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Dicty_cDB
Contig List | Clone List | cDNA Library List
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U04028-1
Contig ID Contig-U04028-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U04028-1 (Contig-U04028-1Q) /CSM_Contig/Contig-U04028-1Q.Seq.d
ATAAATAGAAGTTATATTAAAAATTTAACAATAAAATCAAATTCATATAA
ACAACAATTACAACAAATTCAAACTCAAATTCAACCACAACAACAAGCTC
AACAAACCCAACAACAACAAACCCAACAACAAGCTCAACAACAAACCCAA
CAACAAATTCAACAACAACAACAATTAATTTTAGAAGATGAAGATTATTT
AAATTTACCAATTGGTTTAATTGGAGAATTTGTTGAGAATTTAGAGATTG
AAAAGGAGGGATTGGTTTTAATGCCTGGTGTTATACCACCATCTGTTCAA
ACATTAAAATTAATTGGAAATCAATTTTTAGTACCAGGGTTGTATACCAT
CATCAGTGAAAACATTGATAATTGTAGGATCAAAACAAATGATTGTACCA
GGTGTTATACCATCATCAGTTATCGATTTAAAATTATTAAATTCTGAACA
ACCAATTTTACATGGATCAATACCACAGTCATTACAATCATTAGAATTTG
AAAATAATAATGAAATGTCCAGTTTACCAGGCATACTTCCAACACCATCA
CAAATTAAGAAAATCAAATTTGGACCATCCTTCAACTGCCAATTGAAGCC
AGGCTTCATTCCATCGCTATTACAAGGTGGCCAAGTTGAGGAAATTGATT
TTTCATTCTGCCAAGGCGCCTACAATAAGCCATTGGTCGATGGCGCAATC
CCCAACACCGTCAAGGTGATCCATATGTCTAAAGAGTTTAATCAGCCTTT
GGAAAAGGGTTCTTTCCCATCAAGTTTGGAGGAACTCTATCTATGTGGTC
AATTTAATAAACAATTAACACCCTATTCAATTCCAAAGAATTTGAAGACT
TTAGACCTCGGCTACAGTTTCGATCAATCCATTGTACCTGGTTCACTACC
AAATTCAATCATTG
Gap no gap
Contig length 914
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 768112
End point 769026
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 2
Link to clone list U04028
List of clone(s) 

est1=SLE423F,1,693
est2=SLG241F,215,915
Translated Amino Acid sequence 
*ievilki*q*nqihinnnynkfklkfnhnnklnkpnnnkpnnklnnkpnnkfnnnnn*f
*kmkii*iyqlv*lenllri*rlkrrdwf*clvlyhhlfkh*n*leinf*YQGCIPSSVK
TLIIVGSKQMIVPGVIPSSVIDLKLLNSEQPILHGSIPQSLQSLEFENNNEMSSLPGILP
TPSQIKKIKFGPSFNCQLKPGFIPSLLQGGQVEEIDFSFCQGAYNKPLVDGAIPNTVKVI
HMSKEFNQPLEKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGYSFDQSIVPGSLP
NSII
Translated Amino Acid sequence (All Frames) 
Frame A:
inrsyiknltiksnsykqqlqqiqtqiqpqqqaqqtqqqqtqqqaqqqtqqqiqqqqqli
lededylnlpigligefvenleiekeglvlmpgvippsvqtlklignqflvpglytiise
nidncriktndctrcytiisyrfkiikf*ttnftwinttvitiiri*k***nvqftrhts
ntitn*enqiwtilqlpiearlhsiaitrwps*gn*ffilprrlq*aigrwrnpqhrqgd
pyv*rv*safgkgffpikfggtlsmwsi**tintlfnskefedfrprlqfrsihctwftt
kfnh


Frame B:
*ievilki*q*nqihinnnynkfklkfnhnnklnkpnnnkpnnklnnkpnnkfnnnnn*f
*kmkii*iyqlv*lenllri*rlkrrdwf*clvlyhhlfkh*n*leinf*YQGCIPSSVK
TLIIVGSKQMIVPGVIPSSVIDLKLLNSEQPILHGSIPQSLQSLEFENNNEMSSLPGILP
TPSQIKKIKFGPSFNCQLKPGFIPSLLQGGQVEEIDFSFCQGAYNKPLVDGAIPNTVKVI
HMSKEFNQPLEKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGYSFDQSIVPGSLP
NSII


Frame C:
k*kly*kfnnkikfi*ttittnsnsnsttttsstnptttnpttssttnpttnsttttinf
rr*rlfkftnwfnwric*efrd*kggigfnawcytticsnikinwksifstrvvyhhq*k
h**l*dqnk*lyqvlyhhqlsi*ny*ilnnqfymdqyhshynh*nlkiimkcpvyqayfq
hhhklrksnldhpstan*sqasfhryykvaklrklifhsakaptishwsmaqsptpsr*s
iclkslislwkrvlshqvwrnsiyvvnlinn*hpiqfqri*rl*tsatvsinplylvhyq
iqsl
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U04028-1 (Contig-U04028-1Q)
/CSM_Contig/Contig-U04028-1Q.Seq.d
         (914 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U04028-1 (Contig-U04028-1Q) /CSM_Contig/Conti...  1467  0.0
Contig-U09489-1 (Contig-U09489-1Q) /CSM_Contig/Conti...    38  0.016
Contig-U14067-1 (Contig-U14067-1Q) /CSM_Contig/Conti...    36  0.064
Contig-U12815-1 (Contig-U12815-1Q) /CSM_Contig/Conti...    36  0.064
Contig-U11740-1 (Contig-U11740-1Q) /CSM_Contig/Conti...    36  0.064
Contig-U09161-1 (Contig-U09161-1Q) /CSM_Contig/Conti...    36  0.064
Contig-U14255-1 (Contig-U14255-1Q) /CSM_Contig/Conti...    34  0.25
Contig-U14136-1 (Contig-U14136-1Q) /CSM_Contig/Conti...    34  0.25
Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Conti...    34  0.25
Contig-U13656-1 (Contig-U13656-1Q) /CSM_Contig/Conti...    34  0.25

>Contig-U04028-1 (Contig-U04028-1Q) /CSM_Contig/Contig-U04028-1Q.Seq.d
          Length = 914

 Score = 1467 bits (740), Expect = 0.0
 Identities = 740/740 (100%)
 Strand = Plus / Plus

                                                                       
Query: 175 ttaattttagaagatgaagattatttaaatttaccaattggtttaattggagaatttgtt 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ttaattttagaagatgaagattatttaaatttaccaattggtttaattggagaatttgtt 234

                                                                       
Query: 235 gagaatttagagattgaaaaggagggattggttttaatgcctggtgttataccaccatct 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gagaatttagagattgaaaaggagggattggttttaatgcctggtgttataccaccatct 294

                                                                       
Query: 295 gttcaaacattaaaattaattggaaatcaatttttagtaccagggttgtataccatcatc 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gttcaaacattaaaattaattggaaatcaatttttagtaccagggttgtataccatcatc 354

                                                                       
Query: 355 agtgaaaacattgataattgtaggatcaaaacaaatgattgtaccaggtgttataccatc 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agtgaaaacattgataattgtaggatcaaaacaaatgattgtaccaggtgttataccatc 414

                                                                       
Query: 415 atcagttatcgatttaaaattattaaattctgaacaaccaattttacatggatcaatacc 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atcagttatcgatttaaaattattaaattctgaacaaccaattttacatggatcaatacc 474

                                                                       
Query: 475 acagtcattacaatcattagaatttgaaaataataatgaaatgtccagtttaccaggcat 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 acagtcattacaatcattagaatttgaaaataataatgaaatgtccagtttaccaggcat 534

                                                                       
Query: 535 acttccaacaccatcacaaattaagaaaatcaaatttggaccatccttcaactgccaatt 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 acttccaacaccatcacaaattaagaaaatcaaatttggaccatccttcaactgccaatt 594

                                                                       
Query: 595 gaagccaggcttcattccatcgctattacaaggtggccaagttgaggaaattgatttttc 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gaagccaggcttcattccatcgctattacaaggtggccaagttgaggaaattgatttttc 654

                                                                       
Query: 655 attctgccaaggcgcctacaataagccattggtcgatggcgcaatccccaacaccgtcaa 714
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 attctgccaaggcgcctacaataagccattggtcgatggcgcaatccccaacaccgtcaa 714

                                                                       
Query: 715 ggtgatccatatgtctaaagagtttaatcagcctttggaaaagggttctttcccatcaag 774
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggtgatccatatgtctaaagagtttaatcagcctttggaaaagggttctttcccatcaag 774

                                                                       
Query: 775 tttggaggaactctatctatgtggtcaatttaataaacaattaacaccctattcaattcc 834
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tttggaggaactctatctatgtggtcaatttaataaacaattaacaccctattcaattcc 834

                                                                       
Query: 835 aaagaatttgaagactttagacctcggctacagtttcgatcaatccattgtacctggttc 894
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aaagaatttgaagactttagacctcggctacagtttcgatcaatccattgtacctggttc 894

                               
Query: 895 actaccaaattcaatcattg 914
           ||||||||||||||||||||
Sbjct: 895 actaccaaattcaatcattg 914


 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                          
Query: 1  ataaatagaagttatattaaaaatttaacaat 32
          ||||||||||||||||||||||||||||||||
Sbjct: 1  ataaatagaagttatattaaaaatttaacaat 32


>Contig-U09489-1 (Contig-U09489-1Q) /CSM_Contig/Contig-U09489-1Q.Seq.d
          Length = 596

 Score = 38.2 bits (19), Expect = 0.016
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 404 gttataccatcatcagtta 422
           |||||||||||||||||||
Sbjct: 170 gttataccatcatcagtta 188


 Score = 30.2 bits (15), Expect = 4.0
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 343 tataccatcatcagt 357
           |||||||||||||||
Sbjct: 172 tataccatcatcagt 186


>Contig-U14067-1 (Contig-U14067-1Q) /CSM_Contig/Contig-U14067-1Q.Seq.d
          Length = 1279

 Score = 36.2 bits (18), Expect = 0.064
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 434 ttattaaattctgaacaa 451
           ||||||||||||||||||
Sbjct: 823 ttattaaattctgaacaa 840


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,308
Number of Sequences: 6905
Number of extensions: 16308
Number of successful extensions: 2158
Number of sequences better than 10.0: 231
length of query: 914
length of database: 5,674,871
effective HSP length: 16
effective length of query: 898
effective length of database: 5,564,391
effective search space: 4996823118
effective search space used: 4996823118
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 6.11
Homology vs DNA 
Query= Contig-U04028-1 (Contig-U04028-1Q) /CSM_Contig/Contig-U04028-1Q.Seq.d
         (914 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU061823) Dictyostelium discoideum slug cDNA, clone SLG241.     1388   0.0    1
(AU061487) Dictyostelium discoideum slug cDNA, clone SLE423.      706   0.0    2
(ET384945) S0205F13_T7 CHORI-214 Salmo salar genomic clone S...    38   0.008  2
(ET227940) S0078F18_T7 CHORI-214 Salmo salar genomic clone S...    38   0.008  2
(ET304070) S0049M06_T7 CHORI-214 Salmo salar genomic clone S...    38   0.008  2
(DY922110) CHAY5376.b1_P24.ab1 CHA(XYZ) common wild sunflowe...    54   0.010  1
(DY921888) CHAY5170.b1_D21.ab1 CHA(XYZ) common wild sunflowe...    54   0.010  1
(CK426425) rx15c04.y1 Meloidogyne paranaensis egg SMART pGEM...    38   0.15   3
(CK426433) rx15d03.y1 Meloidogyne paranaensis egg SMART pGEM...    38   0.15   3
(EL464775) CHTS3724.b1_G20.ab1 CHT(LMS) Jerusalem artichoke ...    50   0.15   1
(CD854856) DH0AMM35ZF05ZZM1 HaDevR6 Helianthus annuus cDNA c...    50   0.15   1
(EC292264) BRAINF089687O24 POSSUM_01-POSSUM-C-BRAIN-2KB Tric...    42   0.47   2
(DX339791) OR_ABa0266I24.r OR_ABa Oryza ridleyi genomic clon...    48   0.60   1
(AC189287) Solanum lycopersicum chromosome 5 clone C05HBa016...    44   0.90   2
(CI325204) Oryza sativa Japonica Group cDNA, clone: J01B3091...    38   1.0    2
(EU477631) Epiophlebia superstes 12S ribosomal RNA gene, par...    38   1.1    2
(AF266094) Epiophlebia superstes large subunit ribosomal RNA...    38   1.1    2
(AC006909) Caenorhabditis elegans clone Y82E9, *** SEQUENCIN...    36   1.2    2
(AC006725) Caenorhabditis elegans clone Y22D7, *** SEQUENCIN...    36   1.3    2
(AC084153) Caenorhabditis elegans cosmid Y22D7AL, complete s...    36   1.3    2
(CP001184) Ureaplasma urealyticum serovar 10 str. ATCC 33699...    38   1.5    12
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    38   1.5    6
(AE014825) Plasmodium falciparum 3D7 chromosome 14 section 1...    36   1.6    7
(CZ882083) OC__Ba0285A07.f OC__Ba Oryza coarctata genomic cl...    34   1.6    2
(CZ826133) OC__Ba0206D20.f OC__Ba Oryza coarctata genomic cl...    34   1.6    2
(CZ847400) OC__Ba0234K23.r OC__Ba Oryza coarctata genomic cl...    34   1.7    2
(AC115581) Dictyostelium discoideum chromosome 2 map complem...    40   2.3    5
(DQ223429) Liriodendron tulipifera putative Gigantea gene, p...    46   2.4    1
(AC156964) Bos taurus clone CH240-64A18, WORKING DRAFT SEQUE...    46   2.4    1
(ER520041) 1093015558629 Global-Ocean-Sampling_GS-35-01-01-1...    46   2.4    1
(EK353281) 1095468221842 Global-Ocean-Sampling_GS-31-01-01-1...    46   2.4    1
(EJ924833) 1093018776913 Global-Ocean-Sampling_GS-30-02-01-1...    46   2.4    1
(DU645234) Lup 115, Lupinus angustifolius 83A:476 Lupinus an...    46   2.4    1
(CZ781209) OC__Ba0142K06.f OC__Ba Oryza coarctata genomic cl...    46   2.4    1
(CZ762998) OC__Ba0117E08.r OC__Ba Oryza coarctata genomic cl...    46   2.4    1
(AV222811) Mus musculus 18 days pregnant adult female placen...    46   2.4    1
(AY458637) Uncultured marine bacterium 440 clone EBAC750-02H...    46   2.4    1
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    36   3.3    7
(AC194594) Zea mays chromosome 1 clone CH201-233I7; ZMMBBc02...    40   3.5    3
(AM479439) Vitis vinifera contig VV78X147455.7, whole genome...    38   3.9    2
(AF187289) Picea abies clone 7ag3F gypsy-like Alisei family ...    30   5.4    3
(FD499317) Ltu01b_197_E01_C012.g1 Liriodendron Flower Bud Li...    34   6.1    2
(EB602185) AGENCOURT_56940317 D. grimshawi EST Drosophila gr...    38   6.3    2
(DT613859) ACAG-aaa25b11.g1 Hydra_EST_UCI-9 Hydra magnipapil...    42   6.4    2
(CP000882) Hemiselmis andersenii chromosome 2, complete sequ...    40   6.6    6
(BH148958) ENTQJ41TR Entamoeba histolytica Sheared DNA Entam...    34   7.6    2
(CR749763) Zebrafish DNA sequence from clone CH211-285D14 in...    44   9.3    1
(BX649423) Zebrafish DNA sequence from clone DKEY-18O7 in li...    44   9.3    1
(AC116459) Mus musculus, clone RP23-35F4, complete sequence.       44   9.3    1
(AC111083) Mus musculus chromosome 3, clone RP23-142D9, comp...    44   9.3    1
(AC190201) Pan troglodytes BAC clone CH251-623A6 from chromo...    44   9.3    1
(FJ068635) Pinus taeda isolate 5869 anonymous locus 0_235_01...    44   9.3    1
(AP009847) Lotus japonicus genomic DNA, clone: LjT02E24, TM1...    44   9.3    1
(Z83316) Caenorhabditis elegans Cosmid B0379.                      44   9.3    1
(U28740) Caenorhabditis elegans cosmid B0563, complete seque...    44   9.3    1
(AL032656) Caenorhabditis elegans YAC Y106G6E.                     44   9.3    1
(AF100655) Caenorhabditis elegans cosmid C44C8, complete seq...    44   9.3    1
(AL139339) Human DNA sequence from clone RP11-225H22 on chro...    44   9.3    1
(AC156048) Bos taurus clone CH240-49N24, WORKING DRAFT SEQUE...    44   9.3    1
(AC152292) Bos taurus clone CH240-3J2, WORKING DRAFT SEQUENC...    44   9.3    1
(AC139652) Rattus norvegicus clone CH230-167K10, WORKING DRA...    44   9.3    1
(FP085429) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.3    1
(CU993822) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   9.3    1
(CR749764) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    44   9.3    1
(AC207874) Zea mays chromosome 1 clone CH201-212J16; ZMMBBc0...    44   9.3    1
(AC189285) Solanum lycopersicum chromosome 5 clone C05HBa004...    44   9.3    1
(AC186291) Solanum lycopersicum chromosome 5 clone C05HBa016...    44   9.3    1
(AC173605) Bos taurus clone CH240-300A9, WORKING DRAFT SEQUE...    44   9.3    1
(AC006882) Caenorhabditis elegans clone Y55F3Y, *** SEQUENCI...    44   9.3    1
(ER409066) 1095366064282 Global-Ocean-Sampling_GS-34-01-01-1...    44   9.3    1
(ER341102) 1092344347169 Global-Ocean-Sampling_GS-34-01-01-1...    44   9.3    1
(EK306160) 1095462382253 Global-Ocean-Sampling_GS-31-01-01-1...    44   9.3    1
(EK164731) 1095458046551 Global-Ocean-Sampling_GS-31-01-01-1...    44   9.3    1
(EK041807) 1092959524630 Global-Ocean-Sampling_GS-31-01-01-1...    44   9.3    1
(EJ989840) 1093023039744 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ947122) 1093018919188 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ944832) 1093018908156 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ809181) 1093017478989 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ780973) 1093017252513 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ691651) 1092956005095 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ653406) 1092954009229 Global-Ocean-Sampling_GS-30-02-01-1...    44   9.3    1
(EJ195453) 1092344233286 Global-Ocean-Sampling_GS-27-01-01-1...    44   9.3    1
(EJ111387) 1092343155600 Global-Ocean-Sampling_GS-27-01-01-1...    44   9.3    1
(EJ011473) 1095403727430 Global-Ocean-Sampling_GS-26-01-01-1...    44   9.3    1
(EI473697) PV_GBa0083F11.f PV_GBa Phaseolus vulgaris genomic...    44   9.3    1
(DX935137) CSH028 BayGenomics Gene Trap Library pGT0Lxf Mus ...    44   9.3    1
(DU226710) 1098574236471 CHORI-243 Ovis aries genomic clone ...    44   9.3    1
(CZ955191) 269704 Tomato EcoRI BAC Library Solanum lycopersi...    44   9.3    1
(CW885437) RPCI42_102C21.TJ RPCI-42 Bos taurus genomic clone...    44   9.3    1
(CC536049) CH240_414P18.TARBAC13P2 CHORI-240 Bos taurus geno...    44   9.3    1
(AG462737) Mus musculus molossinus DNA, clone:MSMg01-351F11....    44   9.3    1
(DY288883) IC0AAA70DD08RM1 CitNFL Citrus clementina cDNA 5',...    44   9.3    1
(CX673472) UCRCS10_22H04_g Madame Vinous Sweet Orange Multip...    44   9.3    1
(CB387626) OSTF083F11_1 AD-wrmcDNA Caenorhabditis elegans cD...    44   9.3    1
(CB387601) OSTF083A8_1 AD-wrmcDNA Caenorhabditis elegans cDN...    44   9.3    1
(FC817435) Sr_pAMT7_08o08_T7 S. ratti mixed stage pAMP Stron...    44   9.3    1
(FC814999) Sr_pAMT7_01m19_T7 S. ratti mixed stage pAMP Stron...    44   9.3    1
(EY684611) CS00-C2-003-015-C03-CT.F Sweet orange bark, green...    44   9.3    1
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet...    44   9.3    1
(CP000742) Methanococcus vannielii SB, complete genome.            44   9.3    1
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         36   9.6    13

