>VSC702 (VSC702Q) /CSM/VS/VSC7-A/VSC702Q.Seq.d/
XXXXXXXXXXAACTTTTTGGACATTCAATTGTTGGTAAAGCAATTTGGTTTTGTTTATAT
TCAATTGTAATTGCATGTAGATCAGTTTTCTATCCATTAAAGAATCAATCACCATTCAGT
ATGTGGTTAGTTGCTAATTACATTTGTAATATTACATTCACTTATGTAATCTTCCAATGG
GTTGGTGTTTATGGTATGACTTATTTAGTATTATCAAGTTTAATGTCTGTTGGTTTCCTT
TTACATCCATTAGGTGCTCGTTGGATCGCTGAACATTTCGCTGTTACTCAATCAGAACAA
GAAACTTATTCAACTTATGGTTTAATTAATACCATTGGTTTCAATATTGGTTATCATAAT
GAACATCATGATTTCGTTCGTGTTCCATACGTTTATTTACCAACTCTCACTAAAGTTGCT
CATGAATTCTATAAAGGTGGTCTTAAATATCATACTTCCTATTGGAGAGTTTTATATGAA
TTCTTAAATCAAGATGGTTTCACTTTTAATAGTAGAGTAGTTAGAAATCCAAAAGTTAAA
TAAATAAATAAAAAAAAAAAACAATTTTAATTTATTAAAAATA

---LFGHSIVGKAIWFCLYSIVIACRSVFYPLKNQSPFSMWLVANYICNITFTYVIFQWV
GVYGMTYLVLSSLMSVGFLLHPLGARWIAEHFAVTQSEQETYSTYGLINTIGFNIGYHNE
HHDFVRVPYVYLPTLTKVAHEFYKGGLKYHTSYWRVLYEFLNQDGFTFNSRVVRNPKVK*
inkkkkqf*fikn

Frame A:
---tfwtfncw*snlvlfifncncm*isflsikesitiqyvvsc*lhl*yyihlcnlpmg
wclwydlfsiikfnvcwfpftsircsldr*tfrcysirtrnlfnlwfn*yhwfqywls**
ts*frscsirlftnsh*scs*il*rws*isyfllesfi*ilksrwfhf***ss*ksks*i
nk*kkktiliy*k


Frame B:
---LFGHSIVGKAIWFCLYSIVIACRSVFYPLKNQSPFSMWLVANYICNITFTYVIFQWV
GVYGMTYLVLSSLMSVGFLLHPLGARWIAEHFAVTQSEQETYSTYGLINTIGFNIGYHNE
HHDFVRVPYVYLPTLTKVAHEFYKGGLKYHTSYWRVLYEFLNQDGFTFNSRVVRNPKVK*
inkkkkqf*fikn


Frame C:
---fldiqllvkqfgfvyiql*lhvdqfsih*rinhhsvcg*llitfvilhslm*ssngl
vfmv*li*yyqv*cllvsfyih*vlvgslnislllnqnkkliqlmv*liplvsilviimn
imisfvfhtfiyqlslkllmnsikvvlniilpigefymns*ikmvsllive*leiqklnk
*ikkknnfnllki

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSC702 (VSC702Q) /CSM/VS/VSC7-A/VSC702Q.Seq.d/                       1068   0.0
VFL545 (VFL545Q) /CSM/VF/VFL5-B/VFL545Q.Seq.d/                       1039   0.0
SFI268 (SFI268Q) /CSM/SF/SFI2-C/SFI268Q.Seq.d/                        862   0.0
CHD506 (CHD506Q) /CSM/CH/CHD5-A/CHD506Q.Seq.d/                        846   0.0
VSI477 (VSI477Q) /CSM/VS/VSI4-D/VSI477Q.Seq.d/                        835   0.0
CFI889 (CFI889Q) /CSM/CF/CFI8-D/CFI889Q.Seq.d/                        726   0.0
VFL576 (VFL576Q) /CSM/VF/VFL5-D/VFL576Q.Seq.d/                        682   0.0
CFB650 (CFB650Q) /CSM/CF/CFB6-C/CFB650Q.Seq.d/                        559   e-158
SFD743 (SFD743Q) /CSM/SF/SFD7-B/SFD743Q.Seq.d/                        274   1e-72
VSK186 (VSK186Q) /CSM/VS/VSK1-D/VSK186Q.Seq.d/                        250   2e-65

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AW968999|AW968999.1 EST381076 MAGE resequences, MAGJ Homo sapiens cDNA, mRNA sequence.    56  5e-04  1
AL547045|AL547045.2 human full-length cDNA 5-PRIME end of clone CS0DI032YJ21 of PLACENTA COT 25-NORMALIZED of Homo sapiens (human).    56  5e-04  1
BX460716|BX460716.1 human full-length cDNA 5-PRIME end of clone CS0DF017YL24 of FETAL  BRAIN of Homo sapiens (human).    56  5e-04  1
AF002668|AF002668.1 Homo sapiens putative fatty acid desaturase MLD mRNA, complete cds.    56  5e-04  1
BG105554|BG105554.1 602312177F1 NIH_MGC_84 Homo sapiens cDNA clone IMAGE:4421875 5', mRNA sequence.    56  5e-04  1
AA360802|AA360802.1 EST70001 T-cell lymphoma Homo sapiens cDNA 5' end, mRNA sequence.    56  5e-04  1
AV749604|AV749604.1 Homo sapiens cDNA clone:NPCABD09, 5'end, expressed in human pituitary.    56  5e-04  1
AV729385|AV729385.1 Homo sapiens cDNA clone:HTCATH08, 5'end, expressed in human hypothalamus.    56  5e-04  1
AL572000|AL572000.2 human full-length cDNA 3-PRIME end of clone CS0DI026YD07 of PLACENTA COT 25-NORMALIZED of Homo sapiens (human).    56  5e-04  1
BG252313|BG252313.1 602365901F1 NIH_MGC_90 Homo sapiens cDNA clone IMAGE:4473888 5', mRNA sequence.    56  5e-04  1

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP001016_279(CP001016|pid:none) Beijerinckia indica subsp. indic...   130   3e-29
CP001280_1331(CP001280|pid:none) Methylocella silvestris BL2, co...   119   6e-26
AJ938081_1(AJ938081|pid:none) Rattus norvegicus mRNA for rat sph...   116   4e-25
(Q5XIF5) RecName: Full=Sphingolipid delta(4)-desaturase DES1;   ...   116   4e-25
(Q3ZBY7) RecName: Full=Sphingolipid delta(4)-desaturase DES1;   ...   116   4e-25
(O15121) RecName: Full=Sphingolipid delta(4)-desaturase DES1;   ...   116   5e-25
(Q5RE51) RecName: Full=Sphingolipid delta(4)-desaturase DES1;   ...   116   5e-25
(O09005) RecName: Full=Sphingolipid delta(4)-desaturase DES1;   ...   115   7e-25
AK341040_1(AK341040|pid:none) Acyrthosiphon pisum ACYPI003557 mR...   107   3e-22
BT080754_1(BT080754|pid:none) Caligus clemensi clone ccle-evs-51...   106   5e-22

 psg: 0.93  gvh: 0.59  alm: 0.29  top: 0.50  tms: 0.07  mit: 0.37  mip: 0.14
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 16.0 %: cytoplasmic
	 16.0 %: mitochondrial
	 12.0 %: Golgi
	 12.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal
	  4.0 %: extracellular, including cell wall

>> prediction for VSC702 is end

>VSC702Z.Seq
----------AACTTTTTGGACATTCAATTGTTGGTAAAGCAATTTGGTTTTGTTTATAT
TCAATTGTAATTGCATGTAGATCAGTTTTCTATCCATTAAAGAATCAATCACCATTCAGT
ATGTGGTTAGTTGCTAATTACATTTGTAATATTACATTCACTTATGTAATCTTCCAATGG
GTTGGTGTTTATGGTATGACTTATTTAGTATTATCAAGTTTAATGTCTGTTGGTTTCCTT
TTACATCCATTAGGTGCTCGTTGGATCGCTGAACATTTCGCTGTTACTCAATCAGAACAA
GAAACTTATTCAACTTATGGTTTAATTAATACCATTGGTTTCAATATTGGTTATCATAAT
GAACATCATGATTTCGTTCGTGTTCCATACGTTTATTTACCAACTCTCACTAAAGTTGCT
CATGAATTCTATAAAGGTGGTCTTAAATATCATACTTCCTATTGGAGAGTTTTATATGAA
TTCTTAAATCAAGATGGTTTCACTTTTAATAGTAGAGTAGTTAGAAATCCAAAAGTTAAA
TAAATAAATAAAAAAAAAAAACAATTTTAATTTATTAAAAATA