VSK314
Library VS
(Link to library)
Clone ID VSK314
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig -
Original site URL
Representative seq. ID VSK314F
(Link to Original site)
Representative DNA sequence
>VSK314 (VSK314Q) /CSM/VS/VSK3-A/VSK314Q.Seq.d/
AACATCTTAGTAACTGTAGGAAAAAAAANTAAAAAAAAAAXXXXXXXXXX
sequence update 2001. 3.22
Translated Amino Acid sequence
NILVTVGKKXKKK---


Translated Amino Acid sequence (All Frames)
Frame A:
NILVTVGKKXKKK---


Frame B:
ts**l*ekkxkk---


Frame C:
hlsncrkkx*kk---


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

VSK340 (VSK340Q) /CSM/VS/VSK3-B/VSK340Q.Seq.d/ 40 0.002
VSK314 (VSK314Q) /CSM/VS/VSK3-A/VSK314Q.Seq.d/ 40 0.002
VSJ811 (VSJ811Q) /CSM/VS/VSJ8-A/VSJ811Q.Seq.d/ 40 0.002
VSG190 (VSG190Q) /CSM/VS/VSG1-D/VSG190Q.Seq.d/ 40 0.002
VSF886 (VSF886Q) /CSM/VS/VSF8-D/VSF886Q.Seq.d/ 40 0.002
VSF859 (VSF859Q) /CSM/VS/VSF8-C/VSF859Q.Seq.d/ 40 0.002
VSF783 (VSF783Q) /CSM/VS/VSF7-D/VSF783Q.Seq.d/ 40 0.002
VSD419 (VSD419Q) /CSM/VS/VSD4-A/VSD419Q.Seq.d/ 40 0.002
VSB752 (VSB752Q) /CSM/VS/VSB7-C/VSB752Q.Seq.d/ 40 0.002
VSB175 (VSB175Q) /CSM/VS/VSB1-D/VSB175Q.Seq.d/ 40 0.002

own update 2001.11.13
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AJ512794|AJ512794.1 Dictyostelium discoideum mRNA for LIS1 protein. 40 1.6 1
AJ512336|AJ512336.1 Dictyostelium discoideum mRNA for LIS1 protein. 40 1.6 1
AB000109|AB000109.1 Dictyostelium discoideum mitochondrial DNA, complete sequence. 40 1.6 1
D16466|D16466.1 Dictyostelium discoideum mitochondrial DNA. 40 1.6 1

dna update 2003. 7.28
Homology vs Protein

***** No hits found ******

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3039690
Number of Hits to DB: 23,517,818
protein update 2009. 3.26
PSORT -
5' end seq. ID VSK314F
5' end seq.
>VSK314F.Seq
AACATCTTAGTAACTGTAGGAAAAAAAANTAAAAAAAAAA----------
Length of 5' end seq. 40
3' end seq. ID -
3' end seq. -
Length of 3' end seq. -
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -