>VSG667 (VSG667Q) /CSM/VS/VSG6-C/VSG667Q.Seq.d/
TGTTGAAATCACAATTATTAAAGAAGGTAAAGGTAATATTCCACCAGTTGGTTCAAATGT
AACTGTACATTATGTAGGTACTTTAACTAATGGTACCGTTTTTGATTCATCAAGAAAGAG
AGGCCAACCATTTAATTTTAAACTTGGTGCTGGTCAAGTCATCAAAGGTTGGGATGAAGG
TGTTGCTAAAATGAAAGTTGGTGAAACCTCAAAATTAACCATTAGCCCAGATTTTGGATA
TGGTGCTAGAGGTGCTGGTGGTGTTATTCCACCAAATGCAACACTTGTCTTTGAAGTAGA
ATTAATCACATTTAAATAAAGAGATGAAGAATTATTCAAATAAATTTAAGGGAATTTTAA
TATTGGTTAACAAATATATTTTCTCGATTATGATTTTTTAAATCNNAAAAAAAAXXXXXX
XXXX

VEITIIKEGKGNIPPVGSNVTVHYVGTLTNGTVFDSSRKRGQPFNFKLGAGQVIKGWDEG
VAKMKVGETSKLTISPDFGYGARGAGGVIPPNATLVFEVELITFK*rdeelfk*i*gnfn
ig*qiyfldydflnxkk---

Frame A:
c*nhny*rr*r*ystswfkcnctlcryfn*wyrf*fikkerpti*f*twcwsshqrlg*r
cc*nesw*nlkinh*prfwiwc*rcwwcystkcntcl*srinhi*ikr*riiqinlref*
ywltnifsrl*ffksxk---


Frame B:
VEITIIKEGKGNIPPVGSNVTVHYVGTLTNGTVFDSSRKRGQPFNFKLGAGQVIKGWDEG
VAKMKVGETSKLTISPDFGYGARGAGGVIPPNATLVFEVELITFK*rdeelfk*i*gnfn
ig*qiyfldydflnxkk---


Frame C:
lksqllkkvkvifhqlvqm*lyim*vl*lmvpflihqereanhlilnlvlvksskvgmkv
llk*klvkpqn*plaqildmvlevlvvlfhqmqhlslk*n*shlnkemknysnkfkgili
lvnkyifsimif*ixkk---

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSG667 (VSG667Q) /CSM/VS/VSG6-C/VSG667Q.Seq.d/                        801   0.0
VSF517 (VSF517Q) /CSM/VS/VSF5-A/VSF517Q.Seq.d/                        801   0.0
VSF243 (VSF243Q) /CSM/VS/VSF2-B/VSF243Q.Seq.d/                        801   0.0
VFE394 (VFE394Q) /CSM/VF/VFE3-D/VFE394Q.Seq.d/                        801   0.0
VSJ835 (VSJ835Q) /CSM/VS/VSJ8-B/VSJ835Q.Seq.d/                        795   0.0
VSD731 (VSD731Q) /CSM/VS/VSD7-B/VSD731Q.Seq.d/                        793   0.0
VSA260 (VSA260Q) /CSM/VS/VSA2-C/VSA260Q.Seq.d/                        785   0.0
FC-BS02 (FC-BS02Q) /CSM/FC/FC-BS/FC-BS02Q.Seq.d/                      747   0.0
VHD376 (VHD376Q) /CSM/VH/VHD3-D/VHD376Q.Seq.d/                        737   0.0
VSE335 (VSE335Q) /CSM/VS/VSE3-B/VSE335Q.Seq.d/                        367   e-101

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map 1005175-1418323 strain AX4, complete sequence.   258  0.0  9
AW773430|AW773430.1 rp08d05.y1 Kloek Brook Zeldia punctata SL1 Zeldia punctata cDNA 5' similar to WP:Y18D10A.19C CE21417 ;, mRNA sequence.    64  4e-09  2
BP186674|BP186674.1 Dugesia japonica cDNA, clone: 01257_HH, expressed in the head.    38  9e-09  4
CB909775|CB909775.1 USDA-FP_101518 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-21_G11 5', mRNA sequence.    54  2e-07  2
CB909815|CB909815.1 USDA-FP_101558 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-22_C10 5', mRNA sequence.    54  2e-07  2
CD451091|CD451091.1 USDA-FP_103145 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-42_B01 5', mRNA sequence.    54  2e-07  2
CB832731|CB832731.1 USDA-FP_100526 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-07_G04 5', mRNA sequence.    54  3e-07  2
CD450786|CD450786.1 USDA-FP_102764 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-38_B02 5', mRNA sequence.    54  3e-07  2
CD451804|CD451804.1 USDA-FP_104110 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-51_A11 5', mRNA sequence.    54  3e-07  2
CB814948|CB814948.1 USDA-FP_100421 Adult Alate Brown Citrus Aphid Toxoptera citricida cDNA clone WHWTC-06_E11 5', mRNA sequence.    54  3e-07  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000806_3024(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu...   146   2e-34
AM746676_3800(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...   139   4e-32
CP000828_1721(CP000828|pid:none) Acaryochloris marina MBIC11017,...   138   7e-32
AJ634777_1(AJ634777|pid:none) Suberites ficus mRNA for putative ...   137   8e-32
AP009552_5437(AP009552|pid:none) Microcystis aeruginosa NIES-843...   136   2e-31
DQ443423_1(DQ443423|pid:none) Bombyx mori FK506-binding protein ...   136   2e-31
CP000393_1227(CP000393|pid:none) Trichodesmium erythraeum IMS101...   135   6e-31
AJ278329_1(AJ278329|pid:none) Suberites domuncula mRNA for putat...   134   9e-31
CP000113_6680(CP000113|pid:none) Myxococcus xanthus DK 1622, com...   133   2e-30
CP000116_2152(CP000116|pid:none) Thiobacillus denitrificans ATCC...   133   2e-30

 psg: 0.83  gvh: 0.38  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.22  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  4.0 %: cytoskeletal
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for VSG667 is cyt

>VSG667F.Seq
TGTTGAAATCACAATTATTAAAGAAGGTAAAGGTAATATTCCACCAGTTGGTTCAAATGT
AACTGTACATTATGTAGGTACTTTAACTAATGGTACCGTTTTTGATTCATCAAGAAAGAG
AGGCCAACCATTTAATTTTAAACTTGGTGCTGGTCAAGTCATCAAAGGTTGGGATGAAGG
TGTTGCTAAAATGAAAGTTGGTGAAACCTCAAAATTAACCATTAGCCCAGATTTTGGATA
TGGTGCTAGAGGTGCTGGTGGTGTTATTCCACCAAATGCAACACTTGTCTTTGAAGTAGA
ATTAATCACATTTAAATAAAGAGATGAAGAATTATTCAAATAAATTTAAGGGAATTTTAA
TATTGGTTAACAAATATATTTTCTCGATTATGATTTTTTAAATCNNAAAAAAAA------
----