>(AU061823) Dictyostelium discoideum slug cDNA, clone SLG241.
          Length = 701

 Score = 1388 bits (700), Expect = 0.0
 Identities = 700/700 (100%)
 Strand = Plus / Plus


Query: 215 gtttaattggagaatttgttgagaatttagagattgaaaaggagggattggttttaatgc 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtttaattggagaatttgttgagaatttagagattgaaaaggagggattggttttaatgc 60


Query: 275 ctggtgttataccaccatctgttcaaacattaaaattaattggaaatcaatttttagtac 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggtgttataccaccatctgttcaaacattaaaattaattggaaatcaatttttagtac 120


Query: 335 cagggttgtataccatcatcagtgaaaacattgataattgtaggatcaaaacaaatgatt 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagggttgtataccatcatcagtgaaaacattgataattgtaggatcaaaacaaatgatt 180


Query: 395 gtaccaggtgttataccatcatcagttatcgatttaaaattattaaattctgaacaacca 454
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtaccaggtgttataccatcatcagttatcgatttaaaattattaaattctgaacaacca 240


Query: 455 attttacatggatcaataccacagtcattacaatcattagaatttgaaaataataatgaa 514
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attttacatggatcaataccacagtcattacaatcattagaatttgaaaataataatgaa 300


Query: 515 atgtccagtttaccaggcatacttccaacaccatcacaaattaagaaaatcaaatttgga 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgtccagtttaccaggcatacttccaacaccatcacaaattaagaaaatcaaatttgga 360


Query: 575 ccatccttcaactgccaattgaagccaggcttcattccatcgctattacaaggtggccaa 634
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccatccttcaactgccaattgaagccaggcttcattccatcgctattacaaggtggccaa 420


Query: 635 gttgaggaaattgatttttcattctgccaaggcgcctacaataagccattggtcgatggc 694
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttgaggaaattgatttttcattctgccaaggcgcctacaataagccattggtcgatggc 480


Query: 695 gcaatccccaacaccgtcaaggtgatccatatgtctaaagagtttaatcagcctttggaa 754
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcaatccccaacaccgtcaaggtgatccatatgtctaaagagtttaatcagcctttggaa 540


Query: 755 aagggttctttcccatcaagtttggaggaactctatctatgtggtcaatttaataaacaa 814
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagggttctttcccatcaagtttggaggaactctatctatgtggtcaatttaataaacaa 600


Query: 815 ttaacaccctattcaattccaaagaatttgaagactttagacctcggctacagtttcgat 874
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttaacaccctattcaattccaaagaatttgaagactttagacctcggctacagtttcgat 660


Query: 875 caatccattgtacctggttcactaccaaattcaatcattg 914
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caatccattgtacctggttcactaccaaattcaatcattg 700

