Contig-U04229-1
Contig ID Contig-U04229-1
Contig update 2002. 9.13
Contig sequence
>Contig-U04229-1 (Contig-U04229-1Q) /CSM_Contig/Contig-U04229-1Q.Seq.d
AACCACAAATACAACCACAAATACAAACACAAACACAGCCAATTGTTAAT
AGTAACAGGTATCCAATGGGATTTTCAGGTTTTAATAATTCAGCAGCAAC
AACAACAACAACGACGACAAAATCAGCAACAACTAATGTTACTACTCAAA
ATAATAATAAAAAAACACCACCTGTATTCCCTTCCAATATAGTGAATAAT
AATAGTAATGGTAATAATAACAGTTTTAATGATAATACACTCACTTTTTC
AAACGTAAATAATGGTACAGGTACTATGCTACCACCTAAAGCAGATATAT
ATAGCAATCCTTTTTTAACAGAGTCAACATCGAAAGCAACAACCTCGACA
TCCATATCGACTTCGACAATATCATCGACTACAGCAACAGCAACAGCAAC
AGCCACTAATACAACATCGACAACAATATCTTCAAATATTGATTTAAAAA
AAATAAAAAAA

Gap no gap
Contig length 461
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 461872
End point 462335
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U04229
List of clone(s)

est1=SLI653Z,1,462
Translated Amino Acid sequence
PQIQPQIQTQTQPIVNSNRYPMGFSGFNNSAATTTTTTTKSATTNVTTQNNNKKTPPVFP
SNIVNNNSNGNNNSFNDNTLTFSNVNNGTGTMLPPKADIYSNPFLTESTSKATTSTSIST
STISSTTATATATATNTTSTTISSNIDLKKIKK


Translated Amino Acid sequence (All Frames)
Frame A:
nhkynhkykhkhsqllivtgiqwdfqvliiqqqqqqqrrqnqqqlmlllkiiikkhhlys
lpi**iiivmviitvlmiihslfqt*imvqvlcyhlkqiyiailf*qsqhrkqqprhpyr
lrqyhrlqqqqqqqpliqhrqqylqili*kk*k


Frame B:
ttntttntntntanc***qvsngifrf**fssnnnnnddkisnn*cyysk***knttcip
fqyse****w***qf***ythffkrk*wyryyatt*sryi*qsffnrvniesnnldihid
fdniidysnsnsnsh*ynidnnifky*fkknkk


Frame C:
PQIQPQIQTQTQPIVNSNRYPMGFSGFNNSAATTTTTTTKSATTNVTTQNNNKKTPPVFP
SNIVNNNSNGNNNSFNDNTLTFSNVNNGTGTMLPPKADIYSNPFLTESTSKATTSTSIST
STISSTTATATATATNTTSTTISSNIDLKKIKK


own update 2004. 6. 9
Homology vs CSM-cDNA
Query= Contig-U04229-1 (Contig-U04229-1Q)
/CSM_Contig/Contig-U04229-1Q.Seq.d
(461 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U04229-1 (Contig-U04229-1Q) /CSM_Contig/Conti... 841 0.0
Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Conti... 52 5e-07
Contig-U06781-1 (Contig-U06781-1Q) /CSM_Contig/Conti... 52 5e-07
Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Conti... 50 2e-06
Contig-U11475-1 (Contig-U11475-1Q) /CSM_Contig/Conti... 50 2e-06
Contig-U14675-1 (Contig-U14675-1Q) /CSM_Contig/Conti... 48 8e-06
Contig-U06712-1 (Contig-U06712-1Q) /CSM_Contig/Conti... 48 8e-06
Contig-U12496-1 (Contig-U12496-1Q) /CSM_Contig/Conti... 46 3e-05
Contig-U12080-1 (Contig-U12080-1Q) /CSM_Contig/Conti... 46 3e-05
Contig-U11450-1 (Contig-U11450-1Q) /CSM_Contig/Conti... 46 3e-05

>Contig-U04229-1 (Contig-U04229-1Q) /CSM_Contig/Contig-U04229-1Q.Seq.d
Length = 461

Score = 841 bits (424), Expect = 0.0
Identities = 438/445 (98%)
Strand = Plus / Plus


Query: 1 aaccacaaatacaaccacaaatacaaacacaaacacagccaattgttaatagtaacaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaccacaaatacaaccacaaatacaaacacaaacacagccaattgttaatagtaacaggt 60


Query: 61 atccaatgggattttcaggttttaataattcagcagcaacaacaacaacaacgacgacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atccaatgggattttcaggttttaataattcagcagcaacaacaacaacaacgacgacaa 120


Query: 121 aatcagcaacaactaatgttactactcaaaataataatnnnnnnncaccacctgtattcc 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 aatcagcaacaactaatgttactactcaaaataataataaaaaaacaccacctgtattcc 180


Query: 181 cttccaatatagtgaataataatagtaatggtaataataacagttttaatgataatacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttccaatatagtgaataataatagtaatggtaataataacagttttaatgataatacac 240


Query: 241 tcactttttcaaacgtaaataatggtacaggtactatgctaccacctaaagcagatatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcactttttcaaacgtaaataatggtacaggtactatgctaccacctaaagcagatatat 300


Query: 301 atagcaatccttttttaacagagtcaacatcgaaagcaacaacctcgacatccatatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagcaatccttttttaacagagtcaacatcgaaagcaacaacctcgacatccatatcga 360


Query: 361 cttcgacaatatcatcgactacagcaacagcaacagcaacagccactaatacaacatcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttcgacaatatcatcgactacagcaacagcaacagcaacagccactaatacaacatcga 420


Query: 421 caacaatatcttcaaatattgattt 445
|||||||||||||||||||||||||
Sbjct: 421 caacaatatcttcaaatattgattt 445


>Contig-U12755-1 (Contig-U12755-1Q) /CSM_Contig/Contig-U12755-1Q.Seq.d
Length = 987

Score = 52.0 bits (26), Expect = 5e-07
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 87 aattcagcagcaacaacaacaacaac 112
||||||||||||||||||||||||||
Sbjct: 560 aattcagcagcaacaacaacaacaac 585


Score = 44.1 bits (22), Expect = 1e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 91 cagcagcaacaacaacaacaac 112
||||||||||||||||||||||
Sbjct: 390 cagcagcaacaacaacaacaac 411


Score = 36.2 bits (18), Expect = 0.032
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaacgacgacaaaa 122
|||||||||||||||| || ||||||
Sbjct: 432 caacaacaacaacaacaacaacaaaa 457


Score = 36.2 bits (18), Expect = 0.032
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 91 cagcagcaacaacaacaacaac 112
||||| ||||||||||||||||
Sbjct: 393 cagcaacaacaacaacaacaac 414


Score = 36.2 bits (18), Expect = 0.032
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 91 cagcagcaacaacaacaacaac 112
||||| ||||||||||||||||
Sbjct: 567 cagcaacaacaacaacaacaac 588


Score = 32.2 bits (16), Expect = 0.50
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaac 112
||||||||||||||||
Sbjct: 576 caacaacaacaacaac 591


Score = 32.2 bits (16), Expect = 0.50
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaac 112
||||||||||||||||
Sbjct: 408 caacaacaacaacaac 423


Score = 32.2 bits (16), Expect = 0.50
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaac 112
||||||||||||||||
Sbjct: 405 caacaacaacaacaac 420


Score = 32.2 bits (16), Expect = 0.50
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaac 112
||||||||||||||||
Sbjct: 402 caacaacaacaacaac 417


Score = 32.2 bits (16), Expect = 0.50
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaac 112
||||||||||||||||
Sbjct: 579 caacaacaacaacaac 594


Score = 30.2 bits (15), Expect = 2.0
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaacaa 111
|||||||||||||||
Sbjct: 411 caacaacaacaacaa 425


Score = 28.2 bits (14), Expect = 7.8
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 97 caacaacaacaaca 110
||||||||||||||
Sbjct: 582 caacaacaacaaca 595


>Contig-U06781-1 (Contig-U06781-1Q) /CSM_Contig/Contig-U06781-1Q.Seq.d
Length = 690

