>AHB107 (AHB107Q) /CSM/AH/AHB1-A/AHB107Q.Seq.d/
AATAATAATAACAATAATAATAATAATTCAAGCGTATCAGAAAAAAAAAAGAGTAAAAAA
AAAGTTAGAATTCAAGAAGAAGAAAGATTANCAGAATCNTATGATGATGATGGNGATGAT
GAANAGAGAAGAGCNTACATTGANAATGAAGAGGGAGAGGAGGAGGAGACTGAGGATGGT
NTANTATTACAACCAATTGTTAGAGATCATTCAACATATAGACCAAAGAATTTGTATGGG
TCAAGTGACNATNTTAGGGAGGGTGATTCATTTGGAGCTAAAGTGAGTAAAACTTTTGGA
AAGACAAATAAAAAGATTXXXXXXXXXXTTACCATTGATGTTGACAGTTATGACTGCCAA
ATGGGTTGCCGATGCTCTCATTCATCCATTGTTTGATCTTTTGATGCAAATGAAATACAT
TCCATACCTCGAACCAAATCCATCCAAAGAGATGAAATTGATGATGTGTAAACATATCAT
GGCAAAGAAACCAGTCTATTTGGCAGAGAAAGACACCTTGGGCAATATCCTTCGTGTCTT
GAAAGAAACTCGTCACAATGGTTTCCCAGTGGTCAACAATGACGAGGAGAAGTTGGTCAA
AGGTCTCATTTTACGTACTCAATTATTAATGATTTTAGAACGTATCTCTGATGTTTACAT
TCCAAACTCTGAAGCAATCTATTCTCACATTGAATATACCACCAAATTAACCTGGAAATT
ACCATCGGTCAATGATTTCAATTTCGATCCAGCTGATTACTCTCAAGAGATTGATCTTAC
CGATGTTATGAATTTAACTGTAATCACCGTTAACGTTGAATTTGCAGTTAGTGAAGCTTT
TCAATTATTCAGAACAATGGGTTTACGTCATATGCCTGTTGTAAATGAAAATAACAAACT
CAAAGGTATTATCACTAAAAAGGATCTTTTAGAAAAAACTTGGAACAAAGATATCGGAAT
TAAATCATA

NNNNNNNNNSSVSEKKKSKKKVRIQEEERLXESYDDDGDDEXRRAYIXNEEGEEEETEDG
XXLQPIVRDHSTYRPKNLYGSSDXXREGDSFGAKVSKTFGKTNKKI---

---LPLMLTVMTAKWVADALIHPLFDLLMQMKYIPYLEPNPSKEMKLMMCKHIMAKKPVY
LAEKDTLGNILRVLKETRHNGFPVVNNDEEKLVKGLILRTQLLMILERISDVYIPNSEAI
YSHIEYTTKLTWKLPSVNDFNFDPADYSQEIDLTDVMNLTVITVNVEFAVSEAFQLFRTM
GLRHMPVVNENNKLKGIITKKDLLEKTWNKDIGIKS

Frame A:
NNNNNNNNNSSVSEKKKSKKKVRIQEEERLXESYDDDGDDEXRRAYIXNEEGEEEETEDG
XXLQPIVRDHSTYRPKNLYGSSDXXREGDSFGAKVSKTFGKTNKKI---

---LPLMLTVMTAKWVADALIHPLFDLLMQMKYIPYLEPNPSKEMKLMMCKHIMAKKPVY
LAEKDTLGNILRVLKETRHNGFPVVNNDEEKLVKGLILRTQLLMILERISDVYIPNSEAI
YSHIEYTTKLTWKLPSVNDFNFDPADYSQEIDLTDVMNLTVITVNVEFAVSEAFQLFRTM
GLRHMPVVNENNKLKGIITKKDLLEKTWNKDIGIKS

Frame B:
iiitiiiiiqayqkkkrvkkklefkkkkdxqnxmmmmxmmxreextlxmkrerrrrlrmv
xyynqlleiiqhidqricmgqvtxlgrvihlelk*vkllerqikr---

---yh*c*ql*lpnglpmlsfihclif*ck*ntfhtsnqihpkr*n**cvniswqrnqsi
wqrktpwaisfvs*kklvtmvsqwstmtrrswskvsfyvlny**f*nvslmftfqtlkqs
iltlnippn*pgnyhrsmisisiqlitlkrlilpml*i*l*spltlnlqlvklfnyseqw
vyvicll*mkitnskvlslkrif*kklgtkiselnh

Frame C:
***q****fkrirkkke*kks*nsrrrkixrix***wx**xeksxh*x*rgrgggd*gwx
xittnc*rsfni*tkefvwvk*xx*gg*fiws*se*nfwkdk*kd---

---tidvdsydcqmgcrcshssiv*sfdaneihsiprtksiqrdeiddv*tyhgketslf
grerhlgqypsclernssqwfpsgqq*rgevgqrshftysiindfrtyl*clhskl*snl
fsh*iyhqinleitigq*fqfrss*llsrd*syrcyefncnhr*r*ics**sfsiiqnng
ftsyacck*k*qtqryyh*kgsfrknleqryrn*ii

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AHB107 (AHB107Q) /CSM/AH/AHB1-A/AHB107Q.Seq.d/                       1580   0.0
VHN886 (VHN886Q) /CSM/VH/VHN8-D/VHN886Q.Seq.d/                       1271   0.0
VHL141 (VHL141Q) /CSM/VH/VHL1-B/VHL141Q.Seq.d/                       1271   0.0
VHI419 (VHI419Q) /CSM/VH/VHI4-A/VHI419Q.Seq.d/                       1271   0.0
VHB824 (VHB824Q) /CSM/VH/VHB8-A/VHB824Q.Seq.d/                       1271   0.0
SHK875 (SHK875Q) /CSM/SH/SHK8-D/SHK875Q.Seq.d/                       1271   0.0
SHD725 (SHD725Q) /CSM/SH/SHD7-B/SHD725Q.Seq.d/                       1271   0.0
SHA305 (SHA305Q) /CSM/SH/SHA3-A/SHA305Q.Seq.d/                       1271   0.0
AHQ471 (AHQ471Q) /CSM/AH/AHQ4-C/AHQ471Q.Seq.d/                       1271   0.0
AHO296 (AHO296Q) /CSM/AH/AHO2-D/AHO296Q.Seq.d/                       1271   0.0

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

BX323067|BX323067.11 Zebrafish DNA sequence from clone CH211-277B21 in linkage group 24.    54   1e-11  11
BI504328|BI504328.1 BB170015B10G01.5 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170015B10G01 5', mRNA sequence.    54   2e-11  3
AC122016|AC122016.4 Mus musculus chromosome 16 clone RP24-359J23, complete sequence.    48   2e-11  8
AL987387|AL987387.1 Danio rerio genomic clone DKEY-61N5, genomic survey sequence.    54   4e-10  2
AC115604|AC115604.2 Dictyostelium discoideum chromosome 2 map 4354771-4414991 strain AX4, complete sequence.    54   5e-10  2
BX222021|BX222021.1 Danio rerio genomic clone DKEY-52K13, genomic survey sequence.    54   5e-10  2
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4, complete sequence.    56   5e-10  2
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 map 3108975-3191114 strain AX4, complete sequence.    54   6e-10  2
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 map 4915084-5005461 strain AX4, complete sequence.    54   7e-10  2
AF500794|AF500794.1 Piromyces sp. E2 clone 31 feruloyl esterase FaeA gene, 3' UTR and non-coding intergenic region.    52   8e-10  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q1ZXJ0) RecName: Full=Chloride channel protein D;                    397   e-109
BC073264_1(BC073264|pid:none) Xenopus laevis MGC80627 protein, m...   119   1e-25
AE013599_1591(AE013599|pid:none) Drosophila melanogaster chromos...   117   4e-25
DQ440134_1(DQ440134|pid:none) Aedes aegypti clone AE-9505 chlori...   117   6e-25
BC125873_1(BC125873|pid:none) Danio rerio chloride channel 7, mR...   113   8e-24
BC091969_1(BC091969|pid:none) Danio rerio chloride channel 7, mR...   112   2e-23
AK292136_1(AK292136|pid:none) Homo sapiens cDNA FLJ78478 complet...   111   3e-23
BC006158_1(BC006158|pid:none) Homo sapiens chloride channel 7, m...   111   3e-23
BC004946_1(BC004946|pid:none) Homo sapiens, clone IMAGE:3615790,...   111   3e-23
S68426(S68426;S72561)chloride channel protein CLC-7 - rat             111   3e-23

 psg: 0.60  gvh: -0.03  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.24  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: nuclear
	 28.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: mitochondrial
	  4.0 %: vacuolar

