>VSE157 (VSE157Q) /CSM/VS/VSE1-C/VSE157Q.Seq.d/
XXXXXXXXXXTGTGCCACTAAATACCCACATGCTGCCAGATGGTTCAATACCATTGCCTC
ATACAGTGCTGCCGAACAAGGTCAATTCGAAAAAGTTACCGAAACCGTCACTATTGCCGC
CCCAGCTGCACCAAAAGCTGATGATGACGTTGATCTCTTTGGTTCCGATGATGAAGATGA
TGAAGAATACGAAAGACAATTAGAAGAAAGACGTAAGAAAGCTATGGAACACAAAAAACC
AAAGGAAACCGTCATTGCTAAATCTTCAATTCTCTTGGATGTTAAGCCATGGGATGATGA
AACCGATATGGTCGAATTAGAAAAATGCGTTCGTTCAATTGAAATGGACGGTTTAGTCTG
GGGTGCCTCAAAACTCGTTGCCGTTGGTTATGGTATCAAAAAGTTAGTCATCAATTTAGT
CGTCGAAGATCTTAAAGTTTCAACCGATGAATTAGAAGAAAAAATTAAAGATTTCGAAGA
TTACGTCCAATCCGTTGATGTTGCTGCTTTCAATAAAATCTAAATTGTTTGTTTTTTTTT
AAAAAGACAACAAAAATTATATTATAATAACCTTTTTTTCCAATAAATATGTTGTTTTGT
AAAG

---ATKYPHAARWFNTIASYSAAEQGQFEKVTETVTIAAPAAPKADDDVDLFGSDDEDDE
EYERQLEERRKKAMEHKKPKETVIAKSSILLDVKPWDDETDMVELEKCVRSIEMDGLVWG
ASKLVAVGYGIKKLVINLVVEDLKVSTDELEEKIKDFEDYVQSVDVAAFNKI*ivcfflk
rqqklyynnlffq*iccfvk

Frame A:
---vplnthmlpdgsiplphtvlpnkvnskklpkpsllppqlhqklmmtlislvpmmkmm
kntkdn*kkdvrklwntknqrkpsllnlqfswmlshgmmkpiwsn*knafvqlkwtv*sg
vpqnslplvmvsks*ssi*sskilkfqpmn*kkklkiskitsnplmlllsiksklfvff*
kdnknyiiitffsnkyvvl*


Frame B:
---ch*iptccqmvqyhcliqccrtrsirksyrnrhycrpsctks***r*slwfr**r**
rirktirrkt*esygtqktkgnrhc*ifnslgc*amg**nrygrirkmrsfn*ngrfslg
clktrcrwlwyqkvshqfsrrrs*sfnr*irrkn*rfrrlrpir*cccfq*nlnclfffk
kttkiil**pffpinmlfck


Frame C:
---ATKYPHAARWFNTIASYSAAEQGQFEKVTETVTIAAPAAPKADDDVDLFGSDDEDDE
EYERQLEERRKKAMEHKKPKETVIAKSSILLDVKPWDDETDMVELEKCVRSIEMDGLVWG
ASKLVAVGYGIKKLVINLVVEDLKVSTDELEEKIKDFEDYVQSVDVAAFNKI*ivcfflk
rqqklyynnlffq*iccfvk

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSE157 (VSE157Q) /CSM/VS/VSE1-C/VSE157Q.Seq.d/                       1082   0.0
FC-AU19 (FC-AU19Q) /CSM/FC/FC-AU/FC-AU19Q.Seq.d/                     1082   0.0
FC-AL21 (FC-AL21Q) /CSM/FC/FC-AL/FC-AL21Q.Seq.d/                     1082   0.0
FC-216 (FC-216Q) /CSM/CG/CG-FC/FC-216Q.Seq.d/                        1082   0.0
SFD876 (SFD876Q) /CSM/SF/SFD8-D/SFD876Q.Seq.d/                       1066   0.0
FC-AW11 (FC-AW11Q) /CSM/FC/FC-AW/FC-AW11Q.Seq.d/                     1037   0.0
VSH378 (VSH378Q) /CSM/VS/VSH3-D/VSH378Q.Seq.d/                       1033   0.0
VFN577 (VFN577Q) /CSM/VF/VFN5-D/VFN577Q.Seq.d/                        680   0.0
VHC364 (VHC364Q) /CSM/VH/VHC3-C/VHC364Q.Seq.d/                         46   6e-04
SLA125 (SLA125Q) /CSM/SL/SLA1-B/SLA125Q.Seq.d/                         46   6e-04

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

U15926|U15926.1 Dictyostelium discoideum elongation factor 1 beta (eEF1beta) mRNA, complete cds.  1033  0.0  2
AB007025|AB007025.1 Dictyostelium discoideum DdEF1b mRNA for elongation factor 1b, complete cds.   547  0.0  4
AW199133|AW199133.1 da12a10.x1 Xenopus laevis oocyte Xenopus laevis cDNA clone XENOPUS_SOURCE_ID:xlnoc003m19 3' similar to gb:X60489 ELONGATION FACTOR 1-BETA (HUMAN);, mRNA sequence.    52  5e-21  4
AW764698|AW764698.1 da91a02.x1 Xenopus laevis tadpole stage 24 Xenopus laevis cDNA clone IMAGE: 3' similar to gb:X60489 ELONGATION FACTOR 1-BETA (HUMAN);, mRNA sequence.    52  6e-21  4
BQ400397|BQ400397.1 NISC_mp09a10.x1 NICHD XGC Sp1 Xenopus laevis cDNA clone IMAGE:4968858 3', mRNA sequence.    52  7e-21  4
BG554212|BG554212.1 de96d08.x3 Wellcome CRC pRN3 St19 26 Xenopus laevis cDNA clone IMAGE:3549375 3' similar to SW:EF1B_XENLA P30151 ELONGATION FACTOR 1-BETA ;, mRNA sequence.    52  1e-20  4
BQ399560|BQ399560.1 NISC_mp04c04.x1 NICHD XGC Sp1 Xenopus laevis cDNA clone IMAGE:4965511 3', mRNA sequence.    52  1e-20  4
BG554583|BG554583.1 de96d08.x2 Wellcome CRC pRN3 St19 26 Xenopus laevis cDNA clone IMAGE:3549375 3' similar to SW:EF1B_XENLA P30151 ELONGATION FACTOR 1-BETA ;, mRNA sequence.    52  1e-20  4
BQ400538|BQ400538.1 NISC_mp09h05.x1 NICHD XGC Sp1 Xenopus laevis cDNA clone IMAGE:4969184 3', mRNA sequence.    52  1e-20  4
BU909599|BU909599.1 AGENCOURT_10482312 NICHD XGC Emb1 Xenopus laevis cDNA clone IMAGE:6635280 5', mRNA sequence.    52  1e-20  4

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q9GRF8) RecName: Full=Elongation factor 1-beta; AltName: Full=D...   270   2e-71
AB007025_1(AB007025|pid:none) Dictyostelium discoideum DdEF1b mR...   241   2e-62
DQ673433_1(DQ673433|pid:none) Diaphorina citri putative elongati...   164   2e-39
EF633904_1(EF633904|pid:none) Ornithodoros parkeri clone OP-323 ...   160   2e-38
EZ000417_1(EZ000417|pid:none) TSA: Culex tarsalis Ctar-253 elong...   157   2e-37
(P29522) RecName: Full=Elongation factor 1-beta';  &D13339_1(D13...   157   2e-37
EF677605_1(EF677605|pid:none) Picea sitchensis clone WS02771_J13...   157   3e-37
EU258621_1(EU258621|pid:none) Spodoptera exigua elongation facto...   156   5e-37
AB180443_1(AB180443|pid:none) Plutella xylostella eEF-1 beta' mR...   155   8e-37
(P12262) RecName: Full=Elongation factor 1-beta;          Short=...   154   1e-36

 psg: 0.85  gvh: 0.42  alm: 0.33  top: 0.37  tms: 0.00  mit: 0.35  mip: 0.03
 nuc: 0.07  erl: 0.00  erm: 0.20  pox: 0.30  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 44.0 %: cytoplasmic
	 28.0 %: mitochondrial
	 24.0 %: nuclear
	  4.0 %: cytoskeletal

>> prediction for VSE157 is cyt

>VSE157Z.Seq
----------TGTGCCACTAAATACCCACATGCTGCCAGATGGTTCAATACCATTGCCTC
ATACAGTGCTGCCGAACAAGGTCAATTCGAAAAAGTTACCGAAACCGTCACTATTGCCGC
CCCAGCTGCACCAAAAGCTGATGATGACGTTGATCTCTTTGGTTCCGATGATGAAGATGA
TGAAGAATACGAAAGACAATTAGAAGAAAGACGTAAGAAAGCTATGGAACACAAAAAACC
AAAGGAAACCGTCATTGCTAAATCTTCAATTCTCTTGGATGTTAAGCCATGGGATGATGA
AACCGATATGGTCGAATTAGAAAAATGCGTTCGTTCAATTGAAATGGACGGTTTAGTCTG
GGGTGCCTCAAAACTCGTTGCCGTTGGTTATGGTATCAAAAAGTTAGTCATCAATTTAGT
CGTCGAAGATCTTAAAGTTTCAACCGATGAATTAGAAGAAAAAATTAAAGATTTCGAAGA
TTACGTCCAATCCGTTGATGTTGCTGCTTTCAATAAAATCTAAATTGTTTGTTTTTTTTT
AAAAAGACAACAAAAATTATATTATAATAACCTTTTTTTCCAATAAATATGTTGTTTTGT
AAAG