| Contig-U03971-1 |
| Contig ID |
Contig-U03971-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
607 |
| Chromosome number (1..6, M) |
6 |
| Chromosome length |
3595308 |
| Start point |
2737048 |
| End point |
2737614 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
5 |
| Number of EST |
7 |
| Link to clone list |
U03971 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6. 9 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 6. 9 |
| Homology vs DNA |
Query= Contig-U03971-1 (Contig-U03971-1Q) /CSM_Contig/Contig-U03971-1Q.Seq.d
(607 letters)
Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU266127) Dictyostelium discoideum vegetative cDNA clone:VS... 698 0.0 4
(AU269355) Dictyostelium discoideum vegetative cDNA clone:VS... 696 0.0 3
(AU266126) Dictyostelium discoideum vegetative cDNA clone:VS... 1021 0.0 1
(AU262932) Dictyostelium discoideum vegetative cDNA clone:VS... 624 0.0 3
(BJ410079) Dictyostelium discoideum cDNA clone:ddv11k01, 5' ... 726 0.0 2
(AU269354) Dictyostelium discoideum vegetative cDNA clone:VS... 696 0.0 2
(AU052565) Dictyostelium discoideum slug cDNA, clone SLD529. 309 e-140 3
(AU061202) Dictyostelium discoideum slug cDNA, clone SLD529. 482 e-132 1
(AU265994) Dictyostelium discoideum vegetative cDNA clone:VS... 64 7e-06 1
(CP000501) Pichia stipitis CBS 6054 chromosome 7, complete s... 48 3e-04 2
(FE849929) CAFO759.fwd CAFO Pichia stipitis aerobic xylose M... 48 4e-04 2
(FE860572) CAFY703.rev CAFY Pichia stipitis oxygen limited x... 48 4e-04 2
(FE860573) CAFY703.fwd CAFY Pichia stipitis oxygen limited x... 48 4e-04 2
(FE846888) CAFI971.fwd CAFI Pichia stipitis aerobic dextrose... 48 4e-04 2
(FE860748) CAFY795.fwd CAFY Pichia stipitis oxygen limited x... 48 4e-04 2
(FE851791) CAFP1906.fwd CAFP Pichia stipitis aerobic xylose ... 48 4e-04 2
(FE860747) CAFY795.rev CAFY Pichia stipitis oxygen limited x... 48 4e-04 2
(FE846504) CAFI769.rev CAFI Pichia stipitis aerobic dextrose... 48 4e-04 2
(FE846887) CAFI971.rev CAFI Pichia stipitis aerobic dextrose... 48 4e-04 2
(FE849928) CAFO759.rev CAFO Pichia stipitis aerobic xylose M... 48 4e-04 2
(FE851051) CAFP1511.rev CAFP Pichia stipitis aerobic xylose ... 48 4e-04 2
(FE846505) CAFI769.fwd CAFI Pichia stipitis aerobic dextrose... 48 4e-04 2
(FE850755) CAFP1351.fwd CAFP Pichia stipitis aerobic xylose ... 48 4e-04 2
(FE851790) CAFP1906.rev CAFP Pichia stipitis aerobic xylose ... 48 4e-04 2
(FE850754) CAFP1351.rev CAFP Pichia stipitis aerobic xylose ... 48 4e-04 2
(ED115645) AUAC-aav76f11.g1 Ascaris suum whole genome shotgu... 38 0.006 2
(CU012063) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.017 2
(AC175013) Sus scrofa clone RP44-57M1, WORKING DRAFT SEQUENC... 38 0.017 2
(AC175012) Sus scrofa clone RP44-348A11, WORKING DRAFT SEQUE... 38 0.017 2
(CT389613) Sus scrofa genomic clone CH242-395K16, genomic su... 38 0.021 2
(DX146151) OG_ABa0181O05.r OG_ABa Oryza granulata genomic cl... 34 0.028 3
(DY449263) HSAA-aaa11f04.g1 UCI-11 Hydra vulgaris cDNA 5' si... 44 0.052 2
(CU693389) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.100 1
(CU074391) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.100 1
(DY895274) CeleSEQ15059 Cunninghamella elegans pBluescript (... 46 0.20 2
(DY894869) CeleSEQ14550 Cunninghamella elegans pBluescript (... 46 0.22 2
(DY886695) CeleSEQ2447 Cunninghamella elegans pBluescript (E... 46 0.24 2
(AC178983) Strongylocentrotus purpuratus clone R3-3122I4, WO... 46 0.24 4
(EY375545) CAXA1569.rev CAXA Helobdella robusta Subtracted L... 34 0.29 2
(AL606825) Human DNA sequence from clone RP11-20O12 on chrom... 46 0.32 2
(AM473355) Vitis vinifera contig VV78X150320.10, whole genom... 48 0.39 1
(EJ989487) 1093023036543 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.39 1
(EJ852769) 1093017900296 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.39 1
(U88308) Caenorhabditis elegans cosmid C32E8, complete seque... 36 0.52 3
(CT498303) A BAC library has been constructed from cultivar ... 44 0.77 2
(AL805967) Mouse DNA sequence from clone RP23-450K9 on chrom... 34 0.83 2
(AC165308) Mus musculus chromosome 8 clone RP23-447C13 map 8... 34 0.83 2
(BX324202) Zebrafish DNA sequence from clone CH211-158G9 in ... 32 0.83 2
(AL157780) Human DNA sequence from clone RP11-98E22 on chrom... 36 0.84 2
(AC046147) Mus musculus chromosome 12 clone RP23-265L9, *** ... 36 0.86 3
(BV674333) S216P6164FH3.T0 Masuku Pan troglodytes troglodyte... 36 1.1 2
(BH027393) RPCI-24-324D4.TV RPCI-24 Mus musculus genomic clo... 34 1.1 2
(AC130217) Mus musculus BAC clone RP23-237P18 from chromosom... 36 1.1 6
(AC140472) Mus musculus BAC clone RP24-403L12 from chromosom... 36 1.2 5
(AC101210) Mus musculus clone RP23-182F20, LOW-PASS SEQUENCE... 36 1.2 3
(CU459029) Zebrafish DNA sequence from clone CH73-74E13 in l... 46 1.6 1
(CR382123) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 46 1.6 1
(FP236227) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.6 1
(CU861542) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.6 1
(AC173976) Strongylocentrotus purpuratus clone R3-3004E3, WO... 46 1.6 1
(AC021783) Homo sapiens clone RP11-20O12, WORKING DRAFT SEQU... 46 1.6 1
(FH631037) CHO_OF4588xf24f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.6 1
(ER339444) 1092344333148 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.6 1
(ER309508) 1092343782129 Global-Ocean-Sampling_GS-34-01-01-1... 46 1.6 1
(B88987) CIT-HSP-2163P9.TF CIT-HSP Homo sapiens genomic clon... 46 1.6 1
(EH044212) AS1RI1P1B05.ab1 Roots inoculated with Bradirhyzob... 46 1.6 1
(DY894165) CeleSEQ13676 Cunninghamella elegans pBluescript (... 46 1.6 1
(DY891088) CeleSEQ7623 Cunninghamella elegans pBluescript (E... 46 1.6 1
(DY890337) CeleSEQ9314 Cunninghamella elegans pBluescript (E... 46 1.6 1
(BX119956) Mouse DNA sequence from clone RP23-301K15 on chro... 36 1.7 5
(U10402) Caenorhabditis elegans cosmid C34E10, complete sequ... 42 1.9 2
(AM476206) Vitis vinifera contig VV78X002075.5, whole genome... 44 1.9 2
(AM466188) Vitis vinifera contig VV78X024328.12, whole genom... 40 2.0 4
(AP009600) Solanum lycopersicum DNA, chromosome 8, clone: C0... 34 2.1 5
(AC137711) Mus musculus chromosome 5, clone RP23-282A16, com... 38 2.1 4
(CW585459) OA_ABa0117I08.r OA_ABa Oryza australiensis genomi... 36 2.4 2
(AC116891) Mus musculus clone RP24-528J24, WORKING DRAFT SEQ... 38 2.5 4
(AC128372) Rattus norvegicus clone CH230-164C7, *** SEQUENCI... 38 2.6 2
(AC159459) Pan troglodytes clone rp43-184b2, WORKING DRAFT S... 38 2.7 2
(ED978553) OA_CBa0179I12.r OA_CBa Oryza australiensis genomi... 38 2.7 2
(AC194392) Zea mays chromosome 7 clone ZMMBBb-623A8; ZMMBBb0... 44 2.9 3
(AX346153) Sequence 1224 from Patent WO0200928. 36 2.9 3
(AC000119) Homo sapiens BAC clone CTB-104I4 from 7, complete... 38 3.0 6
(CU928313) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 3.0 2
(AC146897) Gorilla gorilla, clone XX-413A16, complete sequence. 34 3.0 2
(CZ201775) AIAA-aad24n11.b1 Ancylostoma caninum whole genome... 36 3.3 2
(AC095358) Rattus norvegicus clone CH230-1E4, *** SEQUENCING... 36 3.4 3
(AC178054) Strongylocentrotus purpuratus clone R3-3056D21, W... 44 3.5 5
(AM474719) Vitis vinifera contig VV78X088138.4, whole genome... 32 3.5 2
(AC055775) Homo sapiens chromosome 4 clone RP11-412E1 map 4,... 36 3.6 4
(AC068878) Homo sapiens chromosome 4 clone RP11-153I21 map 4... 36 3.7 4
(ED513418) KBrB097F23R KBrB, Brassica rapa BamHI BAC library... 38 3.8 2
(CU012035) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 3.8 5
(ED528205) KBrB118D03F KBrB, Brassica rapa BamHI BAC library... 38 4.0 2
(CZ281950) cp19g09.f Candida parapsilosis Random Genomic Lib... 34 4.0 2
(EE262680) G03_G03fm1d5_pDNRf_520545 Myzus persicae, line F0... 32 4.0 2
(EE264644) C08_C08sg1n15_pDNRf_515490 Myzus persicae, tobacc... 32 4.0 2
(AC188477) Cavia porcellus clone CH234-506B2, WORKING DRAFT ... 38 4.1 3
(AC203107) Macaca mulatta clone CH250-171J15, WORKING DRAFT ... 32 4.4 4
(EA102678) Sequence 61 from patent US 7195870. 44 4.6 2
(AX323575) Sequence 63 from Patent WO0192565. 44 4.6 2
(AX277898) Sequence 61 from Patent WO0177375. 44 4.6 2
(GM995923) Sequence 63 from Patent EP2014776. 44 4.6 2
(AC016851) Homo sapiens clone RP11-8N23, WORKING DRAFT SEQUE... 38 4.9 3
(AC192515) Cavia porcellus clone CH234-66L4, WORKING DRAFT S... 38 5.1 3
(AC110523) Mus musculus clone RP23-370N2, WORKING DRAFT SEQU... 34 5.4 3
(AC134231) Oryza sativa Japonica Group chromosome 3 clone OS... 40 5.6 3
(AC102446) Mus musculus chromosome 5, clone RP24-201G17, com... 44 5.6 3
(AP006451) Oryza sativa Japonica Group genomic DNA, chromoso... 36 5.6 5
(AC092761) Papio anubis clone RP41-64C11, WORKING DRAFT SEQU... 36 5.9 3
(AC006799) Caenorhabditis elegans clone Y51H7, *** SEQUENCIN... 42 5.9 5
(AM464989) Vitis vinifera contig VV78X059401.4, whole genome... 44 6.0 2
(AP003934) Oryza sativa Japonica Group genomic DNA, chromoso... 40 6.0 2
(AC166254) Mus musculus 6 BAC RP24-409O18 (Roswell Park Canc... 44 6.1 1
(AC164419) Mus musculus chromosome 5, clone RP23-309G12, com... 44 6.1 1
(AC147225) Mus musculus BAC clone RP23-105L19 from chromosom... 44 6.1 1
(AC132607) Mus musculus BAC clone RP23-447F22 from 12, compl... 44 6.1 1
(AC097959) Rattus norvegicus BAC CH230-114G10 (Children's H... 44 6.1 1
(AC206795) Pongo abelii BAC clone CH276-289A19 from chromoso... 44 6.1 1
(AC205862) Pongo abelii BAC clone CH276-110I20 from chromoso... 44 6.1 1
(AY136628) Petunia integrifolia subsp. inflata S2 self-incom... 44 6.1 1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 44 6.1 1
(AP003244) Oryza sativa Japonica Group genomic DNA, chromoso... 44 6.1 1
(AP003200) Oryza sativa Japonica Group genomic DNA, chromoso... 44 6.1 1
(AM487854) Vitis vinifera contig VV78X177255.6, whole genome... 44 6.1 1
(AM472112) Vitis vinifera, whole genome shotgun sequence, co... 44 6.1 1
(AM468764) Vitis vinifera contig VV78X091055.28, whole genom... 44 6.1 1
(AM438229) Vitis vinifera contig VV78X170748.36, whole genom... 44 6.1 1
(AM437636) Vitis vinifera, whole genome shotgun sequence, co... 44 6.1 1
(FB571384) Sequence 251 from Patent EP1865317. 44 6.1 1
(EA689243) Sequence 68122 from patent US 7365185. 44 6.1 1
(AX655706) Sequence 5576 from Patent WO03000898. 44 6.1 1
(AC146891) Dasypus novemcinctus clone VMRC5-364E4, complete ... 44 6.1 1
(CU525306) H.melpomene DNA sequence from clone AEHM-13H8. 44 6.1 1
(AC159828) Mus musculus clone RP23-210K5, WORKING DRAFT SEQU... 44 6.1 1
(AC146962) Otolemur garnettii clone CH256-555A22, WORKING DR... 44 6.1 1
(AC128633) Rattus norvegicus clone CH230-239P1, *** SEQUENCI... 44 6.1 1
(CU928833) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(CU565330) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(CU467956) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(CU467022) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 6.1 1
(AC234750) Brassica rapa subsp. pekinensis chromosome Linkag... 44 6.1 1
(AC223492) Bos taurus clone CH240-468A14, WORKING DRAFT SEQU... 44 6.1 1
(AC222240) Bos taurus clone CH240-413A12, WORKING DRAFT SEQU... 44 6.1 1
(AC219082) Zea mays chromosome 2 clone ZMMBBb-117L9; ZMMBBb0... 44 6.1 1
(AC218111) Bos taurus clone CH240-223I20, WORKING DRAFT SEQU... 44 6.1 1
(AC203965) Zea mays chromosome 2 clone ZMMBBb-6N5; ZMMBBb000... 44 6.1 1
(AC201224) Strongylocentrotus purpuratus clone R3-15I15, WOR... 44 6.1 1
(AC194517) Callicebus moloch clone LB5-2H1, WORKING DRAFT SE... 44 6.1 1
(AC193845) Callicebus moloch clone LB5-55H20, WORKING DRAFT ... 44 6.1 1
(AC191023) Zea mays chromosome 2 clone CH201-451E16; ZMMBBc0... 44 6.1 1
(AC174900) Bos taurus clone CH240-215N11, WORKING DRAFT SEQU... 44 6.1 1
(AC163046) Bos taurus clone CH240-223I20, *** SEQUENCING IN ... 44 6.1 1
(ER397796) 1095349007430 Global-Ocean-Sampling_GS-34-01-01-1... 44 6.1 1
(ER324628) 1092344200885 Global-Ocean-Sampling_GS-34-01-01-1... 44 6.1 1
(EJ082730) 1095460062917 Global-Ocean-Sampling_GS-26-01-01-1... 44 6.1 1
(EI033101) hgz0007ae10.g1 hgz Oryza alta genomic clone hgz00... 44 6.1 1
(DX557023) GH_MBb0049C16r GH_MBb Gossypium hirsutum genomic ... 44 6.1 1
(DX214866) OR_ABa0089B04.r OR_ABa Oryza ridleyi genomic clon... 44 6.1 1
(DU870776) 101855 Tomato HindIII BAC Library Solanum lycoper... 44 6.1 1
(DE455327) Bombyx mori genomic DNA, Fosmid clone:GBMFno49_h0... 44 6.1 1
(CT176919) Sus scrofa genomic clone CH242-18A4, genomic surv... 44 6.1 1
(CR917907) Sus scrofa BES. 44 6.1 1
(CR821638) GR0AAA51AC01FM1 INRA BAC Bos taurus genomic clone... 44 6.1 1
(CL454682) ZMMBBb0489M03r ZMMBBb (HindIII) Zea mays subsp. m... 44 6.1 1
(CG884092) ZMMBBb0494O22r ZMMBBb (HindIII) Zea mays subsp. m... 44 6.1 1
(CG084332) PUIEQ57TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 6.1 1
(CE260146) tigr-gss-dog-17000346440487 Dog Library Canis lup... 44 6.1 1
(CE205131) tigr-gss-dog-17000372596697 Dog Library Canis lup... 44 6.1 1
(CC122439) NDL.94A22.T7 Notre Dame Liverpool Aedes aegypti g... 44 6.1 1
(EE567286) BNZB_UP_147_E06_27SEP2005_040 Brassica napus BNZB... 44 6.1 1
(DT357029) JGI_CABY509.rev CABY Pimephales promelas 2-14 day... 44 6.1 1
(DT031609) VVL059G10_684844 CabSau Berry Postveraison Mixed ... 44 6.1 1
(DB729807) Apis mellifera head cDNA, RIKEN full-length enric... 44 6.1 1
(CK628887) AM0-AA0008-121201-021-C05 AA0008 Apis mellifera c... 44 6.1 1
(CK594022) tad37b03.y2 Hydra EST -Kiel 1 Hydra vulgaris cDNA... 44 6.1 1
(FL501138) Mg_Nor01_33L03 Nor01 Mytilus galloprovincialis cD... 44 6.1 1
(EX612215) 255379623 Pea aphid whole body normalized full le... 44 6.1 1
(EW965888) BRHL_05_K21_T7 Headlice composite library with al... 44 6.1 1
(CR628337) Legionella pneumophila str. Lens complete genome. 44 6.1 1
(CR628336) Legionella pneumophila str. Paris complete genome. 44 6.1 1
(CP000675) Legionella pneumophila str. Corby, complete genome. 44 6.1 1
(CP000312) Clostridium perfringens SM101, complete genome. 44 6.1 1
(CP000246) Clostridium perfringens ATCC 13124, complete genome. 44 6.1 1
(BA000016) Clostridium perfringens str. 13 DNA, complete gen... 44 6.1 1
(AE017354) Legionella pneumophila subsp. pneumophila str. Ph... 44 6.1 1
(CU407192) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 6.1 3
(AC092515) Papio anubis clone RP41-66O1, WORKING DRAFT SEQUE... 36 6.2 3
(AM442138) Vitis vinifera, whole genome shotgun sequence, co... 40 6.2 3
(CU928119) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 36 6.2 4
(CN626253) tae56e09.y1 Hydra EST Darmstadt I Hydra magnipapi... 36 6.3 2
(AC004482) Arabidopsis thaliana chromosome 2 clone F27L4 map... 38 6.4 3
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 42 6.4 14
(CU855982) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 6.5 8
(AC173248) Bos taurus clone CH240-527G22, WORKING DRAFT SEQU... 32 6.6 6
(CU860988) A BAC library has been constructed from PN40024 g... 32 6.6 3
(AC170917) Mus musculus BAC clone RP23-160F6 from chromosome... 36 6.6 3
(AC153137) Mus musculus BAC clone RP23-471J16 from chromosom... 38 6.7 5
(CV199476) km14e11.y1 Pratylenchus vulnus NEM1 Pratylenchus ... 38 7.0 2
(AC124197) Mus musculus BAC clone RP23-298C4 from 15, comple... 34 7.0 4
(AC123719) Mus musculus chromosome 13, clone RP23-412A14, co... 36 7.0 3
(AQ302149) HS_3126_B1_D12_T7 CIT Approved Human Genomic Sper... 38 7.2 2
(CB936093) taa33b08.y2 Hydra EST -III Hydra magnipapillata c... 36 7.5 2
(CN775390) tae72g09.y1 Hydra EST Darmstadt I Hydra magnipapi... 36 7.5 2
(CV185898) taj16c04.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 36 7.6 2
(AC233059) Homo sapiens FOSMID clone ABC9-45487500I4 from ch... 38 7.6 2
(AC211431) Pongo abelii chromosome 15 clone CH276-453I8, WOR... 42 7.7 3
(CF657369) tac74g02.y1 Hydra EST -IV Hydra magnipapillata cD... 36 7.8 2
(AM011027) Bos taurus 3' EST, clone C0007390i21. 36 8.0 2
(AM488307) Vitis vinifera contig VV78X237392.11, whole genom... 34 8.1 3
