e-28
GN079563_1(GN079563|pid:none) Sequence 166 from Patent WO2009027... 126 1e-27
AF140785_1(AF140785|pid:none) Schistosoma mansoni Rho GTPase mRN... 99 1e-27
AY892146_1(AY892146|pid:none) Synthetic construct Homo sapiens c... 125 1e-27
AY889694_1(AY889694|pid:none) Synthetic construct Homo sapiens c... 125 1e-27
AF372468_1(AF372468|pid:none) Gallus gallus Rho small GTPase TC1... 125 1e-27
AK067796_1(AK067796|pid:none) Oryza sativa Japonica Group cDNA c... 90 2e-27
GN079621_1(GN079621|pid:none) Sequence 224 from Patent WO2009027... 125 2e-27
AY865567_1(AY865567|pid:none) Danio rerio ras-like protein Cdc42... 125 2e-27
AY987399_1(AY987399|pid:none) Phallusia mammilata CDC42 mRNA, co... 125 2e-27
GN079467_1(GN079467|pid:none) Sequence 70 from Patent WO20090275... 81 3e-27
AF174644_1(AF174644|pid:none) Xenopus laevis rac GTPase mRNA, co... 124 3e-27
AB074145_1(AB074145|pid:none) Synthetic construct gene for Raich... 124 3e-27
BT044876_1(BT044876|pid:none) Salmo salar clone ssal-rgf-506-106... 124 3e-27
AF153428_1(AF153428|pid:none) Drosophila melanogaster CDC42 prot... 124 3e-27
(P62998) RecName: Full=Ras-related C3 botulinum toxin substrate ... 124 3e-27
AF153424_1(AF153424|pid:none) Drosophila melanogaster CDC42 prot... 124 3e-27
AK008435_1(AK008435|pid:none) Mus musculus adult male small inte... 124 3e-27
CS026539_1(CS026539|pid:none) Sequence 91 from Patent WO20050148... 124 3e-27
GN079531_1(GN079531|pid:none) Sequence 134 from Patent WO2009027... 124 3e-27
DQ165078_1(DQ165078|pid:none) Homo sapiens ras-related C3 botuli... 124 3e-27
BT045529_1(BT045529|pid:none) Salmo salar clone ssal-rgf-524-088... 124 3e-27
FJ629590_1(FJ629590|pid:none) Synthetic construct Drosophila mel... 124 3e-27
(Q17031) RecName: Full=Cdc42 homolog; AltName: Full=25 kDa GTP-b... 124 3e-27
FN357462_11(FN357462|pid:none) Schistosoma mansoni genome sequen... 97 3e-27
AJ508667_1(AJ508667|pid:none) Ciona intestinalis mRNA for Rac1 p... 124 4e-27
(P40792) RecName: Full=Ras-related protein Rac1; Flags: Precurso... 124 5e-27
BT045298_1(BT045298|pid:none) Salmo salar clone ssal-rgf-517-316... 124 5e-27
BX571960_4(BX571960|pid:none) Zebrafish DNA sequence from clone ... 124 5e-27
BC071369_1(BC071369|pid:none) Danio rerio ras-related C3 botulin... 124 5e-27
AK343086_1(AK343086|pid:none) Acyrthosiphon pisum ACYPI000070 mR... 123 6e-27
BC087999_1(BC087999|pid:none) Xenopus tropicalis ras-related C3 ... 123 6e-27
Z69980_1(Z69980|pid:none) A.gambiae mRNA for GTP-binding protein... 123 6e-27
(P34146) RecName: Full=Rho-related protein rac1C; Flags: Precurs... 123 6e-27
BC155847_1(BC155847|pid:none) Danio rerio zgc:175209, mRNA (cDNA... 123 8e-27
(O76321) RecName: Full=Rho-related protein racG; Flags: Precurso... 123 8e-27
AY813134_1(AY813134|pid:none) Schistosoma japonicum SJCHGC01977 ... 95 1e-26
(P34144) RecName: Full=Rho-related protein rac1A; Flags: Precurs... 122 1e-26
BT045348_1(BT045348|pid:none) Salmo salar clone ssal-rgf-518-373... 122 1e-26
AY190720_1(AY190720|pid:none) Pagrus major ras-related C3 botuli... 122 1e-26
(P17081) RecName: Full=Rho-related GTP-binding protein RhoQ; Alt... 122 1e-26
CS026611_1(CS026611|pid:none) Sequence 163 from Patent WO2005014... 122 1e-26
DQ206494_1(DQ206494|pid:none) Priapulus caudatus isolate TOA4 ce... 122 1e-26
(O14426) RecName: Full=Cell division control protein 42 homolog;... 122 1e-26
AY282417_1(AY282417|pid:none) Aplysia californica Rac mRNA, comp... 122 2e-26
(Q8R527) RecName: Full=Rho-related GTP-binding protein RhoQ; Alt... 122 2e-26
AF153426_1(AF153426|pid:none) Drosophila melanogaster CDC42 prot... 122 2e-26
BT082911_1(BT082911|pid:none) Anoplopoma fimbria clone afim-evh-... 121 2e-26
L11588_1(L11588|pid:none) Dictyostelium discoideum rac1A protein... 121 2e-26
(P48554) RecName: Full=Ras-related protein Rac2; Flags: Precurso... 121 2e-26
(P15153) RecName: Full=Ras-related C3 botulinum toxin substrate ... 121 2e-26
M64595_1(M64595|pid:none) Human small G protein (Gx) mRNA, 3' end. 121 2e-26
Z82188_6(Z82188|pid:none) Human DNA sequence from clone RP1-151B... 121 2e-26
AB060650_1(AB060650|pid:none) Mus musculus mRNA for small GTPase... 121 2e-26
(Q9TU25) RecName: Full=Ras-related C3 botulinum toxin substrate ... 121 2e-26
BT045835_1(BT045835|pid:none) Salmo salar clone ssal-rgf-534-037... 121 3e-26
AJ851813_1(AJ851813|pid:none) Gallus gallus mRNA for hypothetica... 121 3e-26
(Q05144) RecName: Full=Ras-related C3 botulinum toxin substrate ... 120 4e-26
AY574638_1(AY574638|pid:none) Rhopalosiphum padi Rho family smal... 120 4e-26
AK007561_1(AK007561|pid:none) Mus musculus 10 day old male pancr... 120 4e-26
BC135751_1(BC135751|pid:none) Xenopus tropicalis ras-related C3 ... 120 4e-26
AF234180_1(AF234180|pid:none) Suillus bovinus small GTPase CDC42... 120 4e-26
BT046927_1(BT046927|pid:none) Salmo salar clone ssal-evf-537-294... 120 4e-26
AK167400_1(AK167400|pid:none) Mus musculus 15 days pregnant adul... 120 5e-26
EU637020_14(EU637020|pid:none) Philodina roseola peptidylprolyl ... 120 5e-26
AY040368_1(AY040368|pid:none) Schizophyllum commune small GTPase... 120 5e-26
PDBN(1CEE)A MOL_ID: 1;MOL_ID: 1; MOLECULE: GTP-BINDING RHO-LIKE ... 120 7e-26
AY780571_1(AY780571|pid:none) Oryctolagus cuniculus small GTP bi... 120 7e-26
BT082948_1(BT082948|pid:none) Anoplopoma fimbria clone afim-evh-... 120 7e-26
DQ402135_1(DQ402135|pid:none) Tuber borchii small GTPase CDC42 (... 120 7e-26
AK051543_1(AK051543|pid:none) Mus musculus 12 days embryo spinal... 120 7e-26
BT073747_1(BT073747|pid:none) Oncorhynchus mykiss clone omyk-evo... 120 7e-26
AK297465_1(AK297465|pid:none) Homo sapiens cDNA FLJ55107 complet... 120 7e-26
EU541372_1(EU541372|pid:none) Synthetic construct EGFP-Pak1-Cdc4... 120 7e-26
EU438751_1(EU438751|pid:none) Synthetic construct dsRed1/Pak1/Cd... 120 7e-26
PDBN(1CF4)A MOL_ID: 1;MOL_ID: 1; MOLECULE: CDC42; MOLECULE: CDC4... 120 7e-26
(Q4R4R6) RecName: Full=Cell division control protein 42 homolog;... 120 7e-26
PDBN(1A4R)A MOL_ID: 1;MOL_ID: 1; MOLECULE: G25K GTP-BINDING PROT... 120 7e-26
AY890747_1(AY890747|pid:none) Synthetic construct Homo sapiens c... 120 7e-26
BC122003_1(BC122003|pid:none) Xenopus tropicalis cell division c... 120 7e-26
AJ508665_1(AJ508665|pid:none) Ciona intestinalis mRNA for Cdc42 ... 120 7e-26
AK145659_1(AK145659|pid:none) Mus musculus blastocyst blastocyst... 120 7e-26
AY542314_1(AY542314|pid:none) Pneumocystis carinii CDC42p (cdc42... 120 7e-26
GN079999_1(GN079999|pid:none) Sequence 602 from Patent WO2009027... 97 8e-26
BC089688_1(BC089688|pid:none) Xenopus tropicalis ras homolog gen... 111 8e-26
GN079651_1(GN079651|pid:none) Sequence 254 from Patent WO2009027... 119 9e-26
AL663030_40(AL663030|pid:none) Mouse DNA sequence from clone RP2... 119 9e-26
CS026565_1(CS026565|pid:none) Sequence 117 from Patent WO2005014... 119 9e-26
BT046314_1(BT046314|pid:none) Salmo salar clone ssal-rgb2-571-33... 119 9e-26
FN357462_12(FN357462|pid:none) Schistosoma mansoni genome sequen... 92 1e-25
(O88931) RecName: Full=Ras-related C3 botulinum toxin substrate ... 119 1e-25
BC114272_1(BC114272|pid:none) Danio rerio zgc:136799, mRNA (cDNA... 119 1e-25
AB012667_1(AB012667|pid:none) Ciona savignyi mRNA for CsCDC42, c... 119 1e-25
AF085341_1(AF085341|pid:none) Cavia porcellus ras-related protei... 119 1e-25
AB260937_1(AB260937|pid:none) Epichloe festucae racA mRNA for Ra... 119 1e-25
BT049366_1(BT049366|pid:none) Salmo salar clone ssal-sjb-006-227... 119 2e-25
(P60952) RecName: Full=Cell division control protein 42 homolog;... 119 2e-25
BC064792_1(BC064792|pid:none) Mus musculus cell division cycle 4... 119 2e-25
BC074226_1(BC074226|pid:none) Xenopus laevis MGC83410 protein, m... 119 2e-25
(Q03206) RecName: Full=Ras-related protein ced-10; AltName: Full... 119 2e-25
AY865566_1(AY865566|pid:none) Danio rerio ras-like protein Cdc42... 119 2e-25
AY890847_1(AY890847|pid:none) Synthetic construct Homo sapiens c... 118 2e-25
AK168076_1(AK168076|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 118 2e-25
BT074645_1(BT074645|pid:none) Osmerus mordax clone omor-eva-007-... 118 2e-25
GN079587_1(GN079587|pid:none) Sequence 190 from Patent WO2009027... 118 3e-25
AE017343_497(AE017343|pid:none) Cryptococcus neoformans var. neo... 117 4e-25
AF547164_1(AF547164|pid:none) Brugia malayi GTP-binding protein ... 117 5e-25
CU928170_331(CU928170|pid:none) Kluyveromyces thermotolerans str... 117 5e-25
(P34148) RecName: Full=Rho-related protein racB; Flags: Precurso... 117 5e-25
AF310887_1(AF310887|pid:none) Dictyostelium discoideum RacB (rac... 117 5e-25
BT078770_1(BT078770|pid:none) Esox lucius clone eluc-evq-514-303... 117 5e-25
DQ081716_1(DQ081716|pid:none) Paracoccidioides brasiliensis Rac1... 117 6e-25
BC136059_1(BC136059|pid:none) Xenopus tropicalis hypothetical pr... 117 6e-25
GN079517_1(GN079517|pid:none) Sequence 120 from Patent WO2009027... 117 6e-25
