AHA817
Library AH
(Link to library)
Clone ID AHA817
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U11129-1
Original site URL
Representative seq. ID AHA817P
(Link to Original site)
Representative DNA sequence
>AHA817 (AHA817Q) /CSM/AH/AHA8-A/AHA817Q.Seq.d/
ATCATTGTTAATAGCAAAAGAAAAATGGCAACAAAAAATACATCTCCTTATGAGATTGAA
TATGCAAAGAGTGATAGATCAACATGTTCAACCTGTCAAAGAGGTATTAATAAAGAAGCA
GTTCGTATTGGTTATAAAACAAAATCAAAACACTTTGATGGAATGGATGTATCATGGCAT
CATTTAAAATGTAAATGTCCACAAGTACCATCATTTACAGATTTAATTCACTGGGAATAC
CTTCGTTGGGAAGACCAATTATCAATTAAAACAACTTATTTTTCATCTGAAAAGTATGAT
CCAAAATCAGCATCAGAGGTACAAAGAGAGAAATATTTAAAGGCATTATGGGAAGTTAAA
GATAGTATTGCCGATAACTTGAAGGGACCAGNGATTAAAAACATCATTCAATATAATAAA
GGTTATGTTGATAAGGTATCACCAGTTCATTTACTTCATACTCTCTCTGATTGGATGTTA
AAAGGTCGTCCAGGTAGATGTCCAACTTGTAAGAATTTCGATATACTTTTCAATGGTATC
GAATATCAATGTAAAGGTTGGATTTCAGGTTTCACAAAATGTGATTGGAAAGGTGATTCA
ATTGAAAGAXXXXXXXXXXTGAATCACTCGAGGGTAACATGATTGAAAATCAATATATTA
CACTCAAAACCAAACTCACTCCCACTTGATAAAGATAGTGTAGTTTATAAAACCTTGGTA
GATTATGTTGCCAATAGTCAAGATAAACAATTTAGAACCAATATCTGTGTTCAAGATATT
CTTTCACTTGAGAGAGAGAATGAAAGTGAACGTTTCACTCCTTGGGCAAAAGATAAGAAT
AGATTACTCTTATGGCATGGTAGTAGGTTAACTAATTTCGTATCGATTGTCTCGCAGGGA
TTAAGAATTGCTCCACCATCTGCTCCAAAAACTGGTTACAGATTTGGTAAAGGTATTTAT
TTTGCTGATTGTATTAGTAAATCATTCAGCTATTGTTTCACATCAAGTGATTGTCCAACT
GCACTTATGTTATTATGTGAAGTTTCACTTGGTGACATGAATGAATTGAAACATGATACC
TATATGGAAGAGGCACCACATCCATTCCATAGTACAAAAGCTTTAGGTATGGCTGCTCCT
CACAAAGATGGTAATCATCCTCTTTCTGATTCTGATGGTTTAGTAGTACCATTAGGTAAA
ATTTCAAAGACTGGTCTCTCAACTTCATGTACTCACAATGAATTCATTGTCTATAAAATT
GAACAAGTCAGAATCAAATACATCTTAAGAGTTTACAAGGAAAATAAAATAAAATAAAAT
TTTTTAAAATTA
sequence update 2002.10.25
Translated Amino Acid sequence
IIVNSKRKMATKNTSPYEIEYAKSDRSTCSTCQRGINKEAVRIGYKTKSKHFDGMDVSWH
HLKCKCPQVPSFTDLIHWEYLRWEDQLSIKTTYFSSEKYDPKSASEVQREKYLKALWEVK
DSIADNLKGPXIKNIIQYNKGYVDKVSPVHLLHTLSDWMLKGRPGRCPTCKNFDILFNGI
EYQCKGWISGFTKCDWKGDSIER---

---ESLEGNMIENQYITLKTKLTPT**r*csl*nlgrlccq*sr*ti*nqylcsrysft*
ere*k*tfhslgkr*e*itlmaw**vn*fridclagikncsticsknwlqiw*rylfc*l
y**iiqllfhik*lsnctyvim*sftw*he*iet*ylygrgttsip*yksfrygcssqrw
*sssf*f*wfsstir*nfkdwslnfmysq*ihcl*n*tsqnqihlkslqgk*nkikffki


Translated Amino Acid sequence (All Frames)
Frame A:
IIVNSKRKMATKNTSPYEIEYAKSDRSTCSTCQRGINKEAVRIGYKTKSKHFDGMDVSWH
HLKCKCPQVPSFTDLIHWEYLRWEDQLSIKTTYFSSEKYDPKSASEVQREKYLKALWEVK
DSIADNLKGPXIKNIIQYNKGYVDKVSPVHLLHTLSDWMLKGRPGRCPTCKNFDILFNGI
EYQCKGWISGFTKCDWKGDSIER---

---*itrg*hd*ksiyytqnqthshlikiv*fikpw*imlpivkinnlepisvfkiffhl
rermkvnvsllgqkiridysygmvvg*lisyrlsrrd*ellhhllqklvtdlvkvfilli
vlvnhsaivshqvivqlhlcyyvkfhlvt*mn*nmipiwkrhhihsivqkl*vwllltkm
viilflilmv**yh*vkfqrlvsqlhvltmnslsiklnksesnts*eftrkik*nkif*n

Frame B:
slliakekwqqkihllmrlnmqrvidqhvqpvkevlikkqfvlvikqnqntlmewmyhgi
i*nvnvhkyhhlqi*ftgntfvgktnyqlkqlifhlksmiqnqhqrykerni*rhygklk
ivlpit*rdqxlktsfniikvmliryhqfiyfilsligc*kvvqvdvqlvrisiyfsmvs
ninvkvgfqvsqnvigkviqlk---

---ESLEGNMIENQYITLKTKLTPT**r*csl*nlgrlccq*sr*ti*nqylcsrysft*
ere*k*tfhslgkr*e*itlmaw**vn*fridclagikncsticsknwlqiw*rylfc*l
y**iiqllfhik*lsnctyvim*sftw*he*iet*ylygrgttsip*yksfrygcssqrw
*sssf*f*wfsstir*nfkdwslnfmysq*ihcl*n*tsqnqihlkslqgk*nkikffki

Frame C:
hc**qkkngnkkyisl*d*icke**inmfnlskry**rsssywl*nkiktl*wngcimas
fkm*mststiiyrfnslgipslgrpiin*nnlffi*kv*skisirgtkreifkgimgs*r
*ycr*legtxd*khhsi**rlc**gitssftsysl*ldvkrssr*msnl*efrytfqwyr
ism*rldfrfhkm*ler*fn*k---

---nhsrvt*lkinilhskpnslpldkdsvvyktlvdyvansqdkqfrtnicvqdilsle
reneserftpwakdknrlllwhgsrltnfvsivsqglriappsapktgyrfgkgiyfadc
isksfsycftssdcptalmllcevslgdmnelkhdtymeeaphpfhstkalgmaaphkdg
nhplsdsdglvvplgkisktglstscthnefivykieqvrikyilrvykenkik*nflkl

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AHA817 (AHA817Q) /CSM/AH/AHA8-A/AHA817Q.Seq.d/ 2510 0.0
VHB303 (VHB303Q) /CSM/VH/VHB3-A/VHB303Q.Seq.d/ 1348 0.0
AHB712 (AHB712Q) /CSM/AH/AHB7-A/AHB712Q.Seq.d/ 1348 0.0
AHR444 (AHR444Q) /CSM/AH/AHR4-B/AHR444Q.Seq.d/ 1340 0.0
CHQ835 (CHQ835Q) /CSM/CH/CHQ8-B/CHQ835Q.Seq.d/ 1338 0.0
SHD815 (SHD815Q) /CSM/SH/SHD8-A/SHD815Q.Seq.d/ 1336 0.0
CHI483 (CHI483Q) /CSM/CH/CHI4-D/CHI483Q.Seq.d/ 1336 0.0
AHL736 (AHL736Q) /CSM/AH/AHL7-B/AHL736Q.Seq.d/ 1334 0.0
VHB869 (VHB869Q) /CSM/VH/VHB8-C/VHB869Q.Seq.d/ 1332 0.0
AHF461 (AHF461Q) /CSM/AH/AHF4-C/AHF461Q.Seq.d/ 1332 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AJ534948|AJ534948.1 Dictyostelium discoideum mRNA for NAD(+) ADP-ribosyltransferase-1A (adprt-1A gene). 1215 0.0 2
AJ520099|AJ520099.1 Dictyostelium discoideum mRNA for (ADP-ribosyl)transferase (adprt2 gene). 62 2e-14 3
AC142355|AC142355.1 Pan troglodytes BAC clone RP43-22I16 from 7, complete sequence. 32 0.023 11
AE016967|AE016967.1 Mycoplasma gallisepticum strain R section 1 of 4 of the complete genome. 36 0.034 13
AC139644|AC139644.1 Rattus norvegicus clone CH230-401P15, *** SEQUENCING IN PROGRESS ***, 30 unordered pieces. 40 0.058 5
AC106674|AC106674.4 Rattus norvegicus clone CH230-108D18, *** SEQUENCING IN PROGRESS ***, 4 unordered pieces. 38 0.069 11
BX927159|BX927159.5 Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone. 38 0.077 9
AC025807|AC025807.2 Homo sapiens clone RP11-657G2, WORKING DRAFT SEQUENCE, 15 unordered pieces. 50 0.083 1
AC107307|AC107307.3 Homo sapiens 3 BAC RP11-657G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence. 50 0.083 1
AP003189|AP003189.2 Clostridium perfringens str. 13 DNA, complete genome, section 5/10. 36 0.22 14
dna update 2004. 2.25
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

X65497_1(X65497|pid:none) R.norvegicus mRNA for poly(ADP-ribose)... 186 2e-45
(P27008) RecName: Full=Poly [ADP-ribose] polymerase 1; ... 186 2e-45
PDBF(1A26) MOL_ID: 1; MOLECULE: POLY (ADP-RIBOSE) POLYMERASE; CH... 185 3e-45
(P26446) RecName: Full=Poly [ADP-ribose] polymerase 1; ... 185 3e-45
AK303340_1(AK303340|pid:none) Homo sapiens cDNA FLJ53442 complet... 184 6e-45
(Q9R152) RecName: Full=Poly [ADP-ribose] polymerase 1; ... 184 8e-45
AK312339_1(AK312339|pid:none) Homo sapiens cDNA, FLJ92658, highl... 183 1e-44
J03473_1(J03473|pid:none) Human poly(ADP-ribose) synthetase mRNA... 183 1e-44
AB384394_1(AB384394|pid:none) Synthetic construct DNA, clone: pF... 183 1e-44
M17081_1(M17081|pid:none) Human placental poly(ADP-ribose) polym... 183 1e-44
protein update 2009. 4.27
PSORT

psg: 0.69 gvh: 0.23 alm: 0.54 top: 0.53 tms: 0.00 mit: 0.38 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: nuclear
28.0 %: cytoplasmic
20.0 %: mitochondrial
12.0 %: cytoskeletal
4.0 %: extracellular, including cell wall

>> prediction for AHA817 is nuc

5' end seq. ID AHA817F
5' end seq.
>AHA817F.Seq
ATCATTGTTAATAGCAAAAGAAAAATGGCAACAAAAAATACATCTCCTTATGAGATTGAA
TATGCAAAGAGTGATAGATCAACATGTTCAACCTGTCAAAGAGGTATTAATAAAGAAGCA
GTTCGTATTGGTTATAAAACAAAATCAAAACACTTTGATGGAATGGATGTATCATGGCAT
CATTTAAAATGTAAATGTCCACAAGTACCATCATTTACAGATTTAATTCACTGGGAATAC
CTTCGTTGGGAAGACCAATTATCAATTAAAACAACTTATTTTTCATCTGAAAAGTATGAT
CCAAAATCAGCATCAGAGGTACAAAGAGAGAAATATTTAAAGGCATTATGGGAAGTTAAA
GATAGTATTGCCGATAACTTGAAGGGACCAGNGATTAAAAACATCATTCAATATAATAAA
GGTTATGTTGATAAGGTATCACCAGTTCATTTACTTCATACTCTCTCTGATTGGATGTTA
AAAGGTCGTCCAGGTAGATGTCCAACTTGTAAGAATTTCGATATACTTTTCAATGGTATC
GAATATCAATGTAAAGGTTGGATTTCAGGTTTCACAAAATGTGATTGGAAAGGTGATTCA
ATTGAAAGANNNNNNNNNN
Length of 5' end seq. 619
3' end seq. ID AHA817Z
3' end seq.
>AHA817Z.Seq
NNNNNNNNNNTGAATCACTCGAGGGTAACATGATTGAAAATCAATATATTACACTCAAAA
CCAAACTCACTCCCACTTGATAAAGATAGTGTAGTTTATAAAACCTTGGTAGATTATGTT
GCCAATAGTCAAGATAAACAATTTAGAACCAATATCTGTGTTCAAGATATTCTTTCACTT
GAGAGAGAGAATGAAAGTGAACGTTTCACTCCTTGGGCAAAAGATAAGAATAGATTACTC
TTATGGCATGGTAGTAGGTTAACTAATTTCGTATCGATTGTCTCGCAGGGATTAAGAATT
GCTCCACCATCTGCTCCAAAAACTGGTTACAGATTTGGTAAAGGTATTTATTTTGCTGAT
TGTATTAGTAAATCATTCAGCTATTGTTTCACATCAAGTGATTGTCCAACTGCACTTATG
TTATTATGTGAAGTTTCACTTGGTGACATGAATGAATTGAAACATGATACCTATATGGAA
GAGGCACCACATCCATTCCATAGTACAAAAGCTTTAGGTATGGCTGCTCCTCACAAAGAT
GGTAATCATCCTCTTTCTGATTCTGATGGTTTAGTAGTACCATTAGGTAAAATTTCAAAG
ACTGGTCTCTCAACTTCATGTACTCACAATGAATTCATTGTCTATAAAATTGAACAAGTC
AGAATCAAATACATCTTAAGAGTTTACAAGGAAAATAAAATAAAATAAAATTTTTTAAAA
TTA
Length of 3' end seq. 723
Connected seq. ID AHA817P
Connected seq.
>AHA817P.Seq
ATCATTGTTAATAGCAAAAGAAAAATGGCAACAAAAAATACATCTCCTTATGAGATTGAA
TATGCAAAGAGTGATAGATCAACATGTTCAACCTGTCAAAGAGGTATTAATAAAGAAGCA
GTTCGTATTGGTTATAAAACAAAATCAAAACACTTTGATGGAATGGATGTATCATGGCAT
CATTTAAAATGTAAATGTCCACAAGTACCATCATTTACAGATTTAATTCACTGGGAATAC
CTTCGTTGGGAAGACCAATTATCAATTAAAACAACTTATTTTTCATCTGAAAAGTATGAT
CCAAAATCAGCATCAGAGGTACAAAGAGAGAAATATTTAAAGGCATTATGGGAAGTTAAA
GATAGTATTGCCGATAACTTGAAGGGACCAGNGATTAAAAACATCATTCAATATAATAAA
GGTTATGTTGATAAGGTATCACCAGTTCATTTACTTCATACTCTCTCTGATTGGATGTTA
AAAGGTCGTCCAGGTAGATGTCCAACTTGTAAGAATTTCGATATACTTTTCAATGGTATC
GAATATCAATGTAAAGGTTGGATTTCAGGTTTCACAAAATGTGATTGGAAAGGTGATTCA
ATTGAAAGA----------TGAATCACTCGAGGGTAACATGATTGAAAATCAATATATTA
CACTCAAAACCAAACTCACTCCCACTTGATAAAGATAGTGTAGTTTATAAAACCTTGGTA
GATTATGTTGCCAATAGTCAAGATAAACAATTTAGAACCAATATCTGTGTTCAAGATATT
CTTTCACTTGAGAGAGAGAATGAAAGTGAACGTTTCACTCCTTGGGCAAAAGATAAGAAT
AGATTACTCTTATGGCATGGTAGTAGGTTAACTAATTTCGTATCGATTGTCTCGCAGGGA
TTAAGAATTGCTCCACCATCTGCTCCAAAAACTGGTTACAGATTTGGTAAAGGTATTTAT
TTTGCTGATTGTATTAGTAAATCATTCAGCTATTGTTTCACATCAAGTGATTGTCCAACT
GCACTTATGTTATTATGTGAAGTTTCACTTGGTGACATGAATGAATTGAAACATGATACC
TATATGGAAGAGGCACCACATCCATTCCATAGTACAAAAGCTTTAGGTATGGCTGCTCCT
CACAAAGATGGTAATCATCCTCTTTCTGATTCTGATGGTTTAGTAGTACCATTAGGTAAA
ATTTCAAAGACTGGTCTCTCAACTTCATGTACTCACAATGAATTCATTGTCTATAAAATT
GAACAAGTCAGAATCAAATACATCTTAAGAGTTTACAAGGAAAATAAAATAAAATAAAAT
TTTTTAAAATTA
Length of connected seq. 1322
Full length Seq ID -
Full length Seq. -
Length of full length seq. -