>VSC366 (VSC366Q) /CSM/VS/VSC3-C/VSC366Q.Seq.d/
XXXXXXXXXXCCATTAGCTGATAGCAAACTTACTCTTACCATTTTTGGATCTTCTTCAAC
AATCAAACAATTTAGGCCAATTAAAGAAAGGTGCTAACGAATGTACCAAAGCCGTTTCAC
GTAGTACTGCTGAATTTGTTGTTTTAGCCGCTGATGCTGAACCATTAGAAATTTTATTAC
ACATTCCATTATTATGTGAAGATAAGAATATTCCATACGTTTTCGTTTCAAGCAAATCCG
AACTCGGTAGAGCTTGTGATGTTTCAAGACCAGTTGTTGCTTGTGCTGTTACTGTCGATG
ATAAGAGTCAATTGAAATCTCAAATCACTAACGTTAAAGATTCATTAGACAGATTATGGA
TCGTTTAAATTCGATTCATTTCATGTATTTTTTTTATAATACAAATGTGTACATATATAC
ATCAAAATTATCTAAATTTTAATTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAA
TAGATAATAATTTTTTTGTATTATTTAAATAATATCAGCTAAAATTAGTTTATTTCAACC
ACCCTTTTTTTTGAAATGGATTTTTTTAAAATAAAATTAAACTTT

---h*LIANLLLPFLDLLQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEILLH
IPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQITNVKDSLDRLWI
V*irfisciffiiqmctyihqnylnfnfffflkkkkkkkidnnffvlfk*yqlklvyfnh
pff*ngff*nkikl

Frame A:
---h*LIANLLLPFLDLLQQSNNLGQLKKGANECTKAVSRSTAEFVVLAADAEPLEILLH
IPLLCEDKNIPYVFVSSKSELGRACDVSRPVVACAVTVDDKSQLKSQITNVKDSLDRLWI
V*irfisciffiiqmctyihqnylnfnfffflkkkkkkkidnnffvlfk*yqlklvyfnh
pff*ngff*nkikl


Frame B:
---is**qtysyhfwiffnnqti*an*rkvltnvpkpfhvvllnllf*plmlnh*kfyyt
fhyyvkirifhtfsfqanpnsvelvmfqdqlllvlllsmirvn*nlksltlkih*tdygs
fkfdsfhvffl*ykcvhiyikii*iliffff*kkkkkkk*iiiflyylnnis*n*fistt
lffemdffkiklnf


Frame C:
---ladskltltifgssstikqfrpikerc*rmyqsrft*yc*iccfsr*c*tirnfith
siim*r*eysirfrfkqirtr*sl*cfktscclccycr**esieisnh*r*rfirqimdr
lnsihfmyffyntnvyiytsklskf*fffffkkkkkkknr**ffcii*iisakislfqpp
fflkwiflk*n*t

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSC366 (VSC366Q) /CSM/VS/VSC3-C/VSC366Q.Seq.d/                        809   0.0
VSA228 (VSA228Q) /CSM/VS/VSA2-B/VSA228Q.Seq.d/                        785   0.0
VSJ453 (VSJ453Q) /CSM/VS/VSJ4-C/VSJ453Q.Seq.d/                        771   0.0
VSD167 (VSD167Q) /CSM/VS/VSD1-C/VSD167Q.Seq.d/                        216   3e-55
VSK270 (VSK270Q) /CSM/VS/VSK2-C/VSK270Q.Seq.d/                         94   3e-18
AHD874 (AHD874Q) /CSM/AH/AHD8-D/AHD874Q.Seq.d/                         36   0.58
VSE660 (VSE660Q) /CSM/VS/VSE6-C/VSE660Q.Seq.d/                         36   0.58
AHD874 (AHD874Q) /CSM/AH/AHD8-D/AHD874Q.Seq.d/                         36   0.58
AFA215 (AFA215Q) /CSM/AF/AFA2-A/AFA215Q.Seq.d/                         36   0.58
VSF441 (VSF441Q) /CSM/VS/VSF4-B/VSF441Q.Seq.d/                         34   2.3

