>AHB206 (AHB206Q) /CSM/AH/AHB2-A/AHB206Q.Seq.d/
XXXXXXXXXXANGGTGGTGAANTAANTGCCTCCCCAANTTTTTTANAACCNATTTNNTTA
GTANAAATTNCTGCCCCANAAAACGNTANTGGNGGNATTTANTNTGNANTCAATTGTTGT
AAAGGTATTGTTATTGGTNAAAAANGTTGNATNGGTTNCCCNTTATTTTTTGTCAAAGNT
NATTTNCCAGTATTANAATCC

---GGEXXASPXFLXPIXLVXIXAPXNXXGGIXXXXNCCKGIVIGXKXXXGXPLFFVKXX
XPVLXS

Frame A:
---xw*xxclpxffxtxxxsxnxcpxkrxwxxlxxxqll*rycywxkxlxxxpxifcqxx
fxsixi


Frame B:
---GGEXXASPXFLXPIXLVXIXAPXNXXGGIXXXXNCCKGIVIGXKXXXGXPLFFVKXX
XPVLXS


Frame C:
---vvx*xppqxfxnxfx*xkxlpxktxxxxfxxxsivvkvlllvkxvxxvxxyflskxi
xqyxn

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AHB206 (AHB206Q) /CSM/AH/AHB2-A/AHB206Q.Seq.d/                        172   1e-42
VHP735 (VHP735Q) /CSM/VH/VHP7-B/VHP735Q.Seq.d/                        161   5e-39
AHM371 (AHM371Q) /CSM/AH/AHM3-C/AHM371Q.Seq.d/                        161   5e-39
VHN631 (VHN631Q) /CSM/VH/VHN6-B/VHN631Q.Seq.d/                        157   7e-38
VHI116 (VHI116Q) /CSM/VH/VHI1-A/VHI116Q.Seq.d/                        157   7e-38
VHQ257 (VHQ257Q) /CSM/VH/VHQ2-C/VHQ257Q.Seq.d/                        155   3e-37
VHJ893 (VHJ893Q) /CSM/VH/VHJ8-D/VHJ893Q.Seq.d/                        155   3e-37
VHA548 (VHA548Q) /CSM/VH/VHA5-B/VHA548Q.Seq.d/                        155   3e-37
VHA406 (VHA406Q) /CSM/VH/VHA4-A/VHA406Q.Seq.d/                        155   3e-37
SHK460 (SHK460Q) /CSM/SH/SHK4-C/SHK460Q.Seq.d/                        155   3e-37

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

M26017|M26017.1 D.discoideum elongation factor 2 mRNA, complete cds.   103   2e-21  2
BH150585|BH150585.1 ENTPT01TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    40   10     1
BH132473|BH132473.1 ENTON74TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    40   10     1
AZ549739|AZ549739.1 ENTFT23TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    40   10     1
BH137346|BH137346.1 ENTOB90TF Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    40   10     1
AZ675565|AZ675565.1 ENTKR79TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    40   10     1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ295228_1(DQ295228|pid:none) Malawimonas jakobiformis translati...    44   0.001
EU812174_1(EU812174|pid:none) Cyanophora paradoxa clone cpeef2-1...    43   0.004
AF475129_1(AF475129|pid:none) Triticum aestivum elongation facto...    42   0.006
AP005845_16(AP005845|pid:none) Oryza sativa Japonica Group genom...    42   0.006
AY653543_1(AY653543|pid:none) Lodderomyces elongisporus translat...    42   0.008
AB288080_1(AB288080|pid:none) Raphidiophrys contractilis EF2 mRN...    42   0.008
AY497631_1(AY497631|pid:none) Candida parapsilosis strain ATCC 9...    42   0.008
(O23755) RecName: Full=Elongation factor 2;          Short=EF-2;...    42   0.008
EU812183_1(EU812183|pid:none) Mesostigma viride clone mveef2-13 ...    42   0.008
(Q874B9) RecName: Full=Elongation factor 2;          Short=EF-2;...    42   0.008

 psg: 0.75  gvh: 0.55  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: cytoplasmic
	 20.0 %: nuclear
	  8.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: Golgi

>> prediction for AHB206 is cyt

>AHB206Z.Seq
NNNNNNNNNNANGGTGGTGAANTAANTGCCTCCCCAANTTTTTTANAACCNATTTNNTTA
GTANAAATTNCTGCCCCANAAAACGNTANTGGNGGNATTTANTNTGNANTCAATTGTTGT
AAAGGTATTGTTATTGGTNAAAAANGTTGNATNGGTTNCCCNTTATTTTTTGTCAAAGNT
NATTTNCCAGTATTANAATCC