>VSB169 (VSB169Q) /CSM/VS/VSB1-C/VSB169Q.Seq.d/
XXXXXXXXXXTTAGCTTCAAATTCCGATTTCCTTGTAGCAATGGACTATGATGAGAGAAG
TCAAGTTTTTGGTGAGAAGGTGTGTACTGCTGGTGCAAATTCTTCACCCTCAAATGCCTT
GGCTGGTATAAATAATTTTACTGATTTAGGTATTAGCACTGATCAATTGGTAATGGGTTT
ACCATGGTATGGTTATATTTATAAGAATTGTTTAAATGGTGATGAAGCAGGTTTGGAAAC
TGTTGTTTGTCAAATTGAATCTGTACCATTTAGAGGTGCAAATTGTTCAGATGCAGCTGG
TTCAGAATATGATTATAGTTATTTGGTTCAATTATTACAAGATCAAACTATAAACTCTTC
TGCAGTTCAATGGAATACTGAATGGCAATCACCTTATTTTAATTATATTGACCCTATAAC
TGGTAATGTTGATCAAGTTTGGTTTGATAATCCACAATCATTATCAATTAAAGTTCAATT
AGCTCAAAAATTAAATTTAAGAGGTGTTGCAGTTTGGAATATTGATTTTTTAGATTTTTC
AGATCAATACAATTCTCGTCCAATGTGGGATGCATTAGCTTCTTTTTTCCCACAATCAGC
TTCAAGTGAACAATCATTAAATT

---ASNSDFLVAMDYDERSQVFGEKVCTAGANSSPSNALAGINNFTDLGISTDQLVMGLP
WYGYIYKNCLNGDEAGLETVVCQIESVPFRGANCSDAAGSEYDYSYLVQLLQDQTINSSA
VQWNTEWQSPYFNYIDPITGNVDQVWFDNPQSLSIKVQLAQKLNLRGVAVWNIDFLDFSD
QYNSRPMWDALASFFPQSASSEQSLN

Frame A:
---*lqipisl*qwtmmrevkflvrrcvllvqilhpqmpwlv*iilli*vlalinw*wvy
hgmvifiriv*mvmkqvwkllfvklnlyhlevqivqmqlvqnmiiviwfnyykikl*tll
qfngilngnhliliiltl*lvmlikfgliihnhyqlkfn*lkn*i*evlqfgilif*ifq
intilvqcgmh*llfshnqlqvnnh*i


Frame B:
---sfkfrfpcsngl**ekssfw*egvycwckfftlkclgwyk*fy*fry*h*signgft
mvwlyl*elfkw**srfgncclsn*icti*rcklfrcswfri*l*lfgsiitrsnyklfc
ssmey*maitlf*ly*pynw*c*sslv**stiiin*ssisskikfkrccsley*ffrffr
siqfssnvgcisfffptisfk*tiik


Frame C:
---ASNSDFLVAMDYDERSQVFGEKVCTAGANSSPSNALAGINNFTDLGISTDQLVMGLP
WYGYIYKNCLNGDEAGLETVVCQIESVPFRGANCSDAAGSEYDYSYLVQLLQDQTINSSA
VQWNTEWQSPYFNYIDPITGNVDQVWFDNPQSLSIKVQLAQKLNLRGVAVWNIDFLDFSD
QYNSRPMWDALASFFPQSASSEQSLN

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSB169 (VSB169Q) /CSM/VS/VSB1-C/VSB169Q.Seq.d/                       1215   0.0
SLE328 (SLE328Q) /CSM/SL/SLE3-B/SLE328Q.Seq.d/                       1215   0.0
VFG115 (VFG115Q) /CSM/VF/VFG1-A/VFG115Q.Seq.d/                       1189   0.0
CFC160 (CFC160Q) /CSM/CF/CFC1-C/CFC160Q.Seq.d/                       1172   0.0
VFD280 (VFD280Q) /CSM/VF/VFD2-D/VFD280Q.Seq.d/                       1168   0.0
VFD246 (VFD246Q) /CSM/VF/VFD2-B/VFD246Q.Seq.d/                       1164   0.0
VFA394 (VFA394Q) /CSM/VF/VFA3-D/VFA394Q.Seq.d/                       1120   0.0
VFB745 (VFB745Q) /CSM/VF/VFB7-B/VFB745Q.Seq.d/                        188   7e-47
VFN432 (VFN432Q) /CSM/VF/VFN4-B/VFN432Q.Seq.d/                        174   1e-42
VFN686 (VFN686Q) /CSM/VF/VFN6-D/VFN686Q.Seq.d/                        168   6e-41

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 map 1418423-1684967 strain AX4, complete sequence.   981  0.0  2
AC006793|AC006793.1 Caenorhabditis elegans clone Y50C1b, *** SEQUENCING IN PROGRESS ***, 3 unordered pieces.    40  0.11  3
AC006889|AC006889.2 Caenorhabditis elegans clone Y65B4, WORKING DRAFT SEQUENCE, 6 unordered pieces.    40  0.12  7
AC126271|AC126271.4 Mus musculus chromosome 5 clone RP23-237H9, complete sequence.    36  0.19  6
AL399574|AL399574.1 T7 end of clone AS0AA016A04 of library AS0AA from strain CLIB 533 of Saccharomyces bayanus.    46  0.52  1
AL398007|AL398007.1 T3 end of clone AS0AA006E01 of library AS0AA from strain CLIB 533 of Saccharomyces bayanus.    46  0.52  1
AX323769|AX323769.1 Sequence 257 from Patent WO0192565.           46  0.52  1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence.    36  0.95  8
AX348683|AX348683.1 Sequence 141 from Patent WO0202807.           38  0.97  2
AX345982|AX345982.1 Sequence 1053 from Patent WO0200928.          38  0.97  2

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022594_1(BC022594|pid:none) Mus musculus chitobiase, di-N-acet...   155   7e-37
(Q8R242) RecName: Full=Di-N-acetylchitobiase;          EC=3.2.1....   155   7e-37
AB168353_1(AB168353|pid:none) Macaca fascicularis testis cDNA cl...   155   1e-36
AK314640_1(AK314640|pid:none) Homo sapiens cDNA, FLJ95483, highl...   149   8e-35
BC088895_1(BC088895|pid:none) Xenopus tropicalis hypothetical LO...   148   1e-34
AY260731_1(AY260731|pid:none) Xenopus laevis putative di-N-acety...   140   3e-32
BC164759_1(BC164759|pid:none) Danio rerio chitobiase, di-N-acety...   138   1e-31
BC095064_1(BC095064|pid:none) Danio rerio chitobiase, di-N-acety...   138   1e-31
BC072723_1(BC072723|pid:none) Danio rerio chitobiase, di-N-acety...   136   4e-31
AC115592_28(AC115592|pid:none) Dictyostelium discoideum chromoso...   128   2e-28

 psg: 0.75  gvh: 0.46  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 28.0 %: nuclear
	 12.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system
	  4.0 %: endoplasmic reticulum

>> prediction for VSB169 is cyt

>VSB169Z.Seq
----------TTAGCTTCAAATTCCGATTTCCTTGTAGCAATGGACTATGATGAGAGAAG
TCAAGTTTTTGGTGAGAAGGTGTGTACTGCTGGTGCAAATTCTTCACCCTCAAATGCCTT
GGCTGGTATAAATAATTTTACTGATTTAGGTATTAGCACTGATCAATTGGTAATGGGTTT
ACCATGGTATGGTTATATTTATAAGAATTGTTTAAATGGTGATGAAGCAGGTTTGGAAAC
TGTTGTTTGTCAAATTGAATCTGTACCATTTAGAGGTGCAAATTGTTCAGATGCAGCTGG
TTCAGAATATGATTATAGTTATTTGGTTCAATTATTACAAGATCAAACTATAAACTCTTC
TGCAGTTCAATGGAATACTGAATGGCAATCACCTTATTTTAATTATATTGACCCTATAAC
TGGTAATGTTGATCAAGTTTGGTTTGATAATCCACAATCATTATCAATTAAAGTTCAATT
AGCTCAAAAATTAAATTTAAGAGGTGTTGCAGTTTGGAATATTGATTTTTTAGATTTTTC
AGATCAATACAATTCTCGTCCAATGTGGGATGCATTAGCTTCTTTTTTCCCACAATCAGC
TTCAAGTGAACAATCATTAAATT