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AL402293|AL402293.1 T3 end of clone AT0AA001A10 of library AT0AA from strain CBS 4311 of Saccharomyces servazzii.    62  8e-16  3
AL402477|AL402477.1 T3 end of clone AT0AA002C09 of library AT0AA from strain CBS 4311 of Saccharomyces servazzii.    66  1e-12  2
AL404331|AL404331.1 T3 end of clone AT0AA014F06 of library AT0AA from strain CBS 4311 of Saccharomyces servazzii.    66  1e-12  2
AL402785|AL402785.1 T3 end of clone AT0AA004F05 of library AT0AA from strain CBS 4311 of Saccharomyces servazzii.    66  2e-12  2
AL404713|AL404713.1 T3 end of clone XAT0AA002A02 of library XAT0AA from strain CBS 4311  of Saccharomyces servazzii.    66  2e-12  2
CB890904|CB890904.1 taa55f09.x1 Hydra EST -III Hydra magnipapillata cDNA 3' similar to SW:NHPX_HUMAN P55769 NHP2/RS6 FAMILY PROTEIN YEL026W HOMOLOG ;, mRNA sequence.    68  8e-10  2
AL428603|AL428603.1 clone BA0AB026G04 of library BA0AB from strain CLIB 210 of  Kluyveromyces lactis.    48  2e-09  3
AL426239|AL426239.1 clone BA0AB011F04 of library BA0AB from strain CLIB 210 of  Kluyveromyces lactis.    48  2e-09  3
BZ295931|BZ295931.1 CG1763.f11 Candida glabrata Random Genomic Library Candida glabrata genomic clone CG1763, DNA sequence.    44  4e-09  3
AL396162|AL396162.1 T7 end of clone AR0AA028F01 of library AR0AA from strain CBS 732 of Zygosaccharomyces rouxii.    44  4e-08  3

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54ST0) RecName: Full=NHP2-like protein 1 homolog;                   173   3e-43
BT081700_1(BT081700|pid:none) Rana catesbeiana clone rcat-evr-53...   119   8e-26
Z83840_6(Z83840|pid:none) Human DNA sequence from clone CTA-216E...   116   5e-25
AK004489_1(AK004489|pid:none) Mus musculus 18-day embryo whole b...   116   5e-25
(P55769) RecName: Full=NHP2-like protein 1; AltName: Full=High m...   116   5e-25
AB170841_1(AB170841|pid:none) Macaca fascicularis brain cDNA clo...   116   5e-25
AF361618_1(AF361618|pid:none) Arabidopsis thaliana AT4g12600/T1P...   115   9e-25
(Q9U3Z7) RecName: Full=NHP2-like protein 1 homolog; AltName: Ful...   115   1e-24
AY086674_1(AY086674|pid:none) Arabidopsis thaliana clone 2673 mR...   114   1e-24
EF082562_1(EF082562|pid:none) Picea sitchensis clone WS0297_E17 ...   114   1e-24

 psg: 0.75  gvh: 0.66  alm: 0.37  top: 0.53  tms: 0.00  mit: 0.16  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 28.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for VSC366 is cyt

>VSC366Z.Seq
----------CCATTAGCTGATAGCAAACTTACTCTTACCATTTTTGGATCTTCTTCAAC
AATCAAACAATTTAGGCCAATTAAAGAAAGGTGCTAACGAATGTACCAAAGCCGTTTCAC
GTAGTACTGCTGAATTTGTTGTTTTAGCCGCTGATGCTGAACCATTAGAAATTTTATTAC
ACATTCCATTATTATGTGAAGATAAGAATATTCCATACGTTTTCGTTTCAAGCAAATCCG
AACTCGGTAGAGCTTGTGATGTTTCAAGACCAGTTGTTGCTTGTGCTGTTACTGTCGATG
ATAAGAGTCAATTGAAATCTCAAATCACTAACGTTAAAGATTCATTAGACAGATTATGGA
TCGTTTAAATTCGATTCATTTCATGTATTTTTTTTATAATACAAATGTGTACATATATAC
ATCAAAATTATCTAAATTTTAATTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAA
TAGATAATAATTTTTTTGTATTATTTAAATAATATCAGCTAAAATTAGTTTATTTCAACC
ACCCTTTTTTTTGAAATGGATTTTTTTAAAATAAAATTAAACTTT