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 980,085,888
Number of extensions: 60131730
Number of successful extensions: 5152916
Number of sequences better than 10.0: 101
Length of query: 914
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 890
Effective length of database: 99,340,224,878
Effective search space: 88412800141420
Effective search space used: 88412800141420
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U04028-1 (Contig-U04028-1Q) /CSM_Contig/Contig-U04028-1Q.Seq.d
         (914 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q5UPD4) RecName: Full=Putative F-box and FNIP repeat-containing...    97   1e-18
AC115604_12(AC115604|pid:none) Dictyostelium discoideum chromoso...    93   1e-17
(Q54FS1) RecName: Full=FNIP repeat-containing protein DDB_G02906...    91   7e-17
AC116960_62(AC116960|pid:none) Dictyostelium discoideum chromoso...    86   2e-15
AC116305_136(AC116305|pid:none) Dictyostelium discoideum chromos...    84   9e-15
AC115598_30(AC115598|pid:none) Dictyostelium discoideum chromoso...    83   1e-14
(Q54FS2) RecName: Full=FNIP repeat-containing protein DDB_G02906...    82   2e-14
(Q94481) RecName: Full=FNIP repeat-containing protein cigB;            82   3e-14
U66528_1(U66528|pid:none) Dictyostelium discoideum CigB (cigB) m...    82   3e-14
AC114265_1(AC114265|pid:none) Dictyostelium discoideum chromosom...    81   6e-14
AC115684_4(AC115684|pid:none) Dictyostelium discoideum chromosom...    67   4e-13
AC116960_34(AC116960|pid:none) Dictyostelium discoideum chromoso...    77   8e-13
AC116957_83(AC116957|pid:none) Dictyostelium discoideum chromoso...    76   2e-12
AC116305_99(AC116305|pid:none) Dictyostelium discoideum chromoso...    73   1e-11
AC117076_9(AC117076|pid:none) Dictyostelium discoideum chromosom...    72   3e-11
AC116984_119(AC116984|pid:none) Dictyostelium discoideum chromos...    70   8e-11
(Q8T126) RecName: Full=Probable inactive serine/threonine-protei...    70   1e-10
AC116984_124(AC116984|pid:none) Dictyostelium discoideum chromos...    69   2e-10
AC116982_8(AC116982|pid:none) Dictyostelium discoideum chromosom...    67   8e-10
AC115612_2(AC115612|pid:none) Dictyostelium discoideum chromosom...    66   2e-09
AC117176_63(AC117176|pid:none) Dictyostelium discoideum chromoso...    66   2e-09
AC116957_13(AC116957|pid:none) Dictyostelium discoideum chromoso...    64   5e-09
(Q556H2) RecName: Full=FNIP repeat-containing protein DDB_G02740...    64   5e-09
AC116986_27(AC116986|pid:none) Dictyostelium discoideum chromoso...    64   9e-09
(Q86AH2) RecName: Full=FNIP repeat-containing protein DDB_G02719...    64   9e-09
(Q54JC0) RecName: Full=Calmodulin-binding protein CmbB; AltName:...    63   2e-08
AC115680_16(AC115680|pid:none) Dictyostelium discoideum chromoso...    62   3e-08
AC116984_17(AC116984|pid:none) Dictyostelium discoideum chromoso...    59   2e-07
AC116977_30(AC116977|pid:none) Dictyostelium discoideum chromoso...    58   5e-07
(Q1ZXK1) RecName: Full=FNIP repeat-containing protein DDB_G02773...    58   5e-07
(Q5UQL2) RecName: Full=Putative F-box and FNIP repeat-containing...    56   2e-06
(Q5UP38) RecName: Full=Putative FNIP repeat-containing protein L...    55   3e-06
AC117267_6(AC117267|pid:none) Dictyostelium discoideum chromosom...    54   6e-06
AC116984_74(AC116984|pid:none) Dictyostelium discoideum chromoso...    50   8e-05
AC116987_15(AC116987|pid:none) Dictyostelium discoideum chromoso...    48   5e-04
AC114258_18(AC114258|pid:none) Dictyostelium discoideum chromoso...    47   7e-04
AC116957_4(AC116957|pid:none) Dictyostelium discoideum chromosom...    47   0.001
AC117075_45(AC117075|pid:none) Dictyostelium discoideum chromoso...    45   0.003
CP000500_39(CP000500|pid:none) Pichia stipitis CBS 6054 chromoso...    44   0.010
AC116032_2(AC116032|pid:none) Dictyostelium discoideum chromosom...    44   0.010
AC116957_6(AC116957|pid:none) Dictyostelium discoideum chromosom...    42   0.022
CP001251_1105(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,...    42   0.029
AP008212_1428(AP008212|pid:none) Oryza sativa (japonica cultivar...    42   0.038
(Q5UR85) RecName: Full=Putative FNIP repeat-containing protein R...    42   0.038
AC117081_26(AC117081|pid:none) Dictyostelium discoideum chromoso...    41   0.065
FM992688_643(FM992688|pid:none) Candida dubliniensis CD36 chromo...    41   0.065
EF081372_1(EF081372|pid:none) Triticum aestivum FORL2 mRNA, comp...    39   0.25
AM431594_1(AM431594|pid:none) Vitis vinifera contig VV78X160416....    39   0.25
AF049920_1(AF049920|pid:none) Petunia x hybrida PGPS/D4 (PGPS/D4...    39   0.25
CR382138_1069(CR382138|pid:none) Debaryomyces hansenii strain CB...    39   0.32
(Q5UPW6) RecName: Full=Putative FNIP repeat-containing protein L...    38   0.55
BA000040_1904(BA000040|pid:none) Bradyrhizobium japonicum USDA 1...    38   0.55
AF322013_3(AF322013|pid:none) Bradyrhizobium japonicum symbiotic...    38   0.55
