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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04076-1
Contig ID Contig-U04076-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04076-1 (Contig-U04076-1Q) /CSM_Contig/Contig-U04076-1Q.Seq.d
AATAATAATAATAACAACAATAGTAGTAATAATAATAATAATAACTCTTC
AAATATGTCAGAACCATCACCAATTTCAGCATTTTTTCATCAACCATCCA
CTCCATCAAAAACATTTAGAATGTTTGATAAAACACCATCAAGTCCATCA
ACACCATTAGGTTTCGATAAATTAACTCTTCCATCGATTTATTCCTCTTT
AGAAAATATTTCTCTTAACCCTTCAAATATTATGAATCATACTTCAACTT
CACTTTCAATCTCTAAACAACAAAAATTAAAAGAATCTGATTCTGATAAA
AAAGAAAAGAATGATGAATCTTCTTCAACCGGAGTTCCAATTGTTAAACA
AGAAGTCACTGAAGAAAAACAACAAGAATTAAAACAACAAGAATTAAAAC
AACAAGAATTAAAACAACAAGAATTAAAACAACAACAACAAGAGAAAGAA
GAAAAAGA
Gap no gap
Contig length 458
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3698083
End point 3697625
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U04076
List of clone(s) 

est1=SLF241Z,1,459
Translated Amino Acid sequence 
NNNNNNNSSNNNNNNSSNMSEPSPISAFFHQPSTPSKTFRMFDKTPSSPSTPLGFDKLTL
PSIYSSLENISLNPSNIMNHTSTSLSISKQQKLKESDSDKKEKNDESSSTGVPIVKQEVT
EEKQQELKQQELKQQELKQQELKQQQQEKEEK
Translated Amino Acid sequence (All Frames) 
Frame A:
NNNNNNNSSNNNNNNSSNMSEPSPISAFFHQPSTPSKTFRMFDKTPSSPSTPLGFDKLTL
PSIYSSLENISLNPSNIMNHTSTSLSISKQQKLKESDSDKKEKNDESSSTGVPIVKQEVT
EEKQQELKQQELKQQELKQQELKQQQQEKEEK


Frame B:
iiiittivviiiiitlqicqnhhqfqhffinhplhqkhleclikhhqvhqhh*vsin*lf
hrfipl*kiflltlqil*iilqlhfqslnnkn*knlilikkkrmmnllqpefqllnkksl
kknnkn*nnkn*nnkn*nnkn*nnnnkrkkkk


Frame C:
****qq********lfkyvrtitnfsifsstihsikni*nv**ntiksintirfr*inss
idlflfrkyfs*pfkyyesyfnftfnl*ttkikri*f**krke**iffnrssnc*trsh*
rkttrikttrikttrikttrikttttrerrkr
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U04076-1 (Contig-U04076-1Q)
/CSM_Contig/Contig-U04076-1Q.Seq.d
         (458 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04076-1 (Contig-U04076-1Q) /CSM_Contig/Conti...   622  e-179
Contig-U11307-1 (Contig-U11307-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U13239-1 (Contig-U13239-1Q) /CSM_Contig/Conti...    36  0.032
Contig-U12160-1 (Contig-U12160-1Q) /CSM_Contig/Conti...    36  0.032
Contig-U10804-1 (Contig-U10804-1Q) /CSM_Contig/Conti...    36  0.032
Contig-U01063-1 (Contig-U01063-1Q) /CSM_Contig/Conti...    36  0.032
Contig-U14340-1 (Contig-U14340-1Q) /CSM_Contig/Conti...    34  0.13
Contig-U13885-1 (Contig-U13885-1Q) /CSM_Contig/Conti...    34  0.13
Contig-U13101-1 (Contig-U13101-1Q) /CSM_Contig/Conti...    34  0.13
Contig-U12236-1 (Contig-U12236-1Q) /CSM_Contig/Conti...    34  0.13