Score = 52.0 bits (26), Expect = 5e-07
Identities = 26/26 (100%)
Strand = Plus / Plus


Query: 195 aataataatagtaatggtaataataa 220
||||||||||||||||||||||||||
Sbjct: 236 aataataatagtaatggtaataataa 261


Score = 32.2 bits (16), Expect = 0.50
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 205 gtaatggtaataataa 220
||||||||||||||||
Sbjct: 453 gtaatggtaataataa 468


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,370
Number of Sequences: 6905
Number of extensions: 18370
Number of successful extensions: 7877
Number of sequences better than 10.0: 1432
length of query: 461
length of database: 5,674,871
effective HSP length: 16
effective length of query: 445
effective length of database: 5,564,391
effective search space: 2476153995
effective search space used: 2476153995
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 6.14
Homology vs DNA
Query= Contig-U04229-1 (Contig-U04229-1Q) /CSM_Contig/Contig-U04229-1Q.Seq.d
(461 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU053437) Dictyostelium discoideum slug cDNA, clone SLI653. 412 0.0 3
(CN246924) EST012810 Mycelium and yeast cells from Paracocci... 54 4e-10 2
(DH484932) Monosiga ovata DNA, fosmid clone: MOF-041A14, gen... 52 1e-08 2
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 48 1e-08 4
(AJ005583) Crypthecodinium cohnii partial mRNA for p80 protein. 52 5e-08 2
(AL398932) T3 end of clone AS0AA012A12 of library AS0AA from... 48 7e-08 2
(AQ935224) CpG2216B CpIOWAgDNA1 Cryptosporidium parvum genom... 46 7e-08 3
(AY333070) Drosophila virilis antennapedia (Antp), CG10013 (... 56 7e-08 2
(ET556329) fcg3x.232050d21 C. graminicola genomic sequence G... 46 9e-08 2
(AL399376) T3 end of clone AS0AA014G04 of library AS0AA from... 44 1e-07 3
(EB331732) CNSN01-F-137260-501 Normalized CNS library (juven... 50 1e-07 2
(DQ120973) Hucho taimen clone ZB-28 microsatellite sequence. 50 1e-07 2
(DX650325) 1942229 VV02 Ustilago maydis genomic clone 785864... 46 1e-07 2
(CF569196) EST057 Subtracted, Clontech (cat. # K1804-1) Trit... 46 2e-07 2
(DX757537) 2441367 VV03 Ustilago maydis genomic clone 104461... 46 2e-07 2
(EB613876) AGENCOURT_56979076 D. grimshawi EST Drosophila gr... 58 2e-07 2
(AL407234) T7 end of clone XAU0AA002B03 of library XAU0AA fr... 46 3e-07 2
(GH727997) G608.114K12F010911 G608 Triticum aestivum cDNA cl... 46 4e-07 2
(AR558853) Sequence 13984 from patent US 6747137. 46 4e-07 3
(BG520889) ps53f07.y1 Trichinella spiralis ML CMVsport jasme... 46 5e-07 2
(AE012479) Xanthomonas campestris pv. campestris str. ATCC 3... 48 6e-07 2
(ES566200) TPAF-aaa26g07.g1 T.spiralis_EST Trichinella spira... 46 7e-07 2
(BJ271894) Triticum aestivum cDNA clone:whoh2a18, 3' end, si... 46 7e-07 2
(EX851550) CBNC9083.rev CBNC Phycomyces blakesleeanus NRRL15... 46 7e-07 2
(AG545713) Mus musculus molossinus DNA, clone:MSMg01-460F07.... 46 7e-07 2
(BM577862) 17000687164093 A.Gam.ad.cDNA.blood1 Anopheles gam... 46 7e-07 2
(EI025946) bb76f06.r Dekkera bruxellensis Random Genomic Lib... 46 8e-07 2
(BV693761) CqfSI_AAC30 Cronartium nuclear microsatellite seq... 46 8e-07 3
(EY268151) BF01045B2F10.f1 Normalized subtracted keck librar... 56 8e-07 2
(EI016425) bb26f07.r Dekkera bruxellensis Random Genomic Lib... 46 8e-07 2
(ET769618) CHO_OF556xb24f1.ab1 CHO_OF Nicotiana tabacum geno... 46 8e-07 2
(DT761078) EST1194927 Aquilegia cDNA library Aquilegia formo... 46 8e-07 2
(DV607407) EST1210403 Glossina morsitans morsitans Fat body ... 46 9e-07 2
(BJ433666) Dictyostelium discoideum cDNA clone:ddv22g16, 3' ... 46 1e-06 3
(AK078800) Mus musculus 16 days embryo lung cDNA, RIKEN full... 46 2e-06 2
(FM204217) Triticum aestivum GSS, clone RD-7R_E02_A_007.ab1. 46 2e-06 2
(EB065059) TlanSEQ9264 Thermomyces lanuginosa pBluescript (E... 44 2e-06 2
(BF011033) SB239 Sugar Beet germination cDNA library Beta vu... 54 2e-06 2
(EB065027) TlanSEQ9217 Thermomyces lanuginosa pBluescript (E... 44 2e-06 2
(CD920707) G608.118C06F010910 G608 Triticum aestivum cDNA cl... 46 3e-06 2
(BU089549) 1O14 MPIZ-ADIS 006 Lambda Zap II library Beta vul... 54 3e-06 2
(EX652335) 256762121 Pea aphid whole body normalized full le... 46 3e-06 2
(EX651425) 256756265 Pea aphid whole body normalized full le... 46 3e-06 2
(EB049149) OpilSEQ15058 Ophiostoma piliferum pBluescript (Ec... 46 3e-06 2
(EB069203) TlanSEQ18294 Thermomyces lanuginosa pBluescript (... 44 3e-06 2
(AC132738) Rattus norvegicus clone CH230-354G18, WORKING DRA... 50 3e-06 2
(FD738491) WS03944.C21_J02 SS-B-24 Picea sitchensis cDNA clo... 44 3e-06 2
(AC109524) Rattus norvegicus clone CH230-7F10, WORKING DRAFT... 50 3e-06 2
(AC136556) Rattus norvegicus clone CH230-253P17, WORKING DRA... 50 3e-06 2
(EX355462) GQ03117.B7_F13 GQ031 - Xylem Scrapings (Normalize... 50 4e-06 2
(AC171137) Helobdella robusta clone CH306-1A8, complete sequ... 50 4e-06 3
(BI872945) 603398115F1 NIH_MGC_94 Mus musculus cDNA clone IM... 44 4e-06 2
(DL131038) Bax-responsive genes for drug target identificati... 46 5e-06 4
(AX536786) Sequence 387 from Patent WO02064766. 46 5e-06 4
(AR941598) Sequence 387 from patent US 7101990. 46 5e-06 4
(FM992695) Candida dubliniensis CD36 chromosome R, complete ... 50 6e-06 4
(DH506983) Monosiga ovata DNA, fosmid clone: MOF-079B13, gen... 46 7e-06 2
(AY787019) Lessonia nigrescens clone Ln2-H03 SSR marker sequ... 44 8e-06 3
(DL436610) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 44 8e-06 2
(DJ303059) Method for identification of useful proteins deri... 44 8e-06 2
(DX762380) 2547910 VV07 Ustilago maydis genomic clone 110812... 52 8e-06 2
(CN583958) USDA-FP_127024 Acyrthosiphon pisum, Pea Aphid Acy... 44 9e-06 2
(CO058624) Lr_PAHCF_50D11_SKplus Earthworm Fluorantene Expos... 60 9e-06 2
(EB057142) StheSEQ2962 Sporotrichum thermophile pBluescript ... 44 9e-06 2
(EY062126) CATF463.fwd CATF Artemisia annua, Tanzanian, from... 46 9e-06 2
(AY148877) Candida albicans EFG1p-dependent transcript 1 pro... 46 9e-06 3
(AC097158) Rattus norvegicus clone CH230-140A18, *** SEQUENC... 48 1e-05 4
(AR550008) Sequence 5139 from patent US 6747137. 44 1e-05 2
(DH559493) Rattus norvegicus DNA, BAC clone: RNB1-070P06, 5'... 44 1e-05 2
(FM203657) Triticum aestivum GSS, clone RD-15R_C08_A_054.ab1. 50 1e-05 2
(DV456862) CV02022B2D01.f2 CV02-normalized library Manihot e... 44 1e-05 2
(GH140742) G994P142FL11.T0 Neurospora crassa cDNA - 1 hour N... 44 1e-05 2
