>VSE737 (VSE737Q) /CSM/VS/VSE7-B/VSE737Q.Seq.d/
XXXXXXXXXXGAACCTGTATTATTCGCTGGTTCAATCAAAGATAATATCACTTTTGGTAA
TGATAGTGCAACAATGGATCAAATTATTTCGGCTGCAGAGAAAGCAAATGCTCATTCATT
CATTGAAGAGTTTGAAAATGGTTATGATACTATAGTTGGTGAAAGAGGTGTTCGTTTATC
TGGTGGTCAAAAACAACGTGTTGCAATAGCTCGTGCTATGATTCAAAATCCAATGATCCT
CTTATTAGATGAAGCTACCTCTGCTCTTGATGCTGAAAGTGAATATTTAGTTAAACAAGC
AATCGATGAAATTATGAAAGATCGTACTGTCATTGTAATTGCTCATCGTTTATCAACTGT
AATAAATGCAAATACTGTAGTTGTAATTAATCAAGGTAAAATTGAAGAAATGGGTACTCA
TAAAGAATTATTAAATAATACTGATGGAATTTATCATAATTTAGTAAAAAGACAATTATC
TTCTGATGATTAAAAAAAAAAAAAATAAAAAAAAAAAAAA

---PVLFAGSIKDNITFGNDSATMDQIISAAEKANAHSFIEEFENGYDTIVGERGVRLSG
GQKQRVAIARAMIQNPMILLLDEATSALDAESEYLVKQAIDEIMKDRTVIVIAHRLSTVI
NANTVVVINQGKIEEMGTHKELLNNTDGIYHNLVKRQLSSDD*kkkk*kkkk

Frame A:
---nlyyslvqskiisllvmivqqwiklfrlqrkqmlihslkslkmvmil*lvkevfvyl
vvknnvlq*lvl*fkiq*ssy*mklplllmlkvni*lnkqsmkl*kivlsl*llivyql*
*mqil*l*likvklkkwvlikny*iilmefiii**kdnyllmikkkknkkkk


Frame B:
---tciirwfnqr*yhfw***cnngsnyfgcreskcsfih*rv*kwl*yysw*krcsfiw
wskttccnsscydsksndplir*sylcs*c*k*ifs*tsnr*nyersychcncssfincn
kckycscn*sr*n*rngys*riik*y*wnls*fskktiif**lkkkkikkkk


Frame C:
---PVLFAGSIKDNITFGNDSATMDQIISAAEKANAHSFIEEFENGYDTIVGERGVRLSG
GQKQRVAIARAMIQNPMILLLDEATSALDAESEYLVKQAIDEIMKDRTVIVIAHRLSTVI
NANTVVVINQGKIEEMGTHKELLNNTDGIYHNLVKRQLSSDD*kkkk*kkkk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSE737 (VSE737Q) /CSM/VS/VSE7-B/VSE737Q.Seq.d/                        954   0.0
CHL690 (CHL690Q) /CSM/CH/CHL6-D/CHL690Q.Seq.d/                        912   0.0
VFH771 (VFH771Q) /CSM/VF/VFH7-C/VFH771Q.Seq.d/                        894   0.0
VFJ339 (VFJ339Q) /CSM/VF/VFJ3-B/VFJ339Q.Seq.d/                        876   0.0
SSL321 (SSL321Q) /CSM/SS/SSL3-A/SSL321Q.Seq.d/                        351   7e-96
VHO795 (VHO795Q) /CSM/VH/VHO7-D/VHO795Q.Seq.d/                        109   4e-23
VHH755 (VHH755Q) /CSM/VH/VHH7-C/VHH755Q.Seq.d/                        107   2e-22
CHS252 (CHS252Q) /CSM/CH/CHS2-C/CHS252Q.Seq.d/                        107   2e-22
CHK485 (CHK485Q) /CSM/CH/CHK4-D/CHK485Q.Seq.d/                        107   2e-22
CHE875 (CHE875Q) /CSM/CH/CHE8-D/CHE875Q.Seq.d/                        107   2e-22

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AF466304|AF466304.1 Dictyostelium discoideum ABC transporter AbcB1 (abcB1) gene, complete cds.   940  0.0  1
AF466305|AF466305.1 Dictyostelium discoideum ABC transporter AbcB2 (abcB2) gene, complete cds.   105  1e-29  4
L26287|L26287.1 Schistosoma mansoni SMDR2 gene, complete cds.     66  3e-14  5
AF466307|AF466307.2 Dictyostelium discoideum ABC transporter AbcB4 (abcB4) gene, complete cds.    82  5e-12  2
AF474340|AF474340.1 Dictyostelium discoideum ABC transporter ABCC.8 (abcC8) gene, complete cds.    68  7e-08  2
U62929|U62929.1 Filobasidiella neoformans multidrug resistance protein 1 (mdr1) mRNA, complete cds.    40  8e-08  4
U62930|U62930.1 Filobasidiella neoformans multidrug resistance protein 1 (mdr1) gene, promoter region and complete cds.    40  2e-07  4
U01056|U01056.1 Entamoeba histolytica HM-1:IMSS P-glycoprotein 6 (EhPGP6) gene complete cds.    42  9e-07  4
AZ539542|AZ539542.1 ENTDK30TR Entamoeba histolytica Sheared DNA Entamoeba histolytica genomic, DNA sequence.    42  1e-06  3
AB035331|AB035331.1 Physarum polycephalum PPABC18 mRNA for ABC protein, complete cds.    60  3e-06  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB035331_1(AB035331|pid:none) Physarum polycephalum PPABC18 mRNA...   186   4e-46
U35123_1(U35123|pid:none) Urechis caupo p-glycoprotein mRNA, par...   182   6e-45
AF466307_1(AF466307|pid:none) Dictyostelium discoideum ABC trans...   181   1e-44
(Q9LSJ5) RecName: Full=Putative multidrug resistance protein 20;...   177   2e-43
AF000264_2(AF000264|pid:none) Caenorhabditis elegans cosmid F43E...   176   2e-43
AY078410_1(AY078410|pid:none) Arabidopsis thaliana transporter a...   176   3e-43
(Q0WML0) RecName: Full=Antigen peptide transporter-like 2; AltNa...   176   3e-43
AC144728_18(AC144728|pid:none) Medicago truncatula clone mth2-6g...   175   5e-43
AB043999_1(AB043999|pid:none) Coptis japonica Cjmdr1 mRNA, compl...   175   7e-43
AF466305_1(AF466305|pid:none) Dictyostelium discoideum ABC trans...   174   1e-42

 psg: 0.66  gvh: 0.33  alm: 0.40  top: 0.53  tms: 0.00  mit: 0.14  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: nuclear
	 40.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: vesicles of secretory system

>> prediction for VSE737 is nuc

>VSE737Z.Seq
----------GAACCTGTATTATTCGCTGGTTCAATCAAAGATAATATCACTTTTGGTAA
TGATAGTGCAACAATGGATCAAATTATTTCGGCTGCAGAGAAAGCAAATGCTCATTCATT
CATTGAAGAGTTTGAAAATGGTTATGATACTATAGTTGGTGAAAGAGGTGTTCGTTTATC
TGGTGGTCAAAAACAACGTGTTGCAATAGCTCGTGCTATGATTCAAAATCCAATGATCCT
CTTATTAGATGAAGCTACCTCTGCTCTTGATGCTGAAAGTGAATATTTAGTTAAACAAGC
AATCGATGAAATTATGAAAGATCGTACTGTCATTGTAATTGCTCATCGTTTATCAACTGT
AATAAATGCAAATACTGTAGTTGTAATTAATCAAGGTAAAATTGAAGAAATGGGTACTCA
TAAAGAATTATTAAATAATACTGATGGAATTTATCATAATTTAGTAAAAAGACAATTATC
TTCTGATGATTAAAAAAAAAAAAAATAAAAAAAAAAAAAA