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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U03947-1
Contig ID Contig-U03947-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U03947-1 (Contig-U03947-1Q) /CSM_Contig/Contig-U03947-1Q.Seq.d
GGTGATGAAACCGATTCAACAATATGACCATCGTCATCATCATCATTATC
ATCTAAACAAGCAAGAAAGAAAACAAAACAACAACAAAAAGAAGAGAAAA
GAAAAGAAAAAGAAGAAAAAGAACAACGTGAACGTGAAGAGAAAAAACAA
AGAGATGAACAATTGGAATTGGAAAGATTGGAAAAGTTAAAGAAAGAAAA
AGAAGATGCTGAACAACGTGAACGTGAAGAAAAAGAAAAACAAAAACAAA
TGGAAATCGATCGTATCGAAAGACAATTAAAAGATGAGAAGGAGAGAAAA
GAACAAGAACATGAAAAGAAACAACAATTAGAATTGGAAAGACACCAGAA
AGAAGAGAAAGAAAGAAAAGATAAAGAAAAGAGAAGACAAGAAAGAGAAA
GAAGAGAAGAGTCATTACGTTATCAAATTGAATTGGAAAGAAAAGAAAGA
GAACAACGTGAAAAACAATTGGAAAAAGAATTA
Gap no gap
Contig length 483
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 2054682
End point 2055165
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U03947
List of clone(s) 

est1=SLD269E,1,484
Translated Amino Acid sequence 
gdetdsti*PSSSSSLSSKQARKKTKQQQKEEKRKEKEEKEQREREEKKQRDEQLELERL
EKLKKEKEDAEQREREEKEKQKQMEIDRIERQLKDEKERKEQEHEKKQQLELERHQKEEK
ERKDKEKRRQERERREESLRYQIELERKEREQREKQLEKEL
Translated Amino Acid sequence (All Frames) 
Frame A:
gdetdsti*PSSSSSLSSKQARKKTKQQQKEEKRKEKEEKEQREREEKKQRDEQLELERL
EKLKKEKEDAEQREREEKEKQKQMEIDRIERQLKDEKERKEQEHEKKQQLELERHQKEEK
ERKDKEKRRQERERREESLRYQIELERKEREQREKQLEKEL


Frame B:
vmkpiqqydhrhhhhyhlnkqerkqnnnkkkrkekkkkkknnvnvkrknkemnnwnwkdw
ks*rkkkkmlnnvnvkkkknknkwksivskdn*kmrrreknknmkrnnn*nwkdtrkkrk
kekikkredkkekeekshyviklnwkekkennvknnwkkn


Frame C:
**nrfnnmtiviiiiii*tskkenktttkrrekkrkrrkrtt*t*rektkr*tigigkig
kvkerkrrc*tt*t*rkrktktngnrsyrktikr*egekrtrt*kettirigktperrer
kkr*rkektrkrkkrrvitlsn*igkkrkrtt*ktigkri
own update 2004. 6. 9
Homology vs CSM-cDNA 
Query= Contig-U03947-1 (Contig-U03947-1Q)
/CSM_Contig/Contig-U03947-1Q.Seq.d
         (483 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U03947-1 (Contig-U03947-1Q) /CSM_Contig/Conti...   145  5e-35
Contig-U11739-1 (Contig-U11739-1Q) /CSM_Contig/Conti...    48  9e-06
Contig-U11980-1 (Contig-U11980-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U11849-1 (Contig-U11849-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U11038-1 (Contig-U11038-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U10715-1 (Contig-U10715-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U03565-1 (Contig-U03565-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U00081-1 (Contig-U00081-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U14237-1 (Contig-U14237-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U12437-1 (Contig-U12437-1Q) /CSM_Contig/Conti...    40  0.002

>Contig-U03947-1 (Contig-U03947-1Q) /CSM_Contig/Contig-U03947-1Q.Seq.d
          Length = 483

 Score =  145 bits (73), Expect = 5e-35
 Identities = 73/73 (100%)
 Strand = Plus / Plus

                                                                       
Query: 411 gtcattacgttatcaaattgaattggaaagaaaagaaagagaacaacgtgaaaaacaatt 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gtcattacgttatcaaattgaattggaaagaaaagaaagagaacaacgtgaaaaacaatt 470

                        
Query: 471 ggaaaaagaatta 483
           |||||||||||||
Sbjct: 471 ggaaaaagaatta 483


 Score =  125 bits (63), Expect = 5e-29
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                       
Query: 251 tggaaatcgatcgtatcgaaagacaattaaaagatgagaaggagagaaaagaacaagaac 310
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tggaaatcgatcgtatcgaaagacaattaaaagatgagaaggagagaaaagaacaagaac 310

              
Query: 311 atg 313
           |||
Sbjct: 311 atg 313


 Score =  105 bits (53), Expect = 4e-23
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                               
Query: 1  ggtgatgaaaccgattcaacaatatgaccatcgtcatcatcatcattatcatc 53
          |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggtgatgaaaccgattcaacaatatgaccatcgtcatcatcatcattatcatc 53


 Score = 73.8 bits (37), Expect = 2e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 156 tgaacaattggaattggaaagattggaaaagttaaag 192
           |||||||||||||||||||||||||||||||||||||
Sbjct: 156 tgaacaattggaattggaaagattggaaaagttaaag 192


 Score = 32.2 bits (16), Expect = 0.52
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 158 aacaattggaattggaaaga 177
           ||||||| ||||||||||||
Sbjct: 323 aacaattagaattggaaaga 342


 Score = 32.2 bits (16), Expect = 0.52
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 443 aagaaagagaacaacgtgaa 462
           |||||| |||||||||||||
Sbjct: 113 aagaaaaagaacaacgtgaa 132


>Contig-U11739-1 (Contig-U11739-1Q) /CSM_Contig/Contig-U11739-1Q.Seq.d
          Length = 2031

 Score = 48.1 bits (24), Expect = 9e-06
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 26  gaccatcgtcatcatcatcattatcatc 53
           ||||||||||||||||||||| ||||||
Sbjct: 945 gaccatcgtcatcatcatcatcatcatc 918


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                          
Query: 34   tcatcatcatcatt 47
            ||||||||||||||
Sbjct: 1045 tcatcatcatcatt 1032


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                             
Query: 34  tcatcatcatcattatca 51
           ||||||||||||| ||||
Sbjct: 934 tcatcatcatcatcatca 917


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 14/14 (100%)
 Strand = Plus / Minus

                          
Query: 29   catcgtcatcatca 42
            ||||||||||||||
Sbjct: 1104 catcgtcatcatca 1091


>Contig-U11980-1 (Contig-U11980-1Q) /CSM_Contig/Contig-U11980-1Q.Seq.d
          Length = 3598

 Score = 42.1 bits (21), Expect = 5e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 29  catcgtcatcatcatcattatcatc 53
           |||| ||||||||||||||||||||
Sbjct: 451 catcatcatcatcatcattatcatc 427


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2354 catcatcatcatcatcatcatcatc 2378


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2339 catcatcatcatcatcatcatcatc 2363


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2351 catcatcatcatcatcatcatcatc 2375


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2348 catcatcatcatcatcatcatcatc 2372


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2342 catcatcatcatcatcatcatcatc 2366


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2357 catcatcatcatcatcatcatcatc 2381


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2345 catcatcatcatcatcatcatcatc 2369


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2336 catcatcatcatcatcatcatcatc 2360


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 23/25 (92%)
 Strand = Plus / Plus

                                     
Query: 29   catcgtcatcatcatcattatcatc 53
            |||| ||||||||||||| ||||||
Sbjct: 2330 catcttcatcatcatcatcatcatc 2354


 Score = 32.2 bits (16), Expect = 0.52
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 34  tcatcatcatcattatcatc 53
           ||||||||||||| ||||||
Sbjct: 431 tcatcatcatcatcatcatc 412


