>AHB111 (AHB111Q) /CSM/AH/AHB1-A/AHB111Q.Seq.d/
XXXXXXXXXXTTCATCAAAACCAACCNCAGAATGTGATAAAGGTGATGTTTGTATGGTTT
ATTCTTGTGATACTGAAAAAGGTTGTGTTGAAACTCCACGTGTTTGTCCATCCAAAGGTA
AATGTCAAGTTGGTAAATGTGTTCCAGGTGTTGGTTGTAAATATGAACCACGTGTTTGTA
AAGCTGATGCTTTCTGTTTAGTTGCTGAATGTGATGAAATAGTTGGTTGTATTCAATTTG
AAAAGAAATGTGCTGCTGATAATGGTAGATGTCAAGCTGGTATTTGTAAGAATGCAACTG
CAACTGAAGAAGGTACTTGTGAGTCTGTTGATTTCGATCCAAAACCATTCATTTGTAAAA
CTGCTGCTGTTGTTTCAGTTGGTGTTGCTGTTGGTGTTGCTGTTGGTGGTGCAATTGCAC
TTGGTGTNNNTANTTTTGCTGGTAAGAAAGGTTA

---SSKPTXECDKGDVCMVYSCDTEKGCVETPRVCPSKGKCQVGKCVPGVGCKYEPRVCK
ADAFCLVAECDEIVGCIQFEKKCAADNGRCQAGICKNATATEEGTCESVDFDPKPFICKT
AAVVSVGVAVGVAVGGAIALGVXXFAGKKG

Frame A:
---SSKPTXECDKGDVCMVYSCDTEKGCVETPRVCPSKGKCQVGKCVPGVGCKYEPRVCK
ADAFCLVAECDEIVGCIQFEKKCAADNGRCQAGICKNATATEEGTCESVDFDPKPFICKT
AAVVSVGVAVGVAVGGAIALGVXXFAGKKG


Frame B:
---hqnqpqnvikvmfvwfilvilkkvvlklhvfvhpkvnvklvnvfqvlvvnmnhvfvk
lmlsv*llnvmk*lvvfnlkrnvllimvdvklvfvrmqlqlkkvlvsllisiqnhsfvkl
lllfqlvlllvlllvvqlhlvxxxllvrkv


Frame C:
---iktnxrm**r*clyglfl*y*krlc*nstclsiqr*mssw*mcsrcwl*i*ttcl*s
*cflfsc*m**nswlysi*kemcc**w*msswyl*ecncn*rryl*vc*frsktihl*nc
cccfswcccwcccwwcnctwcxxfcw*erl

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SSK891 (SSK891Q) /CSM/SS/SSK8-D/SSK891Q.Seq.d/                        850   0.0
SLE370 (SLE370Q) /CSM/SL/SLE3-C/SLE370Q.Seq.d/                        850   0.0
CHP226 (CHP226Q) /CSM/CH/CHP2-B/CHP226Q.Seq.d/                        850   0.0
CHM354 (CHM354Q) /CSM/CH/CHM3-C/CHM354Q.Seq.d/                        850   0.0
AHO487 (AHO487Q) /CSM/AH/AHO4-D/AHO487Q.Seq.d/                        850   0.0
AHN461 (AHN461Q) /CSM/AH/AHN4-C/AHN461Q.Seq.d/                        850   0.0
AHM282 (AHM282Q) /CSM/AH/AHM2-D/AHM282Q.Seq.d/                        850   0.0
AHL357 (AHL357Q) /CSM/AH/AHL3-C/AHL357Q.Seq.d/                        850   0.0
AHL176 (AHL176Q) /CSM/AH/AHL1-D/AHL176Q.Seq.d/                        850   0.0
AHK601 (AHK601Q) /CSM/AH/AHK6-A/AHK601Q.Seq.d/                        850   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

G65023|G65023.1 DH0304 Dictyostelium discoideum ( P.Dear ) Dictyostelium discoideum STS genomic 5', sequence tagged site.   591   e-165  1
U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, complete cds.    52   1e-10  4
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 map 581427-735498 strain AX4, complete sequence.    54   3e-06  6
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4, complete sequence.    52   5e-06  9
AC007814|AC007814.6 Drosophila melanogaster, chromosome 3R, region 91D-91E, BAC clone BACR44N12, complete sequence.    62   7e-06  1
AC007891|AC007891.8 Drosophila melanogaster, chromosome 3R, region 91E-91E, BAC clone BACR07D13, complete sequence.    62   7e-06  1
AC017841|AC017841.1 Drosophila melanogaster, WORKING DRAFT SEQUENCE, in ordered pieces.    62   7e-06  1
AE003724|AE003724.3 Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete sequence.    62   7e-06  4
AF414117|AF414117.1 Drosophila melanogaster stardust protein MAGUK1 isoform (sdt) mRNA, complete cds, alternatively spliced.    60   3e-05  1
AF414118|AF414118.1 Drosophila melanogaster stardust protein GUK1 isoform (sdt) mRNA, complete cds, alternatively spliced.    60   3e-05  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   159   3e-38
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor;                152   4e-36
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   136   2e-31
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   129   3e-29
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                126   2e-28
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                 95   8e-19
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                 82   7e-15
S44208(S44208) extracellular matrix protein B - Dictyostelium mi...    64   2e-09
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell...    60   2e-08
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste...    60   2e-08

 psg: 0.78  gvh: 0.35  alm: 0.25  top: 0.73  tms: 0.07  mit: 0.26  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 1.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 20.0 %: nuclear
	 16.0 %: vesicles of secretory system
	 12.0 %: mitochondrial
	  8.0 %: Golgi
	  8.0 %: endoplasmic reticulum
	  4.0 %: extracellular, including cell wall
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane

>> prediction for AHB111 is cyt

>AHB111Z.Seq
NNNNNNNNNNTTCATCAAAACCAACCNCAGAATGTGATAAAGGTGATGTTTGTATGGTTT
ATTCTTGTGATACTGAAAAAGGTTGTGTTGAAACTCCACGTGTTTGTCCATCCAAAGGTA
AATGTCAAGTTGGTAAATGTGTTCCAGGTGTTGGTTGTAAATATGAACCACGTGTTTGTA
AAGCTGATGCTTTCTGTTTAGTTGCTGAATGTGATGAAATAGTTGGTTGTATTCAATTTG
AAAAGAAATGTGCTGCTGATAATGGTAGATGTCAAGCTGGTATTTGTAAGAATGCAACTG
CAACTGAAGAAGGTACTTGTGAGTCTGTTGATTTCGATCCAAAACCATTCATTTGTAAAA
CTGCTGCTGTTGTTTCAGTTGGTGTTGCTGTTGGTGTTGCTGTTGGTGGTGCAATTGCAC
TTGGTGTNNNTANTTTTGCTGGTAAGAAAGGTTA