AFO869
Library AF
(Link to library)
Clone ID AFO869
Atlas ID -
NBRP ID -
dictyBase ID -
Link to Contig Contig-U16252-1
Original site URL
Representative seq. ID AFO869P
(Link to Original site)
Representative DNA sequence
>AFO869 (AFO869Q) /CSM/AF/AFO8-C/AFO869Q.Seq.d/
ACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAA
ATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCT
TTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATC
AACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAA
AGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAA
ATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAA
TAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGG
TGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAAT
GAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATAAATT
AGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAATGAAGCCTATCG
TATGGGTTCAGAAGTTTATCATAACTTAAAGAATGTCATCAGTGGTAGATACXXXXXXXX
XXANAATTCATTAAANAANATCCNATCNTTTCAATTNAANATCCNTTTGATCAANATGAT
TGGGAATCATACCCTNAATTAACAGCNTCAGTTGANATTCNAANTGTTGGNGATGATTTA
CTTGNTACCNACCCANAAAAAATTAANACTGGNATTNAAAAAAAAGCATGTAANGCTNTT
TTATTAAAAGTTAACCNAATTGGNTCAGNCNCTGAANCNANTNGNGCCGCTCTTGACNCA
AANAANGCNTCATGGGGNGTCANGGNTAGCCNTCGNTCAGGTGAAACTGAANANACCNTC
NNTGCTGANTTAGNTGTTGGNTTAGGGACCGGNCNAANTAAAACTGGNGCNCCNTGTANA
TCANAAANATTAG
sequence update 2001. 6. 1
Translated Amino Acid sequence
LYFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGAS
TGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPN
KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGNKL
AMQEFMILPVGAKDFNEAYRMGSEVYHNLKNVISGRY---

---XFIKXXPIXSIXXPFDQXDWESYPXLTASVXIXXVGDDLLXTXPXKIXTGIXKKACX
AXLLKVNXIGSXXEXXXAALDXXXASWGVXXSXRSGETEXTXXAXLXVGLGTGXXKTGAP
CXSXXL


Translated Amino Acid sequence (All Frames)
Frame A:
tlfffisiyiyiif*nerhqin*sqrnfrftw*pnc*s*plhrkrwccfiiqscssirci
nwyl*sc*ikrw**ikilr*rctqsnqkhsrshstsrhw*isfrsscyr*indrsrwypk
*r*ircqrypcsqfsclqswcc**kfttlqiylrncry*neitsssiqcyqwwftcr**i
syariydftswc*rfq*slsygfrsls*lkechqw*i---

---xih*xxsxxfnxxsx*sx*lgiipxinsxs*xsxcwx*ftxyxpxkn*xwxxkksm*
xxfiks*pnwxxx*xxxxrs*xkxxxmgxxg*psxr*n*xxxxc*xxcwxrdrxx*nwxx
xxixxi

Frame B:
LYFFLSLSIYISFFKMSVIKSIKAREILDSRGNPTVEVDLYTEKDGVVSSFRAAVPSGAS
TGIYEAVELRDGDKSRYLGKGVLKAIKNILEVIQPAVIGKSVSDQAAIDKLMIDLDGTPN
KGKLGANAILAVSLAVCRAGAADRNLPLYKYISEIAGTKMRLPVPAFNVINGGSHAGNKL
AMQEFMILPVGAKDFNEAYRMGSEVYHNLKNVISGRY---

---XFIKXXPIXSIXXPFDQXDWESYPXLTASVXIXXVGDDLLXTXPXKIXTGIXKKACX
AXLLKVNXIGSXXEXXXAALDXXXASWGVXXSXRSGETEXTXXAXLXVGLGTGXXKTGAP
CXSXXL

Frame C:
fiffylylyiyhflk*assnqlkpekf*ihvvtqllkltftpkkmvlfhhselqfhqvhq
lvfmklln*emvinqdt*vkvyskqsktfsksfnqpslvnqfpikllsin**sismvpqi
kvn*vptlslqsv*lfaelvllieiyhftnisqklqvlk*dyqfqhsmlsmvvhmqvin*
lcknl*fyqlvlkismkpivwvqkfiit*rmssvvd---

---nslxxixsfqxxixlixmignhtln*qxqlxfxxlxmiylxptxkklxlxxkkkhvx
lfy*kltxlxqxlxxxxplltqxxxhgxsxxaxxqvklxxpsxlx*xlx*gpxxxklxxx
vxxkx*

Homology vs CSM-cDNA

Score E
Sequences producing significant alignments: (bits) Value

AFO869 (AFO869Q) /CSM/AF/AFO8-C/AFO869Q.Seq.d/ 1556 0.0
VFB851 (VFB851Q) /CSM/VF/VFB8-C/VFB851Q.Seq.d/ 1263 0.0
SSM734 (SSM734Q) /CSM/SS/SSM7-B/SSM734Q.Seq.d/ 1263 0.0
SFH339 (SFH339Q) /CSM/SF/SFH3-B/SFH339Q.Seq.d/ 1263 0.0
AFO860 (AFO860Q) /CSM/AF/AFO8-C/AFO860Q.Seq.d/ 1263 0.0
AFE445 (AFE445Q) /CSM/AF/AFE4-B/AFE445Q.Seq.d/ 1263 0.0
AFD204 (AFD204Q) /CSM/AF/AFD2-A/AFD204Q.Seq.d/ 1263 0.0
AFG235 (AFG235Q) /CSM/AF/AFG2-B/AFG235Q.Seq.d/ 1255 0.0
SLA770 (SLA770Q) /CSM/SL/SLA7-C/SLA770Q.Seq.d/ 1251 0.0
SFC211 (SFC211Q) /CSM/SF/SFC2-A/SFC211Q.Seq.d/ 1239 0.0

own update 2004.12.25
Homology vs DNA

Score E
Sequences producing significant alignments: (bits) Value N

BI504877|BI504877.1 BB170011A20G10.5 Bee Brain Normalized/Subtracted Library, BB17 Apis mellifera cDNA clone BB170011A20G10 5', mRNA sequence. 125 4e-31 2
Y17298|Y17298.1 Cunninghamella elegans mRNA for enolase. 86 2e-30 6
BD183625|BD183625.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 62 8e-29 5
BD183626|BD183626.1 Material for diagnosing malaria and immune antigen for suppressing growth of plasmodium. 62 8e-29 5
AB026051|AB026051.1 Plasmodium falciparum mRNA for enolase, complete cds. 62 8e-29 5
U00152|U00152.1 Plasmodium falciparum enolase gene complete cds. 62 2e-27 4
AX619982|AX619982.1 Sequence 2945 from Patent WO02094868. 50 4e-27 6
BD237140|BD237140.1 Staphylococcus aureus gene and polypeptide. 50 7e-27 6
AR282358|AR282358.1 Sequence 21 from patent US 6521441. 50 7e-27 6
AF065394|AF065394.1 Staphylococcus aureus enolase (eno) gene, complete cds. 50 7e-27 6
dna update 2003. 9.18
Homology vs Protein

Score E
Sequences producing significant alignments: (bits) Value

(Q54RK5) RecName: Full=Enolase A; EC=4.2.1.11; AltName:... 391 e-107
BC045082_1(BC045082|pid:none) Xenopus laevis enolase 3, beta mus... 275 1e-72
BC096516_1(BC096516|pid:none) Xenopus tropicalis hypothetical pr... 275 2e-72
EF137905_1(EF137905|pid:none) Helianthus annuus plastid enolase ... 274 4e-72
DQ497988_1(DQ497988|pid:none) Polypterus senegalus enolase B mRN... 273 5e-72
DQ497989_1(DQ497989|pid:none) Typhlonectes natans enolase B mRNA... 273 7e-72
DQ497985_1(DQ497985|pid:none) Polypterus senegalus enolase A mRN... 271 2e-71
(Q9W7L0) RecName: Full=Alpha-enolase; EC=4.2.1.11; AltN... 271 2e-71
BC054169_1(BC054169|pid:none) Xenopus laevis enolase 1, alpha, m... 271 3e-71
AC016662_10(AC016662|pid:none) Arabidopsis thaliana chromosome 1... 271 3e-71
protein update 2009. 4.26
PSORT

psg: 0.93 gvh: 0.46 alm: 0.33 top: 0.60 tms: 0.00 mit: 0.34 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
16.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for AFO869 is cyt

