>VSD680 (VSD680Q) /CSM/VS/VSD6-D/VSD680Q.Seq.d/
XXXXXXXXXXATGTCAGTAGATCCAAAACAATCAAAAATAGCAGATGTATTCGAAAGATG
TGATGTTTTAGAGAGTTTTCCATTTCATGATGATNCAATCAGAGATTGAAGAACAATCAC
CAAGTATT

---SVDPKQSKIADVFERCDVLESFPFHDDXIRD*rtitky

Frame A:
---cq*iqnnqk*qmyskdvmf*rvfhfmmxqseieeqspsi


Frame B:
---vsrsktiknsrcirkm*cfrefsis**xnqrlknnhqv


Frame C:
---SVDPKQSKIADVFERCDVLESFPFHDDXIRD*rtitky

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSD680 (VSD680Q) /CSM/VS/VSD6-D/VSD680Q.Seq.d/                        228   1e-59
SSI314 (SSI314Q) /CSM/SS/SSI3-A/SSI314Q.Seq.d/                         34   0.45
VHQ448 (VHQ448Q) /CSM/VH/VHQ4-B/VHQ448Q.Seq.d/                         32   1.8
SSL132 (SSL132Q) /CSM/SS/SSL1-B/SSL132Q.Seq.d/                         32   1.8
SSH337 (SSH337Q) /CSM/SS/SSH3-B/SSH337Q.Seq.d/                         32   1.8
SSA145 (SSA145Q) /CSM/SS/SSA1-B/SSA145Q.Seq.d/                         32   1.8
SLK613 (SLK613Q) /CSM/SL/SLK6-A/SLK613Q.Seq.d/                         32   1.8
SLH757 (SLH757Q) /CSM/SL/SLH7-C/SLH757Q.Seq.d/                         32   1.8
CFI584 (CFI584Q) /CSM/CF/CFI5-D/CFI584Q.Seq.d/                         32   1.8
AHG527 (AHG527Q) /CSM/AH/AHG5-B/AHG527Q.Seq.d/                         32   1.8

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU264410) Dictyostelium discoideum vegetative cDNA clone:VS...   228   4e-56  1
(AY368270) Dictyostelium discoideum Rac-binding component of...   167   2e-51  2
(FP325182) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   0.29   1
(FP312633) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   0.29   1
(AM643839) Entamoeba moshkovskii FIC GSS, clone mosh003a08.p1k.    34   0.38   2
(DX124296) OG_ABa0152E20.f OG_ABa Oryza granulata genomic cl...    34   3.0    2
(CZ614057) OM__Ba0141O08.f OM__Ba Oryza minuta genomic clone...    34   3.1    2
(CZ041063) OM__Ba0023D03.f OM__Ba Oryza minuta genomic clone...    34   3.1    2
(CR933520) Zebrafish DNA sequence from clone CH211-28A20 in ...    42   4.5    1
(AL807792) Zebrafish DNA sequence from clone CH211-247L22 in...    42   4.5    1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q6UK63) RecName: Full=Protein pirA;  &AY368270_1(AY368270|pid:n...    62   2e-10

 psg: 0.59  gvh: 0.29  alm: 0.55  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	 12.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for VSD680 is cyt

>VSD680Z.Seq
----------ATGTCAGTAGATCCAAAACAATCAAAAATAGCAGATGTATTCGAAAGATG
TGATGTTTTAGAGAGTTTTCCATTTCATGATGATNCAATCAGAGATTGAAGAACAATCAC
CAAGTATT