>Contig-U04076-1 (Contig-U04076-1Q) /CSM_Contig/Contig-U04076-1Q.Seq.d
          Length = 458

 Score =  622 bits (314), Expect = e-179
 Identities = 314/314 (100%)
 Strand = Plus / Plus

                                                                       
Query: 45  ctcttcaaatatgtcagaaccatcaccaatttcagcattttttcatcaaccatccactcc 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  ctcttcaaatatgtcagaaccatcaccaatttcagcattttttcatcaaccatccactcc 104

                                                                       
Query: 105 atcaaaaacatttagaatgtttgataaaacaccatcaagtccatcaacaccattaggttt 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atcaaaaacatttagaatgtttgataaaacaccatcaagtccatcaacaccattaggttt 164

                                                                       
Query: 165 cgataaattaactcttccatcgatttattcctctttagaaaatatttctcttaacccttc 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cgataaattaactcttccatcgatttattcctctttagaaaatatttctcttaacccttc 224

                                                                       
Query: 225 aaatattatgaatcatacttcaacttcactttcaatctctaaacaacaaaaattaaaaga 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aaatattatgaatcatacttcaacttcactttcaatctctaaacaacaaaaattaaaaga 284

                                                                       
Query: 285 atctgattctgataaaaaagaaaagaatgatgaatcttcttcaaccggagttccaattgt 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atctgattctgataaaaaagaaaagaatgatgaatcttcttcaaccggagttccaattgt 344

                         
Query: 345 taaacaagaagtca 358
           ||||||||||||||
Sbjct: 345 taaacaagaagtca 358


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 442 gagaaagaagaaaaaga 458
           |||||||||||||||||
Sbjct: 442 gagaaagaagaaaaaga 458


>Contig-U11307-1 (Contig-U11307-1Q) /CSM_Contig/Contig-U11307-1Q.Seq.d
          Length = 1908

 Score = 44.1 bits (22), Expect = 1e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 266  aacaacaaaaattaaaagaatc 287
            ||||||||||||||||||||||
Sbjct: 1501 aacaacaaaaattaaaagaatc 1522


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                             
Query: 311  atgatgaatcttcttca 327
            |||||||||||||||||
Sbjct: 1385 atgatgaatcttcttca 1369


 Score = 28.2 bits (14), Expect = 7.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                          
Query: 272  aaaaattaaaagaa 285
            ||||||||||||||
Sbjct: 1347 aaaaattaaaagaa 1360


>Contig-U13239-1 (Contig-U13239-1Q) /CSM_Contig/Contig-U13239-1Q.Seq.d
          Length = 236

 Score = 36.2 bits (18), Expect = 0.032
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 265 aaacaacaaaaattaaaa 282
           ||||||||||||||||||
Sbjct: 5   aaacaacaaaaattaaaa 22


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8010
Number of Sequences: 6905
Number of extensions: 8010
Number of successful extensions: 948
Number of sequences better than 10.0: 348
length of query: 458
length of database: 5,674,871
effective HSP length: 16
effective length of query: 442
effective length of database: 5,564,391
effective search space: 2459460822
effective search space used: 2459460822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 6.13
Homology vs DNA 
Query= Contig-U04076-1 (Contig-U04076-1Q) /CSM_Contig/Contig-U04076-1Q.Seq.d
         (458 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU052872) Dictyostelium discoideum slug cDNA, clone SLF241.      597   e-166  1
(CU928909) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   0.019  2
(CS543183) Sequence 32 from Patent WO2007014951.                   48   0.29   1
(AR349007) Sequence 3618 from patent US 6583275.                   48   0.29   1
(EK282373) 1095462300209 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.29   1
(EK212715) 1095460104637 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.29   1
(AC205780) Pongo abelii BAC clone CH276-455B23 from chromoso...    38   0.41   6
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s...    40   0.43   8
(AC130772) Rattus norvegicus clone CH230-202M3, *** SEQUENCI...    36   0.62   2
(AC157002) Bos taurus clone CH240-69N13, WORKING DRAFT SEQUE...    36   0.62   2
(AC168014) Bos taurus clone CH240-159O9, WORKING DRAFT SEQUE...    36   0.62   2
(AC171333) Mus musculus chromosome 16 clone RP24-80G14, WORK...    34   0.62   2
(AC154631) Mus musculus BAC clone RP23-264F8 from 16, comple...    34   0.63   2
(AC140319) Mus musculus BAC clone RP23-413L6 from chromosome...    34   0.63   2
(BH158426) ENTSL91TF Entamoeba histolytica Sheared DNA Entam...    36   0.82   2
(CR788294) Zebrafish DNA sequence from clone DKEY-68A6 in li...    46   1.2    1
(CR383677) Zebrafish DNA sequence from clone CH211-157P16 in...    46   1.2    1
(BX004803) Zebrafish DNA sequence from clone CH211-119C20 in...    46   1.2    1
(AC110303) Rattus norvegicus clone CH230-223E3, *** SEQUENCI...    46   1.2    1
(FP236232) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    46   1.2    1
(EK331347) 1095467024736 Global-Ocean-Sampling_GS-31-01-01-1...    46   1.2    1
(AJ563070) Cryptosporidium parvum GSS, PAC clone pica_0013_e...    46   1.2    1
(AJ563055) Cryptosporidium parvum GSS, PAC clone pica_0013_d...    46   1.2    1
(BM170661) EST573184 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM169723) EST572246 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM166807) EST569330 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM166300) EST568823 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM166131) EST568654 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM165128) EST567651 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM163791) EST566314 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM162409) EST564932 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BM161197) EST563720 PyBS Plasmodium yoelii yoelii cDNA clon...    46   1.2    1
(BF298021) 059PbC09 Pb cDNA #17, Tommaso Pace, Marta Ponzi, ...    46   1.2    1
(BB980447) Plasmodium berghei str. ANKA cDNA clone: OK010619...    46   1.2    1
(BB979553) Plasmodium berghei str. ANKA cDNA clone: OK009648...    46   1.2    1
(GH609265) G1297P561FG10.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH608011) G1297P558FL5.T0 C. parvum KSU-1 normalized sporoz...    46   1.2    1
(GH605247) G1297P554FB21.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH604232) G1297P546FN24.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH604103) G1297P546FG13.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH601396) G1297P539FF17.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH595033) G1297P523FC10.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH592070) G1297P522FM11.T0 C. parvum KSU-1 normalized sporo...    46   1.2    1
(GH587985) G1297P516FO2.T0 C. parvum KSU-1 normalized sporoz...    46   1.2    1
(GH585310) G1297P54FA22.T0 C. parvum KSU-1 normalized sporoz...    46   1.2    1
(ET805110) CHO_OF700xb06f1.ab1 CHO_OF Nicotiana tabacum geno...    38   1.8    2
(AC184616) Strongylocentrotus purpuratus clone R3-3093F10, W...    34   2.3    4
(CU075420) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.3    2
(AC211069) Solanum lycopersicum chromosome 6 clone C06HBa028...    32   2.7    6
(AZ540483) ENTED68TF Entamoeba histolytica Sheared DNA Entam...    34   3.0    2
(AZ545300) ENTEV96TF Entamoeba histolytica Sheared DNA Entam...    34   3.0    2
(AC188199) Gossypium hirsutum chromosome UNKNOWN clone ZMMBB...    34   3.2    3
(AC189391) Brassica rapa subsp. pekinensis clone KBrB054G07,...    40   3.5    3
(AC020579) Arabidopsis thaliana chromosome 1 BAC F1O17 genom...    34   3.6    3
(AC180545) Strongylocentrotus purpuratus clone R3-3096C15, W...    34   3.7    5
(AC174334) Medicago truncatula clone mth2-154n22, WORKING DR...    40   4.4    2
(AC108784) Mus musculus chromosome 8, clone RP24-181O5, comp...    44   4.6    1
(AM462589) Vitis vinifera contig VV78X100780.3, whole genome...    44   4.6    1
(AC165519) Bos taurus clone CH240-171J18, WORKING DRAFT SEQU...    44   4.6    1
(FH380803) CHO_OF4740xo23f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   4.6    1
(CC560054) CH240_469C12.TARBAC13P2 CHORI-240 Bos taurus geno...    44   4.6    1
(DV537045) ZM_BFb0229M21.f ZM_BFb Zea mays cDNA 3', mRNA seq...    44   4.6    1
(DV196046) 5858 leuk Oncorhynchus mykiss cDNA clone 06RT_05M...    44   4.6    1
(AU270674) Dictyostelium discoideum vegetative cDNA clone:VS...    44   4.6    1
(DC199950) Plasmodium berghei cDNA clone:LV011393, liver sta...    44   4.6    1
(AU037199) Dictyostelium discoideum slug cDNA, clone SSB602.       44   4.6    1
(CK308989) SB02048A1H03.f1 normalized Keck-Tagu Library SB02...    44   4.6    1
(BJ345265) Dictyostelium discoideum cDNA clone:dda23l06, 3' ...    44   4.6    1
(FE147793) LV_HP_RA53N22f Litopenaeus vannamei hepatopancrea...    44   4.6    1
(AC181138) Strongylocentrotus purpuratus clone R3-16G10, WOR...    34   5.3    5
(CT311520) Sus scrofa genomic clone CH242-62J8, genomic surv...    30   5.9    3
(AL662822) Human DNA sequence from clone XXbac-17K10 on chro...    40   6.3    4
(CS741953) Sequence 9949 from Patent WO2005083127.                 38   6.4    2
(CP000885) Clostridium phytofermentans ISDg, complete genome.      32   6.5    2
(AC026962) Homo sapiens chromosome 3 clone RP11-264B9 map 3,...    34   6.7    4
(AC023126) Homo sapiens chromosome 8 clone RP11-333H13, WORK...    36   6.7    7
(CU856245) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   7.0    5
(EK033520) 1092957894731 Global-Ocean-Sampling_GS-31-01-01-1...    40   7.3    2
(AC164771) Bos taurus clone CH240-144C13, *** SEQUENCING IN ...    30   8.0    2
(AC230285) Bos taurus clone CH240-513P5, WORKING DRAFT SEQUE...    32   8.3    2
(AC199303) Spermophilus tridecemlineatus clone VMRC20-685N13...    30   8.3    2
(DD334048) A method of testing a sensitivity of tumor cells ...    32   8.3    2
(AL162742) Human DNA sequence from clone RP11-127L20 on chro...    32   8.3    2
(AC172961) Bos taurus clone CH240-310H11, WORKING DRAFT SEQU...    32   8.3    2
(AC104656) Homo sapiens BAC clone RP11-547J14 from 4, comple...    40   8.5    3
(AC231246) Choloepus hoffmanni clone CH281-217H18, WORKING D...    36   8.5    4
(AC199688) Spermophilus tridecemlineatus clone VMRC20-171D23...    30   8.5    2
(CU468254) Zebrafish DNA sequence from clone CH73-374J3 in l...    32   8.6    2
(AB014078) Homo sapiens genomic DNA, chromosome 6p21.3, HLA ...    40   9.7    2

>(AU052872) Dictyostelium discoideum slug cDNA, clone SLF241.
          Length = 459

 Score =  597 bits (301), Expect = e-166
 Identities = 301/301 (100%)
 Strand = Plus / Plus


Query: 45  ctcttcaaatatgtcagaaccatcaccaatttcagcattttttcatcaaccatccactcc 104
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  ctcttcaaatatgtcagaaccatcaccaatttcagcattttttcatcaaccatccactcc 104


Query: 105 atcaaaaacatttagaatgtttgataaaacaccatcaagtccatcaacaccattaggttt 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atcaaaaacatttagaatgtttgataaaacaccatcaagtccatcaacaccattaggttt 164


Query: 165 cgataaattaactcttccatcgatttattcctctttagaaaatatttctcttaacccttc 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cgataaattaactcttccatcgatttattcctctttagaaaatatttctcttaacccttc 224


Query: 225 aaatattatgaatcatacttcaacttcactttcaatctctaaacaacaaaaattaaaaga 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 aaatattatgaatcatacttcaacttcactttcaatctctaaacaacaaaaattaaaaga 284


Query: 285 atctgattctgataaaaaagaaaagaatgatgaatcttcttcaaccggagttccaattgt 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atctgattctgataaaaaagaaaagaatgatgaatcttcttcaaccggagttccaattgt 344


Query: 345 t 345
           |
Sbjct: 345 t 345

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 499,301,465
Number of extensions: 39139893
Number of successful extensions: 3762673
Number of sequences better than 10.0: 91
Length of query: 458
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 435
Effective length of database: 99,442,330,388
Effective search space: 43257413718780
Effective search space used: 43257413718780
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U04076-1 (Contig-U04076-1Q) /CSM_Contig/Contig-U04076-1Q.Seq.d
         (458 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC166388_1(BC166388|pid:none) Xenopus tropicalis neurofilament 3...    34   1.8
AP003706_5(AP003706|pid:none) Oryza sativa Japonica Group genomi...    34   1.8
CU633873_40(CU633873|pid:none) Podospora anserina genomic DNA ch...    33   3.1
AM270295_28(AM270295|pid:none) Aspergillus niger contig An13c001...    33   3.1
AP004852_1(AP004852|pid:none) Oryza sativa Japonica Group genomi...    33   3.1
BC047248_1(BC047248|pid:none) Xenopus laevis middle molecular we...    33   4.1
U85969_1(U85969|pid:none) Xenopus laevis middle molecular weight...    33   4.1
BC074454_1(BC074454|pid:none) Xenopus laevis middle molecular we...    33   4.1
CP000361_725(CP000361|pid:none) Arcobacter butzleri RM4018, comp...    32   5.3
AC006618_1(AC006618|pid:none) Caenorhabditis elegans cosmid C45B...    32   9.1

>BC166388_1(BC166388|pid:none) Xenopus tropicalis neurofilament 3,
           medium, mRNA (cDNA clone IMAGE:7603009), partial cds.
          Length = 604

 Score = 33.9 bits (76), Expect = 1.8
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = +1

Query: 76  SAFFHQPSTPSKTFRMFDKTPSSPSTPLGFDK---LTLPSIYSSLENISLNPSNIMN 237
           +++    STPS  FR    + SSPST   + +   L  P +YSS +++ L+ S+  N
Sbjct: 21  TSYSRTSSTPSSGFRSQSWSRSSPSTISSYKRTPNLAAPRVYSSTDSLDLSQSSAFN 77

Lambda     K      H
   0.310    0.125    0.353

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 414,077,818
Number of extensions: 6274863
Number of successful extensions: 14098
Number of sequences better than 10.0: 10
Number of HSP's gapped: 14062
Number of HSP's successfully gapped: 10
Length of query: 152
Length of database: 1,061,185,681
Length adjustment: 114
Effective length of query: 38
Effective length of database: 688,582,609
Effective search space: 26166139142
Effective search space used: 26166139142
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 29 (15.8 bits)
PSORT 

 psg: 0.61  gvh: 0.39  alm: 0.54  top: 0.53  tms: 0.00  mit: 0.31  mip: 0.08
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: mitochondrial
	 32.0 %: nuclear
	 24.0 %: cytoplasmic
	  8.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for Contig-U04076-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0