(CF655096) tac60h05.y1 Hydra EST -IV Hydra magnipapillata cD... 36 8.1 2
(AC110505) Mus musculus chromosome 13 clone RP24-574L8 map 1... 32 8.3 7
(CF777328) tad09c06.y1 Hydra EST -IV Hydra magnipapillata cD... 36 8.3 2
(EE752853) 020502OCSI1032079HT OCS1 Ovis aries cDNA, mRNA se... 36 8.4 2
(DN246193) ACAE-aaa27e10.g1 Hydra EST UCI 5 Hydra magnipapil... 36 8.4 2
(DN242044) ACAD-aaa16f22.g1 Hydra_EST_UCI-8 Hydra magnipapil... 36 8.7 2
(AM485843) Vitis vinifera contig VV78X065136.5, whole genome... 40 8.7 2
(BP520822) Hydra magnipapillata cDNA, clone:hmp_18296. 36 8.8 2
(EE899517) B19451A FFB Bos taurus cDNA clone B1945 3', mRNA ... 36 8.9 2
(U97010) Caenorhabditis elegans cosmid W08A12, complete sequ... 34 8.9 5
(DN136327) ACAB-aaa76l03.g1 Hydra UCI6- barcoded EST's Hydra... 36 9.0 2
(AG303624) Mus musculus molossinus DNA, clone:MSMg01-083I10.... 30 9.0 3
(DT612963) ACAG-aaa24a08.g1 Hydra_EST_UCI-9 Hydra magnipapil... 36 9.0 2
(CD268269) tab82d02.x1 Hydra EST -III Hydra magnipapillata c... 36 9.1 2
(DN603989) ACAC-aab86c08.g1 Hydra EST UCI 7 Hydra magnipapil... 36 9.1 2
(CX055934) tai93e04.y2 Hydra EST UCI 5 ALP Hydra magnipapill... 36 9.2 2
(CV185784) taj14g12.y1 Hydra EST UCI 5 ALP Hydra magnipapill... 36 9.3 2
(DR435044) ACAB-aaa23g11.g1 Hydra UCI6- barcoded EST's Hydra... 36 9.3 2
(EA728622) Sequence 107501 from patent US 7365185. 38 9.3 2
(DN814381) ACAC-aac29g15.g1 Hydra EST UCI 7 Hydra magnipapil... 36 9.3 2
(DX445441) BE2018_O20_F IASMA L2 HindIII BAC library Vitis v... 40 9.3 2
(CF777080) tad09c06.x1 Hydra EST -IV Hydra magnipapillata cD... 36 9.4 2
(CV222894) taj54c01.y1 Hydra EST UCI 6 Hydra magnipapillata ... 36 9.4 2
(BP513860) Hydra magnipapillata cDNA, clone:hmp_10086. 36 9.4 2
(DN603257) ACAC-aab80b02.g1 Hydra EST UCI 7 Hydra magnipapil... 36 9.4 2
(EE752524) 020502OCSI1013067HT OCS1 Ovis aries cDNA, mRNA se... 36 9.5 2
(DT606241) ACAG-aaa30e12.g1 Hydra_EST_UCI-9 Hydra magnipapil... 36 9.5 2
(DT605274) ACAH-aaa06d03.g1 Hydra_EST_UCI-10 Hydra magnipapi... 36 9.6 2
(CX633412) taj40c07.y3 Hydra EST UCI 5 Hydra magnipapillata ... 36 9.6 2
(DT613234) ACAG-aaa85d06.g1 Hydra_EST_UCI-9 Hydra magnipapil... 36 9.6 2
(DN811000) ACAC-aab38c16.g1 Hydra EST UCI 7 Hydra magnipapil... 36 9.6 2
(DN243855) ACAE-aaa48j21.b1 Hydra EST UCI 5 Hydra magnipapil... 38 9.7 2
(DY051271) 000516BPPA004893HT BPPA Bos taurus cDNA 5', mRNA ... 36 9.7 2
(FE026630) C0009261H14.Q1KBM13R KN511 Ovis aries rectum and ... 36 9.7 2
(EE960572) K45171A FNM Bos taurus cDNA clone K4517 3', mRNA ... 36 9.8 2
(CN441379) BE04025B2E08 BE04 Normalized and Subtracted bovin... 36 9.8 2
(FE024315) C0009258A07.Q1KAM13R KN511 Ovis aries efferent ga... 36 9.8 2
(DT612591) ACAG-aaa97g04.g1 Hydra_EST_UCI-9 Hydra magnipapil... 36 9.9 2
(AM472113) Vitis vinifera, whole genome shotgun sequence, co... 42 10.0 2
>(AU266127) Dictyostelium discoideum vegetative cDNA clone:VSG208,
3' end single read.
Length = 589
Score = 698 bits (352), Expect(4) = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus
Query: 15 agcgaaggttatataacagtcgagaagaatttaacaaaatgtcagaaatcaaagaaaaga 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcgaaggttatataacagtcgagaagaatttaacaaaatgtcagaaatcaaagaaaaga 60
Query: 75 gttgttacaaatgtaaagaagttggtcatatctcacgtaattgcccaaagaatccagaag 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gttgttacaaatgtaaagaagttggtcatatctcacgtaattgcccaaagaatccagaag 120
Query: 135 ctggtgatcgtgcttgttatgtttgtaacgttgttggtcatttaagccgtgaatgtccac 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctggtgatcgtgcttgttatgtttgtaacgttgttggtcatttaagccgtgaatgtccac 180
Query: 195 aaaacccacaaccaaccttcgaaaagaaagacccaattaaatgttaccaatgtaatggtt 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaacccacaaccaaccttcgaaaagaaagacccaattaaatgttaccaatgtaatggtt 240
Query: 255 ttggtcattttgctagagattgtagaagaggtagagataacaaatgttacaactgtggtg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggtcattttgctagagattgtagaagaggtagagataacaaatgttacaactgtggtg 300
Query: 315 gtttaggtcacatctccaaggattgtccatcaccaagcaccagaggtcaagg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttaggtcacatctccaaggattgtccatcaccaagcaccagaggtcaagg 352
Score = 299 bits (151), Expect(4) = 0.0
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 366 ggtcgtgatgctgccaaatgttacaaatgtaaccaaccaggtcacatcgccaaagcttgc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggtcgtgatgctgccaaatgttacaaatgtaaccaaccaggtcacatcgccaaagcttgc 410
Query: 426 ccagaaaaccaatccgaaaattaaatttgaaaattaattattttcatatcatcataatca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ccagaaaaccaatccgaaaattaaatttgaaaattaattattttcatatcatcataatca 470
Query: 486 ttcaatacgcgatatgatgaatttttgtttt 516
|||||||||||||||||||||||||||||||
Sbjct: 471 ttcaatacgcgatatgatgaatttttgtttt 501
Score = 77.8 bits (39), Expect(4) = 0.0
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 514 ttttgtttctgtataaaaacaattggtcaatttaaattt 552
|||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttttgtttctgtataaaaacaattggtcaatttaaattt 536
Score = 50.1 bits (25), Expect(4) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 555 attgtatttattaatatccctcacc 579
|||||||||||||||||||||||||
Sbjct: 538 attgtatttattaatatccctcacc 562
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 803,080,808
Number of extensions: 54594749
Number of successful extensions: 5654592
Number of sequences better than 10.0: 253
Length of query: 607
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 584
Effective length of database: 99,442,330,388
Effective search space: 58074320946592
Effective search space used: 58074320946592
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 7.29 |
| Homology vs Protein |
Query= Contig-U03971-1 (Contig-U03971-1Q) /CSM_Contig/Contig-U03971-1Q.Seq.d
(607 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM270155_34(AM270155|pid:none) Aspergillus niger contig An07c038... 108 4e-26
AP007161_857(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 103 2e-25
AM920427_519(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 103 2e-25
(Q04832) RecName: Full=DNA-binding protein HEXBP; AltName: Full=... 100 2e-24
CT005272_169(CT005272|pid:none) Leishmania major strain Friedlin... 100 7e-24
AM502254_417(AM502254|pid:none) Leishmania infantum chromosome 36. 100 9e-24
CU928170_121(CU928170|pid:none) Kluyveromyces thermotolerans str... 97 3e-23
L03710_1(L03710|pid:none) Tetrahymena thermophila cnjB (cnjB) ge... 97 4e-23
AB047803_1(AB047803|pid:none) Ciona savignyi CsDEAD1b(CsVHb) mRN... 99 7e-23
CU640366_1371(CU640366|pid:none) Podospora anserina genomic DNA ... 99 2e-22
EF638949_1(EF638949|pid:none) Triatoma infestans clone TI-138 E3... 92 4e-22
AY728266_1(AY728266|pid:none) Trypanosoma cruzi voucher Dm28c zi... 106 5e-22
CR380956_335(CR380956|pid:none) Candida glabrata strain CBS138 c... 96 6e-22
EF070485_1(EF070485|pid:none) Maconellicoccus hirsutus clone WHM... 95 6e-22
AF104214_2(AF104214|pid:none) Trypanosoma cruzi proteasome beta ... 104 2e-21
AM989983_2(AM989983|pid:none) Zygosaccharomyces rouxii strain CB... 95 2e-21
CT005272_166(CT005272|pid:none) Leishmania major strain Friedlin... 99 4e-21
AM502254_413(AM502254|pid:none) Leishmania infantum chromosome 36. 99 4e-21
CT005272_165(CT005272|pid:none) Leishmania major strain Friedlin... 99 4e-21
A54598(A54598) universal minicircle sequence-binding protein - C... 97 7e-21
AY773184_1(AY773184|pid:none) Carassius auratus gibelio cellular... 93 1e-20
BT075226_1(BT075226|pid:none) Osmerus mordax clone omor-rgc-511-... 92 2e-20
U87108_1(U87108|pid:none) Trypanosoma equiperdum nucleic acid bi... 86 2e-20
AM494972_176(AM494972|pid:none) Leishmania braziliensis chromoso... 96 2e-20
AM494972_177(AM494972|pid:none) Leishmania braziliensis chromoso... 96 3e-20
CR382137_488(CR382137|pid:none) Debaryomyces hansenii strain CBS... 91 1e-19
AB193327_2(AB193327|pid:none) Daphnia magna nrk, vasa genes for ... 91 2e-19
AB193324_1(AB193324|pid:none) Daphnia magna vasa mRNA for VASA R... 92 2e-19
BT082475_1(BT082475|pid:none) Anoplopoma fimbria clone afim-evh-... 92 3e-19
AY753659_1(AY753659|pid:none) Bombyx mori zinc finger protein mR... 89 3e-19
AM270259_22(AM270259|pid:none) Aspergillus niger contig An12c002... 82 4e-19
AC025783_7(AC025783|pid:none) Oryza sativa chromosome 10 BAC OSJ... 96 6e-19
AB235177_1(AB235177|pid:none) Botryllus primigenus Bpvas mRNA fo... 87 9e-19
AE017345_218(AE017345|pid:none) Cryptococcus neoformans var. neo... 87 2e-18
(O42395) RecName: Full=Cellular nucleic acid-binding protein; ... 87 2e-18
FJ430683_1(FJ430683|pid:none) Lutzomyia shannoni clone LZ-B4 zin... 92 2e-18
AY228240_1(AY228240|pid:none) Danio rerio cellular nucleic acid-... 86 3e-18
DQ519386_1(DQ519386|pid:none) Synthetic construct CNBP mutant S1... 86 3e-18
AK226815_1(AK226815|pid:none) Arabidopsis thaliana mRNA for glyc... 88 3e-18
AB193326_1(AB193326|pid:none) Moina macrocopa vasa mRNA for VASA... 84 7e-18
AB259754_1(AB259754|pid:none) Polyandrocarpa misakiensis PmVas m... 89 7e-18
(P53996) RecName: Full=Cellular nucleic acid-binding protein; ... 85 8e-18
AM920436_1194(AM920436|pid:none) Penicillium chrysogenum Wiscons... 80 1e-17
BT057815_1(BT057815|pid:none) Salmo salar clone ssal-eve-533-370... 85 1e-17
AB265787_1(AB265787|pid:none) Neobenedenia girellae Ngvlg3 mRNA ... 80 1e-17
Y07751_1(Y07751|pid:none) X.laevis mRNA for cellular nucleic aci... 85 1e-17
AF144698_1(AF144698|pid:none) Bufo arenarum cellular nucleic aci... 85 1e-17
BC122020_1(BC122020|pid:none) Xenopus tropicalis CCHC-type zinc ... 84 1e-17
AK292119_1(AK292119|pid:none) Homo sapiens cDNA FLJ77718 complet... 84 2e-17
AK153414_1(AK153414|pid:none) Mus musculus bone marrow macrophag... 84 2e-17
AB047382_1(AB047382|pid:none) Hydra magnipapillata mRNA for vasa... 91 2e-17
AK340689_1(AK340689|pid:none) Acyrthosiphon pisum ACYPI000340 mR... 89 3e-17
AJ421478_10(AJ421478|pid:none) Mus musculus X-inactivation cente... 85 3e-17
DQ092367_1(DQ092367|pid:none) Homo sapiens cellular nucleic acid... 82 4e-17
(Q3T0Q6) RecName: Full=Cellular nucleic acid-binding protein; ... 83 5e-17
AY728266_2(AY728266|pid:none) Trypanosoma cruzi voucher Dm28c zi... 82 8e-17
AF232059_1(AF232059|pid:none) Synthetic construct of Bufo arenar... 82 1e-16
AY862149_1(AY862149|pid:none) Synthetic construct cellular nucle... 82 1e-16
I48298(I48298;S19960) cellular nucleic acid binding protein clon... 81 1e-16
CR382123_121(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 88 2e-16
CR382130_495(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 88 2e-16
AY862150_1(AY862150|pid:none) Synthetic construct cellular nucle... 81 2e-16
AF343317_1(AF343317|pid:none) Schizophyllum commune putative DNA... 83 2e-16
U43373_1(U43373|pid:none) Gallus gallus spleen cell DNA binding ... 83 2e-16
BT037952_1(BT037952|pid:none) Zea mays full-length cDNA clone ZM... 87 4e-16
AB306294_1(AB306294|pid:none) Enchytraeus japonensis Ej-vasa2 mR... 81 4e-16
BT057896_1(BT057896|pid:none) Salmo salar clone ssal-evd-555-260... 86 1e-15
(Q8WW36) RecName: Full=Zinc finger CCHC domain-containing protei... 79 2e-15
AC003952_6(AC003952|pid:none) Arabidopsis thaliana chromosome II... 78 7e-15
DQ452383_1(DQ452383|pid:none) Chlamys farreri vasa mRNA, complet... 79 1e-14
EU289291_1(EU289291|pid:none) Parhyale hawaiensis Vasa mRNA, com... 79 1e-14
FN359187_2(FN359187|pid:none) Schistosoma mansoni genome sequenc... 81 2e-14
FN359187_1(FN359187|pid:none) Schistosoma mansoni genome sequenc... 81 3e-14
AM478628_2(AM478628|pid:none) Vitis vinifera contig VV78X265481.... 75 5e-14
FN322065_1(FN322065|pid:none) Schistosoma japonicum isolate Anhu... 78 2e-13
FN322063_1(FN322063|pid:none) Schistosoma japonicum isolate Anhu... 78 2e-13
EZ000083_1(EZ000083|pid:none) TSA: Schistosoma japonicum SJCHGC0... 78 2e-13
FN322069_1(FN322069|pid:none) Schistosoma japonicum isolate Anhu... 77 3e-13
AY324193_1(AY324193|pid:none) Hyacinthus orientalis putative zin... 77 3e-13
CT005272_168(CT005272|pid:none) Leishmania major strain Friedlin... 77 3e-13
BX294024_10(BX294024|pid:none) Neurospora crassa DNA linkage gro... 74 3e-13
AM502254_416(AM502254|pid:none) Leishmania infantum chromosome 36. 77 5e-13
L19948_1(L19948|pid:none) Caenorhabditis elegans RNA helicase (g... 77 5e-13
U62772_1(U62772|pid:none) Caenorhabditis elegans RNA helicase (g... 77 5e-13
(P34689) RecName: Full=ATP-dependent RNA helicase glh-1; ... 77 5e-13
AM502254_389(AM502254|pid:none) Leishmania infantum chromosome 36. 67 1e-12
EF084868_1(EF084868|pid:none) Picea sitchensis clone WS0283_A15 ... 75 1e-12
C87818(C87818) protein glh-1 [imported] - Caenorhabditis elegans... 75 1e-12
AB016604_1(AB016604|pid:none) Ciona intestinalis CIDEAD1a mRNA f... 75 1e-12
AM494972_341(AM494972|pid:none) Leishmania braziliensis chromoso... 65 3e-12
AY389594_1(AY389594|pid:none) Hyacinthus orientalis ring zinc fi... 67 5e-12
AM269977_6(AM269977|pid:none) Aspergillus niger contig An01c0300... 73 7e-12
EU959680_1(EU959680|pid:none) Zea mays clone 219342 cellular nuc... 72 9e-12
CP000591_163(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 72 2e-11
AP008209_3080(AP008209|pid:none) Oryza sativa (japonica cultivar... 71 3e-11
AL138654_2(AL138654|pid:none) Arabidopsis thaliana DNA chromosom... 70 6e-11
BT036196_1(BT036196|pid:none) Zea mays full-length cDNA clone ZM... 59 8e-11
BT069151_1(BT069151|pid:none) Zea mays full-length cDNA clone ZM... 69 1e-10
AB047802_1(AB047802|pid:none) Ciona savignyi CsDEAD1a(CsVHa) mRN... 69 1e-10
EU966726_1(EU966726|pid:none) Zea mays clone 296774 actin depoly... 59 2e-10
AK118306_1(AK118306|pid:none) Arabidopsis thaliana At1g75560 mRN... 65 2e-10
AY085039_1(AY085039|pid:none) Arabidopsis thaliana clone 125348 ... 65 2e-10
BT062442_1(BT062442|pid:none) Zea mays full-length cDNA clone ZM... 67 4e-10
AK339982_1(AK339982|pid:none) Acyrthosiphon pisum ACYPI009958 mR... 67 4e-10
AY423380_1(AY423380|pid:none) Crassostrea gigas vasa-like protei... 67 4e-10
BT039440_1(BT039440|pid:none) Zea mays full-length cDNA clone ZM... 67 4e-10
T32759(T32759)hypothetical protein T12F5.3 - Caenorhabditis eleg... 67 5e-10
(O76743) RecName: Full=ATP-dependent RNA helicase glh-4; ... 67 5e-10
AF079508_1(AF079508|pid:none) Caenorhabditis elegans germline RN... 67 5e-10
BT076834_1(BT076834|pid:none) Caligus rogercresseyi clone crog-e... 64 9e-10
AL606647_6(AL606647|pid:none) Oryza sativa genomic DNA, chromoso... 60 1e-09
AK118554_1(AK118554|pid:none) Arabidopsis thaliana At5g52380 mRN... 65 2e-09
DQ103593_14(DQ103593|pid:none) Olimarabidopsis pumila clone BAC ... 65 2e-09
AB161683_1(AB161683|pid:none) Triticum aestivum WCSP3 mRNA for c... 65 2e-09
AC093921_17(AC093921|pid:none) Oryza sativa (japonica cultivar-g... 58 2e-09
AY340701_1(AY340701|pid:none) Simian immunodeficiency virus SIVm... 65 2e-09
AY542311_16(AY542311|pid:none) Sorghum bicolor clone SB20O07 b1-... 58 2e-09
U80837_3(U80837|pid:none) Caenorhabditis elegans cosmid F07E5, c... 64 3e-09
CP000588_425(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 64 3e-09
AK119758_1(AK119758|pid:none) Oryza sativa Japonica Group cDNA c... 64 3e-09
AB019226_11(AB019226|pid:none) Arabidopsis thaliana genomic DNA,... 64 3e-09
BC152525_1(BC152525|pid:none) Danio rerio zinc finger, CCHC doma... 58 4e-09
AF506236_1(AF506236|pid:none) Danio rerio FLJ22611-like protein ... 58 4e-09
BC134045_1(BC134045|pid:none) Danio rerio zinc finger, CCHC doma... 58 4e-09
BT075524_1(BT075524|pid:none) Osmerus mordax clone omor-rgc-502-... 63 6e-09
BC146120_1(BC146120|pid:none) Bos taurus zinc finger, CCHC domai... 63 7e-09
AM048812_1(AM048812|pid:none) Platynereis dumerilii mRNA for vas... 61 2e-08
AY814164_1(AY814164|pid:none) Schistosoma japonicum SJCHGC02361 ... 61 2e-08
AC147712_8(AC147712|pid:none) Medicago truncatula clone mth2-34f... 61 2e-08
AM411989_1(AM411989|pid:none) Macrostomum lignano mRNA for DEAD ... 61 2e-08
FJ605736_1(FJ605736|pid:none) Asterias forbesi vasa mRNA, comple... 61 2e-08
BC014841_1(BC014841|pid:none) Homo sapiens zinc finger, CCHC dom... 61 3e-08
CR860055_1(CR860055|pid:none) Pongo abelii mRNA; cDNA DKFZp469A1... 61 3e-08
BC032736_1(BC032736|pid:none) Homo sapiens zinc finger, CCHC dom... 61 3e-08
(Q8N567) RecName: Full=Zinc finger CCHC domain-containing protei... 61 3e-08
AP006535_12(AP006535|pid:none) Lotus japonicus genomic DNA, chro... 55 3e-08
AC140067_26(AC140067|pid:none) Medicago truncatula clone mth2-25... 60 4e-08
T34410(T34410)hypothetical protein F07E5.5 - Caenorhabditis eleg... 60 4e-08
AJ970161_1(AJ970161|pid:none) Puccinia coronata var. lolii parti... 60 4e-08
AM481935_1(AM481935|pid:none) Vitis vinifera contig VV78X191093.... 60 4e-08
AC121241_22(AC121241|pid:none) Medicago truncatula clone mth2-4n... 60 5e-08
AB174564_1(AB174564|pid:none) Macaca fascicularis brain cDNA clo... 60 5e-08
AB193325_1(AB193325|pid:none) Artemia franciscana vasa mRNA for ... 60 6e-08
AC141111_40(AC141111|pid:none) Medicago truncatula clone mth2-20... 60 6e-08
AC138199_20(AC138199|pid:none) Medicago truncatula clone mth2-15... 60 6e-08
AC151743_24(AC151743|pid:none) Medicago truncatula clone mth2-25... 60 6e-08
CR954208_414(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 59 8e-08
AM465501_2(AM465501|pid:none) Vitis vinifera contig VV78X136201.... 59 8e-08
(Q8R1J3) RecName: Full=Zinc finger CCHC domain-containing protei... 59 1e-07
EF206693_1(EF206693|pid:none) Fenneropenaeus chinensis VASA mRNA... 50 1e-07
CP001329_56(CP001329|pid:none) Micromonas sp. RCC299 chromosome ... 59 1e-07
DQ192583_1(DQ192583|pid:none) Feline immunodeficiency virus isol... 58 2e-07
AC130807_14(AC130807|pid:none) Medicago truncatula clone mth2-13... 57 3e-07
EU916176_114(EU916176|pid:none) Feldmannia species virus isolate... 57 3e-07
FJ441603_1(FJ441603|pid:none) Halocynthia roretzi vasa mRNA, com... 56 3e-07
AC146805_6(AC146805|pid:none) Medicago truncatula clone mth2-12n... 57 4e-07
AB253736_1(AB253736|pid:none) Simian immunodeficiency virus RNA,... 57 4e-07
BC068817_1(BC068817|pid:none) Xenopus laevis hypothetical protei... 57 4e-07
EF660904_1(EF660904|pid:none) Artemia franciscana clone 14KCK.1.... 57 5e-07
BT076781_1(BT076781|pid:none) Caligus rogercresseyi clone crog-e... 54 8e-07
CU928165_211(CU928165|pid:none) Kluyveromyces thermotolerans str... 54 8e-07
FN363668_1(FN363668|pid:none) Schistosoma mansoni genome sequenc... 51 9e-07
AY713445_1(AY713445|pid:none) Feline immunodeficiency virus clon... 56 9e-07
BC088591_1(BC088591|pid:none) Xenopus tropicalis zinc finger, CC... 56 9e-07
AL138666_1(AL138666|pid:none) S.pombe chromosome I cosmid c694. 55 1e-06
AY542960_1(AY542960|pid:none) Simian immunodeficiency virus gag ... 55 1e-06
AK222430_1(AK222430|pid:none) Ciona intestinalis mRNA for zinc f... 55 1e-06
AC148360_22(AC148360|pid:none) Medicago truncatula clone mth2-27... 55 2e-06
BT034726_1(BT034726|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-06
AM713177_1(AM713177|pid:none) Simian immunodeficiency virus comp... 55 2e-06
CP000585_404(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 55 2e-06
AJ300450_1(AJ300450|pid:none) Human immunodeficiency virus type ... 54 3e-06
AE016816_166(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 54 3e-06
BC150791_1(BC150791|pid:none) Mus musculus zinc finger, CCHC dom... 54 3e-06
AK220327_1(AK220327|pid:none) Mus musculus mRNA for mKIAA0191 pr... 54 3e-06
AJ302646_2(AJ302646|pid:none) Human immunodeficiency virus type ... 54 3e-06
AP007150_228(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 54 3e-06
T45890(T45890)splicing factor-like protein - Arabidopsis thaliana 54 3e-06
AC130807_24(AC130807|pid:none) Medicago truncatula clone mth2-13... 54 3e-06
FJ424863_1(FJ424863|pid:none) Simian immunodeficiency virus isol... 54 3e-06
AK134388_1(AK134388|pid:none) Mus musculus 13 days embryo male t... 54 3e-06
AY840327_1(AY840327|pid:none) HIV-1 isolate vr34gag2a from Viet ... 54 3e-06
AY618998_1(AY618998|pid:none) HIV-1 clone pCMO2.3 from Cameroon,... 54 5e-06
AJ302647_1(AJ302647|pid:none) Human immunodeficiency virus type ... 54 5e-06
FJ424864_1(FJ424864|pid:none) Simian immunodeficiency virus isol... 54 5e-06
(P27978) RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; C... 54 5e-06
FJ424871_1(FJ424871|pid:none) Simian immunodeficiency virus isol... 54 5e-06
AE017341_236(AE017341|pid:none) Cryptococcus neoformans var. neo... 47 5e-06
AE017342_455(AE017342|pid:none) Cryptococcus neoformans var. neo... 53 6e-06
FJ199078_1(FJ199078|pid:none) HIV-1 isolate SK233 from South Afr... 53 6e-06
AY169808_1(AY169808|pid:none) HIV-1 isolate 98CMU5337 from Camer... 53 6e-06
(Q79666) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G... 53 6e-06
AY803360_1(AY803360|pid:none) HIV-1 isolate 03-3996NM from Ugand... 53 6e-06
BC157401_1(BC157401|pid:none) Xenopus laevis hypothetical protei... 52 8e-06
AF484503_2(AF484503|pid:none) HIV-1 isolate 98UG57129 from Ugand... 53 8e-06
EU966775_1(EU966775|pid:none) Zea mays clone 297297 glycine-rich... 53 8e-06
AL626783_2(AL626783|pid:none) Mouse DNA sequence from clone RP23... 53 8e-06
AY248427_1(AY248427|pid:none) HIV-1 isolate 01SP7997 gag-pol pol... 53 8e-06
AM933532_1(AM933532|pid:none) Human immunodeficiency virus 1 par... 53 8e-06
GQ259890_1(GQ259890|pid:none) Haliotis asinina vasa-like protein... 53 8e-06
AC147712_10(AC147712|pid:none) Medicago truncatula clone mth2-34... 53 8e-06
EU446022_1(EU446022|pid:none) HIV-1 isolate MVP-30846, complete ... 53 8e-06
U58991_1(U58991|pid:none) Simian immunodeficiency virus - agm.ta... 53 8e-06
AY523865_1(AY523865|pid:none) Simian immunodeficiency virus stra... 53 8e-06
EU971384_1(EU971384|pid:none) Zea mays clone 363461 glycine-rich... 53 8e-06
EF495062_1(EF495062|pid:none) HIV-1 isolate 06MMYKLD46 from Mala... 53 8e-06
AF484503_1(AF484503|pid:none) HIV-1 isolate 98UG57129 from Ugand... 53 8e-06
EU954471_1(EU954471|pid:none) Zea mays clone 1468419 glycine-ric... 53 8e-06
DQ445632_1(DQ445632|pid:none) HIV-1 isolate 03ZAPS105MB2 from So... 52 1e-05
AL590450_65(AL590450|pid:none) chromosome XI of strain GB-M1 of ... 52 1e-05
EU242323_1(EU242323|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 52 1e-05
AY169806_1(AY169806|pid:none) HIV-1 isolate 96CMABB009 from Came... 52 1e-05
AM937062_1(AM937062|pid:none) SIV-wrc Pbt-05GM-X02 virus provira... 52 1e-05
DQ973520_1(DQ973520|pid:none) HIV-2 isolate NIM-9 from India gag... 52 1e-05
AJ549283_1(AJ549283|pid:none) Simian immunodeficiency virus SIVm... 52 1e-05
FJ198745_1(FJ198745|pid:none) HIV-1 isolate PS104 from South Afr... 52 1e-05
AY095996_1(AY095996|pid:none) Arabidopsis thaliana AT3g53500/F4P... 52 1e-05
AY655744_1(AY655744|pid:none) Simian immunodeficiency virus stra... 48 1e-05
FJ667232_1(FJ667232|pid:none) HIV-1 isolate AU01 from Australia ... 52 1e-05
AY304942_1(AY304942|pid:none) HIV-1 isolate 00ET657.159.249 gag ... 52 1e-05
AY803400_1(AY803400|pid:none) HIV-1 isolate TC023504 from Uganda... 52 1e-05
AC124213_1(AC124213|pid:none) Genomic sequence for Oryza sativa,... 52 1e-05
(P27973) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G... 52 1e-05
AY169809_1(AY169809|pid:none) HIV-1 isolate 97CMABB497 from Came... 52 1e-05
AY304938_1(AY304938|pid:none) HIV-1 isolate 00ET657.159.23 gag p... 52 1e-05
AF484479_2(AF484479|pid:none) HIV-1 isolate 99UGC06443 from Ugan... 52 1e-05
AC092748_10(AC092748|pid:none) Genomic sequence for Oryza sativa... 52 1e-05
AY255814_1(AY255814|pid:none) HIV-1 isolate 00ET657.159.13 from ... 52 1e-05
AF484479_1(AF484479|pid:none) HIV-1 isolate 99UGC06443 from Ugan... 52 1e-05
AY169805_1(AY169805|pid:none) HIV-1 isolate 97US08692A from USA,... 52 1e-05
AY304936_1(AY304936|pid:none) HIV-1 isolate 00ET657.159.20 gag p... 52 1e-05
AY169810_1(AY169810|pid:none) HIV-1 isolate 96CMABB637 from Came... 52 1e-05
AY169816_1(AY169816|pid:none) HIV-1 isolate 98CMA105 from Camero... 52 2e-05
AP008207_2329(AP008207|pid:none) Oryza sativa (japonica cultivar... 52 2e-05
EU864057_1(EU864057|pid:none) HIV-1 isolate PARC_CP016GAG from U... 52 2e-05
EU242257_1(EU242257|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 52 2e-05
FJ771006_1(FJ771006|pid:none) HIV-1 isolate 02BR082 from Brazil,... 52 2e-05
AY352275_1(AY352275|pid:none) HIV-1 isolate SF33 from USA, compl... 52 2e-05
FJ387539_1(FJ387539|pid:none) HIV-1 isolate BVC_015 from USA gag... 52 2e-05
EU839597_1(EU839597|pid:none) HIV-1 isolate 05DO.160884 from Dom... 52 2e-05
FJ199044_1(FJ199044|pid:none) HIV-1 isolate SK174 from South Afr... 52 2e-05
DQ383751_1(DQ383751|pid:none) HIV-1 isolate 04AR151263 from Arge... 52 2e-05
FJ498036_1(FJ498036|pid:none) HIV-1 isolate B107 from Botswana g... 52 2e-05
EU242294_1(EU242294|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 52 2e-05
EU342808_1(EU342808|pid:none) HIV-1 isolate 06SP42-303556 from S... 52 2e-05
AY206648_1(AY206648|pid:none) HIV-1 from USA patient MDR2 gag pr... 52 2e-05
EF147564_1(EF147564|pid:none) Populus trichocarpa clone WS0123_H... 52 2e-05
AY786814_1(AY786814|pid:none) HIV-1 clone 2BP-1024 from USA gag ... 52 2e-05
EU242273_1(EU242273|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 52 2e-05
AY248431_1(AY248431|pid:none) HIV-1 isolate 02SP00062482 gag-pol... 52 2e-05
EU380650_1(EU380650|pid:none) HIV-1 isolate 0400-1834-P1 from US... 52 2e-05
EF575972_1(EF575972|pid:none) Oryza sativa (indica cultivar-grou... 52 2e-05
EF637057_1(EF637057|pid:none) HIV-1 isolate BREPM1023 from Brazi... 51 2e-05
FJ496168_1(FJ496168|pid:none) HIV-1 isolate WITO_flA2 from USA, ... 51 2e-05
AY901968_1(AY901968|pid:none) HIV-1 isolate 03ZASK061B1 from Sou... 51 2e-05
FJ496182_1(FJ496182|pid:none) HIV-1 isolate WITO_flF4 from USA, ... 51 2e-05
AY945713_1(AY945713|pid:none) HIV-1 isolate 01TH.C1436 from Thai... 51 2e-05
AK176666_1(AK176666|pid:none) Arabidopsis thaliana mRNA, complet... 51 2e-05
FJ498177_1(FJ498177|pid:none) HIV-1 isolate B298 from Botswana g... 51 2e-05
FJ667217_1(FJ667217|pid:none) HIV-1 isolate AC125 from USA gag p... 51 2e-05
FJ155201_1(FJ155201|pid:none) HIV-1 isolate 2005-12 from Argenti... 51 2e-05
FJ195088_1(FJ195088|pid:none) HIV-1 isolate BREPM1084 from Brazi... 51 2e-05
FJ387534_1(FJ387534|pid:none) HIV-1 isolate BVC_008 from USA gag... 51 2e-05
EF122502_1(EF122502|pid:none) HIV-1 isolate 04CNLN124 from China... 51 2e-05
AC005693_2(AC005693|pid:none) Arabidopsis thaliana chromosome 2 ... 51 2e-05
EF163464_1(EF163464|pid:none) HIV-1 isolate ML1598-11.10.95(2) f... 51 2e-05
AJ437035_1(AJ437035|pid:none) Human immunodeficiency virus type ... 51 2e-05
FJ496167_1(FJ496167|pid:none) HIV-1 isolate WITO_flA1 from USA, ... 51 2e-05
DQ168574_1(DQ168574|pid:none) HIV-1 isolate 01NGPL0209P from Nig... 51 2e-05
EF122585_1(EF122585|pid:none) HIV-1 isolate 04CNLN121 from China... 51 2e-05
EF116309_1(EF116309|pid:none) HIV-1 isolate 129.1 from Australia... 51 2e-05
AF349680_1(AF349680|pid:none) Simian immunodeficiency virus stra... 51 2e-05
EU242258_1(EU242258|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 51 2e-05
FJ667225_1(FJ667225|pid:none) HIV-1 isolate AC41_Day1 from USA g... 51 2e-05
EU242238_1(EU242238|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 51 2e-05
FJ469753_1(FJ469753|pid:none) HIV-1 isolate PRLS01 from USA gag ... 51 2e-05
AY840294_1(AY840294|pid:none) HIV-1 isolate vr25gag2a from Viet ... 51 2e-05
EU342804_1(EU342804|pid:none) HIV-1 isolate 06SP29-334408 from S... 51 2e-05
DQ374658_1(DQ374658|pid:none) Simian immunodeficiency virus clon... 51 2e-05
EF164026_1(EF164026|pid:none) HIV-1 isolate ML2086-18.9.02 from ... 51 2e-05
FJ496178_1(FJ496178|pid:none) HIV-1 isolate WITO_flE11 from USA,... 51 2e-05
FJ469689_1(FJ469689|pid:none) HIV-1 isolate CR0027M from USA gag... 51 2e-05
(Q9P795) RecName: Full=Protein air1; &AL163702_8(AL163702|pid:n... 51 2e-05
FJ667209_1(FJ667209|pid:none) HIV-1 isolate A-02 from Australia ... 51 2e-05
L11786_1(L11786|pid:none) Human immunodeficiency virus type 1 ga... 51 2e-05
AB253430_1(AB253430|pid:none) Human immunodeficiency virus 1 pro... 51 2e-05
FJ198966_1(FJ198966|pid:none) HIV-1 isolate SK058 from South Afr... 51 2e-05
AK176551_1(AK176551|pid:none) Arabidopsis thaliana mRNA, complet... 51 2e-05
AY255821_1(AY255821|pid:none) HIV-1 isolate 00ET695.157.279 from... 51 3e-05
EU927369_1(EU927369|pid:none) HIV-1 from United Kingdom gag prot... 51 3e-05
U95965_1(U95965|pid:none) Simian immunodeficiency virus Gag poly... 51 3e-05
AY008718_1(AY008718|pid:none) HIV-1 isolate 97CNGX-11F from Chin... 51 3e-05
EU242408_1(EU242408|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 51 3e-05
(P12451) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G... 51 3e-05
AY727522_1(AY727522|pid:none) HIV-1 isolate 04BR013 from Brazil ... 51 3e-05
AF516184_1(AF516184|pid:none) HIV-1 isolate CRF01_AE/B from Thai... 51 3e-05
EU242067_1(EU242067|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 51 3e-05
EU242004_1(EU242004|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 51 3e-05
CP000081_295(CP000081|pid:none) Leishmania major chromosome 35, ... 51 3e-05
FJ198944_1(FJ198944|pid:none) HIV-1 isolate SK016 from South Afr... 51 3e-05
FJ198942_1(FJ198942|pid:none) HIV-1 isolate SK013 from South Afr... 51 3e-05
EF029069_1(EF029069|pid:none) HIV-1 isolate U.NL.01.H10986_C11 f... 51 3e-05
EU864069_1(EU864069|pid:none) HIV-1 isolate PARC_CP028GAG from U... 51 3e-05
AB287366_1(AB287366|pid:none) Human immunodeficiency virus 1 pro... 51 3e-05
EU347689_1(EU347689|pid:none) HIV-1 isolate CAP084_3_08 from Sou... 51 3e-05
AY169807_1(AY169807|pid:none) HIV-1 isolate 98CMABB141 from Came... 51 3e-05
(P12450) RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; C... 51 3e-05
FJ388960_1(FJ388960|pid:none) HIV-1 isolate CY070 from Cyprus ga... 51 3e-05
AB286956_1(AB286956|pid:none) Human immunodeficiency virus 1 pro... 51 3e-05
AB286955_1(AB286955|pid:none) Human immunodeficiency virus 1 pro... 51 3e-05
AY008714_1(AY008714|pid:none) HIV-1 isolate 97CNGX-2F from China... 51 3e-05
EF163465_1(EF163465|pid:none) HIV-1 isolate ML1598-11.10.95(3) f... 51 3e-05
FJ853511_1(FJ853511|pid:none) HIV-1 isolate H041 from Tanzania g... 51 3e-05
EU380658_1(EU380658|pid:none) HIV-1 isolate 1099-4334-P2 from US... 51 3e-05
EF116404_1(EF116404|pid:none) HIV-1 isolate 33.1 from Australia ... 51 3e-05
FJ234110_1(FJ234110|pid:none) HIV-1 isolate 06.RU.SP163 from Rus... 51 3e-05
AB078942_1(AB078942|pid:none) Forficula scudderi non-LTR retrotr... 51 3e-05
EF028161_1(EF028161|pid:none) Boltenia villosa vasa protein mRNA... 51 3e-05
EF091932_1(EF091932|pid:none) HIV-1 isolate 110PA from Brazil, c... 50 4e-05
DQ792987_1(DQ792987|pid:none) HIV-1 isolate 01MW525298 from Mala... 50 4e-05
EU242073_1(EU242073|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 4e-05
AB070352_2(AB070352|pid:none) Human immunodeficiency virus 1 gen... 50 4e-05
D83776_1(D83776|pid:none) Human mRNA for KIAA0191 gene, partial ... 50 4e-05
EU517781_1(EU517781|pid:none) HIV-1 isolate BEC57 from USA gag p... 50 4e-05
AF349681_1(AF349681|pid:none) Simian immunodeficiency virus stra... 50 4e-05
EU448295_1(EU448295|pid:none) HIV-1 strain 04FR-AUK from France,... 50 4e-05
EF637054_1(EF637054|pid:none) HIV-1 isolate BREPM1027 from Brazi... 50 4e-05
AY140561_1(AY140561|pid:none) HIV-1 isolate 97CIRMF44 from Gabon... 50 4e-05
AY165239_1(AY165239|pid:none) HIV-1 isolate 00SE-19889 from Swed... 50 4e-05
(Q5TAX3) RecName: Full=Zinc finger CCHC domain-containing protei... 50 4e-05
AY455781_1(AY455781|pid:none) HIV-1 isolate 94BR-RJ-41 from Braz... 50 4e-05
EF122504_1(EF122504|pid:none) HIV-1 isolate 04CNLN130 from China... 50 4e-05
FJ198978_1(FJ198978|pid:none) HIV-1 isolate SK078 from South Afr... 50 4e-05
EU342793_1(EU342793|pid:none) HIV-1 isolate 06SP9-311317 from Sp... 50 4e-05
FJ498023_1(FJ498023|pid:none) HIV-1 isolate B085 from Botswana g... 50 4e-05
DQ366663_1(DQ366663|pid:none) HIV-1 isolate 04MYKL016.1 from Mal... 50 4e-05
EU347698_1(EU347698|pid:none) HIV-1 isolate CAP210_2_05 from Sou... 50 4e-05
EF163814_1(EF163814|pid:none) HIV-1 isolate ML2003-13.11.03 from... 50 4e-05
AY772953_1(AY772953|pid:none) HIV-1 clone M104gag from Kenya gag... 50 4e-05
EU117992_1(EU117992|pid:none) Feline immunodeficiency virus isol... 50 4e-05
EU347697_1(EU347697|pid:none) HIV-1 isolate CAP210_2_00 from Sou... 50 4e-05
AF184365_1(AF184365|pid:none) HIV-1 isolate CMgp854 from Cameroo... 50 4e-05
AY358068_1(AY358068|pid:none) HIV-1 01TH.OUR788I from Thailand g... 50 4e-05
AY304934_1(AY304934|pid:none) HIV-1 isolate 00ET657.159.17 gag p... 50 4e-05
EU347699_1(EU347699|pid:none) HIV-1 isolate CAP210_3_10 from Sou... 50 4e-05
EU673444_1(EU673444|pid:none) HIV-1 isolate CY176 from Cyprus ga... 50 4e-05
AB032740_1(AB032740|pid:none) Human immunodeficiency virus 1 pro... 50 4e-05
AY779561_1(AY779561|pid:none) HIV-1 isolate CANC5FULL from Canad... 50 4e-05
FJ211808_1(FJ211808|pid:none) HIV-1 isolate 147600-M32(2-1-06)RN... 50 4e-05
AY371136_1(AY371136|pid:none) HIV-1 isolate 01CM.1237NG from Cam... 50 4e-05
FJ498164_1(FJ498164|pid:none) HIV-1 isolate B279 from Botswana g... 50 4e-05
AB070352_1(AB070352|pid:none) Human immunodeficiency virus 1 gen... 50 4e-05
AY484421_1(AY484421|pid:none) HIV-1 isolate NARI-GAG-3 from Indi... 50 4e-05
L11760_1(L11760|pid:none) Human immunodeficiency virus type 1 ga... 50 4e-05
EF122554_1(EF122554|pid:none) HIV-1 isolate 03CNLN59 from China ... 50 4e-05
FJ387531_1(FJ387531|pid:none) HIV-1 isolate BVC_005 from USA gag... 50 4e-05
EU242274_1(EU242274|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 4e-05
(Q12476) RecName: Full=Protein AIR2; AltName: Full=Arginine meth... 50 5e-05
AY492773_1(AY492773|pid:none) HIV-1 isolate 00KE553 from Kenya g... 50 5e-05
EU342792_1(EU342792|pid:none) HIV-1 isolate 06SP8-310227 from Sp... 50 5e-05
AY803381_1(AY803381|pid:none) HIV-1 isolate 03-9270NM from Ugand... 50 5e-05
AY840334_1(AY840334|pid:none) HIV-1 isolate vr36gag1b from Viet ... 50 5e-05
DQ859179_1(DQ859179|pid:none) HIV-1 isolate FJ053 from China, co... 50 5e-05
FJ667241_1(FJ667241|pid:none) HIV-1 isolate B-06 from Germany ga... 50 5e-05
EU241957_1(EU241957|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
AY945730_1(AY945730|pid:none) HIV-1 isolate 01TH.R2184 from Thai... 50 5e-05
AF184414_1(AF184414|pid:none) HIV-1 isolate CMgp1662 from Camero... 50 5e-05
AY173960_1(AY173960|pid:none) HIV-1 isolate EC102 from Ecuador g... 50 5e-05
FJ498074_1(FJ498074|pid:none) HIV-1 isolate B159 from Botswana g... 50 5e-05
AF184466_1(AF184466|pid:none) HIV-1 isolate CMgp1728 from Camero... 50 5e-05
EU242235_1(EU242235|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
FJ155202_1(FJ155202|pid:none) HIV-1 isolate 2006-01 from Argenti... 50 5e-05
EU242503_1(EU242503|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
U09568_1(U09568|pid:none) Lymphoproliferative disease virus of M... 50 5e-05
AY786844_1(AY786844|pid:none) HIV-1 clone 2P-1031 from USA gag p... 50 5e-05
AY838597_1(AY838597|pid:none) HIV-1 isolate 2013M from South Afr... 50 5e-05
AM933538_1(AM933538|pid:none) Human immunodeficiency virus 1 par... 50 5e-05
AK060171_1(AK060171|pid:none) Oryza sativa Japonica Group cDNA c... 50 5e-05
AY371165_1(AY371165|pid:none) HIV-1 isolate 02CM.1867LE from Cam... 50 5e-05
FJ155142_1(FJ155142|pid:none) HIV-1 isolate 2000-11 from Argenti... 50 5e-05
AY751406_1(AY751406|pid:none) HIV-1 isolate 04RU129005 from Russ... 50 5e-05
EF680846_1(EF680846|pid:none) HIV-1 isolate pl24 from Peru gag p... 50 5e-05
FJ155183_1(FJ155183|pid:none) HIV-1 isolate 2004-07 from Argenti... 50 5e-05
AY835757_1(AY835757|pid:none) HIV-1 isolate 5113-86 clone pbf12 ... 50 5e-05
EF163469_1(EF163469|pid:none) HIV-1 isolate ML1598-16.11.95(3) f... 50 5e-05
DQ314732_1(DQ314732|pid:none) HIV-1 isolate 01AETH04BKM from Tha... 50 5e-05
EU242473_1(EU242473|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
EF680850_1(EF680850|pid:none) HIV-1 isolate pl40 from Peru gag p... 50 5e-05
EF063180_1(EF063180|pid:none) HIV-1 isolate 2002_2741 from Russi... 50 5e-05
(P05893) RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; C... 50 5e-05
AF069673_1(AF069673|pid:none) HIV-1 isolate SE8891 from Uganda, ... 50 5e-05
EF575728_1(EF575728|pid:none) Oryza sativa (indica cultivar-grou... 50 5e-05
AB026661_9(AB026661|pid:none) Arabidopsis thaliana genomic DNA, ... 50 5e-05
AM933530_1(AM933530|pid:none) Human immunodeficiency virus 1 par... 50 5e-05
AF484497_2(AF484497|pid:none) HIV-1 isolate 99UGJ27597 from Ugan... 50 5e-05
AY786848_1(AY786848|pid:none) HIV-1 clone 8P-1031 from USA gag p... 50 5e-05
AY835758_1(AY835758|pid:none) HIV-1 isolate 5113-87 clone pbf13 ... 50 5e-05
EU242430_1(EU242430|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
AY037267_1(AY037267|pid:none) HIV-1 isolate ARCH003 from Argenti... 50 5e-05
AY492759_1(AY492759|pid:none) HIV-1 isolate 97KE173 from Kenya g... 50 5e-05
AY795905_1(AY795905|pid:none) HIV-1 isolate 02YE508 from Yemen g... 50 5e-05
AY248454_1(AY248454|pid:none) HIV-1 isolate 02SP00071101 gag-pol... 50 5e-05
FJ667245_1(FJ667245|pid:none) HIV-1 isolate B-10 from Germany ga... 50 5e-05
AY371149_1(AY371149|pid:none) HIV-1 isolate 01CM.0186ND from Cam... 50 5e-05
AY753758_1(AY753758|pid:none) HIV-1 isolate 04TZ_HS507Ag19 from ... 50 5e-05
EF163290_1(EF163290|pid:none) HIV-1 isolate ML1464-10.11.95b fro... 50 5e-05
FJ155205_1(FJ155205|pid:none) HIV-1 isolate 2006-04 from Argenti... 50 5e-05
AY561236_1(AY561236|pid:none) HIV-1 isolate PCM001 from Colombia... 50 5e-05
EF036529_1(EF036529|pid:none) HIV-1 isolate Fj056 from China, co... 50 5e-05
U54771_1(U54771|pid:none) Human immunodeficiency virus type 1, s... 50 5e-05
AF095843_1(AF095843|pid:none) Entosiphon sulcatum unknown mRNA, ... 50 5e-05
AF484497_1(AF484497|pid:none) HIV-1 isolate 99UGJ27597 from Ugan... 50 5e-05
AB468574_1(AB468574|pid:none) Human immunodeficiency virus 1 pol... 50 5e-05
EF122563_1(EF122563|pid:none) HIV-1 isolate 00CNLN13 from China ... 50 5e-05
AY786843_1(AY786843|pid:none) HIV-1 clone 12P-1031 from USA gag ... 50 5e-05
FJ155190_1(FJ155190|pid:none) HIV-1 isolate 2005-01 from Argenti... 50 5e-05
DQ833414_1(DQ833414|pid:none) HIV-1 isolate 05CNHB_dw16 from Chi... 50 5e-05
AY786842_1(AY786842|pid:none) HIV-1 clone 5P-1031 from USA gag p... 50 5e-05
DQ396392_1(DQ396392|pid:none) HIV-1 isolate 03ZAPS151MB1 from So... 50 5e-05
(B1WC15) RecName: Full=Zinc finger CCHC domain-containing protei... 50 5e-05
EF163623_1(EF163623|pid:none) HIV-1 isolate ML639-21.5.87(2) fro... 50 5e-05
AY786840_1(AY786840|pid:none) HIV-1 clone 7P-1031 from USA gag p... 50 5e-05
AY786845_1(AY786845|pid:none) HIV-1 clone 3P-1031 from USA gag p... 50 5e-05
AY444804_1(AY444804|pid:none) HIV-1 isolate 00US.MSC1164 from US... 50 5e-05
EF122561_1(EF122561|pid:none) HIV-1 isolate 01CNLN15 from China ... 50 5e-05
EU698414_1(EU698414|pid:none) HIV-1 isolate 20750SASA3912XXxxxxx... 50 5e-05
AY772985_1(AY772985|pid:none) HIV-1 clone M439gag from Kenya gag... 50 5e-05
EF122518_1(EF122518|pid:none) HIV-1 isolate 02CNLN27 from China ... 50 5e-05
FJ469710_1(FJ469710|pid:none) HIV-1 isolate CR0228Q from USA gag... 50 5e-05
EU242252_1(EU242252|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
(Q77373) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G... 50 5e-05
AY586541_1(AY586541|pid:none) HIV-1 isolate CU14 from Cuba, comp... 50 5e-05
EF514704_1(EF514704|pid:none) HIV-1 isolate CTL 016 from Denmark... 50 5e-05
FJ198785_1(FJ198785|pid:none) HIV-1 isolate PS150 from South Afr... 50 5e-05
EU242066_1(EU242066|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 5e-05
AF184368_1(AF184368|pid:none) HIV-1 isolate CMgp15 from Cameroon... 50 5e-05
EF163793_1(EF163793|pid:none) HIV-1 isolate ML1748-25.6.03(2) fr... 50 5e-05