 Score = 32.2 bits (16), Expect = 0.52
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 34  tcatcatcatcattatcatc 53
           ||||||||||||| ||||||
Sbjct: 458 tcatcatcatcatcatcatc 439


 Score = 32.2 bits (16), Expect = 0.52
 Identities = 19/20 (95%)
 Strand = Plus / Minus

                               
Query: 34  tcatcatcatcattatcatc 53
           ||||||||||||| ||||||
Sbjct: 455 tcatcatcatcatcatcatc 436


 Score = 32.2 bits (16), Expect = 0.52
 Identities = 22/24 (91%)
 Strand = Plus / Minus

                                   
Query: 29  catcgtcatcatcatcattatcat 52
           |||| ||||||||||||| |||||
Sbjct: 457 catcatcatcatcatcatcatcat 434


 Score = 30.2 bits (15), Expect = 2.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                           
Query: 39   atcatcattatcatc 53
            |||||||||||||||
Sbjct: 1345 atcatcattatcatc 1359


 Score = 30.2 bits (15), Expect = 2.1
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                               
Query: 34   tcatcatcatcattatcat 52
            |||||||||||| ||||||
Sbjct: 1355 tcatcatcatcaatatcat 1373


 Score = 30.2 bits (15), Expect = 2.1
 Identities = 21/23 (91%)
 Strand = Plus / Plus

                                   
Query: 29   catcgtcatcatcatcattatca 51
            |||| ||||||||||||| ||||
Sbjct: 2360 catcatcatcatcatcatcatca 2382


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                             
Query: 29  catcgtcatcatcatcat 46
           |||| |||||||||||||
Sbjct: 430 catcatcatcatcatcat 413


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                             
Query: 34  tcatcatcatcattatca 51
           ||||||||||||| ||||
Sbjct: 428 tcatcatcatcatcatca 411


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 17/18 (94%)
 Strand = Plus / Minus

                             
Query: 36  atcatcatcattatcatc 53
           ||||||||||| ||||||
Sbjct: 432 atcatcatcatcatcatc 415


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6508
Number of Sequences: 6905
Number of extensions: 6508
Number of successful extensions: 2090
Number of sequences better than 10.0: 509
length of query: 483
length of database: 5,674,871
effective HSP length: 16
effective length of query: 467
effective length of database: 5,564,391
effective search space: 2598570597
effective search space used: 2598570597
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 6. 9
Homology vs DNA 
Query= Contig-U03947-1 (Contig-U03947-1Q) /CSM_Contig/Contig-U03947-1Q.Seq.d
         (483 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU061118) Dictyostelium discoideum slug cDNA, clone SLD269.      107   4e-19  1
(BV430840) S237P679FF10.T0 PortugueseWaterDog Canis familiar...    54   0.005  1
(AC215987) Homo sapiens chromosome UNK clone ABC13-47488300P...    54   0.005  1
(AC201184) Strongylocentrotus purpuratus clone R3-14O23, WOR...    54   0.005  1
(AC184263) Strongylocentrotus purpuratus clone R3-3015O23, W...    54   0.005  1
(AC181780) Strongylocentrotus purpuratus clone R3-1032L12, W...    54   0.005  1
(AC181464) Strongylocentrotus purpuratus clone R3-51D5, WORK...    54   0.005  1
(AC180045) Strongylocentrotus purpuratus clone R3-25D13, WOR...    54   0.005  1
(AC180025) Strongylocentrotus purpuratus clone R3-3030P3, WO...    54   0.005  1
(AC179572) Strongylocentrotus purpuratus clone R3-8O13, WORK...    54   0.005  1
(AC179128) Strongylocentrotus purpuratus clone R3-1107L16, W...    54   0.005  1
(AC178677) Strongylocentrotus purpuratus clone R3-3007E13, W...    54   0.005  1
(AC177038) Strongylocentrotus purpuratus clone R3-38L2, WORK...    54   0.005  1
(AC176950) Strongylocentrotus purpuratus clone R3-1103L18, W...    54   0.005  1
(AC172376) Strongylocentrotus purpuratus clone R3-1004A11, W...    54   0.005  1
(EY372117) CAXA13837.fwd CAXA Helobdella robusta Subtracted ...    54   0.005  1
(EY372116) CAXA13837.rev CAXA Helobdella robusta Subtracted ...    54   0.005  1
(EY370452) CAXA12921.fwd CAXA Helobdella robusta Subtracted ...    54   0.005  1
(EY370451) CAXA12921.rev CAXA Helobdella robusta Subtracted ...    54   0.005  1
(EY367618) CAXA11351.fwd CAXA Helobdella robusta Subtracted ...    54   0.005  1
(EY367617) CAXA11351.rev CAXA Helobdella robusta Subtracted ...    54   0.005  1
(AC164823) Bos taurus clone CH240-156E4, *** SEQUENCING IN P...    52   0.020  1
(EJ496920) 1095403581274 Global-Ocean-Sampling_GS-28-01-01-1...    52   0.020  1
(AL408448) T3 end of clone AV0AA008F01 of library AV0AA from...    52   0.020  1
(EY337116) CAWY8117.fwd CAWY Helobdella robusta Subtracted E...    52   0.020  1
(EY357884) CAWZ5490.fwd CAWZ Helobdella robusta Primary Late...    36   0.062  2
(CR559931) Zebrafish DNA sequence from clone DKEY-33G10 in l...    50   0.078  1
(CU372909) Mouse DNA sequence from clone DN-39P9 on chromoso...    50   0.078  1
(AL732391) Mouse DNA sequence from clone RP23-364H13 on chro...    50   0.078  1
(AC164005) Mus musculus chromosome 1, clone RP24-312J21, com...    50   0.078  1
(AC158650) Mus musculus 6 BAC RP23-280O4 (Roswell Park Cance...    50   0.078  1
(AC125077) Mus musculus BAC clone RP23-473K6 from chromosome...    50   0.078  1
(AC107673) Mus musculus chromosome 1, clone RP24-263O21, com...    50   0.078  1
(AC099618) Mus musculus chromosome 1, clone RP23-455H15, com...    50   0.078  1
(AC093446) Mus musculus strain 129Sv/CJ7 clone ct7-201l18, c...    50   0.078  1
(AM910985) Plasmodium knowlesi strain H chromosome 3, comple...    50   0.078  1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ...    50   0.078  1
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ...    50   0.078  1
(AC096673) Trypanosoma brucei chromosome 3 clone RPCI93-26J7...    50   0.078  1
(AL139042) Human DNA sequence from clone RP11-459O1 on chrom...    50   0.078  1
(AC109600) Homo sapiens chromosome 16 clone RP11-7O14, compl...    50   0.078  1
(AC026739) Homo sapiens chromosome 5 clone CTD-2580L4, compl...    50   0.078  1
(AC023823) Homo sapiens chromosome 16 clone RP11-163K4, comp...    50   0.078  1
(AC013284) Homo sapiens chromosome 10 clone RP11-13E1, compl...    50   0.078  1
(AC149906) Strongylocentrotus purpuratus clone R3-15L2, WORK...    50   0.078  1
(AC136756) Homo sapiens chromosome 8 clone CTD-2179J14 map 8...    50   0.078  1
(AC131509) Strongylocentrotus purpuratus clone Sp58L24, *** ...    50   0.078  1
(AC127721) Rattus norvegicus clone CH230-25E10, WORKING DRAF...    50   0.078  1
(AC127048) Rattus norvegicus clone CH230-49B16, WORKING DRAF...    50   0.078  1
(AC125806) Rattus norvegicus clone CH230-8L11, WORKING DRAFT...    50   0.078  1
(AC121738) Rattus norvegicus clone CH230-88K16, WORKING DRAF...    50   0.078  1
(AC121664) Rattus norvegicus clone CH230-383I17, WORKING DRA...    50   0.078  1
(AC118163) Rattus norvegicus clone CH230-394C6, WORKING DRAF...    50   0.078  1
(AC114042) Rattus norvegicus clone CH230-187A2, WORKING DRAF...    50   0.078  1
(AC106567) Rattus norvegicus clone CH230-52K15, WORKING DRAF...    50   0.078  1
(CU928250) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.078  1
(AC068063) Homo sapiens clone RP11-57E11, WORKING DRAFT SEQU...    50   0.078  1
(AC201244) Strongylocentrotus purpuratus clone R3-15L1, WORK...    50   0.078  1
(AC184583) Strongylocentrotus purpuratus clone R3-3051I14, W...    50   0.078  1
(AC184195) Strongylocentrotus purpuratus clone R3-3031P6, WO...    50   0.078  1
(AC181373) Strongylocentrotus purpuratus clone R3-49I20, WOR...    50   0.078  1
(AC181155) Strongylocentrotus purpuratus clone R3-16C24, WOR...    50   0.078  1
(AC179917) Strongylocentrotus purpuratus clone R3-1003C21, W...    50   0.078  1
(AC179648) Strongylocentrotus purpuratus clone R3-1024L07, W...    50   0.078  1
(AC178175) Strongylocentrotus purpuratus clone R3-3082B11, W...    50   0.078  1
(AC177165) Strongylocentrotus purpuratus clone R3-4015K01, W...    50   0.078  1
(AC176686) Strongylocentrotus purpuratus clone R3-3088F12, W...    50   0.078  1
(AC176372) Strongylocentrotus purpuratus clone R3-3048J17, W...    50   0.078  1
(AC176097) Strongylocentrotus purpuratus clone R3-24E13, WOR...    50   0.078  1
(AC176003) Strongylocentrotus purpuratus clone R3-3028F18, W...    50   0.078  1
(AC175843) Strongylocentrotus purpuratus clone R3-15M1, WORK...    50   0.078  1
(AC174127) Strongylocentrotus purpuratus clone R3-17M20, WOR...    50   0.078  1
(AC168502) Strongylocentrotus purpuratus clone R3-3117D16, W...    50   0.078  1
(AC168498) Strongylocentrotus purpuratus clone R3-3117E14, W...    50   0.078  1
(AC165566) Bos taurus clone CH240-161I3, WORKING DRAFT SEQUE...    50   0.078  1
(AC163068) Bos taurus clone CH240-124M18, WORKING DRAFT SEQU...    50   0.078  1
(AC021774) Homo sapiens clone RP11-13C18, WORKING DRAFT SEQU...    50   0.078  1
(AC021060) Mus musculus strain C57BL6/J chromosome 6 clone R...    50   0.078  1
(AC010812) Homo sapiens clone RP11-3E9, WORKING DRAFT SEQUEN...    50   0.078  1
(AQ379063) RPCI11-163K4.TJ RPCI-11 Homo sapiens genomic clon...    50   0.078  1
(AQ228371) HS_2014_B2_D05_MR CIT Approved Human Genomic Sper...    50   0.078  1
(AL462023) T. brucei sheared genomic DNA clone 86e05, forwar...    50   0.078  1
(DH653170) Rattus norvegicus DNA, BAC clone: RNB1-196O11, 3'...    50   0.078  1
(DH473161) Monosiga ovata DNA, fosmid clone: MOF-020I09, gen...    50   0.078  1
(CZ957624) 289294 Tomato EcoRI BAC Library Solanum lycopersi...    50   0.078  1
(B66703) CIT-HSP-2014H10.TRB CIT-HSP Homo sapiens genomic cl...    50   0.078  1
(AG404165) Mus musculus molossinus DNA, clone:MSMg01-261O17....    50   0.078  1
(EE474879) BNYS2DCT_UP_019_C04_01MAR2005_028 Brassica napus ...    50   0.078  1
(EE435787) 5ETGS9H_UP_005_F05_12JUN2003_019 Brassica napus 5...    50   0.078  1
(EB848733) 7345733 KZ68 Danio rerio cDNA clone 2790149, mRNA...    50   0.078  1
(DW175526) a2n22up.r1 Fiddler crab 4 day blastema cDNA libra...    50   0.078  1
(DW175525) a2n22up.f1 Fiddler crab 4 day blastema cDNA libra...    50   0.078  1
(FE827042) CCAG40699.b1 CCAG Petrolisthes cinctipes heart, g...    50   0.078  1
(EY367035) CAXA11044.fwd CAXA Helobdella robusta Subtracted ...    50   0.078  1
(EX116833) BR071532 pistil cDNA library KCOW Brassica rapa s...    50   0.078  1
(EX087885) BR074175 flower cDNA library KFFB Brassica rapa s...    50   0.078  1
(ES997016) BNAEN3GH_UP_060_C12_01SEP2006_092 Brassica napus ...    50   0.078  1
(ES920875) 24RDBNH_UP_160_D11_14DEC2006_089 Brassica napus 2...    50   0.078  1
(AC131999) Mus musculus chromosome 15, clone RP24-139E21, co...    48   0.31   1
(AC121542) Mus musculus chromosome 15, clone RP24-137J5, com...    48   0.31   1
(AC193880) Pan troglodytes BAC clone CH251-392J1 from chromo...    48   0.31   1
(AY348575) Schistosoma mansoni hox protein Dfd mRNA, complet...    48   0.31   1
(AC131504) Lytechinus variegatus clone Lv92H22, *** SEQUENCI...    48   0.31   1
(AC119545) Rattus norvegicus clone CH230-355E19, *** SEQUENC...    48   0.31   1
(AC097994) Rattus norvegicus clone CH230-54C15, *** SEQUENCI...    48   0.31   1
(CU407078) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.31   1
(AC217487) Canis lupus familiaris clone XX-161J14, *** SEQUE...    48   0.31   1
(AC201384) Strongylocentrotus purpuratus clone R3-17G24, WOR...    48   0.31   1
(AC196810) Macaca mulatta clone CH250-397N20, WORKING DRAFT ...    48   0.31   1
(AC181113) Strongylocentrotus purpuratus clone R3-3043H08, W...    48   0.31   1
(AC179364) Strongylocentrotus purpuratus clone R3-1102B4, WO...    48   0.31   1
(AC179357) Strongylocentrotus purpuratus clone R3-59F5, WORK...    48   0.31   1
(AC172118) Macaca mulatta clone CH250-469F11, WORKING DRAFT ...    48   0.31   1
(AC168584) Strongylocentrotus purpuratus clone R3-3065G1, WO...    48   0.31   1
(AC165836) Bos taurus clone CH240-137K8, *** SEQUENCING IN P...    48   0.31   1
(EH668550) TEF01680 T. thynnus adult liver cDNA expression l...    48   0.31   1
(CR534731) Anopheles gambiae EST, clone AGAEJ13TR.                 48   0.31   1
(CB283769) DF0363 Dermatophagoides farinae cDNA library Derm...    48   0.31   1
(BY808986) Thellungiella halophila cDNA clone: RTFL01-13-L16...    48   0.31   1
(BQ869088) QGD5C08.yg.ab1 QG_ABCDI lettuce salinas Lactuca s...    48   0.31   1
(BJ438871) Dictyostelium discoideum cDNA clone:ddv38a22, 3' ...    48   0.31   1
(BJ399513) Dictyostelium discoideum cDNA clone:dds6f10, 3' e...    48   0.31   1
(FK715157) pl_test1-E7 Ilyanassa (snail) 0-48h Ilyanassa obs...    48   0.31   1
(EY618578) CAWW14785.rev CAWW Capitella sp. I ECS-2004 Subtr...    48   0.31   1
(EY498938) CBBP4410.fwd CBBP Hirudo medicinalis hermaphrodit...    48   0.31   1
(EY498937) CBBP4410.rev CBBP Hirudo medicinalis hermaphrodit...    48   0.31   1
(EY380689) CAXA3019.fwd CAXA Helobdella robusta Subtracted L...    48   0.31   1
(EY322590) CAWX8530.rev CAWX Helobdella robusta Primary Earl...    48   0.31   1
(EY314234) CAWX25393.fwd CAWX Helobdella robusta Primary Ear...    48   0.31   1
(U95738) Human chromosome 16p13.11 BAC clone CIT987SK-29B12 ...    32   0.67   2
(AC009108) Homo sapiens chromosome 16 clone RP11-463O9, comp...    32   0.67   2
(AL021921) Human DNA sequence from clone RP3-357I16 on chrom...    32   0.67   2
(EY385952) CAXA5965.rev CAXA Helobdella robusta Subtracted L...    36   0.87   2
(GD192454) G1045P367RA21.T1 Aplysia californica Pooled Norma...    36   0.87   2
(DE383593) Bombyx mori genomic DNA, BAC clone:5J10A.               32   0.87   2
(DE379451) Bombyx mori genomic DNA, BAC clone:1I4E.                32   0.88   2
(GD192200) G1045P349RG17.T1 Aplysia californica Pooled Norma...    36   0.88   2
(DE599224) Bombyx mori genomic DNA, Fosmid clone:GBMFno258_a...    32   0.90   2
(FJ389740) Ficedula hypoleuca microsatellite FhyB4-7 sequence.     46   1.2    1
(CR394554) Zebrafish DNA sequence from clone CH211-113B13 in...    46   1.2    1
(BX255881) Zebrafish DNA sequence from clone CH211-268E23 in...    46   1.2    1
(BC162608) Danio rerio purinergic receptor P2X, ligand-gated...    46   1.2    1
(BC162598) Danio rerio purinergic receptor P2X, ligand-gated...    46   1.2    1
(AL773598) Zebrafish DNA sequence from clone CH211-207G4.          46   1.2    1
(AF500300) Danio rerio ATP-gated ionotropic receptor subunit...    46   1.2    1
(DQ837165) Ecotropis obliqua NPV strain A1, complete genome.       46   1.2    1
(G41775) U11 Tribolium castaneum Tribolium castaneum STS gen...    46   1.2    1
(BV729543) MPGD27 Foxtail millet genomic SSR sequence Setari...    46   1.2    1
(BV648206) S215P60756RD5.T0 Clara Pan troglodytes troglodyte...    46   1.2    1
(AB146887) Homo sapiens DNA, STS on chromosome 13, D13S0444i...    46   1.2    1
(AC162936) Mus musculus BAC clone RP23-108K5 from chromosome...    46   1.2    1
(AC162879) Mus musculus chromosome 1, clone RP24-169N15, com...    46   1.2    1
(AC161364) Mus musculus BAC clone RP24-353J16 from chromosom...    46   1.2    1
(AC161252) Mus musculus BAC clone RP24-167E3 from chromosome...    46   1.2    1
(AC159187) Mus musculus BAC clone RP24-226L7 from chromosome...    46   1.2    1
(AC127417) Mus musculus BAC clone RP23-459M2 from chromosome...    46   1.2    1
(AC125151) Mus musculus BAC clone RP24-355K8 from chromosome...    46   1.2    1
(AC121603) Mus musculus BAC clone RP23-310D9 from 18, comple...    46   1.2    1
(AC104098) Mus musculus BAC clone RP24-372H3 from 5, complet...    46   1.2    1
(AC101937) Mus musculus chromosome 1, clone RP24-87K13, comp...    46   1.2    1
(AC095281) Rattus norvegicus 4 BAC CH230-10M16 (Children's H...    46   1.2    1
(AC190140) Pan troglodytes BAC clone CH251-439F7 from chromo...    46   1.2    1
(AC146273) Pan troglodytes BAC clone RP43-30B6 from chromoso...    46   1.2    1
(AC146220) Pan troglodytes BAC clone RP43-27B14 from chromos...    46   1.2    1
(EF676051) Guaiacum coulteri clone Gcoult_15 microsatellite ...    46   1.2    1
(AY557793) Saccharomyces cerevisiae clone FLH002126.01X YDR2...    46   1.2    1
(AY485644) Triticum monococcum phosphatidylserine decarboxyl...    46   1.2    1
(AC149491) Medicago truncatula chromosome 2 clone mth2-46o19...    46   1.2    1
(DJ467350) Method for analysing genome using microsatellite ...    46   1.2    1
(CQ332123) Sequence 6217 from Patent WO0157275.                    46   1.2    1
(CQ295532) Sequence 6637 from Patent WO0186003.                    46   1.2    1
(CQ258190) Sequence 6451 from Patent WO0157277.                    46   1.2    1
(CQ219725) Sequence 6564 from Patent WO0157273.                    46   1.2    1
(CQ174413) Sequence 5809 from Patent WO0157274.                    46   1.2    1
(CQ136420) Sequence 6442 from Patent WO0157276.                    46   1.2    1
(CQ097580) Sequence 6439 from Patent WO0157272.                    46   1.2    1
(CQ069991) Sequence 5791 from Patent WO0157278.                    46   1.2    1
(CU469422) Platypus DNA sequence from clone CLM1-30C3.             46   1.2    1
(AY523359) Drosophila simulans strain CS8 genomic sequence.        46   1.2    1
(AY523358) Drosophila simulans strain CS7 genomic sequence.        46   1.2    1
(AY523357) Drosophila simulans strain CS6 genomic sequence.        46   1.2    1
(AY523356) Drosophila simulans strain CS5 genomic sequence.        46   1.2    1
(AY523355) Drosophila simulans strain CS4 genomic sequence.        46   1.2    1
(AY523353) Drosophila simulans strain CS2 genomic sequence.        46   1.2    1
(AY523352) Drosophila simulans strain CS1 genomic sequence.        46   1.2    1
(AY159039) Dictyostelium discoideum LvsC (lvsC) gene, comple...    46   1.2    1
(AL031024) Drosophila melanogaster cosmid clone 196F3.             46   1.2    1
(AE014298) Drosophila melanogaster chromosome X, complete se...    46   1.2    1
(AE014296) Drosophila melanogaster chromosome 3L, complete s...    46   1.2    1
(AC171135) Helobdella robusta clone CH306-1A6, complete sequ...    46   1.2    1
(AC171105) Drosophila melanogaster clone CH223-40I08, comple...    46   1.2    1
(AC165428) Strongylocentrotus purpuratus BAC clone contig co...    46   1.2    1
(AC025724) Caenorhabditis elegans cosmid Y67D8C, complete se...    46   1.2    1
(AC010571) Drosophila melanogaster 3L BAC RP98-22O3 (Roswell...    46   1.2    1
(FJ770082) Homo sapiens chromosome 7 PCR sequence PCR_NA1855...    46   1.2    1
(AL391383) Human DNA sequence from clone RP11-532O21 on chro...    46   1.2    1
(AL355499) Human DNA sequence from clone RP11-328K6 on chrom...    46   1.2    1
(AC012444) Homo sapiens BAC clone RP11-41C17 from 2, complet...    46   1.2    1
(AC008734) Homo sapiens chromosome 19 clone CTD-2529P6, comp...    46   1.2    1
(AC008266) Homo sapiens PAC clone RP5-1145A24 from 7p11.2-p2...    46   1.2    1
(AC007327) Homo sapiens clone RP11-155G7 from 7p14-15, compl...    46   1.2    1
(AC006960) Homo sapiens clone RP11-182J23 from 7p14-15, comp...    46   1.2    1
(AC004988) Homo sapiens PAC clone RP5-1178G13 from 7, comple...    46   1.2    1
(AC151993) Mus musculus chromosome 10 clone RP23-191I4, WORK...    46   1.2    1
(AC149994) Strongylocentrotus purpuratus clone R3-60I2, WORK...    46   1.2    1
(AC149980) Strongylocentrotus purpuratus clone R3-32A6, WORK...    46   1.2    1
(AC148391) Rhinolophus ferrumequinum clone VMRC7-295P7, WORK...    46   1.2    1
(AC141825) Apis mellifera clone CH224-62B13, *** SEQUENCING ...    46   1.2    1
(AC141576) Rattus norvegicus clone CH230-173C17, WORKING DRA...    46   1.2    1
(AC136938) Homo sapiens chromosome 16 clone RP11-1152A8, WOR...    46   1.2    1
(AC134363) Rattus norvegicus clone CH230-2G11, *** SEQUENCIN...    46   1.2    1
(AC133484) Rattus norvegicus clone CH230-191C3, *** SEQUENCI...    46   1.2    1
(AC132794) Rattus norvegicus clone CH230-12A22, *** SEQUENCI...    46   1.2    1
(AC131501) Lytechinus variegatus clone Lv53J24, *** SEQUENCI...    46   1.2    1
(AC131451) Strongylocentrotus purpuratus clone Sp46A16, *** ...    46   1.2    1
(AC130852) Rattus norvegicus clone CH230-109N20, WORKING DRA...    46   1.2    1
(AC128963) Rattus norvegicus clone CH230-8P1, WORKING DRAFT ...    46   1.2    1
(AC128735) Drosophila melanogaster clone CH223-40I8, *** SEQ...    46   1.2    1
(AC128317) Rattus norvegicus clone CH230-243M20, *** SEQUENC...    46   1.2    1
(AC122592) Rattus norvegicus clone CH230-157N24, *** SEQUENC...    46   1.2    1
(AC120332) Rattus norvegicus clone CH230-213A22, WORKING DRA...    46   1.2    1
(AC120277) Rattus norvegicus clone CH230-171B18, *** SEQUENC...    46   1.2    1
(AC119122) Rattus norvegicus clone CH230-329D1, *** SEQUENCI...    46   1.2    1
(AC118424) Rattus norvegicus clone CH230-264O22, WORKING DRA...    46   1.2    1
(AC118174) Rattus norvegicus clone CH230-180C16, *** SEQUENC...    46   1.2    1
(AC118050) Mus musculus chromosome 5 clone RP24-371D5 map 5,...    46   1.2    1
(AC117955) Rattus norvegicus clone CH230-297H21, *** SEQUENC...    46   1.2    1
(AC113722) Rattus norvegicus clone CH230-63B2, WORKING DRAFT...    46   1.2    1
(AC111500) Rattus norvegicus clone CH230-120C20, *** SEQUENC...    46   1.2    1
(AC109991) Rattus norvegicus clone CH230-19B16, *** SEQUENCI...    46   1.2    1
(AC109783) Mus musculus clone RP23-121F10, WORKING DRAFT SEQ...    46   1.2    1
(AC109760) Rattus norvegicus clone CH230-244G16, *** SEQUENC...    46   1.2    1
(AC106946) Rattus norvegicus clone CH230-21B17, *** SEQUENCI...    46   1.2    1
(AC103515) Rattus norvegicus clone CH230-59O13, WORKING DRAF...    46   1.2    1
(AC103114) Rattus norvegicus clone CH230-188B11, WORKING DRA...    46   1.2    1
(AC099373) Rattus norvegicus clone CH230-135O8, WORKING DRAF...    46   1.2    1
(AC098068) Rattus norvegicus clone CH230-118G23, WORKING DRA...    46   1.2    1
(AC097782) Rattus norvegicus clone CH230-39L14, *** SEQUENCI...    46   1.2    1
(AC096395) Rattus norvegicus clone CH230-63L3, *** SEQUENCIN...    46   1.2    1
(AC095383) Rattus norvegicus clone CH230-6N16, *** SEQUENCIN...    46   1.2    1
(AC095346) Rattus norvegicus clone CH230-69B5, WORKING DRAFT...    46   1.2    1
(CU855986) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.2    1
(CU694902) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   1.2    1
(AC055749) Homo sapiens chromosome 3 clone RP11-440B20, WORK...    46   1.2    1
(AC026821) Homo sapiens chromosome 9 clone RP11-146H11 map 9...    46   1.2    1
(AL512373) Human DNA sequence *** SEQUENCING CANCELLED *** f...    46   1.2    1
(AC217564) Pongo abelii chromosome UNKNOWN clone CH276-172D1...    46   1.2    1
(AC216074) Pongo abelii chromosome UNKNOWN clone CH276-498D2...    46   1.2    1
(AC203834) Zea mays chromosome 3 clone ZMMBBb-301D6; ZMMBBb0...    46   1.2    1
(AC203199) Canis lupus familiaris clone XX-192E1, *** SEQUEN...    46   1.2    1
(AC201567) Strongylocentrotus purpuratus clone R3-4001N23, W...    46   1.2    1
(AC201543) Strongylocentrotus purpuratus clone R3-3102L21, W...    46   1.2    1
(AC201508) Strongylocentrotus purpuratus clone R3-3082B23, W...    46   1.2    1
(AC201301) Strongylocentrotus purpuratus clone R3-16I19, WOR...    46   1.2    1
(AC201216) Strongylocentrotus purpuratus clone R3-15E5, WORK...    46   1.2    1
(AC201064) Strongylocentrotus purpuratus clone R3-12P4, WORK...    46   1.2    1
(AC196876) Solanum lycopersicum chromosome 5 clone C05HBa013...    46   1.2    1
(AC184454) Strongylocentrotus purpuratus clone R3-3082P6, WO...    46   1.2    1
(AC184362) Strongylocentrotus purpuratus clone R3-3121P20, W...    46   1.2    1
(AC184324) Strongylocentrotus purpuratus clone R3-1035K3, WO...    46   1.2    1
(AC181810) Strongylocentrotus purpuratus clone R3-1024L10, W...    46   1.2    1
(AC181791) Strongylocentrotus purpuratus clone R3-1029I18, W...    46   1.2    1
(AC181764) Strongylocentrotus purpuratus clone R3-1036A3, WO...    46   1.2    1
(AC181595) Strongylocentrotus purpuratus clone R3-1109B3, WO...    46   1.2    1
(AC181449) Strongylocentrotus purpuratus clone R3-50P10, WOR...    46   1.2    1
(AC181358) Strongylocentrotus purpuratus clone R3-113L12, WO...    46   1.2    1
(AC181325) Strongylocentrotus purpuratus clone R3-4017P15, W...    46   1.2    1
(AC181162) Strongylocentrotus purpuratus clone R3-16C12, WOR...    46   1.2    1
(AC181120) Strongylocentrotus purpuratus clone R3-16K17, WOR...    46   1.2    1
(AC181063) Strongylocentrotus purpuratus clone R3-3050C05, W...    46   1.2    1
(AC180978) Strongylocentrotus purpuratus clone R3-3058H13, W...    46   1.2    1
(AC180839) Strongylocentrotus purpuratus clone R3-3069O18, W...    46   1.2    1
(AC180806) Strongylocentrotus purpuratus clone R3-3071I04, W...    46   1.2    1
(AC180797) Strongylocentrotus purpuratus clone R3-3073K20, W...    46   1.2    1
(AC180779) Strongylocentrotus purpuratus clone R3-3076A23, W...    46   1.2    1
(AC180724) Strongylocentrotus purpuratus clone R3-3083I13, W...    46   1.2    1
(AC180529) Strongylocentrotus purpuratus clone R3-3098G16, W...    46   1.2    1
(AC180490) Strongylocentrotus purpuratus clone R3-3012H12, W...    46   1.2    1
(AC180375) Strongylocentrotus purpuratus clone R3-3112J11, W...    46   1.2    1
(AC180370) Strongylocentrotus purpuratus clone R3-3116D3, WO...    46   1.2    1
(AC180305) Strongylocentrotus purpuratus clone R3-3119N05, W...    46   1.2    1
(AC180301) Strongylocentrotus purpuratus clone R3-3119M02, W...    46   1.2    1
(AC180286) Strongylocentrotus purpuratus clone R3-3121K19, W...    46   1.2    1
(AC180268) Strongylocentrotus purpuratus clone R3-3123I19, W...    46   1.2    1
(AC180193) Strongylocentrotus purpuratus clone R3-3H3, WORKI...    46   1.2    1
(AC180103) Strongylocentrotus purpuratus clone R3-4008B19, W...    46   1.2    1
(AC180092) Strongylocentrotus purpuratus clone R3-4007M3, WO...    46   1.2    1
(AC179841) Strongylocentrotus purpuratus clone R3-1007P15, W...    46   1.2    1
(AC179671) Strongylocentrotus purpuratus clone R3-1021P15, W...    46   1.2    1
(AC179460) Strongylocentrotus purpuratus clone R3-63G3, WORK...    46   1.2    1
(AC179263) Strongylocentrotus purpuratus clone R3-1106D20, W...    46   1.2    1
(AC179209) Strongylocentrotus purpuratus clone R3-1107E5, WO...    46   1.2    1
(AC178967) Strongylocentrotus purpuratus clone R3-3121P14, W...    46   1.2    1
(AC178793) Strongylocentrotus purpuratus clone R3-21O13, WOR...    46   1.2    1
(AC178785) Strongylocentrotus purpuratus clone R3-29P4, WORK...    46   1.2    1
(AC178730) Strongylocentrotus purpuratus clone R3-13D8, WORK...    46   1.2    1
