AHA223
Library AH
(Link to library)
Clone ID AHA223
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U15362-1
Original site URL
Representative seq. ID
(Link to Original site)
Representative DNA sequence
>AHA223 (AHA223Q) /CSM/AH/AHA2-A/AHA223Q.Seq.d/
XXXXXXXXXXGNGAATTATTTANAATTAACTTTAAAGGNGATNTTTTCCGTAGTAATAGN
TATGNTGATTTAAAACCCCCCCAAGGNCCCCAANAAACTATTAAAATCCCTGAANGTCAT
GAACNAAACNTCNCTACTAATAATATTNATCCNAATTCNATAACTACNAATGAAAATNAT
TNNAANGAACAATTNCAACAACAACAACAACAGCAACAACAACAACAACCCCCNA
sequence update 2002. 9.10
Translated Amino Acid sequence
---ELFXINFKGDXFRSNXYXDLKPPQGPQXTIKIPEXHEXNXXTNNIXPNSITTNENXX
XEQXQQQQQQQQQQQPP


Translated Amino Acid sequence (All Frames)
Frame A:
---xiixn*l*rxxfp***xx*fktpprxpxny*np*xs*tkxxy**yxsxfxnyx*kxx
xxtixtttttatttttp


Frame B:
---ELFXINFKGDXFRSNXYXDLKPPQGPQXTIKIPEXHEXNXXTNNIXPNSITTNENXX
XEQXQQQQQQQQQQQPP


Frame C:
---nylxltlkxxfsvvixmxi*nppkxpxkllkslxvmnxtslliixixix*lxmkxix
xnnxnnnnnsnnnnnpx


Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AHA223 (AHA223Q) /CSM/AH/AHA2-A/AHA223Q.Seq.d/ 198 3e-50
AFL596 (AFL596Q) /CSM/AF/AFL5-D/AFL596Q.Seq.d/ 186 1e-46
CHR126 (CHR126Q) /CSM/CH/CHR1-B/CHR126Q.Seq.d/ 174 4e-43
CHG518 (CHG518Q) /CSM/CH/CHG5-A/CHG518Q.Seq.d/ 174 4e-43
VHL112 (VHL112Q) /CSM/VH/VHL1-A/VHL112Q.Seq.d/ 172 1e-42
CHQ734 (CHQ734Q) /CSM/CH/CHQ7-B/CHQ734Q.Seq.d/ 107 7e-23
SLA373 (SLA373Q) /CSM/SL/SLA3-D/SLA373Q.Seq.d/ 96 3e-19

own update 2009. 4. 4
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 map complement(3622543-3568102) strain AX4, complete sequence. 115 1e-42 2
X97280|X97280.1 D.discoideum mRNA for calcineurin A. 115 1e-42 2
U22397|U22397.1 Dictyostelium discoideum calcineurin mRNA, complete cds. 115 1e-42 2
AL392089|AL392089.7 Human DNA sequence from clone RP11-31F19 on chromosome 9p24.1-24.3. 40 12 1

dna update 2003.10.30
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

S68963(S68963;S74306) phosphoprotein phosphatase (EC 3.1.3.16) 3... 64 2e-09

protein update 2008.11.28
PSORT

psg: 0.75 gvh: 0.29 alm: 0.66 top: 0.53 tms: 0.00 mit: 0.13 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: nuclear
32.0 %: cytoplasmic
16.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: vesicles of secretory system

>> prediction for AHA223 is nuc

5' end seq. ID -
5' end seq. -
Length of 5' end seq. -
3' end seq. ID AHA223Z
3' end seq.
>AHA223Z.Seq
NNNNNNNNNNGNGAATTATTTANAATTAACTTTAAAGGNGATNTTTTCCGTAGTAATAGN
TATGNTGATTTAAAACCCCCCCAAGGNCCCCAANAAACTATTAAAATCCCTGAANGTCAT
GAACNAAACNTCNCTACTAATAATATTNATCCNAATTCNATAACTACNAATGAAAATNAT
TNNAANGAACAATTNCAACAACAACAACAACAGCAACAACAACAACAACCCCCNA
Length of 3' end seq. 235
Connected seq. ID -
Connected seq. -
Length of connected seq. -
Full length Seq ID -
Full length Seq. -
Length of full length seq. -