AY017370_1(AY017370|pid:none) Cryptosporidium parvum Cp22.4.1 pr... 50 5e-05
AY786849_1(AY786849|pid:none) HIV-1 clone 6P-1031 from USA gag p... 50 5e-05
EF163634_1(EF163634|pid:none) HIV-1 isolate ML681-22.11.95 from ... 50 5e-05
FJ155131_1(FJ155131|pid:none) HIV-1 isolate 1999-14 from Argenti... 50 5e-05
(Q77372) RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; C... 50 5e-05
AF322109_1(AF322109|pid:none) Caprine arthritis-encephalitis vir... 50 5e-05
AF184489_1(AF184489|pid:none) HIV-1 isolate KEgp116 from Kenya g... 50 5e-05
AY248394_1(AY248394|pid:none) HIV-1 isolate 02SP1014877 gag prot... 50 5e-05
DQ314731_1(DQ314731|pid:none) HIV-1 isolate 01AETH04BKD from Tha... 50 5e-05
AF484487_2(AF484487|pid:none) HIV-1 isolate 99UGE08364 from Ugan... 50 5e-05
AF184571_1(AF184571|pid:none) HIV-1 isolate ZMgp1572 from Zambia... 50 5e-05
AF484508_2(AF484508|pid:none) HIV-1 isolate 98UG57135 from Ugand... 50 7e-05
AY900573_1(AY900573|pid:none) HIV-1 isolate CB418 from Cuba gag ... 50 7e-05
AF484508_1(AF484508|pid:none) HIV-1 isolate 98UG57135 from Ugand... 50 7e-05
EU242202_1(EU242202|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 7e-05
FJ388901_1(FJ388901|pid:none) HIV-1 isolate CY040 from Cyprus ga... 50 7e-05
AM933542_1(AM933542|pid:none) Human immunodeficiency virus 1 par... 50 7e-05
AY786829_1(AY786829|pid:none) HIV-1 clone 1CP-1024 from USA gag ... 50 7e-05
(P24107) RecName: Full=Gag-Pol polyprotein; AltName: Full=Pr160G... 50 7e-05
AY703910_1(AY703910|pid:none) HIV-1 isolate 04ZASK143B1 from Sou... 50 7e-05
AY304918_1(AY304918|pid:none) HIV-1 isolate 00ET701.152.226 gag ... 50 7e-05
AY786813_1(AY786813|pid:none) HIV-1 clone 3BP-1024 from USA gag ... 50 7e-05
AF457079_1(AF457079|pid:none) HIV-1 isolate 00KE_KSM4030 from Ke... 50 7e-05
AF076243_2(AF076243|pid:none) Arabidopsis thaliana BAC T26N6 fro... 50 7e-05
AY169813_1(AY169813|pid:none) HIV-1 isolate 97CMABB447 from Came... 50 7e-05
EU110093_1(EU110093|pid:none) HIV-1 isolate ML2000 from Kenya, c... 50 7e-05
AY535661_1(AY535661|pid:none) HIV-1 isolate at10 from Estonia ga... 50 7e-05
EU242065_1(EU242065|pid:none) HIV-1 isolate BCCFE_HOMER_HIV_GAG_... 50 7e-05
AY779563_1(AY779563|pid:none) HIV-1 isolate CANC8FULL from Canad... 50 7e-05
AY901969_1(AY901969|pid:none) HIV-1 isolate 03ZASK066B1 from Sou... 50 7e-05
U86776_1(U86776|pid:none) HIV-1 clone ZAM184-5.2 from Zambia, ga... 50 7e-05
DQ295195_1(DQ295195|pid:none) HIV-1 isolate 04KJin8-1955 from So... 50 7e-05
AY535728_1(AY535728|pid:none) HIV-1 isolate TV10 from Estonia ga... 50 7e-05
AY535764_1(AY535764|pid:none) HIV-1 isolate TV77 from Estonia ga... 50 7e-05
EF457187_1(EF457187|pid:none) HIV-1 isolate 11_m33_c1 from USA g... 50 7e-05
AY779557_1(AY779557|pid:none) HIV-1 isolate CANC10FULL from Cana... 50 7e-05
EU110094_1(EU110094|pid:none) HIV-1 isolate ML2014 from Kenya, c... 50 7e-05
U29262_1(U29262|pid:none) Human immunodeficiency virus type 1 ga... 50 7e-05
AY358048_1(AY358048|pid:none) HIV-1 99TH.OUR203I from Thailand g... 50 7e-05
AY253316_1(AY253316|pid:none) HIV-1 isolate 01TZA387 from Tanzan... 50 7e-05
AY755223_1(AY755223|pid:none) HIV-1 isolate EST2001-1271 from Es... 50 7e-05
AY803370_1(AY803370|pid:none) HIV-1 isolate 03-9073NR from Ugand... 50 7e-05
EF063223_1(EF063223|pid:none) HIV-1 isolate 2002_2854 from Russi... 50 7e-05
AF367411_1(AF367411|pid:none) Simian immunodeficiency virus 2 is... 50 7e-05
(O91079) RecName: Full=Gag polyprotein; AltName: Full=Pr55Gag; C... 50 7e-05
AY772975_1(AY772975|pid:none) HIV-1 clone M389_clone22 from Keny... 50 7e-05
DQ366662_1(DQ366662|pid:none) HIV-1 isolate 05MYKL045.1 from Mal... 50 7e-05
AY786828_1(AY786828|pid:none) HIV-1 clone 7CP-1024 from USA gag ... 50 7e-05
FJ198970_1(FJ198970|pid:none) HIV-1 isolate SK065 from South Afr... 50 7e-05
EU787513_1(EU787513|pid:none) HIV-1 isolate AE-Gag47-1 from Thai... 50 7e-05
AY779558_1(AY779558|pid:none) HIV-1 isolate CAN11FULL from Canad... 50 7e-05
AY803402_1(AY803402|pid:none) HIV-1 isolate TC025104 from Uganda... 50 7e-05
FJ469694_1(FJ469694|pid:none) HIV-1 isolate CR0059T from USA gag... 50 7e-05
U29257_1(U29257|pid:none) Human immunodeficiency virus type 1 ga... 50 7e-05
AF484507_2(AF484507|pid:none) HIV-1 isolate 98UG57134 from Ugand... 50 7e-05
AY753775_1(AY753775|pid:none) HIV-1 isolate 04TZ_HS507Bg13 from ... 50 7e-05
FJ234142_1(FJ234142|pid:none) HIV-1 isolate 06.RU.SP428 from Rus... 50 7e-05
FJ199008_1(FJ199008|pid:none) HIV-1 isolate SK132 from South Afr... 50 7e-05
U86780_1(U86780|pid:none) HIV-1 clone ZAM184-5.6 from Zambia, co... 50 7e-05
AB220944_1(AB220944|pid:none) Human immunodeficiency virus 1 pro... 50 7e-05
AY358066_1(AY358066|pid:none) HIV-1 00TH.OUR200I from Thailand g... 50 7e-05
DQ083238_1(DQ083238|pid:none) HIV-1 isolate 1579A from India, co... 50 7e-05
L11773_1(L11773|pid:none) Human immunodeficiency virus type 1 ga... 50 7e-05
>AM270155_34(AM270155|pid:none) Aspergillus niger contig An07c0380,
complete genome.
Length = 171
Score = 108 bits (269), Expect(2) = 4e-26
Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
Frame = +2
Query: 65 KEKSCYKCKEVGHISRNCPKNP-------EAGDRACYVCNVVGHLSRECPQNP--QPTFE 217
KEKSCY+C VGHISR C +P G + CY C VGH++R CPQ+ F
Sbjct: 49 KEKSCYRCGGVGHISRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCPQSGGYSGGFG 108
Query: 218 KKDPIKCYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQGS*CC 379
+ CY C GFGH ARDC G+ KCYNCG +GH+S+DCP T +G C
Sbjct: 109 GRQQ-TCYSCGGFGHMARDCTNGQ--KCYNCGEVGHVSRDCP---TEAKGERVC 156
Score = 32.7 bits (73), Expect(2) = 4e-26
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 357 EVKGRDAAKCYKCNQPGHIAKACP 428
E KG CY C QPGH+ ACP
Sbjct: 149 EAKGERV--CYNCKQPGHVQAACP 170
Score = 80.5 bits (197), Expect(2) = 8e-17
Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Frame = +2
Query: 71 KSCYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCN 250
+ C+ C + H +R+CPK G CY C GH+SREC P+ EK CY+C
Sbjct: 8 RGCFNCGDASHQARDCPKK---GTPTCYNCGGQGHVSRECTVAPK---EK----SCYRCG 57
Query: 251 GFGHFARDCR----------RGRDNKCYNCGGLGHISKDCP 343
G GH +R+C+ G +CY CG +GHI+++CP
Sbjct: 58 GVGHISRECQASPAEGFGAAAGGGQECYKCGRVGHIARNCP 98
Score = 29.3 bits (64), Expect(2) = 8e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 381 KCYKCNQPGHIAKACP 428
KCY C + GH+++ CP
Sbjct: 132 KCYNCGEVGHVSRDCP 147
Score = 73.6 bits (179), Expect(2) = 3e-13
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 131 EAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGFGHFARDCR-RGRDNKCYN 307
+AG R C+ C H +R+CP+ PT CY C G GH +R+C ++ CY
Sbjct: 4 QAGGRGCFNCGDASHQARDCPKKGTPT--------CYNCGGQGHVSRECTVAPKEKSCYR 55
Query: 308 CGGLGHISKDCPSPSTRGQGS 370
CGG+GHIS++C + G G+
Sbjct: 56 CGGVGHISRECQASPAEGFGA 76
Score = 24.3 bits (51), Expect(2) = 3e-13
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 384 CYKCNQPGHIAKACPENQ 437
CY C GH+A+ C Q
Sbjct: 114 CYSCGGFGHMARDCTNGQ 131
Score = 52.0 bits (123), Expect = 1e-05
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2
Query: 71 KSCYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECP 193
+ CY C EVGH+SR+CP + G+R CY C GH+ CP
Sbjct: 131 QKCYNCGEVGHVSRDCPTEAK-GERVCYNCKQPGHVQAACP 170
Score = 32.7 bits (73), Expect = 8.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)
Frame = +3
Query: 348 QAPEVKGRDAA-----KCYKCNQPGHIAKACPEN 434
QA +G AA +CYKC + GHIA+ CP++
Sbjct: 67 QASPAEGFGAAAGGGQECYKCGRVGHIARNCPQS 100
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 1,028,886,449
Number of extensions: 20717974
Number of successful extensions: 126623
Number of sequences better than 10.0: 6420
Number of HSP's gapped: 112539
Number of HSP's successfully gapped: 22547
Length of query: 202
Length of database: 1,061,185,681
Length adjustment: 122
Effective length of query: 80
Effective length of database: 662,435,025
Effective search space: 52994802000
Effective search space used: 52994802000
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
3 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |