>VSE765 (VSE765Q) /CSM/VS/VSE7-C/VSE765Q.Seq.d/
XXXXXXXXXXCAGCAACCAATATTCCAATGGTTACATTCATTTCAAATGTTGAAGAATTT
GTTAAAGATAAAGATGTTGAAAATGTTTTCAAACAATTACAAGAAGCATATCAAAAATAT
AAATTTTTTGAATCAAAACTTTCAAATAATATTTCAATGTTAACTCAAAGATCAAAACAA
TTACAAGAATCTTTAGATATTGTCGATCATGTTGAAAATAAATCTAATGAATCATTTTCA
GTACAATATGAACTTTCAGAAGGTGTTTACTCTTCAGCACAAGTAAATGAACCAAAATCA
ATTTATTTATGGTTAGGTGCAAATGTAATGTTGGAATATTCATTTGAAGAAGCAAGAGAG
GTATTAAGAAAGAATAAAGATACAGTCGATCGTCAACTTAGTGAGAGCATTCAAGATTTA
GGTTTTGTAAAGGATCAAATCACTACAACTGATGTTAACGTTTCACGTGTTTACAATTAT
GATATCATTCAAAAAAGAAAATTAAAACTATCAGGTAAAACTGAAGAAGAGGAAAAATAA
AAAAAAAAAAAATAAAAAAAGTAAAAATAAAAATATAATTAACTTTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

---ATNIPMVTFISNVEEFVKDKDVENVFKQLQEAYQKYKFFESKLSNNISMLTQRSKQL
QESLDIVDHVENKSNESFSVQYELSEGVYSSAQVNEPKSIYLWLGANVMLEYSFEEAREV
LRKNKDTVDRQLSESIQDLGFVKDQITTTDVNVSRVYNYDIIQKRKLKLSGKTEEEEK*k
kkk*kk*k*kyn*l*kkkkkkkkk

Frame A:
---snqysngyihfkc*ric*r*rc*kcfqtitrsiski*if*iktfk*yfnvnskikti
trifrycrsc*k*i**iifsti*tfrrcllfstsk*tkinlfmvrckcnvgifi*rskrg
ikke*rysrsst**ehsrfrfckgsnhyn*c*rftclql*yhskkkiktir*n*rrgkik
kkkikkvkiki*ltlkkkkkkkkk


Frame B:
---ATNIPMVTFISNVEEFVKDKDVENVFKQLQEAYQKYKFFESKLSNNISMLTQRSKQL
QESLDIVDHVENKSNESFSVQYELSEGVYSSAQVNEPKSIYLWLGANVMLEYSFEEAREV
LRKNKDTVDRQLSESIQDLGFVKDQITTTDVNVSRVYNYDIIQKRKLKLSGKTEEEEK*k
kkk*kk*k*kyn*l*kkkkkkkkk


Frame C:
---qpifqwlhsfqmlknllkikmlkmfsnnykkhikninflnqnfqiifqc*lkdqnny
knl*ilsimlkinlmnhfqynmnfqkvftlqhk*mnqnqfiyg*vqm*cwnihlkkqery
*erikiqsivnlvrafki*vl*rikslqlmltfhvftimisfkken*nyqvklkkrknkk
kknkksknkniinfkkkkkkkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSE765 (VSE765Q) /CSM/VS/VSE7-C/VSE765Q.Seq.d/                        952   0.0
VSE760 (VSE760Q) /CSM/VS/VSE7-C/VSE760Q.Seq.d/                        952   0.0
SSE728 (SSE728Q) /CSM/SS/SSE7-B/SSE728Q.Seq.d/                        952   0.0
SSJ203 (SSJ203Q) /CSM/SS/SSJ2-A/SSJ203Q.Seq.d/                        759   0.0
VSA801 (VSA801Q) /CSM/VS/VSA8-A/VSA801Q.Seq.d/                        617   e-176
SSA756 (SSA756Q) /CSM/SS/SSA7-C/SSA756Q.Seq.d/                        539   e-152
VSJ381 (VSJ381Q) /CSM/VS/VSJ3-D/VSJ381Q.Seq.d/                         42   0.010
VSG334 (VSG334Q) /CSM/VS/VSG3-B/VSG334Q.Seq.d/                         42   0.010
VSG195 (VSG195Q) /CSM/VS/VSG1-D/VSG195Q.Seq.d/                         42   0.010
VSF777 (VSF777Q) /CSM/VS/VSF7-D/VSF777Q.Seq.d/                         42   0.010

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

BU725646|BU725646.1 SJMCIC11 SJM Schistosoma japonicum cDNA, mRNA sequence.    44  0.002  2
AI730233|AI730233.1 BNLGHi6413 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to HYPOTHETICAL 20.9 KD PROTEIN T06G6.9 IN, mRNA sequence.    50  0.033  1
BQ405182|BQ405182.1 GA__Ed0079F05f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0079F05f, mRNA sequence.    50  0.033  1
BQ402737|BQ402737.1 GA__Ed0051C10r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0051C10r, mRNA sequence.    50  0.033  1
BH920636|BH920636.1 odh75g09.g1 B.oleracea002 Brassica oleracea genomic, DNA sequence.    50  0.033  1
BQ402736|BQ402736.1 GA__Ed0051C10f Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0051C10f, mRNA sequence.    50  0.033  1
BQ413860|BQ413860.1 GA__Ed0079F05r Gossypium arboreum 7-10 dpa fiber library Gossypium arboreum cDNA clone GA__Ed0079F05r, mRNA sequence.    50  0.033  1
CC306906|CC306906.1 TAM32-7F14_EC1.1 TAM32 Gallus gallus genomic clone TAM32-7F14, DNA sequence.    50  0.033  1
AE014825|AE014825.1 Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence.    34  0.093  8
D83749|D83749.1 Bean yellow mosaic virus genomic RNA for polyprotein, complete cds.    44  0.095  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001333_264(CP001333|pid:none) Micromonas sp. RCC299 chromosome...   131   2e-29
BC054252_1(BC054252|pid:none) Xenopus laevis von Hippel-Lindau b...   127   3e-28
BC092334_1(BC092334|pid:none) Xenopus laevis hypothetical protei...   125   7e-28
BT047875_1(BT047875|pid:none) Salmo salar clone ssal-evf-520-165...   124   2e-27
BX908789_18(BX908789|pid:none) Neurospora crassa DNA linkage gro...   124   2e-27
AY890868_1(AY890868|pid:none) Synthetic construct Homo sapiens c...   124   2e-27
BC132169_1(BC132169|pid:none) Mus musculus von Hippel-Lindau bin...   124   2e-27
EF087700_1(EF087700|pid:none) Picea sitchensis clone WS02736_B07...   124   3e-27
(P61758) RecName: Full=Prefoldin subunit 3; AltName: Full=Von Hi...   123   4e-27
AM502244_135(AM502244|pid:none) Leishmania infantum chromosome 26.    121   2e-26

 psg: 0.94  gvh: 0.30  alm: 0.48  top: 0.33  tms: 0.00  mit: 0.19  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 36.0 %: nuclear
	  4.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for VSE765 is cyt

>VSE765Z.Seq
----------CAGCAACCAATATTCCAATGGTTACATTCATTTCAAATGTTGAAGAATTT
GTTAAAGATAAAGATGTTGAAAATGTTTTCAAACAATTACAAGAAGCATATCAAAAATAT
AAATTTTTTGAATCAAAACTTTCAAATAATATTTCAATGTTAACTCAAAGATCAAAACAA
TTACAAGAATCTTTAGATATTGTCGATCATGTTGAAAATAAATCTAATGAATCATTTTCA
GTACAATATGAACTTTCAGAAGGTGTTTACTCTTCAGCACAAGTAAATGAACCAAAATCA
ATTTATTTATGGTTAGGTGCAAATGTAATGTTGGAATATTCATTTGAAGAAGCAAGAGAG
GTATTAAGAAAGAATAAAGATACAGTCGATCGTCAACTTAGTGAGAGCATTCAAGATTTA
GGTTTTGTAAAGGATCAAATCACTACAACTGATGTTAACGTTTCACGTGTTTACAATTAT
GATATCATTCAAAAAAGAAAATTAAAACTATCAGGTAAAACTGAAGAAGAGGAAAAATAA
AAAAAAAAAAAATAAAAAAAGTAAAAATAAAAATATAATTAACTTTAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA