>VSA206 (VSA206Q) /CSM/VS/VSA2-A/VSA206Q.Seq.d/
GGGATCCAGTTGAATATGATGTTTTAATTGATTACTTGGGTCAAAATCAAGATAAATGGT
TTTCTGGTGGTTTACCATGAAAATAATAATAATAATAATAATAATAATTATATAAATTAC
ATAAAGGTTTCACTATTGGTGTTTTAATCCTGGTATAAATAAAATTCTAAAAATAAAAAA
TAAAAAACTATATAAAAATTA

giqlnmmf*LITWVKIKINGFLVVYHENNNNNNNNNYINYIKVSLLVF*swyk*nsknkk
*kti*kl

Frame A:
giqlnmmf*LITWVKIKINGFLVVYHENNNNNNNNNYINYIKVSLLVF*swyk*nsknkk
*kti*kl


Frame B:
gss*i*cfn*llgsksr*mvfwwftmkiiiiiiiiii*it*rfhywcfnpginkilkikn
kklykn


Frame C:
dpveydvlidylgqnqdkwfsgglp*k********lyklhkgftigvlilv*ikf*k*ki
knyiki

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

VSK377 (VSK377Q) /CSM/VS/VSK3-D/VSK377Q.Seq.d/                        161   5e-39
VSJ788 (VSJ788Q) /CSM/VS/VSJ7-D/VSJ788Q.Seq.d/                        161   5e-39
VSJ730 (VSJ730Q) /CSM/VS/VSJ7-B/VSJ730Q.Seq.d/                        161   5e-39
VSI729 (VSI729Q) /CSM/VS/VSI7-B/VSI729Q.Seq.d/                        161   5e-39
VSI304 (VSI304Q) /CSM/VS/VSI3-A/VSI304Q.Seq.d/                        161   5e-39
VSI168 (VSI168Q) /CSM/VS/VSI1-C/VSI168Q.Seq.d/                        161   5e-39
VSF487 (VSF487Q) /CSM/VS/VSF4-D/VSF487Q.Seq.d/                        161   5e-39
VSF255 (VSF255Q) /CSM/VS/VSF2-C/VSF255Q.Seq.d/                        161   5e-39
VSF188 (VSF188Q) /CSM/VS/VSF1-D/VSF188Q.Seq.d/                        161   5e-39
VSE526 (VSE526Q) /CSM/VS/VSE5-B/VSE526Q.Seq.d/                        161   5e-39

                                                               Score     E
Sequences producing significant alignments:                    (bits)  Value  N

U48706|U48706.1 Dictyostelium discoideum small aggregate formation (smlA) gene, complete cds.   161  1e-56  2
AC009749|AC009749.8 Drosophila melanogaster, chromosome 2L, region 25B-25C, BAC clone BACR40I04, complete sequence.    42  2.4  1
AC017189|AC017189.1 Drosophila melanogaster, WORKING DRAFT SEQUENCE, in ordered pieces.    42  2.4  1
AE003575|AE003575.4 Drosophila melanogaster chromosome 2L section 16 of 83 of the complete sequence.    42  2.4  1
AC009845|AC009845.7 Drosophila melanogaster, chromosome 2L, region 25A-25B, BAC clone BACR04C19, complete sequence.    42  2.4  1
AC106969|AC106969.5 Rattus norvegicus clone CH230-18J4, *** SEQUENCING IN PROGRESS ***, 1 ordered piece.    40  3.1  2
AC016930|AC016930.14 Homo sapiens 3 BAC RP11-781E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence.    36  4.3  2
AC068859|AC068859.2 Homo sapiens chromosome 11 clone RP11-167F9 map 11, WORKING DRAFT SEQUENCE, 16 unordered pieces.    34  5.4  2
AC098292|AC098292.5 Rattus norvegicus clone CH230-1L21, WORKING DRAFT SEQUENCE, 2 unordered pieces.    40  8.1  3
AC114365|AC114365.5 Rattus norvegicus clone CH230-124C11, WORKING DRAFT SEQUENCE, 1 ordered piece.    36  9.2  3

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 225,703,809

 psg: 0.86  gvh: 0.17  alm: 0.43  top: 0.43  tms: 0.00  mit: 0.21  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 40.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: Golgi

>> prediction for VSA206 is cyt

>VSA206E.Seq
GGGATCCAGTTGAATATGATGTTTTAATTGATTACTTGGGTCAAAATCAAGATAAATGGT
TTTCTGGTGGTTTACCATGAAAATAATAATAATAATAATAATAATAATTATATAAATTAC
ATAAAGGTTTCACTATTGGTGTTTTAATCCTGGTATAAATAAAATTCTAAAAATAAAAAA
TAAAAAACTATATAAAAATTA