(DW161782) CLVY1377.b1_A10.ab1 CLV(XYZ) lettuce virosa Lactu... 44 1e-05 2
(DQ002756) Aegilops tauschii clone 8-F11 alpha-gliadin stora... 44 1e-05 3
(DW159887) CLVY1199.b1_M11.ab1 CLV(XYZ) lettuce virosa Lactu... 44 1e-05 2
(EY783503) CR05-C1-103-101-H04-CT.F Mandarin leaf, infected ... 46 1e-05 2
(Z73546) S.cerevisiae chromosome XVI reading frame ORF YPL190c. 46 2e-05 4
(DQ129687) Candida albicans Swi/Snf core member protein (SNF... 44 2e-05 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 46 2e-05 6
(DX690845) 2408649 VV03 Ustilago maydis genomic clone 102557... 46 2e-05 2
(EB741157) MxOs19501D08.g ORESTES cDNA library, Eimeria maxi... 46 2e-05 2
(BF716055) saa13g11.y1 Gm-c1058 Glycine soja cDNA clone GENO... 44 2e-05 2
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 46 2e-05 5
(AE014298) Drosophila melanogaster chromosome X, complete se... 48 2e-05 3
(CD810743) 1496 Lingulodinium polyedrum Lingulodinium polyed... 46 2e-05 2
(AV530124) Arabidopsis thaliana cDNA clone:APZL59e11R, 5' end. 44 2e-05 2
(BJ334521) Dictyostelium discoideum cDNA clone:dda46b21, 5' ... 46 2e-05 2
(ET524963) fcg3x.227050d16 C. graminicola genomic sequence G... 46 2e-05 2
(BJ367985) Dictyostelium discoideum cDNA clone:ddc44g01, 5' ... 46 3e-05 2
(EC834043) TPE00008534 Trimastix pyriformis Non normalized (... 46 3e-05 2
(BZ170805) CH230-247B19.TJ CHORI-230 Segment 2 Rattus norveg... 46 3e-05 2
(BJ364616) Dictyostelium discoideum cDNA clone:ddc32h10, 5' ... 46 3e-05 2
(BZ268820) CH230-327G5.TJ CHORI-230 Segment 2 Rattus norvegi... 46 3e-05 2
(BJ366368) Dictyostelium discoideum cDNA clone:ddc38p17, 5' ... 46 3e-05 2
(BU965513) sat11b01.y1 Gm-c1036 Glycine max cDNA clone SOYBE... 44 3e-05 2
(GH726783) G356.001F22F010705 G356 Triticum aestivum cDNA cl... 46 3e-05 2
(CD909608) G468.113B03F010820 G468 Triticum aestivum cDNA cl... 46 3e-05 2
(AB108211) Phleum pratense DNA, SSR, microsatellite A10-C01. 48 3e-05 2
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 46 3e-05 5
(DW701886) EST025367 Trichophyton rubrum cDNA library 7 Tric... 44 3e-05 2
(AR548024) Sequence 3155 from patent US 6747137. 44 3e-05 2
(ET564726) fcg3x.232450c21 C. graminicola genomic sequence G... 46 4e-05 2
(EK995632) 1095521185344 Global-Ocean-Sampling_GS-33-01-01-1... 38 4e-05 3
(DQ333085) Synthetic construct Saccharomyces cerevisiae clon... 48 4e-05 2
(DX616044) 2293705 VV02 Ustilago maydis genomic clone 941967... 44 4e-05 2
(AF027625) Arabidopsis thaliana ecotype Cen-0 microsatellite... 48 4e-05 2
(EB570927) AGENCOURT_51898807 D. virilis EST Drosophila viri... 44 4e-05 2
(DJ025870) Genome-wide DNA marker of Saccharomyces cerevisiae. 48 4e-05 2
(EC816533) SEE00001498 Seculamonas ecuadoriensis Company (ST... 44 4e-05 2
(DH495084) Monosiga ovata DNA, fosmid clone: MOF-058M11, gen... 46 4e-05 2
(CQ590874) Sequence 18632 from Patent WO0171042. 44 4e-05 3
(EB746728) SPE00002824 Company (LARGE) Spizellomyces punctat... 46 4e-05 2
(EX849768) CBNC8106.rev CBNC Phycomyces blakesleeanus NRRL15... 46 4e-05 2
(U03492) Saccharomyces cerevisiae Scd5p (SCD5) gene, complet... 48 4e-05 2
(EB561177) AGENCOURT_51871291 D. virilis EST Drosophila viri... 48 4e-05 2
(EX810710) CBNA1597.fwd CBNA Phycomyces blakesleeanus NRRL15... 44 4e-05 2
(EX849769) CBNC8106.fwd CBNC Phycomyces blakesleeanus NRRL15... 46 4e-05 2
(FJ390035) Symbiodinium sp. B1 microsatellite GV2_70 sequence. 46 4e-05 2
(AC122574) Rattus norvegicus 7 BAC CH230-134L8 (Children's H... 46 4e-05 2
(BV036574) S212P6452FE7.T0 CZECHII/Ei Mus musculus STS genom... 46 4e-05 2
(CO112379) GR__Eb0049A01.r GR__Eb Gossypium raimondii cDNA c... 46 4e-05 2
(CZ287743) cp54c12.r Candida parapsilosis Random Genomic Lib... 44 4e-05 2
(DY893873) CeleSEQ13327 Cunninghamella elegans pBluescript (... 46 4e-05 2
(AC106411) Rattus norvegicus clone CH230-82H8, *** SEQUENCIN... 46 5e-05 2
(FE770183) CCAG5444.b7 CCAG Petrolisthes cinctipes heart, gi... 38 5e-05 3
(AC096844) Rattus norvegicus clone CH230-1M16, *** SEQUENCIN... 48 5e-05 2
(DY887275) CeleSEQ3213 Cunninghamella elegans pBluescript (E... 46 5e-05 2
(Z75237) S.cerevisiae chromosome XV reading frame ORF YOR329c. 48 5e-05 2
(AC095679) Rattus norvegicus clone CH230-8J23, *** SEQUENCIN... 46 5e-05 2
(EU735052) Gadus morhua microsatellite PGmo105 sequence. 44 6e-05 2
(DT883625) C5F Glomus intraradices Clontech PCR Select cDNA ... 44 6e-05 2
(EU906980) Cynoglossus semilaevis microsatellite Cyse108 seq... 46 6e-05 2
(AY494865) Ceratocystis fimbriata microsatellite CAA-80 sequ... 44 6e-05 2
(AJ012206) Salmo salar DNA for a cryptic repeat. 50 7e-05 2
(DT979113) CLJ180-F11.y1d-s SHGC-CLJ Gasterosteus aculeatus ... 48 7e-05 2
(DT980319) CLJ187-H08.x1d-t SHGC-CLJ Gasterosteus aculeatus ... 48 7e-05 2
(U42227) Saccharomyces cerevisiae replicative mitochondrial ... 48 7e-05 2
(AF483855) Phaseolus vulgaris clone T1 microsatellite sequence. 46 7e-05 2
(AC094507) Rattus norvegicus 1 BAC CH230-4E15 (Children's Ho... 46 7e-05 2
(AL844509) Plasmodium falciparum chromosome 13. 60 8e-05 1
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 60 8e-05 1
(EL494575) D02_PFBAMHI-S-T7-PLATE4A.AB1 Blood stage Plasmodi... 60 8e-05 1
(ED682747) GM_WBb0016H17.r GM_WBb Glycine max genomic clone ... 44 8e-05 2
(EB625074) AGENCOURT_54975599 D. mojavensis EST Drosophila m... 40 8e-05 4
(DQ332596) Synthetic construct Saccharomyces cerevisiae clon... 46 9e-05 2
(AX831554) Sequence 2274 from Patent WO03072602. 46 9e-05 2
(AX820524) Sequence 2274 from Patent EP1338608. 46 9e-05 2
(AX596222) Sequence 1876 from Patent EP1258494. 46 9e-05 2
(EB619471) AGENCOURT_54973825 D. mojavensis EST Drosophila m... 40 9e-05 4
(AM828385) Nicotiana tabacum EST, clone nt002139039. 46 9e-05 2
(BQ622264) fch1c.pk005.j7 Conidiobolus cornatus ARSEF 512 Co... 46 9e-05 2
(CA746092) wri2s.pk003.e7 wri2s Triticum aestivum cDNA clone... 42 9e-05 3
(EB631995) AGENCOURT_55024635 D. mojavensis EST Drosophila m... 40 9e-05 4
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 50 9e-05 4
(EC849211) HAE00002396 Home-made, regular (lib1_ha) Histiona... 42 1e-04 2
(BQ584256) E011860-024-003-L15-SP6 MPIZ-ADIS-024-inflorescen... 44 1e-04 2
(BI316328) saf01h09.y1 Gm-c1065 Glycine max cDNA clone GENOM... 44 1e-04 2
(AM792201) Nicotiana tabacum EST, clone nt002178084. 46 1e-04 2
(DX162109) OR_ABa0016P17.r OR_ABa Oryza ridleyi genomic clon... 44 1e-04 2
(CZ904971) gy39d06.x1.b.screen Bread wheat methylation filte... 40 1e-04 2
(DW011691) w14i15_M13F Myzus persicae, tobacco lineage, whol... 46 1e-04 2
(DL130894) Bax-responsive genes for drug target identificati... 46 1e-04 2
(AX536498) Sequence 99 from Patent WO02064766. 46 1e-04 2
(AR941454) Sequence 99 from patent US 7101990. 46 1e-04 2
(DX768402) 2627250 VV07 Ustilago maydis genomic clone 116102... 46 1e-04 2
(BZ160874) CH230-339G15.TJ CHORI-230 Segment 2 Rattus norveg... 42 1e-04 2
(AC126897) Rattus norvegicus clone CH230-388K23, WORKING DRA... 46 1e-04 2
(DX764008) 2621491 VV07 Ustilago maydis genomic clone 115908... 48 1e-04 3
(DX684623) 2517515 VV03 Ustilago maydis genomic clone 108347... 48 1e-04 3
(AC007975) Drosophila melanogaster, chromosome 3R, region 10... 50 1e-04 3
(AZ650033) 1M0520C01F Mouse 10kb plasmid UUGC1M library Mus ... 46 1e-04 3
(AC023715) Drosophila melanogaster X BAC RP98-17H6 (Roswell ... 46 1e-04 2
(EF059308) Synthetic construct Saccharomyces cerevisiae clon... 46 1e-04 2
(AR778417) Sequence 223 from patent US 6949356. 46 1e-04 2
(DL265081) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 44 1e-04 2
(DJ131530) Method for identification of useful proteins deri... 44 1e-04 2
(DB998946) Quercus mongolica subsp. crispula mRNA, clone: Qm... 42 1e-04 3
(BM308932) sak52d12.y1 Gm-c1036 Glycine max cDNA clone SOYBE... 44 1e-04 2
(AX392369) Sequence 1 from Patent WO0215897. 44 1e-04 2
(EA311449) Sequence 19 from patent US 7291720. 44 1e-04 2
(EA311434) Sequence 1 from patent US 7291720. 44 1e-04 2
(AL806535) Mouse DNA sequence from clone RP23-456J6 on chrom... 46 1e-04 2
(AC023729) Drosophila melanogaster X BAC RP98-39L4 (Roswell ... 46 1e-04 2
(BV075734) S208P6403RC2.T0 129S1/SvImJ Mus musculus STS geno... 42 1e-04 2
(AC007086) Drosophila melanogaster, chromosome 2R, region 45... 46 1e-04 2
(AC023719) Drosophila melanogaster X BAC RP98-4L24 (Roswell ... 46 1e-04 2
(CQ590873) Sequence 18631 from Patent WO0171042. 44 1e-04 3
(BB624565) Mus musculus 16 days embryo lung cDNA, RIKEN full... 46 1e-04 2
(EC815788) SEE00002647 Seculamonas ecuadoriensis Company (ST... 46 1e-04 2
(DH477911) Monosiga ovata DNA, fosmid clone: MOF-028N07, gen... 46 1e-04 2
(FE772930) CCAG6891.b3 CCAG Petrolisthes cinctipes heart, gi... 56 1e-04 2
(EX815422) CBNA4522.rev CBNA Phycomyces blakesleeanus NRRL15... 46 1e-04 2
(FB876876) Sequence 96149 from Patent WO2008034648. 46 1e-04 2
(FB862918) Sequence 82191 from Patent WO2008034648. 46 1e-04 2
(FB841878) Sequence 61151 from Patent WO2008034648. 46 1e-04 2
(ES563863) TPAF-aab23f10.g1 T.spiralis_EST Trichinella spira... 44 1e-04 2
(EC616911) SAAH-aaa30c06.g1 Agen 0058 Schmidtea mediterranea... 44 1e-04 2
(DX769311) 2649340 VV07 Ustilago maydis genomic clone 116808... 42 1e-04 2
(FE788285) CCAG16019.b5 CCAG Petrolisthes cinctipes heart, g... 46 1e-04 2
(CF867232) tric010xg18.b1 T.reesei mycelial culture, Version... 46 2e-04 2
(EB597666) AGENCOURT_54721552 D. grimshawi EST Drosophila gr... 44 2e-04 2
(EB602273) AGENCOURT_54728474 D. mojavensis EST Drosophila m... 42 2e-04 2
(EE671944) SAAH-aab69b10.g1 Agen 0058 Schmidtea mediterranea... 44 2e-04 2
(AF550002) Xenopus laevis clone S10-56-h11 mRNA sequence. 42 2e-04 2
(EH730155) CNMM2415.b1_N03.ab1 CNM(LMS) spotted knapweed Cen... 46 2e-04 2
(DR916216) EST1107755 Aquilegia cDNA library Aquilegia formo... 44 2e-04 2
(AJ620905) Antirrhinum majus mRNA for STYLOSA protein. 46 2e-04 2
(CN587064) USDA-FP_130136 Acyrthosiphon pisum, Pea Aphid Acy... 50 2e-04 2
(ES790917) UFL_556_32 Cotton fiber 0-10 day post anthesis Go... 46 2e-04 2
(EJ201111) 1092344299627 Global-Ocean-Sampling_GS-27-01-01-1... 46 2e-04 2
(CV488078) AGENCOURT_32342308 NIH_ZGC_15 Danio rerio cDNA cl... 44 2e-04 2
(CB897252) tric010xg18 T.reesei mycelial culture, Version 3 ... 46 2e-04 2
(AC116076) Rattus norvegicus clone CH230-61L11, *** SEQUENCI... 46 2e-04 2
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 46 2e-04 3
(DX714942) 2477326 VV03 Ustilago maydis genomic clone 104850... 48 2e-04 3
(AC121387) Rattus norvegicus clone CH230-179E15, WORKING DRA... 46 2e-04 2
(AC084802) Mus musculus strain C57BL6/J chromosome 16 clone ... 46 2e-04 2
(EB598379) AGENCOURT_56968712 D. grimshawi EST Drosophila gr... 44 2e-04 3
(AF277458) Arabidopsis thaliana LEUNIG (LEUNIG) mRNA, comple... 44 2e-04 2
(EY505003) CBBP923.fwd CBBP Hirudo medicinalis hermaphrodite... 42 2e-04 3
(DR921513) EST1113052 Aquilegia cDNA library Aquilegia formo... 48 2e-04 2
(AC097346) Rattus norvegicus clone CH230-34E1, *** SEQUENCIN... 46 2e-04 2
(EY344130) CAWZ12905.fwd CAWZ Helobdella robusta Primary Lat... 34 2e-04 3
(EX433749) GQ03914.B7_D08 GQ039 - Stem - Dormant Picea glauc... 44 2e-04 2
(EU735050) Gadus morhua microsatellite PGmo100 sequence. 44 2e-04 2
(DW482830) GH_RMIRS_038_E05_R Cotton Normalized Library rand... 46 2e-04 2
(DW482829) GH_RMIRS_038_E05_039_F Cotton Normalized Library ... 46 2e-04 2
(DX410531) SOYFS92TV LargeInsertSoybeanGenLibBuild4 Glycine ... 44 2e-04 2
(AJ429164) Polycentropus flavomaculatus microsatellite DNA, ... 44 2e-04 2
(AL422303) T3 end of clone XAY0AA002D09 of library XAY0AA fr... 44 2e-04 2
(DY670951) STRAS74JX cold-stressed Fragaria vesca seedlings ... 42 2e-04 2
(EX166165) G11_P-21_088 Cotton 1-14 day post anthesis Lambda... 46 2e-04 2
(AC098907) Rattus norvegicus clone CH230-174A6, WORKING DRAF... 46 2e-04 2
(AL274114) Tetraodon nigroviridis genome survey sequence PUC... 42 2e-04 2
(EU339083) Secale cereale clone 703_IV-H12 microsatellite se... 46 2e-04 2
(AC110984) Rattus norvegicus clone CH230-199C17, *** SEQUENC... 46 2e-04 2
(DQ120964) Hucho taimen clone ZB-17 microsatellite sequence. 54 2e-04 2
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 46 2e-04 3
(BJ367635) Dictyostelium discoideum cDNA clone:ddc43n09, 5' ... 46 2e-04 2
(CA744716) wri1s.pk009.a11 wri1s Triticum aestivum cDNA clon... 46 3e-04 2
(AC004665) Arabidopsis thaliana chromosome 2 clone F4I18 map... 44 3e-04 2
(AG956293) Drosophila sechellia DNA, clone: DSE1-011F22.R.fa... 44 3e-04 2
(AC144815) Mus musculus BAC clone RP24-289M2 from 12, comple... 58 3e-04 1
(CK895483) SGP158000 Atlantic salmon Swimbladder cDNA librar... 46 3e-04 2
(Z49821) S.cerevisiae PDR10, MYO2, PDR10, SCD5, MIP1, ALA1, ... 48 3e-04 2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 48 3e-04 3
(EF494636) Ustilago maydis alternative cyclin Pcl11 (pcl11) ... 46 3e-04 3
(CU633899) Podospora anserina genomic DNA chromosome 1, supe... 46 3e-04 2
(EF133997) Amphidinium carterae strain CCMP121 isolate Aca-c... 42 4e-04 2
(DE224908) Trifolium pratense DNA, clone:RCG16896. 42 4e-04 2
(CK888010) SGP149211 Atlantic salmon Liver cDNA library Salm... 46 4e-04 2
(EB253577) CNSN01-C-005615-501 Normalized CNS library (juven... 44 4e-04 2
(CR382138) Debaryomyces hansenii strain CBS767 chromosome F ... 46 4e-04 2
(CK896032) SGP158567 Atlantic salmon Swimbladder cDNA librar... 46 4e-04 2
(AG967160) Drosophila simulans DNA, clone: DSM1-003J07.F.fa,... 42 4e-04 2
(DJ025876) Genome-wide DNA marker of Saccharomyces cerevisiae. 46 4e-04 2
(DQ332239) Synthetic construct Saccharomyces cerevisiae clon... 46 4e-04 3
(EA397325) Sequence 46149 from patent US 7314974. 46 4e-04 3
(AR527901) Sequence 204 from patent US 6723837. 46 4e-04 3
(CK896854) SGP159410 Atlantic salmon Swimbladder cDNA librar... 44 4e-04 2
(BP962059) Euphorbia tirucalli mRNA, clone: ETC030H02, 5' end. 38 4e-04 3
(AV834980) Hordeum vulgare subsp. spontaneum cv.H602 cDNA cl... 44 4e-04 2
(CX561068) ydb49g06.y2 Sea urchin EST Lib1 Strongylocentrotu... 44 4e-04 2
(BP962060) Euphorbia tirucalli mRNA, clone: ETC066D04, 5' end. 38 4e-04 3
(U05314) Saccharomyces cerevisiae nuclear polyadenylated RNA... 46 4e-04 3
(DX703854) 2472404 VV03 Ustilago maydis genomic clone 106769... 46 4e-04 2
(DX712533) 2408374 VV03 Ustilago maydis genomic clone 102542... 46 4e-04 3
(DL131178) Bax-responsive genes for drug target identificati... 46 4e-04 2
(AX537066) Sequence 667 from Patent WO02064766. 46 4e-04 2
(AR941738) Sequence 667 from patent US 7101990. 46 4e-04 2
(EG351537) SAAH-aad18d05.g1 Agen 0058 Schmidtea mediterranea... 46 4e-04 2
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 46 4e-04 3
(CO371148) tah70g05.y1 Hydra EST UCI 5 Hydra magnipapillata ... 44 4e-04 2
(CK895185) SGP154437 Atlantic salmon Swimbladder cDNA librar... 44 4e-04 2
(AC132292) Mus musculus BAC clone RP24-319L4 from chromosome... 44 4e-04 2
(EB268305) MCC015-F-019415-501 Non-Normalized MCC Neurons 2 ... 42 4e-04 2
(D37935) Saccharomyces cerevisiae for RNA binding protein, c... 46 4e-04 3
(EH018573) HCM_28_E01 Haploid cells grown in Complete Media ... 46 5e-04 2
(AC116849) Mus musculus chromosome 19, clone RP24-395F1, com... 44 5e-04 2
(DX678756) 2315759 VV03 Ustilago maydis genomic clone 100690... 46 5e-04 3
(EE519412) 36RDBRG_UP_039_E12_24JUN2004_088 Brassica rapa 36... 46 5e-04 2
(BZ298874) CG4631.f1 Candida glabrata Random Genomic Library... 44 5e-04 2
(CK839340) UI-R-BJ1-atw-e-07-0-UI.s10 UI-R-BJ1 Rattus norveg... 44 5e-04 2
(U42218) Trichinalla spiralis MYOD-like DNA-binding protein ... 44 5e-04 2
(AF441536) Pinus taeda PtTX3125 microsatellite sequence. 46 5e-04 2
(ET487784) fcg2x.pk046.f3 C. graminicola genomic sequence Gl... 46 5e-04 2
(EX844859) CBNC5609.fwd CBNC Phycomyces blakesleeanus NRRL15... 42 5e-04 2
(DJ025882) Genome-wide DNA marker of Saccharomyces cerevisiae. 46 5e-04 2
(CK107271) UB51DPH05.5pR Populus active cambium cDNA library... 46 5e-04 2
(FI394943) CH322-117H02.y CHORI-322 Drosophila melanogaster ... 44 5e-04 2
(CF645377) K35_G02 Filamentous Forced Diploid Ustilago maydi... 46 5e-04 2
(DX745448) 2408305 VV03 Ustilago maydis genomic clone 102533... 46 5e-04 2
(EB458178) 1099435196370 12-DrosW-std-1P6Kb Drosophila willi... 44 5e-04 2
(CF643582) K10_C11 Filamentous Forced Diploid Ustilago maydi... 46 5e-04 2
(DH500698) Monosiga ovata DNA, fosmid clone: MOF-068J14, gen... 44 5e-04 2
(FF331337) 280445367 Pea aphid whole body normalized full le... 38 5e-04 3
(EY487296) CBBP15719.fwd CBBP Hirudo medicinalis hermaphrodi... 48 5e-04 2
(EC692440) JLE00004729 Jakoba libera Company (STANDARD) Jako... 42 5e-04 2
(ES851159) UFL_658_07 Cotton fiber 0-10 day post anthesis Go... 44 5e-04 2
(EC816461) SEE00001183 Seculamonas ecuadoriensis Company (ST... 46 6e-04 2
(FF115683) CJAH-aab47d11.b1 Caenorhabditis_japonica_CJAH1_ES... 42 6e-04 2
(FG072520) UI-FF-IF0-aam-e-06-0-UI.r1 Ceratitis capitata emb... 44 6e-04 2
(DH601086) Rattus norvegicus DNA, BAC clone: RNB1-127A02, 3'... 40 6e-04 3
(AJ426419) Lupinus albus mRNA for TCP1 protein. 46 6e-04 2
(CK887535) SGP164401 Atlantic salmon Kidney cDNA library Sal... 44 6e-04 2
(DX635778) 2085023 VV02 Ustilago maydis genomic clone 804676... 48 6e-04 2
(EI022562) bb62g05.f Dekkera bruxellensis Random Genomic Lib... 44 6e-04 2
(DH499428) Monosiga ovata DNA, fosmid clone: MOF-066G13, gen... 44 6e-04 2
(GE908374) 9551023_L14.ab1_c Past_norm2007 Porites astreoide... 46 6e-04 2
(AY842303) Macrobrachium rosenbergii clock mRNA, complete cds. 46 6e-04 2
(DQ121022) Hucho taimen clone ZA-18 microsatellite sequence. 42 6e-04 2
(CV846162) ID0AEE14BC08RM1 ID0AEE Acyrthosiphon pisum cDNA c... 42 6e-04 2
(DN315987) PL06022B1B01 cDNA from juvenile hermaphodites Sch... 46 6e-04 2
(AP006498) Cyanidioschyzon merolae DNA, chromosome 16, compl... 46 6e-04 2
(AC149275) Mus musculus chromosome 7 clone RP24-501K1, WORKI... 44 6e-04 2
(FF296556) 279312481 Pea aphid whole body normalized full le... 42 6e-04 2
(EY354999) CAWZ3569.fwd CAWZ Helobdella robusta Primary Late... 42 6e-04 3
(FL823073) CCGG18764.b1 CCGG Panicum virgatum late flowering... 40 6e-04 2
(FE239015) CAPG5143.fwd CAPG Naegleria gruberi amoeba stage ... 48 6e-04 2
(BH730596) BOHUU35TF BO_2_3_KB Brassica oleracea genomic clo... 44 6e-04 2
(CZ290892) cp72e08.r Candida parapsilosis Random Genomic Lib... 48 6e-04 2
(EX632516) 256569725 Pea aphid whole body normalized full le... 46 6e-04 2
(EY385483) CAXA5714.rev CAXA Helobdella robusta Subtracted L... 44 6e-04 2
(DH491079) Monosiga ovata DNA, fosmid clone: MOF-051I18, gen... 44 6e-04 2
(AC112277) Rattus norvegicus clone CH230-24F23, WORKING DRAF... 46 6e-04 2
(DN309705) PL06005A2H03 cDNA from juvenile hermaphodites Sch... 46 6e-04 2
(FJ477868) Naupactus xanthographus clone H7xan2 microsatelli... 44 6e-04 2
(DH501495) Monosiga ovata DNA, fosmid clone: MOF-070A06, gen... 44 6e-04 2
(EB613310) AGENCOURT_56976888 D. grimshawi EST Drosophila gr... 44 6e-04 2
(DC479090) Monosiga ovata cDNA, clone: MOC-042E15, 5'end. 44 6e-04 2
(DC468974) Monosiga ovata cDNA, clone: MOC-027K02, 5'end. 44 6e-04 2
(EB805398) 3479_L05 Botrytis cinerea expressed sequence tags... 46 6e-04 3
(DC458046) Monosiga ovata cDNA, clone: MOC-011M03, 5'end. 44 6e-04 2
(AC145304) Mus musculus chromosome 19 clone RP23-447N17, ***... 44 6e-04 2
(DV378229) NACNK54TF Aedes aegypti infected with Plasmodium ... 44 6e-04 2
(AC103439) Rattus norvegicus clone CH230-161I2, WORKING DRAF... 50 6e-04 2
(EX815075) CBNA4347.fwd CBNA Phycomyces blakesleeanus NRRL15... 46 6e-04 2
(DC515542) Monosiga ovata cDNA, clone: MOC-094O12, 5'end. 44 6e-04 2
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 46 6e-04 2
(EY500952) CBBP555.fwd CBBP Hirudo medicinalis hermaphrodite... 48 7e-04 2
(AC098991) Rattus norvegicus clone CH230-84N8, WORKING DRAFT... 44 7e-04 3
(DN790320) 90160422 Sea Urchin primary mesenchyme cell cDNA ... 44 7e-04 2
(CO364784) RTK1_21_F08.g1_A029 Roots minus potassium Pinus t... 42 7e-04 2
(AY683356) Drosophila polymorpha S_4M.2 optomotor blind (omb... 46 7e-04 2
(DT221092) JGI_CAAS16713.fwd CAAS Pimephales promelas brain ... 44 7e-04 2
(EY385484) CAXA5714.fwd CAXA Helobdella robusta Subtracted L... 44 7e-04 2
(EL565239) Physarum00540 Physarum polycephalum starvation st... 42 7e-04 2
(EG955002) ANGU6098 Macrostomum lignano Adult LT Library Mac... 44 7e-04 2
(AC129350) Rattus norvegicus clone CH230-334P23, WORKING DRA... 44 7e-04 4
(DQ307243) Penaeus monodon microsatellite 9GG sequence. 46 7e-04 2
(FE242079) CAPG6994.fwd CAPG Naegleria gruberi amoeba stage ... 48 7e-04 2
(EX426477) GQ03813.B7_H02 GQ038 - Stem - Active growth Picea... 46 7e-04 2
(DV619427) EST1222423 Glossina morsitans morsitans Fat body ... 44 7e-04 2
(AL244017) Tetraodon nigroviridis genome survey sequence PUC... 48 7e-04 2
(FE241174) CAPG6555.fwd CAPG Naegleria gruberi amoeba stage ... 48 7e-04 2
(DV378230) NACNK54TO Aedes aegypti infected with Plasmodium ... 44 7e-04 2
(AC115150) Rattus norvegicus clone CH230-101A11, *** SEQUENC... 44 7e-04 2
(EW779926) OoSal353 Asian rice gall midge salivary gland cDN... 42 7e-04 2
(AC155173) Mus musculus BAC clone RP23-72O23 from chromosome... 44 7e-04 3
(EF207638) Excirolana hirsuticauda clone Ehir25 microsatelli... 46 7e-04 2
(AL398203) T7 end of clone AS0AA007F09 of library AS0AA from... 46 7e-04 2
(FD478819) 137E7T71 Ps-n cDNA Library Pseudo-nitzschia multi... 44 7e-04 2
(CV836444) ID0ACC30BD02RM1 ID0ACC Acyrthosiphon pisum cDNA c... 46 7e-04 2
(CK895469) SGP157986 Atlantic salmon Swimbladder cDNA librar... 44 8e-04 2
(AL424701) T7 end of clone XAZ0AA001H09 of library XAZ0AA fr... 44 8e-04 2
(EB455301) 1099341357361 12-DrosW-std-1P6Kb Drosophila willi... 44 8e-04 2
(EX810854) CBNA1675.rev CBNA Phycomyces blakesleeanus NRRL15... 36 8e-04 4
(CK895586) SGP158104 Atlantic salmon Swimbladder cDNA librar... 44 8e-04 2
(DX785053) 2663759 VV07 Ustilago maydis genomic clone 111133... 46 8e-04 2
(EX852969) CBNC9867.fwd CBNC Phycomyces blakesleeanus NRRL15... 46 8e-04 2
(DQ121087) Hucho taimen clone ZA-81 microsatellite sequence. 42 8e-04 2
(CU633901) Podospora anserina genomic DNA chromosome 1, supe... 46 8e-04 2
(DX694778) 2511169 VV03 Ustilago maydis genomic clone 107647... 46 8e-04 2
(AL422490) T3 end of clone AZ0AA001F04 of library AZ0AA from... 54 9e-04 2
(EB741101) AcOs18801E02.g ORESTES cDNA library, Eimeria acer... 44 0.001 2
(AC097172) Rattus norvegicus clone CH230-2G16, *** SEQUENCIN... 42 0.001 3
(CQ606338) Sequence 34096 from Patent WO0171042. 40 0.001 3
(AC023742) Drosophila melanogaster X BAC RP98-43C24 (Roswell... 44 0.001 2
(DR137051) 49193479 Drosophila pseudoobscura embryonic cDNA ... 40 0.001 2
(DL436087) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 40 0.001 2
(DJ302536) Method for identification of useful proteins deri... 40 0.001 2
(AC226608) Zea mays chromosome 1 clone ZMMBBb-108A22; ZMMBBb... 44 0.001 2
(DQ120961) Hucho taimen clone ZB-12 microsatellite sequence. 42 0.001 2
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 46 0.001 3
(AC013069) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 0.001 2
(AC019929) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 46 0.001 3
(FH948000) CHO_OF6747xm22f1.ab1 CHO_OF6 Nicotiana tabacum ge... 44 0.001 2
(AY118542) Drosophila melanogaster LD28384 full insert cDNA. 44 0.001 2
(CP000497) Pichia stipitis CBS 6054 chromosome 3, complete s... 46 0.001 2
(FC699124) CAXX746.fwd CAXX Lottia gigantea from male gonad ... 44 0.001 2
(FC590238) CAXP591.fwd CAXP Lottia gigantea from head, foot,... 44 0.001 2
(FC758678) CBBN10901.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 44 0.001 2
(FC729821) CBBG5620.fwd CBBG Lottia gigantea 12,15,18h embry... 44 0.001 2
(FC768497) CBBN4453.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 44 0.001 2
(FC773089) CBBN7466.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 44 0.001 2
(CK896162) SGP158699 Atlantic salmon Swimbladder cDNA librar... 44 0.001 2
(CA725902) wet1s.pk001.l12 wet1s Triticum aestivum cDNA clon... 52 0.001 2
(EA194649) Sequence 58964 from patent US 7214786. 44 0.001 2
(CA726582) wet1s.pk003.m3 wet1s Triticum aestivum cDNA clone... 50 0.001 2
(CA726519) wet1s.pk003.b22 wet1s Triticum aestivum cDNA clon... 52 0.001 2
(CA725756) wet1s.pk001.e10 wet1s Triticum aestivum cDNA clon... 50 0.001 2
(AR549960) Sequence 5091 from patent US 6747137. 44 0.001 2
(CK896197) SGP158734 Atlantic salmon Swimbladder cDNA librar... 44 0.001 2
(AC159396) Physcomitrella patens clone JGIASYB-5E19, complet... 56 0.001 1
(AC115469) Rattus norvegicus clone CH230-247H17, *** SEQUENC... 56 0.001 1
(AC106651) Rattus norvegicus clone CH230-66P8, *** SEQUENCIN... 56 0.001 1
(FP102563) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 56 0.001 1
(CU896574) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 56 0.001 1
(CU856013) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 56 0.001 1
(AC007415) Drosophila melanogaster strain y chromosome 2 clo... 56 0.001 1
(AK236265) Sus scrofa mRNA, clone:OVRM10170D04, expressed in... 56 0.001 1
(BW962765) Sus scrofa mRNA, clone:LVR010093E05, 5' end, expr... 56 0.001 1
(EY331721) CAWY4369.fwd CAWY Helobdella robusta Subtracted E... 56 0.001 1
(BV693752) CqfSI_AAC02 Cronartium nuclear microsatellite seq... 44 0.001 2
(AL844550) Mouse DNA sequence from clone RP23-277K21 on chro... 50 0.001 2
(CK896320) SGP158862 Atlantic salmon Swimbladder cDNA librar... 44 0.001 2
(EB292124) CNSN01-F-025515-501 Normalized CNS library (juven... 44 0.001 2
(BT058038) Drosophila melanogaster RH73981 full insert cDNA. 40 0.001 3
(DX791115) 2664804 VV07 Ustilago maydis genomic clone 116196... 46 0.001 2
(BM582304) 17000687275687 A.Gam.ad.cDNA.blood1 Anopheles gam... 46 0.001 2
(AM944188) Hevea brasiliensis GSS, clone gHbCIR330. 42 0.001 3
(DR363199) 6635767 CERES-AL46 Arabidopsis thaliana cDNA clon... 42 0.001 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 0.001 2
(AC126933) Mus musculus BAC clone RP24-117M7 from chromosome... 44 0.001 3
(CA037805) ssallna015088 liver Salmo salar cDNA, mRNA sequence. 44 0.001 2
(CU638743) Podospora anserina genomic DNA chromosome 3, supe... 46 0.001 3
(DR363201) 6625209 CERES-AL45 Arabidopsis thaliana cDNA clon... 42 0.001 2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 42 0.001 4
(DX775812) 2608596 VV07 Ustilago maydis genomic clone 111133... 46 0.001 2
(CB509819) ssalnwh505280 whole Salmo salar cDNA, mRNA sequence. 44 0.001 2
(CK889382) SGP161400 Atlantic salmon Liver cDNA library Salm... 44 0.001 2
(AC093500) Drosophila melanogaster 3L BAC RP98-29P5 (Roswell... 44 0.001 3
(CK895523) SGP158041 Atlantic salmon Swimbladder cDNA librar... 44 0.001 2
(ET459271) fcg2x.pk021.g8.f C. graminicola genomic sequence ... 46 0.001 2
(AY325173) Rattus norvegicus Aa2-050 mRNA, complete cds. 42 0.001 2
(AC116921) Dictyostelium discoideum chromosome 2 map 4624505... 48 0.001 2
(CK888747) SGP160744 Atlantic salmon Liver cDNA library Salm... 44 0.001 2
(CK888710) SGP160704 Atlantic salmon Liver cDNA library Salm... 44 0.001 2
(DQ121071) Hucho taimen clone ZA-64 microsatellite sequence. 46 0.001 2
(AQ073348) l(3)10419-5prime Drosophila melanogaster P lethal... 46 0.001 2
(EC849429) HAE00002983 Home-made, regular (lib1_ha) Histiona... 44 0.001 2
(CK888692) SGP160684 Atlantic salmon Liver cDNA library Salm... 44 0.001 2
(CZ639446) OM__Ba0184F20.r OM__Ba Oryza minuta genomic clone... 46 0.001 2
(FG720106) G1144P315RC24.T0 Anolis carolinensis pooled norma... 44 0.001 2
(CK888287) SGP149494 Atlantic salmon Liver cDNA library Salm... 44 0.001 2
(AR549998) Sequence 5129 from patent US 6747137. 42 0.001 2
(EY316131) CAWX26443.fwd CAWX Helobdella robusta Primary Ear... 42 0.001 3
(AC004309) Drosophila melanogaster (P1 DS02561 (D201)) DNA s... 42 0.002 2
(AJ832220) Drosophila melanogaster X chromosomal sequence fl... 40 0.002 2
(FC536686) CBPC4854.rev CBPC Thalassiosira pseudonana Temper... 44 0.002 2
(DR363202) 5734940 CERES-AL46 Arabidopsis thaliana cDNA clon... 42 0.002 2
(DH558317) Rattus norvegicus DNA, BAC clone: RNB1-069F10, 3'... 40 0.002 3
(AL050398) Arabidopsis thaliana DNA chromosome 4, cosmid clo... 44 0.002 2
(DX720944) 2212435 VV03 Ustilago maydis genomic clone 907415... 46 0.002 2
(CQ594321) Sequence 22079 from Patent WO0171042. 44 0.002 2
(AC139390) Rattus norvegicus clone CH230-84B5, *** SEQUENCIN... 44 0.002 2
(ET505049) fcg2x.pk563.c11.f C. graminicola genomic sequence... 46 0.002 2
(AR551783) Sequence 6914 from patent US 6747137. 44 0.002 3
(BW243685) Ciona intestinalis cDNA, clone:citb062f11, 5' end... 40 0.002 3
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 52 0.002 3
(FM203693) Triticum aestivum GSS, clone RD-16R_C07_A_050.ab1. 42 0.002 2
(CU525909) Theobroma cacao, mRNA sequence (KZ0ACL3YN08FM1). 44 0.002 2
(DQ656540) Papilio zelicaon clone D207 microsatellite sequence. 46 0.002 2
(AQ500876) V31B2 mTn-3xHA/lacZ Insertion Library Saccharomyc... 46 0.002 2
(EY492993) CBBP19228.rev CBBP Hirudo medicinalis hermaphrodi... 46 0.002 2
(CK888277) SGP149484 Atlantic salmon Liver cDNA library Salm... 44 0.002 2
(EC690012) JLE00002922 Jakoba libera Company (STANDARD) Jako... 40 0.002 2
(CU638851) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.002 2
(AC010716) Drosophila melanogaster 3L BAC RP98-11A21 (Roswel... 44 0.002 4
(AC022227) Mus musculus clone RP23-459D17, WORKING DRAFT SEQ... 50 0.002 2
(DX787221) 2687438 VV07 Ustilago maydis genomic clone 120452... 46 0.002 2
(AU269953) Dictyostelium discoideum vegetative cDNA clone:VS... 46 0.002 2
(ES451090) 26060 Myzus persicae 2001-12 (red), Fenton Myzus ... 42 0.002 2
(CQ606873) Sequence 34631 from Patent WO0171042. 44 0.002 2
(DL267572) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 44 0.002 2
(DJ134021) Method for identification of useful proteins deri... 44 0.002 2
(AC186229) Zea mays chromosome 1 clone CH201-160E24; ZMMBBc0... 44 0.002 2
(Z49705) S.cerevisiae chromosome XIII cosmid 8520. 46 0.002 2
(AC008353) Drosophila melanogaster, chromosome 2R, region 60... 50 0.002 2
(AC141886) Mus musculus BAC clone RP24-87G24 from chromosome... 50 0.002 2
(BX564226) Glossina morsitans morsitans (Tseatse fly) EST fr... 46 0.002 2
(CK896255) SGP158795 Atlantic salmon Swimbladder cDNA librar... 44 0.002 2
(BW113013) Ciona intestinalis cDNA, clone:rcitb063d21, 3' en... 44 0.002 2
(AC130990) Rattus norvegicus clone CH230-342J24, WORKING DRA... 44 0.002 3
(FI350324) CH321-42E14.y CHORI-321 Drosophila melanogaster g... 44 0.002 2
(CD472462) nad01-1ms5-e11 Nad01 Nuphar advena cDNA clone nad... 44 0.002 2
(DX634367) 1953218 VV02 Ustilago maydis genomic clone 801256... 42 0.002 2
(DX971946) CHORI105-20E20.TJ.2 CHORI105.pTARBAC1.3 Trypanoso... 42 0.002 2
(BJ377919) Dictyostelium discoideum cDNA clone:ddc26m10, 3' ... 42 0.002 2
(EB282963) CNSN01-F-002452-501 Normalized CNS library (juven... 50 0.002 2
(CZ280384) cp11b05.r Candida parapsilosis Random Genomic Lib... 34 0.002 3
(FM167217) Oryzias latipes EST, clone m009--B2_014. 46 0.002 2
(Z50046) S.cerevisiae chromosome IV cosmid 8358. 46 0.002 2
(EX810748) CBNA1618.rev CBNA Phycomyces blakesleeanus NRRL15... 40 0.002 2
(AC121349) Rattus norvegicus chromosome 1 clone RP32-485B21 ... 46 0.002 2
(AC108999) Rattus norvegicus clone CH230-269O20, *** SEQUENC... 44 0.002 2
(AF027623) Arabidopsis thaliana ecotype Bur-0 microsatellite... 42 0.002 2
(DW705125) EST028606 Trichophyton rubrum cDNA library 7 Tric... 44 0.002 2
(BZ098560) CH230-235O16.TJ CHORI-230 Segment 1 Rattus norveg... 40 0.002 3
(EB605945) AGENCOURT_54964614 D. mojavensis EST Drosophila m... 46 0.002 2

>(AU053437) Dictyostelium discoideum slug cDNA, clone SLI653.
Length = 462

Score = 412 bits (208), Expect(3) = 0.0
Identities = 208/208 (100%)
Strand = Plus / Plus


Query: 238 cactcactttttcaaacgtaaataatggtacaggtactatgctaccacctaaagcagata 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 cactcactttttcaaacgtaaataatggtacaggtactatgctaccacctaaagcagata 297


Query: 298 tatatagcaatccttttttaacagagtcaacatcgaaagcaacaacctcgacatccatat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tatatagcaatccttttttaacagagtcaacatcgaaagcaacaacctcgacatccatat 357


Query: 358 cgacttcgacaatatcatcgactacagcaacagcaacagcaacagccactaatacaacat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 cgacttcgacaatatcatcgactacagcaacagcaacagcaacagccactaatacaacat 417


Query: 418 cgacaacaatatcttcaaatattgattt 445
||||||||||||||||||||||||||||
Sbjct: 418 cgacaacaatatcttcaaatattgattt 445

Score = 313 bits (158), Expect(3) = 0.0
Identities = 158/158 (100%)
Strand = Plus / Plus


Query: 1 aaccacaaatacaaccacaaatacaaacacaaacacagccaattgttaatagtaacaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaccacaaatacaaccacaaatacaaacacaaacacagccaattgttaatagtaacaggt 60


Query: 61 atccaatgggattttcaggttttaataattcagcagcaacaacaacaacaacgacgacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atccaatgggattttcaggttttaataattcagcagcaacaacaacaacaacgacgacaa 120


Query: 121 aatcagcaacaactaatgttactactcaaaataataat 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcagcaacaactaatgttactactcaaaataataat 158

Score = 40.1 bits (20), Expect(3) = 0.0
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 166 caccacctgtattcccttcc 185
||||||||||||||||||||
Sbjct: 166 caccacctgtattcccttcc 185

Score = 34.2 bits (17), Expect(3) = 6e-05
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 13 aaccacaaatacaaacacaaa 33
|||||||||||||| ||||||
Sbjct: 1 aaccacaaatacaaccacaaa 21

Score = 34.2 bits (17), Expect(3) = 6e-05
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 1 aaccacaaatacaaccacaaa 21
|||||||||||||| ||||||
Sbjct: 13 aaccacaaatacaaacacaaa 33

Score = 34.2 bits (17), Expect(3) = 6e-05
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 94 cagcaacaacaacaacaacgacgac 118
||||| ||||||||||||| |||||
Sbjct: 91 cagcagcaacaacaacaacaacgac 115

Score = 34.2 bits (17), Expect(3) = 6e-05
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 91 cagcagcaacaacaacaacaacgac 115
||||| ||||||||||||| |||||
Sbjct: 94 cagcaacaacaacaacaacgacgac 118

Score = 34.2 bits (17), Expect(3) = 6e-05
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 387 acagcaacagcaacagc 403
|||||||||||||||||
Sbjct: 381 acagcaacagcaacagc 397

Score = 34.2 bits (17), Expect(3) = 6e-05
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 381 acagcaacagcaacagc 397
|||||||||||||||||
Sbjct: 387 acagcaacagcaacagc 403

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 495,022,480
Number of extensions: 35388161
Number of successful extensions: 5573619
Number of sequences better than 10.0: 23260
Length of query: 461
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 438
Effective length of database: 99,442,330,388
Effective search space: 43555740709944
Effective search space used: 43555740709944
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 7.29
Homology vs Protein
Query= Contig-U04229-1 (Contig-U04229-1Q) /CSM_Contig/Contig-U04229-1Q.Seq.d
(461 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 310,548,633
Number of extensions: 2641893
Number of successful extensions: 2560
Number of sequences better than 10.0: 0
Number of HSP's gapped: 2560
Number of HSP's successfully gapped: 0
Length of query: 153
Length of database: 1,061,185,681
Length adjustment: 115
Effective length of query: 38
Effective length of database: 685,314,161
Effective search space: 26041938118
Effective search space used: 26041938118
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.71 gvh: 0.29 alm: 0.53 top: 0.53 tms: 0.00 mit: 0.49 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: mitochondrial
40.0 %: nuclear
12.0 %: cytoplasmic
4.0 %: peroxisomal

>> prediction for Contig-U04229-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0