>VSD761 (VSD761Q) /CSM/VS/VSD7-C/VSD761Q.Seq.d/
XXXXXXXXXXTANCCCAACNGNTTTGAAAGNTTTAANTGAGGNTAATGANAAAANAACCC
CAANTTGGTCCAANTAAAANTGAAAAAAAAAAANACAAAACCNAAAAGNCNATAAAAACN
TTTTAAAAATAAAAGATAAAAAAAAA

---xqxx*kx*XRXMXKXPQXGPXKXEKKKXKTXKXIKTF*k*kikk

Frame A:
---xptxlkxlxexnxkxtpxwsx*x*kkkxqnxkxxknxlkikdkkk


Frame B:
---xqxx*kx*XRXMXKXPQXGPXKXEKKKXKTXKXIKTF*k*kikk


Frame C:
---pnxfexfx*g**xxnpxlvqxkxkkkxtkpkxx*kxfknkr*kk

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Gapped
Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 0
Number of Sequences: 97611
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10.0: 0
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 0
length of query: 146
length of database: 80,480,566
effective HSP length: 17
effective length of query: 129
effective length of database: 78,821,179
effective search space: 10167932091
effective search space used: 10167932091
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

 ***** No hits found ******

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 5,045,593
Number of extensions: 232834
Number of successful extensions: 357
Number of sequences better than 10.0: 0
Length of query: 146
Length of database: 104,622,809,269
Length adjustment: 22
Effective length of query: 124
Effective length of database: 102,296,446,593
Effective search space: 12684759377532
Effective search space used: 12684759377532
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 61,539,658

 psg: 0.63  gvh: 0.25  alm: 0.85  top: 0.53  tms: 0.00  mit: 0.38  mip: 0.00
 nuc: 0.24  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: nuclear
	 24.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  8.0 %: cytoplasmic
	  4.0 %: plasma membrane
	  4.0 %: endoplasmic reticulum

>> prediction for VSD761 is nuc

>VSD761Z.Seq
----------TANCCCAACNGNTTTGAAAGNTTTAANTGAGGNTAATGANAAAANAACCC
CAANTTGGTCCAANTAAAANTGAAAAAAAAAAANACAAAACCNAAAAGNCNATAAAAACN
TTTTAAAAATAAAAGATAAAAAAAAA