AC115604_7(AC115604|pid:none) Dictyostelium discoideum chromosom...    38   0.55
AF063866_241(AF063866|pid:none) Melanoplus sanguinipes entomopox...    38   0.55
EU189481_1(EU189481|pid:none) Brassica rapa cultivar TO1434 flag...    37   0.72
EU189479_1(EU189479|pid:none) Brassica oleracea cultivar BI16 fl...    37   0.72
AE014187_303(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.72
AP005846_8(AP005846|pid:none) Oryza sativa Japonica Group genomi...    37   0.72
EU189471_1(EU189471|pid:none) Brassica carinata flagellin-sensin...    37   0.72
AC005623_13(AC005623|pid:none) Arabidopsis thaliana chromosome 2...    37   0.72
EF081371_1(EF081371|pid:none) Triticum aestivum FORL1 mRNA, comp...    37   0.72
AP008215_662(AP008215|pid:none) Oryza sativa (japonica cultivar-...    37   0.94
DQ166815_1(DQ166815|pid:none) Canis familiaris truncated nephroc...    37   1.2
AC120539_3(AC120539|pid:none) Oryza sativa (japonica cultivar-gr...    37   1.2
CR380956_514(CR380956|pid:none) Candida glabrata strain CBS138 c...    37   1.2
EU189478_1(EU189478|pid:none) Alyssum alyssoides flagellin-sensi...    36   1.6
CP001055_487(CP001055|pid:none) Elusimicrobium minutum Pei191, c...    36   1.6
AJ972660_1(AJ972660|pid:none) Glycine max pgip1 gene for polygal...    36   1.6
X78274_1(X78274|pid:none) Glycine max pgip gene.                       36   1.6
AC115682_10(AC115682|pid:none) Dictyostelium discoideum chromoso...    36   2.1
CP001357_745(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ...    36   2.1
AP008209_811(AP008209|pid:none) Oryza sativa (japonica cultivar-...    36   2.1
AC099732_4(AC099732|pid:none) Oryza sativa (japonica cultivar-gr...    36   2.1
AP008211_667(AP008211|pid:none) Oryza sativa (japonica cultivar-...    36   2.1
AC148607_8(AC148607|pid:none) Medicago truncatula clone mth2-43g...    35   2.7
FB916193_1(FB916193|pid:none) Sequence 135466 from Patent WO2008...    35   2.7
AM452744_1(AM452744|pid:none) Vitis vinifera contig VV78X122573....    35   2.7
FJ708675_1(FJ708675|pid:none) Arabidopsis thaliana leucine-rich ...    35   2.7
AC117072_27(AC117072|pid:none) Dictyostelium discoideum chromoso...    35   3.6
AP008208_694(AP008208|pid:none) Oryza sativa (japonica cultivar-...    35   3.6
AE009952_3351(AE009952|pid:none) Yersinia pestis KIM, complete g...    35   3.6
AC008017_28(AC008017|pid:none) Arabidopsis thaliana chromosome I...    35   3.6
AY139779_1(AY139779|pid:none) Arabidopsis thaliana At1g73080/F3N...    35   3.6
AC146937_18(AC146937|pid:none) Oryza sativa (japonica cultivar-g...    35   3.6
AK117178_1(AK117178|pid:none) Arabidopsis thaliana At1g73080 mRN...    35   3.6
CP000950_733(CP000950|pid:none) Yersinia pseudotuberculosis YPII...    35   3.6
AP003278_19(AP003278|pid:none) Oryza sativa Japonica Group genom...    35   3.6
AP003434_13(AP003434|pid:none) Oryza sativa Japonica Group genom...    35   4.7
AJ969071_14(AJ969071|pid:none) Spiroplasma citri pSci3 plasmid.        35   4.7
AP003705_18(AP003705|pid:none) Oryza sativa Japonica Group genom...    35   4.7
AP008210_541(AP008210|pid:none) Oryza sativa (japonica cultivar-...    35   4.7
AL731588_7(AL731588|pid:none) Oryza sativa (japonica cultivar-gr...    35   4.7
AP000386_6(AP000386|pid:none) Arabidopsis thaliana genomic DNA, ...    35   4.7
AB272460_1(AB272460|pid:none) Lethenteron japonicum VLR gene for...    35   4.7
EU189472_1(EU189472|pid:none) Brassica fruticulosa flagellin-sen...    35   4.7
FB916187_1(FB916187|pid:none) Sequence 135460 from Patent WO2008...    35   4.7
FB916185_1(FB916185|pid:none) Sequence 135458 from Patent WO2008...    35   4.7
AF378877_1(AF378877|pid:none) Arabidopsis thaliana AT3g06200/F28...    34   6.1
EF677650_1(EF677650|pid:none) Picea sitchensis clone WS02772_G01...    34   6.1
FJ771027_1(FJ771027|pid:none) Brassica rapa subsp. pekinensis po...    34   6.1
AF529693_1(AF529693|pid:none) Brassica napus polygalacturonase i...    34   6.1
DQ074398_1(DQ074398|pid:none) Myrmica rubra isolate i878r cytoch...    34   6.1
FM178382_2(FM178382|pid:none) Aliivibrio salmonicida LFI1238 pla...    34   6.1
FB902951_1(FB902951|pid:none) Sequence 122224 from Patent WO2008...    27   7.3
AF244888_1(AF244888|pid:none) Glycine max receptor-like protein ...    34   7.9
CR380959_1(CR380959|pid:none) Candida glabrata strain CBS138 chr...    34   7.9
DQ914917_2(DQ914917|pid:none) Arabidopsis thaliana ecotype Lands...    34   7.9
AF053993_1(AF053993|pid:none) Lycopersicon esculentum disease re...    34   7.9
AY793354_1(AY793354|pid:none) Lycopersicon pimpinellifolium Hcr2...    34   7.9
AF053998_1(AF053998|pid:none) Lycopersicon esculentum Hcr2-5D (H...    34   7.9
AM447362_3(AM447362|pid:none) Vitis vinifera contig VV78X207753....    34   7.9
AM480922_1(AM480922|pid:none) Vitis vinifera contig VV78X188546....    34   7.9
(Q06BH3) RecName: Full=Protein STRUBBELIG-RECEPTOR FAMILY 1; Alt...    34   7.9
AC006234_21(AC006234|pid:none) Arabidopsis thaliana chromosome 2...    34   7.9

>(Q5UPD4) RecName: Full=Putative F-box and FNIP repeat-containing
           protein L60;  &AY653733_60(AY653733|pid:none)
          Length = 621

 Score = 96.7 bits (239), Expect = 1e-18
 Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
 Frame = +2

Query: 338 GCIPSSVKTLIIVGSKQMIVP-GVIPSSVIDLKLLNSEQPILHGSI-PQSLQSLEFENNN 511
           G IP +VK L I  S    +  GVIPS +  L ++     IL  +I P++L  L   +
Sbjct: 306 GVIPDTVKILNIYPSNVCPISIGVIPSRLTHLNIVQELNQILDQTILPETLTYLRIPHCY 365

Query: 512 EMSSLPGILPTPSQIKKIKFGPSFNCQLKPGFIPSLLQGGQVEEIDFSFCQGAYNKPLVD 691
                PGI+P    + +++FG ++N  L+ G IP       V  + F      +N+PL
Sbjct: 366 NHPIKPGIIPL--SVTELEFGSNYNQVLEIGTIPP-----NVNSVTFGT---KFNQPLSK 415

Query: 692 GAIPNTVKVIHMSKEFNQPLEKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGYSF 871
           G IPN+VK I    EFNQ L+ G  P  +  LYL  +FN+ L    IP+++  LDLGY F
Sbjct: 416 GVIPNSVKKIRFGFEFNQLLKVGDIPYGVTHLYLGNRFNQPLEIGVIPESVTHLDLGYCF 475

Query: 872 DQSIVPGSLPNSI 910
            Q +  G +P+S+
Sbjct: 476 KQPLEIGMIPSSV 488

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 1/193 (0%)
 Frame = +2

Query: 338 GCIPSSVKTLIIVG-SKQMIVPGVIPSSVIDLKLLNSEQPILHGSIPQSLQSLEFENNNE 514
           G IP  V+ +I      + I  G+IP SVI L+   S + +  G IP++++ LE   NN+
Sbjct: 115 GTIPFGVEKIIFKSWYNKSISGGIIPGSVIHLEFKTSRK-LSKGDIPENIRHLELICNNQ 173

Query: 515 MSSLPGILPTPSQIKKIKFGPSFNCQLKPGFIPSLLQGGQVEEIDFSFCQGAYNKPLVDG 694
             SL  I+P   +  KI +    N    P  +  L+        D++F         ++G
Sbjct: 174 --SLGVIIPRNVKYLKIGYNILLNETTLPYGLTHLV-------FDYNF------NGKING 218

Query: 695 AIPNTVKVIHMSKEFNQPLEKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGYSFD 874
            IP TV  +    +FNQPLE    PS++  L     FN+ +T   IP ++K L+ GY F+
Sbjct: 219 FIPETVTHLEFGNKFNQPLEIDDIPSNVVYLKFGTDFNQPITSKVIPSSVKHLEFGYYFN 278

Query: 875 QSIVPGSLPNSII 913
           Q I  G LP  +I
Sbjct: 279 QPINRGVLPQGLI 291

 Score = 74.7 bits (182), Expect = 4e-12
 Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 4/173 (2%)
 Frame = +2

Query: 392 IVPGVIPSSVIDLKLLNSEQPILH-GSIPQSLQSLEFENNNEMSSLPGILPTPSQIKKIK 568
           I PG+IP SV +L+  ++   +L  G+IP ++ S+ F          G++P  + +KKI+
Sbjct: 369 IKPGIIPLSVTELEFGSNYNQVLEIGTIPPNVNSVTFGTKFNQPLSKGVIP--NSVKKIR 426

Query: 569 FGPSFNCQLKPGFIPSLLQGGQVEEIDFSFCQGAYNKPLVDGAIPNTVKVIHMSKEFNQP 748
           FG  FN  LK G IP          +   +    +N+PL  G IP +V  + +   F QP
Sbjct: 427 FGFEFNQLLKVGDIPY--------GVTHLYLGNRFNQPLEIGVIPESVTHLDLGYCFKQP 478

Query: 749 LEKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGYSF---DQSIVPGSL 898
           LE G  PSS+  +     +   +    IP  +K L+L Y +   D   +P S+
Sbjct: 479 LEIGMIPSSVTNIKFSMYYYLPIKRGVIPDRVKHLNLNYIYTGCDPDFIPKSV 531

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
 Frame = +2

Query: 395 VPGVIPSSVIDLKLLNS-EQPILHGSIPQSLQSLEFENNNEMSSLPGILPTPSQIKKIKF 571
           + G IP +V  L+  N   QP+    IP ++  L+F  +        ++P  S +K ++F
Sbjct: 216 INGFIPETVTHLEFGNKFNQPLEIDDIPSNVVYLKFGTDFNQPITSKVIP--SSVKHLEF 273

Query: 572 GPSFNCQLKPGFIPSLLQGGQVEEIDFSFCQGAYNKPLVDGAIPNTVKVIHMSKEFNQPL 751
           G  FN  +  G +P  L    +       C+  +N+ L  G IP+TVK++++      P+
Sbjct: 274 GYYFNQPINRGVLPQGLISLTLS------CK--FNQILEPGVIPDTVKILNIYPSNVCPI 325

Query: 752 EKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGYSFDQSIVPGSLPNSI 910
             G  PS L  L +  + N+ L    +P+ L  L + + ++  I PG +P S+
Sbjct: 326 SIGVIPSRLTHLNIVQELNQILDQTILPETLTYLRIPHCYNHPIKPGIIPLSV 378

 Score = 43.9 bits (102), Expect = 0.008
 Identities = 22/75 (29%), Positives = 41/75 (54%)
 Frame = +2

Query: 686 VDGAIPNTVKVIHMSKEFNQPLEKGSFPSSLEELYLCGQFNKQLTPYSIPKNLKTLDLGY 865
           VDG IP +VK +   K F +PL+ G+ P  +E++     +NK ++   IP ++  + L +
Sbjct: 91  VDGRIPCSVKCLTFGKSFKKPLKPGTIPFGVEKIIFKSWYNKSISGGIIPGSV--IHLEF 148

Query: 866 SFDQSIVPGSLPNSI 910
              + +  G +P +I
Sbjct: 149 KTSRKLSKGDIPENI 163

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,467,603,302
Number of extensions: 31168361
Number of successful extensions: 70843
Number of sequences better than 10.0: 115
Number of HSP's gapped: 70239
Number of HSP's successfully gapped: 279
Length of query: 304
Length of database: 1,061,185,681
Length adjustment: 128
Effective length of query: 176
Effective length of database: 642,824,337
Effective search space: 113137083312
Effective search space used: 113137083312
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.81  gvh: 0.43  alm: 0.36  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U04028-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0