5' end seq. ID AFO869F
5' end seq.
>AFO869F.Seq
ACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAA
ATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCT
TTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATC
AACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAA
AGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAA
ATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAA
TAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGG
TGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAAT
GAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATAAATT
AGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAATGAAGCCTATCG
TATGGGTTCAGAAGTTTATCATAACTTAAAGAATGTCATCAGTGGTAGATAC--------
--
Length of 5' end seq. 652
3' end seq. ID AFO869Z
3' end seq.
>AFO869Z.Seq
----------ANAATTCATTAAANAANATCCNATCNTTTCAATTNAANATCCNTTTGATC
AANATGATTGGGAATCATACCCTNAATTAACAGCNTCAGTTGANATTCNAANTGTTGGNG
ATGATTTACTTGNTACCNACCCANAAAAAATTAANACTGGNATTNAAAAAAAAGCATGTA
ANGCTNTTTTATTAAAAGTTAACCNAATTGGNTCAGNCNCTGAANCNANTNGNGCCGCTC
TTGACNCAAANAANGCNTCATGGGGNGTCANGGNTAGCCNTCGNTCAGGTGAAACTGAAN
ANACCNTCNNTGCTGANTTAGNTGTTGGNTTAGGGACCGGNCNAANTAAAACTGGNGCNC
CNTGTANATCANAAANATTAG
Length of 3' end seq. 371
Connected seq. ID AFO869P
Connected seq.
>AFO869P.Seq
ACTTTATTTTTTTTTATCTCTATCTATATATATATCATTTTTTAAAATGAGCGTCATCAA
ATCAATTAAAGCCAGAGAAATTTTAGATTCACGTGGTAACCCAACTGTTGAAGTTGACCT
TTACACCGAAAAAGATGGTGTTGTTTCATCATTCAGAGCTGCAGTTCCATCAGGTGCATC
AACTGGTATTTATGAAGCTGTTGAATTAAGAGATGGTGATAAATCAAGATACTTAGGTAA
AGGTGTACTCAAAGCAATCAAAAACATTCTCGAAGTCATTCAACCAGCCGTCATTGGTAA
ATCAGTTTCCGATCAAGCTGCTATCGATAAATTAATGATCGATCTCGATGGTACCCCAAA
TAAAGGTAAATTAGGTGCCAACGCTATCCTTGCAGTCAGTTTAGCTGTTTGCAGAGCTGG
TGCTGCTGATAGAAATTTACCACTTTACAAATATATCTCAGAAATTGCAGGTACTAAAAT
GAGATTACCAGTTCCAGCATTCAATGTTATCAATGGTGGTTCACATGCAGGTAATAAATT
AGCTATGCAAGAATTTATGATTTTACCAGTTGGTGCTAAAGATTTCAATGAAGCCTATCG
TATGGGTTCAGAAGTTTATCATAACTTAAAGAATGTCATCAGTGGTAGATAC--------
--ANAATTCATTAAANAANATCCNATCNTTTCAATTNAANATCCNTTTGATCAANATGAT
TGGGAATCATACCCTNAATTAACAGCNTCAGTTGANATTCNAANTGTTGGNGATGATTTA
CTTGNTACCNACCCANAAAAAATTAANACTGGNATTNAAAAAAAAGCATGTAANGCTNTT
TTATTAAAAGTTAACCNAATTGGNTCAGNCNCTGAANCNANTNGNGCCGCTCTTGACNCA
AANAANGCNTCATGGGGNGTCANGGNTAGCCNTCGNTCAGGTGAAACTGAANANACCNTC
NNTGCTGANTTAGNTGTTGGNTTAGGGACCGGNCNAANTAAAACTGGNGCNCCNTGTANA
TCANAAANATTAG
Length of connected seq. 1023
Full length Seq ID -
Full length Seq. -
Length of full length seq. -