>> prediction for AHB107 is nuc

>AHB107F.Seq
AATAATAATAACAATAATAATAATAATTCAAGCGTATCAGAAAAAAAAAAGAGTAAAAAA
AAAGTTAGAATTCAAGAAGAAGAAAGATTANCAGAATCNTATGATGATGATGGNGATGAT
GAANAGAGAAGAGCNTACATTGANAATGAAGAGGGAGAGGAGGAGGAGACTGAGGATGGT
NTANTATTACAACCAATTGTTAGAGATCATTCAACATATAGACCAAAGAATTTGTATGGG
TCAAGTGACNATNTTAGGGAGGGTGATTCATTTGGAGCTAAAGTGAGTAAAACTTTTGGA
AAGACAAATAAAAAGATTNNNNNNNNNN

>AHB107Z.Seq
NNNNNNNNNNTTACCATTGATGTTGACAGTTATGACTGCCAAATGGGTTGCCGATGCTCT
CATTCATCCATTGTTTGATCTTTTGATGCAAATGAAATACATTCCATACCTCGAACCAAA
TCCATCCAAAGAGATGAAATTGATGATGTGTAAACATATCATGGCAAAGAAACCAGTCTA
TTTGGCAGAGAAAGACACCTTGGGCAATATCCTTCGTGTCTTGAAAGAAACTCGTCACAA
TGGTTTCCCAGTGGTCAACAATGACGAGGAGAAGTTGGTCAAAGGTCTCATTTTACGTAC
TCAATTATTAATGATTTTAGAACGTATCTCTGATGTTTACATTCCAAACTCTGAAGCAAT
CTATTCTCACATTGAATATACCACCAAATTAACCTGGAAATTACCATCGGTCAATGATTT
CAATTTCGATCCAGCTGATTACTCTCAAGAGATTGATCTTACCGATGTTATGAATTTAAC
TGTAATCACCGTTAACGTTGAATTTGCAGTTAGTGAAGCTTTTCAATTATTCAGAACAAT
GGGTTTACGTCATATGCCTGTTGTAAATGAAAATAACAAACTCAAAGGTATTATCACTAA
AAAGGATCTTTTAGAAAAAACTTGGAACAAAGATATCGGAATTAAATCATA

>AHB107P.Seq
AATAATAATAACAATAATAATAATAATTCAAGCGTATCAGAAAAAAAAAAGAGTAAAAAA
AAAGTTAGAATTCAAGAAGAAGAAAGATTANCAGAATCNTATGATGATGATGGNGATGAT
GAANAGAGAAGAGCNTACATTGANAATGAAGAGGGAGAGGAGGAGGAGACTGAGGATGGT
NTANTATTACAACCAATTGTTAGAGATCATTCAACATATAGACCAAAGAATTTGTATGGG
TCAAGTGACNATNTTAGGGAGGGTGATTCATTTGGAGCTAAAGTGAGTAAAACTTTTGGA
AAGACAAATAAAAAGATT----------TTACCATTGATGTTGACAGTTATGACTGCCAA
ATGGGTTGCCGATGCTCTCATTCATCCATTGTTTGATCTTTTGATGCAAATGAAATACAT
TCCATACCTCGAACCAAATCCATCCAAAGAGATGAAATTGATGATGTGTAAACATATCAT
GGCAAAGAAACCAGTCTATTTGGCAGAGAAAGACACCTTGGGCAATATCCTTCGTGTCTT
GAAAGAAACTCGTCACAATGGTTTCCCAGTGGTCAACAATGACGAGGAGAAGTTGGTCAA
AGGTCTCATTTTACGTACTCAATTATTAATGATTTTAGAACGTATCTCTGATGTTTACAT
TCCAAACTCTGAAGCAATCTATTCTCACATTGAATATACCACCAAATTAACCTGGAAATT
ACCATCGGTCAATGATTTCAATTTCGATCCAGCTGATTACTCTCAAGAGATTGATCTTAC
CGATGTTATGAATTTAACTGTAATCACCGTTAACGTTGAATTTGCAGTTAGTGAAGCTTT
TCAATTATTCAGAACAATGGGTTTACGTCATATGCCTGTTGTAAATGAAAATAACAAACT
CAAAGGTATTATCACTAAAAAGGATCTTTTAGAAAAAACTTGGAACAAAGATATCGGAAT
TAAATCATA