EU625509_1(EU625509|pid:none) Neurospora crassa Rho-type GTPase ... 117 6e-25
AY540629_1(AY540629|pid:none) Aspergillus niger RacA gene, compl... 117 6e-25
CS026623_1(CS026623|pid:none) Sequence 175 from Patent WO2005014... 117 6e-25
AM774590_1(AM774590|pid:none) Claviceps purpurea rac gene for Rh... 116 8e-25
GN079625_1(GN079625|pid:none) Sequence 228 from Patent WO2009027... 116 8e-25
(P19073) RecName: Full=Cell division control protein 42; AltName... 116 1e-24
DQ414554_1(DQ414554|pid:none) Suberites domuncula Rac gene, comp... 116 1e-24
CS026775_1(CS026775|pid:none) Sequence 327 from Patent WO2005014... 116 1e-24
AY386260_1(AY386260|pid:none) Schizophyllum commune small GTPase... 116 1e-24
(O00212) RecName: Full=Rho-related GTP-binding protein RhoD; Alt... 86 1e-24
AJ508672_1(AJ508672|pid:none) Ciona intestinalis mRNA for Rac5 p... 115 1e-24
AY635990_1(AY635990|pid:none) Monacrosporium haptotylum GTPase (... 115 2e-24
BT081450_1(BT081450|pid:none) Rana catesbeiana clone rcat-evr-50... 115 2e-24
CR382121_175(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 115 2e-24
BX248118_2(BX248118|pid:none) Zebrafish DNA sequence from clone ... 115 2e-24
S54295(S54295;S65351)GTP-binding protein Rac1 - fruit fly (Droso... 115 2e-24
T23283(T23283)hypothetical protein K03D3.10 - Caenorhabditis ele... 114 3e-24
(Q94124) RecName: Full=Ras-related protein rac-2; Flags: Precurs... 114 3e-24
FJ387011_1(FJ387011|pid:none) Placozoa sp. H2 cell division cont... 114 4e-24
(Q9HF56) RecName: Full=Cell division control protein 42; Flags: ... 114 4e-24
AK157518_1(AK157518|pid:none) Mus musculus activated spleen cDNA... 114 5e-24
GN079655_1(GN079655|pid:none) Sequence 258 from Patent WO2009027... 114 5e-24
AB209218_1(AB209218|pid:none) Homo sapiens mRNA for TC10-like Rh... 114 5e-24
AB464131_1(AB464131|pid:none) Synthetic construct DNA, clone: pF... 114 5e-24
EF060241_1(EF060241|pid:none) Magnaporthe grisea GTP-binding pro... 114 5e-24
(Q9ER71) RecName: Full=Rho-related GTP-binding protein RhoJ; Alt... 114 5e-24
BC024626_1(BC024626|pid:none) Mus musculus ras homolog gene fami... 114 5e-24
AF087862_1(AF087862|pid:none) Homo sapiens raslp2 mRNA, complete... 114 5e-24
DQ206462_1(DQ206462|pid:none) Platynereis dumerilii isolate TOA4... 113 7e-24
AY398322_1(AY398322|pid:none) Danio rerio clone RK073A1F03 cell ... 113 7e-24
(Q01112) RecName: Full=Cell division control protein 42 homolog;... 113 9e-24
EU625508_1(EU625508|pid:none) Neurospora crassa small GTPase RAC... 113 9e-24
CS026577_1(CS026577|pid:none) Sequence 129 from Patent WO2005014... 113 9e-24
DQ206545_1(DQ206545|pid:none) Leucosolenia sp. AR-2003 isolate T... 112 1e-23
DQ206569_1(DQ206569|pid:none) Aphrocallistes vastus isolate TOA4... 112 1e-23
GN079623_1(GN079623|pid:none) Sequence 226 from Patent WO2009027... 112 2e-23
AM920435_753(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 112 2e-23
BC059300_1(BC059300|pid:none) Xenopus laevis hypothetical protei... 112 2e-23
AF217198_1(AF217198|pid:none) Emericella nidulans MODA (modA) mR... 112 2e-23
AK006363_1(AK006363|pid:none) Mus musculus adult male testis cDN... 111 3e-23
BC083656_1(BC083656|pid:none) Rattus norvegicus RSA-14-44 protei... 110 4e-23
CU633899_508(CU633899|pid:none) Podospora anserina genomic DNA c... 110 4e-23
AM270040_28(AM270040|pid:none) Aspergillus niger contig An02c046... 110 6e-23
AY540628_1(AY540628|pid:none) Aspergillus niger CftA mRNA, parti... 110 6e-23
AF330694_1(AF330694|pid:none) Penicillium marneffei CDC42-like p... 110 6e-23
BC077840_1(BC077840|pid:none) Xenopus laevis hypothetical LOC503... 110 7e-23
AF250928_1(AF250928|pid:none) Pyricularia grisea GTP-binding pro... 110 7e-23
AF495535_1(AF495535|pid:none) Ustilago maydis Rac1 GTP binding p... 109 1e-22
EU477372_1(EU477372|pid:none) Mus musculus testis specific expre... 109 1e-22
CR761281_1(CR761281|pid:none) Xenopus tropicalis finished cDNA, ... 81 1e-22
AY149343_1(AY149343|pid:none) Rattus norvegicus RSA-14-44 mRNA, ... 109 1e-22
AY028946_1(AY028946|pid:none) Colletotrichum trifolii GTPase CDC... 109 1e-22
AY438585_1(AY438585|pid:none) Fucus distichus Rho family GTPase ... 109 1e-22
AF235004_1(AF235004|pid:none) Suillus bovinus small GTPase Rac1 ... 108 2e-22
BC078037_1(BC078037|pid:none) Xenopus laevis hypothetical LOC503... 108 2e-22
EF525177_1(EF525177|pid:none) Paracoccidioides brasiliensis Rho-... 108 2e-22
AE017353_7(AE017353|pid:none) Cryptococcus neoformans var. neofo... 108 2e-22
AJ508671_1(AJ508671|pid:none) Ciona intestinalis mRNA for Rac4 p... 108 2e-22
AY865564_1(AY865564|pid:none) Danio rerio ras-like protein Rhoua... 108 2e-22
AE017348_380(AE017348|pid:none) Cryptococcus neoformans var. neo... 107 4e-22
DQ863325_1(DQ863325|pid:none) Penicillium marneffei CDC42-like p... 107 4e-22
BT047694_1(BT047694|pid:none) Salmo salar clone ssal-evd-544-141... 79 4e-22
BC044508_1(BC044508|pid:none) Danio rerio ras homolog gene famil... 107 5e-22
AY865562_1(AY865562|pid:none) Danio rerio ras-like protein Rhogb... 107 5e-22
AY457922_1(AY457922|pid:none) Brugia malayi ras gene, partial cds. 107 6e-22
CS026757_1(CS026757|pid:none) Sequence 309 from Patent WO2005014... 71 8e-22
AY622688_1(AY622688|pid:none) Marsupenaeus japonicus Rho (Rho) m... 106 8e-22
FN357616_22(FN357616|pid:none) Schistosoma mansoni genome sequen... 106 8e-22
BC134407_1(BC134407|pid:none) Mus musculus ras homolog gene fami... 106 1e-21
(Q9EQT3) RecName: Full=Rho-related GTP-binding protein RhoU; Alt... 106 1e-21
(P33153) RecName: Full=GTP-binding RHO-like protein; Flags: Prec... 70 1e-21
DQ414553_1(DQ414553|pid:none) Suberites domuncula Rho3 gene, com... 96 1e-21
AB262074_1(AB262074|pid:none) Branchiostoma belcheri Rho mRNA fo... 105 1e-21
AJ290420_1(AJ290420|pid:none) Hordeum vulgare partial mRNA for s... 68 1e-21
BX088560_3(BX088560|pid:none) Zebrafish DNA sequence from clone ... 75 2e-21
AF251701_1(AF251701|pid:none) Homo sapiens GTP-binding protein S... 105 2e-21
AJ719416_1(AJ719416|pid:none) Gallus gallus mRNA for hypothetica... 105 2e-21
AY813060_1(AY813060|pid:none) Schistosoma japonicum SJCHGC01385 ... 104 3e-21
FN314788_1(FN314788|pid:none) Schistosoma japonicum isolate Anhu... 104 3e-21
DQ917639_1(DQ917639|pid:none) Sus scrofa RHOG mRNA, complete cds... 104 4e-21
BT049042_1(BT049042|pid:none) Salmo salar clone ssal-eve-520-128... 104 4e-21
CS026597_1(CS026597|pid:none) Sequence 149 from Patent WO2005014... 103 5e-21
AY865561_1(AY865561|pid:none) Danio rerio ras-like protein Rhoga... 103 7e-21
(P84095) RecName: Full=Rho-related GTP-binding protein RhoG; Fla... 103 9e-21
BC114882_1(BC114882|pid:none) Bos taurus ras homolog gene family... 103 9e-21
L11594_1(L11594|pid:none) Slime mold RacD protein mRNA, complete... 103 9e-21
AY891003_1(AY891003|pid:none) Synthetic construct Homo sapiens c... 103 9e-21
(A5D7J5) RecName: Full=Rho-related GTP-binding protein RhoU; &B... 102 1e-20
AY318776_1(AY318776|pid:none) Trichomonas vaginalis Rac1-related... 102 1e-20
BT075963_1(BT075963|pid:none) Caligus rogercresseyi clone crog-e... 102 1e-20
(Q00246) RecName: Full=GTP-binding protein RHO4; Flags: Precurso... 69 1e-20
FN392321_611(FN392321|pid:none) Pichia pastoris GS115 chromosome... 82 1e-20
D10007_1(D10007|pid:none) Saccharomyces cerevisiae RHO4 gene, co... 69 1e-20
AB028167_1(AB028167|pid:none) Giardia intestinalis GlRacA mRNA f... 102 2e-20
CS026621_1(CS026621|pid:none) Sequence 173 from Patent WO2005014... 102 2e-20
BT080654_1(BT080654|pid:none) Caligus clemensi clone ccle-evs-51... 102 2e-20
GN079543_1(GN079543|pid:none) Sequence 146 from Patent WO2009027... 101 3e-20
GN079539_1(GN079539|pid:none) Sequence 142 from Patent WO2009027... 101 3e-20
DQ991433_1(DQ991433|pid:none) Cryptococcus neoformans var. grubi... 101 3e-20
U79759_1(U79759|pid:none) Gallus gallus GTPase cRhoC (cRhoC) mRN... 100 4e-20
AF498974_1(AF498974|pid:none) Homo sapiens small GTP binding pro... 100 4e-20
(Q9PSX7) RecName: Full=Rho-related GTP-binding protein RhoC; Fla... 100 4e-20
GN079619_1(GN079619|pid:none) Sequence 222 from Patent WO2009027... 100 4e-20
GN079589_1(GN079589|pid:none) Sequence 192 from Patent WO2009027... 100 4e-20
BC067992_1(BC067992|pid:none) Xenopus tropicalis ras homolog gen... 100 6e-20
BC046656_1(BC046656|pid:none) Xenopus laevis similar to plysia r... 100 6e-20
AJ508677_1(AJ508677|pid:none) Ciona intestinalis mRNA for Wrch p... 100 6e-20
AY893819_1(AY893819|pid:none) Synthetic construct Homo sapiens c... 100 8e-20
DQ087398_1(DQ087398|pid:none) Biomphalaria glabrata guanine nucl... 100 8e-20
BC054576_1(BC054576|pid:none) Danio rerio ras homolog gene famil... 100 8e-20
AF098515_1(AF098515|pid:none) Gallus gallus GTP-binding protein ... 100 8e-20
AY891276_1(AY891276|pid:none) Synthetic construct Homo sapiens c... 100 8e-20
AY890987_1(AY890987|pid:none) Synthetic construct Homo sapiens c... 100 8e-20
AM488026_2(AM488026|pid:none) Vitis vinifera contig VV78X209729.... 66 9e-20
(Q24817) RecName: Full=Rho-related protein racD; Flags: Precurso... 100 1e-19
AY007299_1(AY007299|pid:none) Aspergillus fumigatus GTPase Rho3 ... 100 1e-19
AY644386_1(AY644386|pid:none) Oryctolagus cuniculus ras-related ... 100 1e-19
AY865555_1(AY865555|pid:none) Danio rerio ras-like protein Rhoaa... 100 1e-19
AJ508664_1(AJ508664|pid:none) Ciona intestinalis mRNA for RhoA p... 100 1e-19
AE017346_15(AE017346|pid:none) Cryptococcus neoformans var. neof... 99 1e-19
BC044425_1(BC044425|pid:none) Danio rerio ras homolog gene famil... 99 1e-19
AY890985_1(AY890985|pid:none) Synthetic construct Homo sapiens c... 99 2e-19
AL603832_6(AL603832|pid:none) Human DNA sequence from clone RP11... 99 2e-19
(P01122) RecName: Full=Ras-like GTP-binding protein RHO; Flags: ... 99 2e-19
BT077726_1(BT077726|pid:none) Lepeophtheirus salmonis Pacific fo... 99 2e-19
BC166849_1(BC166849|pid:none) Rattus norvegicus ras homolog gene... 99 2e-19
(P08134) RecName: Full=Rho-related GTP-binding protein RhoC; Alt... 99 2e-19
AJ297732_1(AJ297732|pid:none) Ciona intestinalis mRNA for ras-li... 99 2e-19
AY223321_1(AY223321|pid:none) Schistosoma japonicum clone ZZD643... 99 2e-19
(Q9P8V0) RecName: Full=GTP-binding protein RHO4; Flags: Precurso... 62 3e-19
GN079535_1(GN079535|pid:none) Sequence 138 from Patent WO2009027... 98 3e-19
BT046992_1(BT046992|pid:none) Salmo salar clone ssal-rgb2-514-26... 98 3e-19
BT075679_1(BT075679|pid:none) Osmerus mordax clone omor-eva-505-... 98 3e-19
(Q9GPS3) RecName: Full=Rho-related protein racF2; Flags: Precurs... 98 3e-19
AC115584_17(AC115584|pid:none) Dictyostelium discoideum chromoso... 98 3e-19
CR857377_1(CR857377|pid:none) Pongo abelii mRNA; cDNA DKFZp469A0... 98 4e-19
BC152258_1(BC152258|pid:none) Danio rerio ras homolog gene famil... 98 4e-19
AF014371_1(AF014371|pid:none) Mus musculus Rho family GTPase (Ar... 98 4e-19
AY865558_1(AY865558|pid:none) Danio rerio ras-like protein Rhoae... 98 4e-19
PDBF(1A2B) MOL_ID: 1; MOLECULE: TRANSFORMING PROTEIN RHOA; CHAIN... 98 4e-19
EF043870_1(EF043870|pid:none) Synthetic construct clone ATCC 103... 98 4e-19
AY893374_1(AY893374|pid:none) Synthetic construct Homo sapiens c... 98 4e-19
AY865556_1(AY865556|pid:none) Danio rerio ras-like protein Rhoab... 98 4e-19
D84477_1(D84477|pid:none) Rattus norvegicus mRNA for RhoA, parti... 98 4e-19
BC075938_1(BC075938|pid:none) Danio rerio ras homolog gene famil... 98 4e-19
AB074297_1(AB074297|pid:none) Synthetic construct gene for Raich... 98 4e-19
AK165512_1(AK165512|pid:none) Mus musculus adult male kidney cDN... 98 4e-19
AY890988_1(AY890988|pid:none) Synthetic construct Homo sapiens c... 98 4e-19
BC053200_1(BC053200|pid:none) Danio rerio ras homolog gene famil... 98 4e-19
AL954868_1(AL954868|pid:none) Zebrafish DNA sequence from clone ... 97 5e-19
BC091269_1(BC091269|pid:none) Rattus norvegicus ras homolog gene... 73 6e-19
BC110757_1(BC110757|pid:none) Xenopus laevis hypothetical protei... 97 6e-19
AY865570_1(AY865570|pid:none) Danio rerio ras-like protein Rac3 ... 97 6e-19
AY892935_1(AY892935|pid:none) Synthetic construct Homo sapiens c... 72 8e-19
AK167917_1(AK167917|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 97 8e-19
(P24406) RecName: Full=Transforming protein RhoA; AltName: Full=... 97 8e-19
BC165903_1(BC165903|pid:none) Danio rerio ras homolog gene famil... 97 8e-19
BT078389_1(BT078389|pid:none) Lepeophtheirus salmonis Pacific fo... 97 8e-19
BT049636_1(BT049636|pid:none) Salmo salar clone ssal-eve-557-248... 97 8e-19
GN103298_1(GN103298|pid:none) Sequence 8079 from Patent WO200903... 96 1e-18
AY815961_1(AY815961|pid:none) Schistosoma japonicum SJCHGC06334 ... 96 1e-18
BT045463_1(BT045463|pid:none) Salmo salar clone ssal-rgf-522-095... 96 1e-18
(O96390) RecName: Full=Rho-related protein racF1; Flags: Precurs... 96 1e-18
AJ508674_1(AJ508674|pid:none) Ciona intestinalis mRNA for Rcl2 p... 96 1e-18
CU928170_237(CU928170|pid:none) Kluyveromyces thermotolerans str... 59 1e-18
(Q9D3G9) RecName: Full=Rho-related GTP-binding protein RhoH; Fla... 72 1e-18
AK169618_1(AK169618|pid:none) Mus musculus 2 days neonate thymus... 72 1e-18
AF151015_1(AF151015|pid:none) Xenopus laevis small Rho-like GTPa... 96 1e-18
BT043687_1(BT043687|pid:none) Salmo salar clone HM5_1941 ras hom... 96 2e-18
DQ414555_1(DQ414555|pid:none) Suberites domuncula Rho1 gene, com... 96 2e-18
FN320133_1(FN320133|pid:none) Schistosoma japonicum isolate Anhu... 96 2e-18
FN392319_112(FN392319|pid:none) Pichia pastoris GS115 chromosome... 95 2e-18
AY644387_1(AY644387|pid:none) Oryctolagus cuniculus small GTP-bi... 95 2e-18
CP000496_312(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 95 2e-18
EU626206_1(EU626206|pid:none) Ovis aries RhoH mRNA, complete cds. 70 4e-18
BT048099_1(BT048099|pid:none) Salmo salar clone ssal-evd-530-096... 94 4e-18
BC122391_1(BC122391|pid:none) Danio rerio zgc:153713, mRNA (cDNA... 94 4e-18
DQ225184_1(DQ225184|pid:none) Lytechinus variegatus Ras homology... 94 4e-18
(O42825) RecName: Full=GTP-binding protein RHO1; Flags: Precurso... 94 4e-18
AB017703_1(AB017703|pid:none) Hemicentrotus pulcherrimus gene fo... 94 5e-18
CP000497_68(CP000497|pid:none) Pichia stipitis CBS 6054 chromoso... 94 7e-18
Z14126_1(Z14126|pid:none) S.cerevisiae RNC1 gene for RhoNUC prot... 60 8e-18
AY865563_1(AY865563|pid:none) Danio rerio ras-like protein Rhoh ... 69 8e-18
AM920429_193(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 93 9e-18
AM270411_2(AM270411|pid:none) Aspergillus niger contig An18c0190... 92 2e-17
GN080137_1(GN080137|pid:none) Sequence 740 from Patent WO2009027... 92 2e-17
AJ518932_1(AJ518932|pid:none) Hordeum vulgare subsp. vulgare mRN... 92 2e-17
DQ667981_1(DQ667981|pid:none) Gossypium hirsutum small GTPase (R... 92 3e-17
DQ905959_1(DQ905959|pid:none) Petunia inflata GTP-binding Rop/Ra... 91 4e-17
GN079679_1(GN079679|pid:none) Sequence 282 from Patent WO2009027... 91 5e-17
CR382124_340(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 91 5e-17
(Q6Z808) RecName: Full=Rac-like GTP-binding protein 3; AltName: ... 91 5e-17
AL121736_1(AL121736|pid:none) Isoform of human GTP-binding prote... 91 5e-17
FN315262_1(FN315262|pid:none) Schistosoma japonicum isolate Anhu... 91 5e-17
GN080105_1(GN080105|pid:none) Sequence 708 from Patent WO2009027... 91 6e-17
AY814253_1(AY814253|pid:none) Schistosoma japonicum SJCHGC07016 ... 91 6e-17
DQ450841_1(DQ450841|pid:none) Solanum chacoense Rac-like GTP-bin... 91 6e-17
CR382134_495(CR382134|pid:none) Debaryomyces hansenii strain CBS... 91 6e-17
GN079579_1(GN079579|pid:none) Sequence 182 from Patent WO2009027... 90 8e-17
(Q24816) RecName: Full=Rho-related protein racC; Flags: Precurso... 90 8e-17
AY884607_1(AY884607|pid:none) Fusarium oxysporum small GTPase-bi... 90 8e-17
AF395859_1(AF395859|pid:none) Blumeria graminis GTPase rho1 (rho... 90 1e-16
(Q67VP4) RecName: Full=Rac-like GTP-binding protein 4; AltName: ... 90 1e-16
AE014298_1465(AE014298|pid:none) Drosophila melanogaster chromos... 66 1e-16
BT022972_1(BT022972|pid:none) Drosophila melanogaster IP04209 fu... 66 1e-16
BC070797_1(BC070797|pid:none) Xenopus laevis hypothetical protei... 89 1e-16
BC068920_1(BC068920|pid:none) Xenopus laevis hypothetical protei... 89 1e-16
BC075375_1(BC075375|pid:none) Xenopus tropicalis Rho family GTPa... 89 1e-16
GN080097_1(GN080097|pid:none) Sequence 700 from Patent WO2009027... 89 1e-16
AY893580_1(AY893580|pid:none) Synthetic construct Homo sapiens c... 89 1e-16
(P92978) RecName: Full=Rac-like GTP-binding protein ARAC11; AltN... 89 1e-16
AJ439335_1(AJ439335|pid:none) Hordeum vulgare mRNA for putative ... 89 1e-16
CS026483_1(CS026483|pid:none) Sequence 35 from Patent WO20050148... 89 2e-16
DQ257288_1(DQ257288|pid:none) Capsicum annuum Rho mRNA, complete... 89 2e-16
CS026489_1(CS026489|pid:none) Sequence 41 from Patent WO20050148... 89 2e-16
(Q54YY4) RecName: Full=Rho-related protein racN; Flags: Precursor; 75 2e-16
AY891433_1(AY891433|pid:none) Synthetic construct Homo sapiens c... 89 2e-16
AJ966571_1(AJ966571|pid:none) Medicago sativa subsp. x varia mRN... 89 2e-16
(P61587) RecName: Full=Rho-related GTP-binding protein RhoE; Alt... 89 2e-16
DQ893847_1(DQ893847|pid:none) Synthetic construct Homo sapiens c... 89 2e-16
GN079457_1(GN079457|pid:none) Sequence 60 from Patent WO20090275... 89 2e-16
AK313224_1(AK313224|pid:none) Homo sapiens cDNA, FLJ93726, highl... 89 2e-16
BC080967_1(BC080967|pid:none) Xenopus tropicalis Rho family GTPa... 89 2e-16
(O77683) RecName: Full=Rho-related GTP-binding protein RhoE; Alt... 89 2e-16
GN080065_1(GN080065|pid:none) Sequence 668 from Patent WO2009027... 89 2e-16
AF126054_1(AF126054|pid:none) Zea mays Rop3 small GTP binding pr... 88 3e-16
AB086182_1(AB086182|pid:none) Zinnia elegans ZeRac2 mRNA for Rac... 88 3e-16
(Q38919) RecName: Full=Rac-like GTP-binding protein ARAC4; AltNa... 88 3e-16
FJ618515_1(FJ618515|pid:none) Eriobotrya japonica ROP2 mRNA, par... 88 3e-16
CS559854_1(CS559854|pid:none) Sequence 441 from Patent WO2006032... 88 3e-16
T23280(T23280)hypothetical protein K03D3.7 - Caenorhabditis eleg... 88 3e-16
AJ784433_1(AJ784433|pid:none) Suberites domuncula mRNA for small... 88 3e-16
AY029330_1(AY029330|pid:none) Nicotiana tabacum Rac-like GTPase ... 88 3e-16
CS559938_1(CS559938|pid:none) Sequence 525 from Patent WO2006032... 88 3e-16
GN079451_1(GN079451|pid:none) Sequence 54 from Patent WO20090275... 88 3e-16
CS026463_1(CS026463|pid:none) Sequence 15 from Patent WO20050148... 88 3e-16
AJ222545_1(AJ222545|pid:none) Nicotiana tabacum mRNA for Rop sub... 88 3e-16
GN079463_1(GN079463|pid:none) Sequence 66 from Patent WO20090275... 88 3e-16
FN318197_1(FN318197|pid:none) Schistosoma japonicum isolate Anhu... 69 3e-16
AJ966572_1(AJ966572|pid:none) Medicago sativa subsp. x varia mRN... 88 4e-16
CU638744_37(CU638744|pid:none) Podospora anserina genomic DNA ch... 88 4e-16
(Q35638) RecName: Full=Rac-like GTP-binding protein RHO1; AltNam... 88 4e-16
BT051480_1(BT051480|pid:none) Medicago truncatula clone MTYF1_F2... 88 4e-16
GN080027_1(GN080027|pid:none) Sequence 630 from Patent WO2009027... 88 4e-16
AF498359_1(AF498359|pid:none) Medicago truncatula small G-protei... 88 4e-16
AF126052_1(AF126052|pid:none) Zea mays Rop1 small GTP binding pr... 88 4e-16
CS559768_1(CS559768|pid:none) Sequence 355 from Patent WO2006032... 88 4e-16
CS560168_1(CS560168|pid:none) Sequence 755 from Patent WO2006032... 88 4e-16
AM488526_4(AM488526|pid:none) Vitis vinifera contig VV78X117969.... 88 4e-16
(Q9GPR2) RecName: Full=Rho-related protein racI; Flags: Precurso... 88 4e-16
GN080069_1(GN080069|pid:none) Sequence 672 from Patent WO2009027... 87 5e-16
AB035355_1(AB035355|pid:none) Drosophila melanogaster mRNA for D... 87 5e-16
AJ251210_1(AJ251210|pid:none) Medicago sativa mRNA for rac G-Pro... 87 7e-16
(Q38937) RecName: Full=Rac-like GTP-binding protein ARAC5; AltNa... 87 7e-16
CR382131_940(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 87 9e-16
AP007166_532(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 87 9e-16
EU970190_1(EU970190|pid:none) Zea mays clone 341857 rac-like GTP... 87 9e-16
(Q9HE04) RecName: Full=GTP-binding protein rho5; Flags: Precurso... 87 9e-16
CU928170_779(CU928170|pid:none) Kluyveromyces thermotolerans str... 87 9e-16
GN080023_1(GN080023|pid:none) Sequence 626 from Patent WO2009027... 86 1e-15
CS026477_1(CS026477|pid:none) Sequence 29 from Patent WO20050148... 86 1e-15
AP007155_66(AP007155|pid:none) Aspergillus oryzae RIB40 genomic ... 86 1e-15
FJ618513_1(FJ618513|pid:none) Eriobotrya japonica ROP1.1 mRNA, p... 86 1e-15
CS026603_1(CS026603|pid:none) Sequence 155 from Patent WO2005014... 86 1e-15
AM433118_4(AM433118|pid:none) Vitis vinifera contig VV78X112443.... 86 1e-15
GN080051_1(GN080051|pid:none) Sequence 654 from Patent WO2009027... 86 1e-15
CS559754_1(CS559754|pid:none) Sequence 341 from Patent WO2006032... 86 1e-15
(O82481) RecName: Full=Rac-like GTP-binding protein ARAC10; AltN... 86 1e-15
EF144250_1(EF144250|pid:none) Populus trichocarpa clone PX0011_N... 86 1e-15
BT058531_1(BT058531|pid:none) Salmo salar clone Contig1658 Rho-r... 54 1e-15
(P22122) RecName: Full=Ras-like GTP-binding protein O-RHO; Flags... 86 1e-15
(Q9HF54) RecName: Full=GTP-binding protein RHO1; Flags: Precurso... 86 1e-15
AY168617_1(AY168617|pid:none) Brassica napus putative ROP family... 86 1e-15
CS560334_1(CS560334|pid:none) Sequence 921 from Patent WO2006032... 86 1e-15
GN079663_1(GN079663|pid:none) Sequence 266 from Patent WO2009027... 86 1e-15
GN079997_1(GN079997|pid:none) Sequence 600 from Patent WO2009027... 86 1e-15
GN079471_1(GN079471|pid:none) Sequence 74 from Patent WO20090275... 86 1e-15
GN079557_1(GN079557|pid:none) Sequence 160 from Patent WO2009027... 86 2e-15
GN079453_1(GN079453|pid:none) Sequence 56 from Patent WO20090275... 86 2e-15
CR382130_43(CR382130|pid:none) Yarrowia lipolytica strain CLIB12... 86 2e-15
CS560208_1(CS560208|pid:none) Sequence 795 from Patent WO2006032... 85 3e-15
AF031428_1(AF031428|pid:none) Arabidopsis thaliana Rho-like GTP ... 85 3e-15
GN079989_1(GN079989|pid:none) Sequence 592 from Patent WO2009027... 85 3e-15
FJ387001_1(FJ387001|pid:none) Trichoplax adhaerens cell division... 85 3e-15
GN079555_1(GN079555|pid:none) Sequence 158 from Patent WO2009027... 85 3e-15
(Q9SBJ6) RecName: Full=Rac-like GTP-binding protein ARAC6; AltNa... 85 3e-15
GN080039_1(GN080039|pid:none) Sequence 642 from Patent WO2009027... 85 3e-15
AF376054_1(AF376054|pid:none) Zea mays putative Rop family GTPas... 85 3e-15
AK175214_1(AK175214|pid:none) Arabidopsis thaliana mRNA for Arac... 85 3e-15
AJ496229_1(AJ496229|pid:none) Nicotiana tabacum partial mRNA for... 85 3e-15
GN080013_1(GN080013|pid:none) Sequence 616 from Patent WO2009027... 85 3e-15
AK011045_1(AK011045|pid:none) Mus musculus 13 days embryo liver ... 65 3e-15
AF379682_1(AF379682|pid:none) Aspergillus nidulans Rho3 GTPase (... 85 3e-15
AY168615_1(AY168615|pid:none) Brassica napus putative ROP family... 85 3e-15
AK081613_1(AK081613|pid:none) Mus musculus 16 days embryo head c... 85 3e-15
AY168618_1(AY168618|pid:none) Brassica napus putative ROP family... 85 3e-15
(Q96WY0) RecName: Full=GTP-binding protein rhoC; AltName: Full=R... 85 3e-15
AL021475_6(AL021475|pid:none) Caenorhabditis elegans YAC Y32F6B,... 60 3e-15
AY168614_1(AY168614|pid:none) Brassica napus putative ROP family... 84 4e-15
EZ000160_1(EZ000160|pid:none) TSA: Schistosoma japonicum SJCHGC0... 84 6e-15
(Q8J212) RecName: Full=GTP-binding protein Rho1; Flags: Precurso... 84 6e-15
AY007297_1(AY007297|pid:none) Aspergillus fumigatus GTPase Rho1 ... 84 7e-15
(P06780) RecName: Full=GTP-binding protein RHO1; AltName: Full=R... 84 7e-15
AK341129_1(AK341129|pid:none) Acyrthosiphon pisum ACYPI005996 mR... 84 7e-15
U64920_1(U64920|pid:none) Arabidopsis thaliana geranylgeranylate... 84 7e-15
AY168613_1(AY168613|pid:none) Brassica napus putative ROP family... 83 1e-14
AX717078_1(AX717078|pid:none) Sequence 69 from Patent WO03020939... 83 1e-14
CU928166_288(CU928166|pid:none) Kluyveromyces thermotolerans str... 83 1e-14
AM920436_303(AM920436|pid:none) Penicillium chrysogenum Wisconsi... 83 1e-14
BC059452_1(BC059452|pid:none) Danio rerio Rho family GTPase 3a, ... 83 1e-14
DQ097179_1(DQ097179|pid:none) Eremothecium sinecaudum RhoH (RHOH... 83 1e-14
CU928170_778(CU928170|pid:none) Kluyveromyces thermotolerans str... 83 1e-14
AY809042_1(AY809042|pid:none) Schistosoma japonicum SJCHGC09571 ... 67 2e-14
AE016815_395(AE016815|pid:none) Ashbya gossypii (= Eremothecium ... 82 2e-14
BT059585_1(BT059585|pid:none) Salmo salar clone ssal-rgf-516-299... 82 2e-14
AC122722_29(AC122722|pid:none) Medicago truncatula clone mth1-3f... 82 2e-14
AE016815_72(AE016815|pid:none) Ashbya gossypii (= Eremothecium g... 82 2e-14
GN079641_1(GN079641|pid:none) Sequence 244 from Patent WO2009027... 82 2e-14

>CR382128_622(CR382128|pid:none) Yarrowia lipolytica strain CLIB122
chromosome B complete sequence.
Length = 191

Score = 121 bits (303), Expect(2) = 8e-40
Identities = 54/106 (50%), Positives = 81/106 (76%)
Frame = +1

Query: 343 LSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPLVLVGTQMDLKSNSVILDRL 522
L YPQTDVFL+CFS+ +P+SF N+ + W E++ +CP P ++VGTQ+DL+S+ +ILD+L
Sbjct: 70 LCYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPGVPCLIVGTQVDLRSDRMILDKL 129

Query: 523 CEKKQLPISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAIDA 660
K P++T+QG +L++++ A +VECSALTQK L VF++AI A
Sbjct: 130 SRHKLRPMTTEQGYQLARELGAVKYVECSALTQKGLKDVFDEAIVA 175

Score = 66.6 bits (161), Expect(2) = 8e-40
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = +3

Query: 180 KTSMLFSYTSNSISNEYQPTVFDNYSTLLMHNKNPYNLSLWDTAGQEEFSKLR 338
KT +L SYT+N +EY PTVFDNY+ +M PY L L+DTAGQE++ +LR
Sbjct: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLR 68

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,100,271,733
Number of extensions: 21433906
Number of successful extensions: 52370
Number of sequences better than 10.0: 1931
Number of HSP's gapped: 51795
Number of HSP's successfully gapped: 3105
Length of query: 276
Length of database: 1,061,185,681
Length adjustment: 127
Effective length of query: 149
Effective length of database: 646,092,785
Effective search space: 96267824965
Effective search space used: 96267824965
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.98 gvh: 0.67 alm: 0.45 top: 0.27 tms: 0.00 mit: 0.30 mip: 0.02
nuc: 2.75 erl: 0.00 erm: 1.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

64.0 %: nuclear
24.0 %: cytoplasmic
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: plasma membrane

>> prediction for Contig-U04314-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 11
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0