(AC178725) Strongylocentrotus purpuratus clone R3-3002N5, WO...    46   1.2    1
(AC178678) Strongylocentrotus purpuratus clone R3-12C19, WOR...    46   1.2    1
(AC178665) Strongylocentrotus purpuratus clone R3-3007G22, W...    46   1.2    1
(AC178645) Strongylocentrotus purpuratus clone R3-11G01, WOR...    46   1.2    1
(AC178525) Strongylocentrotus purpuratus clone R3-3032J21, W...    46   1.2    1
(AC178292) Strongylocentrotus purpuratus clone R3-3095E21, W...    46   1.2    1
(AC178283) Strongylocentrotus purpuratus clone R3-3093P08, W...    46   1.2    1
(AC178223) Strongylocentrotus purpuratus clone R3-3085M04, W...    46   1.2    1
(AC178173) Strongylocentrotus purpuratus clone R3-3082A20, W...    46   1.2    1
(AC178170) Strongylocentrotus purpuratus clone R3-3081N8, WO...    46   1.2    1
(AC178080) Strongylocentrotus purpuratus clone R3-1117D23, W...    46   1.2    1
(AC177776) Strongylocentrotus purpuratus clone R3-1002M2, WO...    46   1.2    1
(AC177722) Strongylocentrotus purpuratus clone R3-1011A4, WO...    46   1.2    1
(AC177610) Strongylocentrotus purpuratus clone R3-1023J22, W...    46   1.2    1
(AC177545) Strongylocentrotus purpuratus clone R3-1026N2, WO...    46   1.2    1
(AC177509) Strongylocentrotus purpuratus clone R3-1027I22, W...    46   1.2    1
(AC177437) Strongylocentrotus purpuratus clone R3-5C16, WORK...    46   1.2    1
(AC177426) Strongylocentrotus purpuratus clone R3-54K6, WORK...    46   1.2    1
(AC177241) Strongylocentrotus purpuratus clone R3-42F6, WORK...    46   1.2    1
(AC177225) Strongylocentrotus purpuratus clone R3-40J19, WOR...    46   1.2    1
(AC177041) Strongylocentrotus purpuratus clone R3-38N14, WOR...    46   1.2    1
(AC176980) Strongylocentrotus purpuratus clone R3-1103C23, W...    46   1.2    1
(AC176862) Strongylocentrotus purpuratus clone R3-3120P4, WO...    46   1.2    1
(AC176708) Strongylocentrotus purpuratus clone R3-112A11, WO...    46   1.2    1
(AC176626) Strongylocentrotus purpuratus clone R3-3080C22, W...    46   1.2    1
(AC176575) Strongylocentrotus purpuratus clone R3-3077E08, W...    46   1.2    1
(AC176573) Strongylocentrotus purpuratus clone R3-3077D06, W...    46   1.2    1
(AC176380) Strongylocentrotus purpuratus clone R3-3045A7, WO...    46   1.2    1
(AC176211) Strongylocentrotus purpuratus clone R3-3063K23, W...    46   1.2    1
(AC176189) Strongylocentrotus purpuratus clone R3-3063P10, W...    46   1.2    1
(AC176095) Strongylocentrotus purpuratus clone R3-24D18, WOR...    46   1.2    1
(AC175967) Strongylocentrotus purpuratus clone R3-3035E6, WO...    46   1.2    1
(AC175916) Strongylocentrotus purpuratus clone R3-3043I24, W...    46   1.2    1
(AC174961) Strongylocentrotus purpuratus clone R3-33I20, WOR...    46   1.2    1
(AC173984) Strongylocentrotus purpuratus clone R3-1004L4, WO...    46   1.2    1
(AC168842) Strongylocentrotus purpuratus clone R3-13B19, WOR...    46   1.2    1
(AC168814) Strongylocentrotus purpuratus clone R3-13G18, WOR...    46   1.2    1
(AC168812) Strongylocentrotus purpuratus clone R3-13G22, WOR...    46   1.2    1
(AC168471) Strongylocentrotus purpuratus clone R3-35A16, WOR...    46   1.2    1
(AC168420) Strongylocentrotus purpuratus clone R3-39P5, WORK...    46   1.2    1
(AC168372) Strongylocentrotus purpuratus clone R3-4013L20, W...    46   1.2    1
(AC168363) Strongylocentrotus purpuratus clone R3-4013N13, W...    46   1.2    1
(AC168361) Strongylocentrotus purpuratus clone R3-4013N7, WO...    46   1.2    1
(AC167804) Bos taurus clone CH240-201F3, WORKING DRAFT SEQUE...    46   1.2    1
(AC024275) Homo sapiens clone RP11-14O13, LOW-PASS SEQUENCE ...    46   1.2    1
(AC020038) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    46   1.2    1
(AC017603) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    46   1.2    1
(BH183534) 023_P_05-21 SmBAC1 Schistosoma mansoni genomic cl...    46   1.2    1
(AZ778049) 2M0013H08F Mouse 10kb plasmid UUGC1M library Mus ...    46   1.2    1
(AZ700347) RPCI-23-221K4.TJ RPCI-23 Mus musculus genomic clo...    46   1.2    1
(AZ137636) SP_0176_B1_E02_SP6E Strongylocentrotus purpuratus...    46   1.2    1
(FI461001) CH322-36G02.y CHORI-322 Drosophila melanogaster g...    46   1.2    1
(ET517431) fcg2x.pk076.h7.f C. graminicola genomic sequence ...    46   1.2    1
(AL620484) T7 end of clone 023CH03 of library SmBAC1 from st...    46   1.2    1
(DX988738) CHORI103-8D12.TV CHORI103 Schistosoma mansoni gen...    46   1.2    1
(DU543910) OO__Ba0017L09.f OO__Ba Oryza officinalis genomic ...    46   1.2    1
(AL155587) Anopheles gambiae GSS T7 end of clone 29O08 of No...    46   1.2    1
(AL155506) Anopheles gambiae GSS T7 end of clone 29M04 of No...    46   1.2    1
(AJ562778) Cryptosporidium parvum GSS, PAC clone pica_0011_c...    46   1.2    1
(AJ562675) Cryptosporidium parvum GSS, PAC clone pica_0010_f...    46   1.2    1
(DH588887) Rattus norvegicus DNA, BAC clone: RNB1-110I23, 5'...    46   1.2    1
(DH326974) Oryzias latipes Fosmid clone:GOLWFno689_n11, reve...    46   1.2    1
(CZ393288) ZMMBF0172O19r ZMMBF Zea mays genomic clone ZMMBF0...    46   1.2    1
(CE791275) tigr-gss-dog-17000317613507 Dog Library Canis lup...    46   1.2    1
(AG199019) Pan troglodytes DNA, clone: RP43-080C16.TJ.             46   1.2    1
(AG198974) Pan troglodytes DNA, clone: RP43-080B16.TJ.             46   1.2    1
(AG061633) Pan troglodytes DNA, clone: PTB-049L21.F.               46   1.2    1
(EE552206) BNQA_UP_069_H09_30MAY2005_065 Brassica napus BNQA...    46   1.2    1
(EE453857) BNBS4DCT_UP_006_B10_24MAR2005_078 Brassica napus ...    46   1.2    1
(EE142231) SiJWC04BBO2 Lausanne fire ant library Solenopsis ...    46   1.2    1
(EE138023) SiJWC04BBO Lausanne fire ant library Solenopsis i...    46   1.2    1
(EC974461) WIN1019.C21_B11 Muscat Hamburg post-veraison peri...    46   1.2    1
(EB942229) 9540036 ZF34 Danio rerio cDNA clone 3411166, mRNA...    46   1.2    1
(EB629153) AGENCOURT_54973800 D. mojavensis EST Drosophila m...    46   1.2    1
(EB607186) AGENCOURT_54979246 D. mojavensis EST Drosophila m...    46   1.2    1
(EB061606) StheSEQ8389 Sporotrichum thermophile pBluescript ...    46   1.2    1
(EB060789) StheSEQ7407 Sporotrichum thermophile pBluescript ...    46   1.2    1
(EB060347) StheSEQ6861 Sporotrichum thermophile pBluescript ...    46   1.2    1
(EB059287) StheSEQ561 Sporotrichum thermophile pBluescript (...    46   1.2    1
(EB057027) StheSEQ2801 Sporotrichum thermophile pBluescript ...    46   1.2    1
(EB055644) StheSEQ15325 Sporotrichum thermophile pBluescript...    46   1.2    1
(EB054455) StheSEQ13856 Sporotrichum thermophile pBluescript...    46   1.2    1
(DY892379) CeleSEQ10588 Cunninghamella elegans pBluescript (...    46   1.2    1
(DY892040) CeleSEQ8936 Cunninghamella elegans pBluescript (E...    46   1.2    1
(DY889408) CeleSEQ10939 Cunninghamella elegans pBluescript (...    46   1.2    1
(DY007407) BNDH4DCT_UP_030_H07_17DEC2004_049 Brassica napus ...    46   1.2    1
(DV611322) EST1214318 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV608300) EST1211296 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV608044) EST1211040 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV607307) EST1210303 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV607081) EST1210077 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV605956) EST1208952 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV603835) EST1206831 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV601841) EST1204836 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DV601277) EST1204272 Glossina morsitans morsitans Fat body ...    46   1.2    1
(DT294652) JGI_CAAW5881.fwd CAAW Pimephales promelas testis ...    46   1.2    1
(DR026319) Osmo00128 F. cylindrus osmotic stress library Fra...    46   1.2    1
(DR026212) Osmo00235 F. cylindrus osmotic stress library Fra...    46   1.2    1
(DC936367) Physcomitrella patens subsp. patens cDNA, clone:p...    46   1.2    1
(DC935439) Physcomitrella patens subsp. patens cDNA, clone:p...    46   1.2    1
(DA471775) Homo sapiens cDNA clone D9OST2004491, 5' end, mRN...    46   1.2    1
(CX686743) ydd68g01.y2 Sea urchin EST Lib1 Strongylocentrotu...    46   1.2    1
(CX678178) ydc24f02.y2 Sea urchin EST Lib1 Strongylocentrotu...    46   1.2    1
(CX581677) TTE00035392 Amplicon Express - Conjugative Form T...    46   1.2    1
(CX257088) 1310104 NCCCWA 02RT Oncorhynchus mykiss cDNA clon...    46   1.2    1
(CT686194) Danio rerio EST, clone ZF_mu_234l09 5'.                 46   1.2    1
(CT586704) Danio rerio EST, clone ZF_mu_48l20 5'.                  46   1.2    1
(CR928237) Danio rerio EST sequence, clone 225-D05-2.              46   1.2    1
(CN807747) HDAH06H06.F Leech Haementeria depressa library HD...    46   1.2    1
(CN807696) HDAH01G04.F Leech Haementeria depressa library HD...    46   1.2    1
(CN774707) tae73a07.y1 Hydra EST Darmstadt I Hydra magnipapi...    46   1.2    1
(CK146027) AGENCOURT_16946729 NCI_CGAP_ZEmb2 Danio rerio cDN...    46   1.2    1
(CD193984) MS1-0084T-D208-H05-U.G MS1-0084 Schistosoma manso...    46   1.2    1
(CD083633) MA3-9999U-V261-B10-U.B MA3-0001 Schistosoma manso...    46   1.2    1
(BY978872) Physcomitrella patens subsp. patens cDNA clone: P...    46   1.2    1
(BY958337) Physcomitrella patens subsp. patens cDNA clone: P...    46   1.2    1
(BY955473) Physcomitrella patens subsp. patens cDNA clone: P...    46   1.2    1
(AI496676) sb09h12.y1 Gm-c1004 Glycine max cDNA clone GENOME...    46   1.2    1
(BX566520) Glossina morsitans morsitans (Tseatse fly) EST fr...    46   1.2    1
(BX563562) Glossina morsitans morsitans (Tseatse fly) EST fr...    46   1.2    1
(BX562192) Glossina morsitans morsitans (Tseatse fly) EST fr...    46   1.2    1
(BX559482) Glossina morsitans morsitans (Tseatse fly) EST fr...    46   1.2    1
(BX554863) Glossina morsitans morsitans (Tseatse fly) EST fr...    46   1.2    1
(BQ986447) QGE9I04.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    46   1.2    1
(BQ591758) E012617-024-017-G04-SP6 MPIZ-ADIS-024-storage roo...    46   1.2    1
(BJ182798) Physcomitrella patens subsp. patens cDNA clone:pp...    46   1.2    1
(GO220064) CAGB28122.fwd CAGB Alvinella pompejana Normalized...    46   1.2    1
(GO180030) CAGA6482.rev CAGA Alvinella pompejana Normalized ...    46   1.2    1
(GO135409) CAGA26594.rev CAGA Alvinella pompejana Normalized...    46   1.2    1
(GO126557) CAGA22416.rev CAGA Alvinella pompejana Normalized...    46   1.2    1
(GO123719) CAGA21090.rev CAGA Alvinella pompejana Normalized...    46   1.2    1
(GE840807) EST_omyk_evo_834181 omykevo WBC Oncorhynchus myki...    46   1.2    1
(GD208083) G1045P356FJ20.T1 Aplysia californica Pooled Norma...    46   1.2    1
(GD202484) G1045P356FK20.T1 Aplysia californica Pooled Norma...    46   1.2    1
(GD198577) G1045P389FA17.T1 Aplysia californica Pooled Norma...    46   1.2    1
(FM981984) Glossina morsitans morsitans EST, clone GMsg119d0...    46   1.2    1
(FM981586) Glossina morsitans morsitans EST, clone GMsg169c1...    46   1.2    1
(FM978698) Glossina morsitans morsitans EST, clone GMsg104b0...    46   1.2    1
(FM973126) Glossina morsitans morsitans EST, clone GMsg53f08...    46   1.2    1
(FM972110) Glossina morsitans morsitans EST, clone GMsg73c09...    46   1.2    1
(FM968367) Glossina morsitans morsitans EST, clone GMsg60h05...    46   1.2    1
(FM967183) Glossina morsitans morsitans EST, clone GMsg73c09...    46   1.2    1
(FM966865) Glossina morsitans morsitans EST, clone GMsg78c08...    46   1.2    1
(FM965893) Glossina morsitans morsitans EST, clone GMsg13c09...    46   1.2    1
(FM960391) Glossina morsitans morsitans EST, clone GMsg07b04...    46   1.2    1
(FM125096) Rattus norvegicus EST, 5'-end sequence, clone etn...    46   1.2    1
(FK699438) CCBW642.g1 CCBW Cochliobolus heterostrophus, Chet...    46   1.2    1
(FG909597) UCRVU08_CCNS6763_g1 Cowpea IT97K-461-4 Mixed Tiss...    46   1.2    1
(FG906061) UCRVU08_CCNS4353_g1 Cowpea IT97K-461-4 Mixed Tiss...    46   1.2    1
(FG906060) UCRVU08_CCNS4353_b1 Cowpea IT97K-461-4 Mixed Tiss...    46   1.2    1
(FG903018) UCRVU08_CCNS2628_g1 Cowpea IT97K-461-4 Mixed Tiss...    46   1.2    1
(FG903017) UCRVU08_CCNS2628_b1 Cowpea IT97K-461-4 Mixed Tiss...    46   1.2    1
(FG899918) UCRVU08_CCNS16156_g1 Cowpea IT97K-461-4 Mixed Tis...    46   1.2    1
(FG893985) UCRVU08_CCNS13087_g1 Cowpea IT97K-461-4 Mixed Tis...    46   1.2    1
(FG893984) UCRVU08_CCNS13087_b1 Cowpea IT97K-461-4 Mixed Tis...    46   1.2    1
(FG889667) UCRVU08_CCNS10846_g1 Cowpea IT97K-461-4 Mixed Tis...    46   1.2    1
(FG889666) UCRVU08_CCNS10846_b1 Cowpea IT97K-461-4 Mixed Tis...    46   1.2    1
(FG809933) UCRVU04_CCNI11327_g1 Cowpea 524B Mixed Tissue and...    46   1.2    1
(FG809932) UCRVU04_CCNI11327_b1 Cowpea 524B Mixed Tissue and...    46   1.2    1
(FG123756) 5108-112-B04 Oenothera strain hookeri de Vries le...    46   1.2    1
(FF401933) MOOEX68TF MOO Vigna unguiculata cDNA 5', mRNA seq...    46   1.2    1
(FF284893) pgsP0010N18 Solea senegalensis Mix of cDNA librar...    46   1.2    1
(FE046363) LV_ES_RA06K08f Litopenaeus vannamei eyestalk cDNA...    46   1.2    1
(FD805324) CBGZ12049.rev CBGZ Volvox carteri f. nagariensis ...    46   1.2    1
(FC459573) UCRVU08_CCNS645_b1 Cowpea IT97K-461-4 Mixed Tissu...    46   1.2    1
(EY492936) CBBP19197.fwd CBBP Hirudo medicinalis hermaphrodi...    46   1.2    1
(EY492935) CBBP19197.rev CBBP Hirudo medicinalis hermaphrodi...    46   1.2    1
(EY484758) CBBP13781.rev CBBP Hirudo medicinalis hermaphrodi...    46   1.2    1
(EY482704) CBBP12533.rev CBBP Hirudo medicinalis hermaphrodi...    46   1.2    1
(EY439298) CBAY3213.rev CBAY Tubifex tubifex Embryos and juv...    46   1.2    1
(EY356054) CAWZ4149.fwd CAWZ Helobdella robusta Primary Late...    46   1.2    1
(EY352670) CAWZ18949.rev CAWZ Helobdella robusta Primary Lat...    46   1.2    1
(EY339258) CAWY9556.fwd CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY339257) CAWY9556.rev CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY338974) CAWY9380.fwd CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY338973) CAWY9380.rev CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY336838) CAWY7944.fwd CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY336837) CAWY7944.rev CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY330230) CAWY3318.fwd CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY329799) CAWY2990.fwd CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY329798) CAWY2990.rev CAWY Helobdella robusta Subtracted E...    46   1.2    1
(EY325900) CAWY11238.fwd CAWY Helobdella robusta Subtracted ...    46   1.2    1
(EY321286) CAWX7818.rev CAWX Helobdella robusta Primary Earl...    46   1.2    1
(EY318894) CAWX6612.fwd CAWX Helobdella robusta Primary Earl...    46   1.2    1
(EY305429) CAWX19367.fwd CAWX Helobdella robusta Primary Ear...    46   1.2    1
(EX943577) lk20b10.g7 Gnetum female cone (NYBG) Gnetum gnemo...    46   1.2    1
(EV167157) 0143967 Brassica napus Etiolated seedlings (Uni-Z...    46   1.2    1
(EV160185) 0084047 Brassica napus Bud library Brassica napus...    46   1.2    1
(EV157561) 0081423 Brassica napus Bud library Brassica napus...    46   1.2    1
(ES997644) BNAEN3GH_UP_070_B06_02SEP2006_046 Brassica napus ...    46   1.2    1
(AC204850) Zea mays chromosome 3 clone CH201-454N4; ZMMBBc04...    44   1.5    2
(EY374981) CAXA15383.fwd CAXA Helobdella robusta Subtracted ...    34   1.9    2
(EY387467) CAXA6776.fwd CAXA Helobdella robusta Subtracted L...    34   2.0    2
(AC176335) Strongylocentrotus purpuratus clone R3-3053M1, WO...    32   2.4    2
(AC181858) Strongylocentrotus purpuratus clone R3-1020K23, W...    32   2.5    2
(AC201587) Strongylocentrotus purpuratus clone R3-4017C15, W...    34   2.5    2
(AC180392) Strongylocentrotus purpuratus clone R3-3106E8, WO...    34   2.5    2
(EY325009) CAWY10657.fwd CAWY Helobdella robusta Subtracted ...    34   3.2    2
(EY340596) CAWZ10358.fwd CAWZ Helobdella robusta Primary Lat...    34   3.2    2
(EY325008) CAWY10657.rev CAWY Helobdella robusta Subtracted ...    34   3.2    2
(CU639430) Zebrafish DNA sequence from clone CH1073-215E5 in...    44   4.8    1
(BX571723) Zebrafish DNA sequence from clone DKEYP-51D5 in l...    44   4.8    1
(BX548071) Zebrafish DNA sequence from clone DKEY-25L23 in l...    44   4.8    1
(BX510305) Zebrafish DNA sequence from clone CH211-107P11 in...    44   4.8    1

>(AU061118) Dictyostelium discoideum slug cDNA, clone SLD269.
          Length = 266

 Score =  107 bits (54), Expect = 4e-19
 Identities = 54/54 (100%)
 Strand = Plus / Plus


Query: 1  ggtgatgaaaccgattcaacaatatgaccatcgtcatcatcatcattatcatct 54
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  ggtgatgaaaccgattcaacaatatgaccatcgtcatcatcatcattatcatct 54

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 59,811,772
Number of extensions: 5844656
Number of successful extensions: 1733072
Number of sequences better than 10.0: 1288
Length of query: 483
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 460
Effective length of database: 99,442,330,388
Effective search space: 45743471978480
Effective search space used: 45743471978480
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.29
Homology vs Protein 
Query= Contig-U03947-1 (Contig-U03947-1Q) /CSM_Contig/Contig-U03947-1Q.Seq.d
         (483 letters)

Database: nrp_A
           3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 161,568,836
Number of extensions: 1088672
Number of successful extensions: 2169
Number of sequences better than 10.0: 0
Number of HSP's gapped: 2169
Number of HSP's successfully gapped: 0
Length of query: 161
Length of database: 1,061,185,681
Length adjustment: 118
Effective length of query: 43
Effective length of database: 675,508,817
Effective search space: 29046879131
Effective search space used: 29046879131
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.30  gvh: 0.23  alm: 0.84  top: 0.53  tms: 0.00  mit: 0.37  mip: 0.03
 nuc: 0.43  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 68.0 %: nuclear
	 20.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: plasma membrane

>> prediction for Contig-U03947-1 is nuc
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0